1
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Gale DK, Rorrer GL. Enhanced Photoluminescence Detection of Immunocomplex Formation by Antibody-Functionalized, Ge-Doped Biosilica from the Diatom Cyclotella sp. NANOMATERIALS (BASEL, SWITZERLAND) 2023; 13:1950. [PMID: 37446467 DOI: 10.3390/nano13131950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Revised: 06/22/2023] [Accepted: 06/23/2023] [Indexed: 07/15/2023]
Abstract
Diatoms are single-celled algae that biosynthesize cell walls of biogenic silica called "frustules" that are intricately patterned at the submicron- and nanoscale. In this study, we amplified the intrinsic luminescent properties of antibody-functionalized diatom biosilica frustules for enhanced, label-free, photoluminescence (PL) detection of immunocomplex formation. It was hypothesized that metabolically doped GeO centers in antibody-functionalized diatom biosilica would enhance PL emission associated with nucleophilic immunocomplex formation. Germanium (Ge) was metabolically inserted into the frustule biosilica by two-stage cell cultivation of the centric diatom Cyclotella sp. The biosilica frustules were isolated by hydrogen peroxide treatment and thermally annealed to convert Ge oxides in the biosilica (0.4 wt% Ge) to luminescent GeO centers. The Ge-doped biosilica frustules were then functionalized with Rabbit Immunoglobulin G (IgG). Upon immunocomplex formation with its complimentary antigen goat anti-Rabbit IgG, the Ge-oxide doped, antibody-functionalized frustule biosilica increased the intensity of PL emission by a factor of 2.6 relative to immunocomplex formation by antibody-functionalized frustule biosilica without Ge. It is proposed that the luminescent GeO centers in the Ge-oxide doped frustule biosilica were more sensitive to radiative recombination than luminescent silanol groups in frustule biosilica without Ge, resulting in a higher PL emission upon immunocomplex formation.
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Affiliation(s)
- Debra K Gale
- School of Chemical, Biological, and Environmental Engineering, Oregon State University, Corvallis, OR 97331, USA
| | - Gregory L Rorrer
- School of Chemical, Biological, and Environmental Engineering, Oregon State University, Corvallis, OR 97331, USA
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2
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Ozkan A. Screening diatom strains belonging to Cyclotella genera for chitin nanofiber production under photobioreactor conditions: Chitin productivity and characterization of physicochemical properties. ALGAL RES 2023. [DOI: 10.1016/j.algal.2023.103015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
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3
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A Comparative Analysis of Chemical, Plasma and In Situ Modification of Graphene Nanoplateletes for Improved Performance of Fused Filament Fabricated Thermoplastic Polyurethane Composites Parts. Polymers (Basel) 2022; 14:polym14235182. [PMID: 36501577 PMCID: PMC9735986 DOI: 10.3390/polym14235182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 11/13/2022] [Accepted: 11/23/2022] [Indexed: 12/05/2022] Open
Abstract
The limited number of materials and mechanical weakness of fused deposition modeling (FDM) parts are deficiencies of FDM technology. The preparation of polymer composites parts with suitable filler is a promising method to improve the properties of the 3D printed parts. However, the agglomerate of filler makes its difficult disperse in the matrix. In this work, graphene nanoplatelets (GnPs) were surface modified with chemical, low-temperature plasma and in situ methods, in order to apply them as fillers for thermoplastic polyurethane (TPU). Following its modification, the surface chemical composition of GnPs was analyzed. Three wt% of surface-modified GnPs were incorporated into TPU to produce FDM filaments using a melting compounding process. Their effects on rheology properties and electrical conductivity on TPU/GnPs composites, as well as the dimensional accuracy and mechanical properties of FDM parts, are compared. The images of sample facture surfaces were examined by scanning electron microscope (SEM) to determine the dispersion of GnPs. Results indicate that chemical treatment of GnPs with zwitterionic surfactant is a good candidate to significantly enhance TPU filaments, when considering the FDM parts demonstrated the highest mechanical properties and lowest dimensional accuracy.
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4
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Cao Z, Su C, Sun X, Shao K, Wang X, Mu Y, Chen X, Feng C. Enhanced mechanical properties of hydroxybutyl chitosan hydrogel through anchoring interface effects of diatom biosilica. Carbohydr Polym 2022; 296:119975. [DOI: 10.1016/j.carbpol.2022.119975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 07/21/2022] [Accepted: 08/10/2022] [Indexed: 11/02/2022]
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5
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Chen T, Wu F, Li Y, Rozan HE, Chen X, Feng C. Gold Nanoparticle-Functionalized Diatom Biosilica as Label-Free Biosensor for Biomolecule Detection. Front Bioeng Biotechnol 2022; 10:894636. [PMID: 35711633 PMCID: PMC9195615 DOI: 10.3389/fbioe.2022.894636] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2022] [Accepted: 04/21/2022] [Indexed: 11/24/2022] Open
Abstract
Diatom biosilica (DBs) is the cell wall of natural diatom called frustule, which is made of porous hydrogenated amorphous silica possessing periodic micro- to nanoscale features. In this study, a simple, sensitive, and label-free photoluminescence (PL) immune-detection platform based on functionalized diatom frustules was developed. Gold nanoparticles (AuNPs) deposited on poly-dopamine-coated diatom frustules via in situ deposition which considerably decreased the intrinsic blue PL intensity of diatom biosilica. Then, goat anti-rabbit immunoglobulin G (IgG) was added to functionalize diatom biosilica-poly-dopamine-AuNPs (DBs-PDA-AuNPs). PL studies revealed that the specific binding with antigen rabbit IgG increased the peak intensity of PL in comparison with the non-complimentary antigen (human IgG). The enhancement in PL intensity of DBs-PDA had a linear correlation with antigen (rabbit IgG) concentration, whose limit of detection (LOD) reached 8 × 10-6 mg/ml. Furthermore, PL detection based on DBs-PDA-AuNPs showed a high detection sensitivity with the LOD as low as 8 × 10-9 mg/ml and spread over almost eight orders of magnitude, making it suitable for the sensitive quantitative analysis of immune complex compared with traditional fluorescence immunoassay. Hence, the study proves that the AuNP-functionalized diatom frustules can serve as an effective biosensor platform for label-free PL-based immunoassay.
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Affiliation(s)
- Tongtong Chen
- College of Marine Life Science, Ocean University of China, Qingdao, China
| | - Feifei Wu
- College of Marine Life Science, Ocean University of China, Qingdao, China
| | - Yang Li
- College of Life Sciences, Qingdao University, Qingdao, China
| | - Hussein E Rozan
- College of Marine Life Science, Ocean University of China, Qingdao, China.,Department of Biochemistry, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Xiguang Chen
- College of Marine Life Science, Ocean University of China, Qingdao, China.,Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
| | - Chao Feng
- College of Marine Life Science, Ocean University of China, Qingdao, China
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6
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Investigating the Morphology and Mechanics of Biogenic Hierarchical Materials at and below Micrometer Scale. NANOMATERIALS 2022; 12:nano12091549. [PMID: 35564259 PMCID: PMC9102398 DOI: 10.3390/nano12091549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 04/26/2022] [Accepted: 04/30/2022] [Indexed: 12/10/2022]
Abstract
Investigating and understanding the intrinsic material properties of biogenic materials, which have evolved over millions of years into admirable structures with difficult to mimic hierarchical levels, holds the potential of replacing trial-and-error-based materials optimization in our efforts to make synthetic materials of similarly advanced complexity and properties. An excellent example is biogenic silica which is found in the exoskeleton of unicellular photosynthetic algae termed diatoms. Because of the complex micro- and nanostructures found in their exoskeleton, determining the intrinsic mechanical properties of biosilica in diatoms has only partly been accomplished. Here, a general method is presented in which a combination of in situ deformation tests inside an SEM with a realistic 3D model of the frustule of diatom Craspedostauros sp. (C. sp.) obtained by electron tomography, alongside finite element method (FEM) simulations, enables quantification of the Young’s modulus (E = 2.3 ± 0.1 GPa) of this biogenic hierarchical silica. The workflow presented can be readily extended to other diatom species, biominerals, or even synthetic hierarchical materials.
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7
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Rabiee N, Khatami M, Jamalipour Soufi G, Fatahi Y, Iravani S, Varma RS. Diatoms with Invaluable Applications in Nanotechnology, Biotechnology, and Biomedicine: Recent Advances. ACS Biomater Sci Eng 2021; 7:3053-3068. [PMID: 34152742 DOI: 10.1021/acsbiomaterials.1c00475] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Diatoms are unicellular microalga found in soil and almost every aquatic environment (marine and fresh water). Biogenic silica and diatoms are attractive for biotechnological and industrial applications, especially in the field of biomedicine, industrial/synthetic manufacturing processes, and biomedical/pharmaceutical sciences. Deposition of silica by diatoms allows them to create micro- or nanoscale structures which may be utilized in nanomedicine and especially in drug/gene delivery. Diatoms with their unique architectures, good thermal stability, suitable surface area, simple chemical functionalization/modification procedures, ease of genetic manipulations, optical/photonic characteristics, mechanical resistance, and eco-friendliness, can be utilized as smart delivery platforms. The micro- to nanoscale properties of the diatom frustules have garnered a great deal of attention for their application in diverse areas of nanotechnology and biotechnology, such as bioimaging/biosensing, biosensors, drug/gene delivery, photodynamic therapy, microfluidics, biophotonics, solar cells, and molecular filtrations. Additionally, the genetically engineered diatom microalgae-derived nanoporous biosilica have enabled the targeted anticancer drug delivery to neuroblastoma and B-lymphoma cells as well as the mouse xenograft model of neuroblastoma. In this perspective, current trends and recent advances related to the applications of diatoms for the synthesis of nanoparticles, gene/drug delivery, biosensing determinations, biofuel production, and remediation of heavy metals are deliberated, including the underlying significant challenges and future perspectives.
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Affiliation(s)
- Navid Rabiee
- Department of Chemistry, Sharif University of Technology, Tehran, Iran
| | - Mehrdad Khatami
- Noncommunicable Diseases Research Center, Bam University of Medical Sciences, Bam, Iran.,Cell Therapy and Regenerative Medicine Comprehensive Center, Kerman University of Medical Sciences, Kerman, Iran
| | | | - Yousef Fatahi
- Department of Pharmaceutical Nanotechnology, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran.,Nanotechnology Research Centre, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Siavash Iravani
- Faculty of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan 81746-73461, Iran
| | - Rajender S Varma
- Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute, Palacky University in Olomouc, Slechtitelu 27, 783 71, Olomouc, Czech Republic
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8
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Shafiei N, Nasrollahzadeh M, Iravani S. Green Synthesis of Silica and Silicon Nanoparticles and Their Biomedical and Catalytic Applications. COMMENT INORG CHEM 2021. [DOI: 10.1080/02603594.2021.1904912] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Nasrin Shafiei
- Department of Chemistry, Faculty of Science, University of Qom, Qom, Iran
| | | | - Siavash Iravani
- Faculty of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
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9
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Diatoms decorated with gold nanoparticles by In-situ and Ex-situ methods for in vitro gentamicin release. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2021; 123:112018. [PMID: 33812636 DOI: 10.1016/j.msec.2021.112018] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 03/03/2021] [Accepted: 03/05/2021] [Indexed: 11/24/2022]
Abstract
The use of natural diatoms is currently a topic of interest for therapeutic applications due to its facilities, low cost, and biocompatibility. Here, we report the chemical modification of diatoms Aulacoseria genus microalgae-derived biosilica from Guayllabamba - Ecuador decorated with gold nanoparticles by In-situ and Ex-situ methods to study the in vitro gentamicin loading and release properties in simulated body fluid (SBF). Successful decoration of the diatoms and loaded with gentamicin was confirmed using Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM), Raman spectroscopy and Fluorescence Microscopy. We follow the In-vitro drug release by using Ultraviolet-Visible Spectroscopy (UV-vis). Our results revealed that diatoms decorated with gold nanoparticles using the Ex-situ method (Au/CTAB-Diatom) showed a faster release reaching a maximum of 93% in 10 days and a lower loading rate, while the samples decorated by the In-situ method presented longer and slower release behavior. Fluorescence properties were enhanced after the gentamicin loaded. The advantage of this work is the control of the structural and optical properties of diatoms decorated with gold nanoparticles for the gentamicin drug delivery.
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10
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Mishra M, Singh SK, Bhardwaj A, Kumar L, Singh MK, Sundaram S. Development of a Diatom-Based Photoluminescent Immunosensor for the Early Detection of Karnal Bunt Disease of Wheat Crop. ACS OMEGA 2020; 5:8251-8257. [PMID: 32309735 PMCID: PMC7161024 DOI: 10.1021/acsomega.0c00551] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Accepted: 03/20/2020] [Indexed: 06/11/2023]
Abstract
In India, the major crop is wheat. Its production is severely hampered by seed-borne diseases such as smut and bunt which are responsible for the reduction of crop yield with poor grain quality. In the current study, an attempt was made to prepare a photoluminescence (PL)-based immunosensor for early detection of Karnal bunt (KB) disease. The KB disease-causing pathogen Tilletia indica was detected using functionalized diatom frustules as a sensing platform. The teliospore-covered platform, on exposure to light, showed enhanced intensity of PL in comparison to control. This response was directly proportional to the concentration of spores. For the development of a stable frustule-based immunosensor platform, gluteraldehyde was added for the covalent immobilization of the T. indica antibody onto amine-functionalized diatom substrates. Frustules of diatom consisting of a nanoporous three-dimensional biogenic silica material exhibit a unique property of emitting strong, visible blue PL under ultraviolet (UV) excitation. PL studies were done to reveal the specificity and binding of the conjugated diatom platform that will distinguish between the T. indica (complementary) and A. niger (noncomplementary) antigens. Four times better intensity of PL was observed against the complementary one in comparison to a noncomplementary setup (control). The immunocomplex frustule-based platform serves as a suitable sensor platform for early detection of KB.
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Affiliation(s)
- Manjita Mishra
- Centre
of Biotechnology, University of Allahabad, Prayagraj 211002, Uttar Pradesh, India
| | - Shailendra Kumar Singh
- Centre
of Biotechnology, University of Allahabad, Prayagraj 211002, Uttar Pradesh, India
| | - Abhishek Bhardwaj
- Department
of Environmental Science, Veer Bahadur Singh
Purvanchal University, Jaunpur 222001, India
| | - Lokendra Kumar
- Department
of Physics, University of Allahabad, Prayagraj 211002, Uttar Pradesh, India
| | - Manoj Kumar Singh
- Centre
of Material Sciences, University of Allahabad, Prayagraj 211002, Uttar Pradesh, India
| | - Shanthy Sundaram
- Centre
of Biotechnology, University of Allahabad, Prayagraj 211002, Uttar Pradesh, India
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11
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Moon H, Lee YC, Hur J. One-Pot Decoration of Cupric Oxide on Activated Carbon Fibers Mediated by Polydopamine for Bacterial Growth Inhibition. MATERIALS 2020; 13:ma13051158. [PMID: 32151011 PMCID: PMC7085197 DOI: 10.3390/ma13051158] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Revised: 03/04/2020] [Accepted: 03/04/2020] [Indexed: 11/16/2022]
Abstract
Despite the widespread application of activated carbon fiber (ACF) filters in air cleaning owing to their high surface area and low price, they have certain limitations in that they facilitate bacterial growth upon prolonged use as ACF filters can provide favorable conditions for bacterial survival. The deposition of cupric oxide (CuO) on ACFs can be an effective way of resolving this problem because CuO can inhibit the proliferation of bacteria owing to its antimicrobial properties. However, finding a new method that allows the simple and uniform coating of CuO on ACF filters is challenging. Here, we demonstrate one-pot CuO deposition mediated by polydopamine (PD) to realize an ACF filter with antimicrobial activity. Scanning electron microscopy (SEM), energy dispersive X-ray spectroscopy (EDS), and X-ray photoelectron spectroscopy (XPS) analyses reveal that CuO and PD are uniformly deposited on the ACF surface. The amount of CuO formed on the ACFs is measured by thermogravimetric analysis (TGA). Finally, the changes in surface area, pressure drop, and antimicrobial activity after coating PD-CuO on the ACFs are evaluated. The use of PD-CuO on the ACFs effectively suppresses the growth of bacteria and enhances the mechanical properties without significantly sacrificing the original characteristics of the ACF filter.
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Affiliation(s)
- Hangil Moon
- Department of Chemical and Biological Engineering, Gachon University, Seongnam-si, Gyeonggi-do 13120, Korea;
| | - Young-Chul Lee
- Department of BioNano Technology, Gachon University, Seongnam-si, Gyeonggi-do 13120, Korea
- Correspondence: (Y.-C.L.); (J.H.); Tel.: +82-31-750-8751 (Y.-C.L.); +82-10-750-5593 (J.H.)
| | - Jaehyun Hur
- Department of Chemical and Biological Engineering, Gachon University, Seongnam-si, Gyeonggi-do 13120, Korea;
- Correspondence: (Y.-C.L.); (J.H.); Tel.: +82-31-750-8751 (Y.-C.L.); +82-10-750-5593 (J.H.)
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12
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An enhanced recyclable 3D adsorbent for diverse bio-applications using biocompatible magnetic nanomulberry and cucurbituril composites. Sci Rep 2020; 10:443. [PMID: 31949259 PMCID: PMC6965109 DOI: 10.1038/s41598-019-57336-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Accepted: 12/26/2019] [Indexed: 12/20/2022] Open
Abstract
Herein, we describe the synthesis of highly water-dispersible and biocompatible 3D adsorbents via a rapid two-step strategy employing a mesoporous magnetic nanomulberry-shaped Fe3O4 (MNM) on diatomaceous earth (DE) and cucurbituril (CB; MNM-DE-CB). Coating of CB on the surface of MNM-DE via hydrogen bonds not only enhanced the dispersibility of CB, but also improved the stability of MNM-DE. The ability of the adsorbent to remove dyes from water was investigated as a function of metal ions, solution pH, temperature, and concentration to determine optimum reaction conditions. Unlike MNM-DE, MNM-DE-CB exhibited highly efficient, rapid dye removal and recyclability in aqueous solution, and low cytotoxicity toward cancer cells in drug delivery tests. MNM-DE-CB is a promising green adsorbent with potential for diverse applications including water remediation, interface catalysis, bio-sample preparation, and drug delivery.
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13
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Rea I, De Stefano L. Recent Advances on Diatom-Based Biosensors. SENSORS (BASEL, SWITZERLAND) 2019; 19:E5208. [PMID: 31795066 PMCID: PMC6929068 DOI: 10.3390/s19235208] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 11/12/2019] [Accepted: 11/20/2019] [Indexed: 01/09/2023]
Abstract
Porous materials showing some useful transducing features, i.e., any changes in their physical or chemical properties as a consequence of molecular interaction, are very attractive in the realization of sensors and biosensors. Diatom frustules have been gaining support for biosensors since they are made of nanostructured amorphous silica, but do not require any nano-fabrication step; their surface can be easily functionalized and customized for specific application; diatom frustules are photoluminescent, and they can be found in almost every pond of water on the Earth, thus assuring large and low-cost availability. In this review, the most recent advances in diatom-based biosensors are reported, and a perspective view on future developments is given.
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Affiliation(s)
| | - Luca De Stefano
- Institute for Microelectronics and Microsystems, National Research Council, Via P. Castellino 111, 80131 Napoli, Italy;
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14
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Selvaraj V, Muthukumar A, Nagamony P, Chinnuswamy V. Detection of typhoid fever by diatom-based optical biosensor. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:20385-20390. [PMID: 28577141 DOI: 10.1007/s11356-017-9362-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2017] [Accepted: 05/23/2017] [Indexed: 06/07/2023]
Abstract
Surface-modified diatom substrates are employed for the development of immunocomplex-based optical biosensor for diagnosis of typhoid. Biosensor has been prepared by covalent immobilization of Salmonella typhi antibody onto the crosslinked diatom substrates via glutaraldehyde. Photoluminescent (PL) studies revealed good specificity and ability of conjugated diatom substrates to distinguish complementary (S. typhi) and non-complementary (Escherichia coli) antigens. The immunocomplexed biosensor showed detection limit of 10 pg. The excellent performance of biosensor is associated to its large surface-to-volume ratio, good photoluminescent property, and biocompatibility of diatom frustules, which enhances the antibody immobilization and facilitates the nucleophilic electron transfer between antibody and conjugated diatom surface. Hence, immunocomplexed diatom substrates are considered to be a suitable platform for the environmental monitoring of water-borne pathogen S. typhi.
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Affiliation(s)
- Viji Selvaraj
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641 046, India
| | - Anbazhagi Muthukumar
- Department of Environmental Sciences, Bharathiar University, Coimbatore, Tamilnadu, 641 046, India
| | - Ponpandian Nagamony
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641 046, India
| | - Viswanathan Chinnuswamy
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641 046, India.
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15
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Selvaraj V, Thomas N, Anthuvan AJ, Nagamony P, Chinnuswamy V. Amine-functionalized diatom frustules: a platform for specific and sensitive detection of nitroaromatic explosive derivative. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:20540-20549. [PMID: 29243153 DOI: 10.1007/s11356-017-0916-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2017] [Accepted: 12/03/2017] [Indexed: 06/07/2023]
Abstract
In the present study, an attempt was made to develop a proof of concept for the detection of nitroaromatic explosive derivatives through the photoluminescence (PL) quenching process using functionalized diatom frustules as a sensing platform. The diatom frustules are composed of nanostructured, highly porous biogenic silica material and emit strong, visible blue PL upon UV excitation. PL-active biosilica was isolated from the marine diatom Nitzschia sp. and was amine-functionalized to develop a sensing platform. Functionalized diatom frustules were further characterized using field emission scanning electron microscope and a series of spectroscopic methods. When nitroaromatic compounds were bound to the functionalized diatom frustules biosilica, the PL intensity from the functionalized biosilica was partially quenched due to the electrophilic nature of the nitro (-NO) groups. The quenching process confirmed the Meisenheimer complex formation and was investigated by using Fourier transform infrared spectroscopy and time-resolved photoluminescence studies. The developed platform was further evaluated for its sensitivity and specificity, and the limit of detection (LOD) of the assay was determined as 1 μM for a series of nitroaromatic explosive compounds. In conclusion, the developed sensing platform will have great utility in the development of on-site detection platforms for sensitive detection of warfare explosive nitroaromatic compounds from the environment.
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Affiliation(s)
- Viji Selvaraj
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641046, India
| | - Neethi Thomas
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641046, India
| | - Allen Joseph Anthuvan
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641046, India
| | - Ponpandian Nagamony
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641046, India
| | - Viswanathan Chinnuswamy
- Department of Nanoscience and Technology, Bharathiar University, Coimbatore, Tamilnadu, 641046, India.
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16
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Brodie J, Chan CX, De Clerck O, Cock JM, Coelho SM, Gachon C, Grossman AR, Mock T, Raven JA, Smith AG, Yoon HS, Bhattacharya D. The Algal Revolution. TRENDS IN PLANT SCIENCE 2017; 22:726-738. [PMID: 28610890 DOI: 10.1016/j.tplants.2017.05.005] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2017] [Revised: 05/04/2017] [Accepted: 05/16/2017] [Indexed: 05/28/2023]
Abstract
Algae are (mostly) photosynthetic eukaryotes that occupy multiple branches of the tree of life, and are vital for planet function and health. In this review, we highlight a transformative period in studies of the evolution and functioning of this extraordinary group of organisms and their potential for novel applications, wrought by high-throughput 'omic' and reverse genetic methods. We cover the origin and diversification of algal groups, explore advances in understanding the link between phenotype and genotype, consider algal sex determination, and review progress in understanding the roots of algal multicellularity. Experimental evolution studies to determine how algae evolve in changing environments are highlighted, as is their potential as production platforms for compounds of commercial interest, such as biofuel precursors, nutraceuticals, or therapeutics.
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Affiliation(s)
- Juliet Brodie
- Natural History Museum, Department of Life Sciences, London SW7 5BD, UK
| | - Cheong Xin Chan
- Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Olivier De Clerck
- Research Group Phycology, Ghent University, Krijgslaan 281, S8, 9000 Ghent, Belgium
| | - J Mark Cock
- CNRS, Sorbonne Université, UPMC University Paris 06, Algal Genetics Group, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS 90074, Roscoff F-29688, France
| | - Susana M Coelho
- CNRS, Sorbonne Université, UPMC University Paris 06, Algal Genetics Group, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS 90074, Roscoff F-29688, France
| | - Claire Gachon
- Scottish Association for Marine Science, Scottish Marine Institute, Oban, PA37 1QA, UK
| | - Arthur R Grossman
- Department of Plant Biology, The Carnegie Institution, Stanford, CA 94305, USA
| | - Thomas Mock
- School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK
| | - John A Raven
- Permanent address: Division of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, UK; School of Plant Biology, University of Western Australia, Crawley, WA 6009, Australia
| | - Alison G Smith
- Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK
| | - Hwan Su Yoon
- Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Korea
| | - Debashish Bhattacharya
- Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ 08901, USA.
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Doron L, Segal N, Shapira M. Transgene Expression in Microalgae-From Tools to Applications. FRONTIERS IN PLANT SCIENCE 2016; 7:505. [PMID: 27148328 PMCID: PMC4840263 DOI: 10.3389/fpls.2016.00505] [Citation(s) in RCA: 92] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Accepted: 03/29/2016] [Indexed: 05/17/2023]
Abstract
Microalgae comprise a biodiverse group of photosynthetic organisms that reside in water sources and sediments. The green microalgae Chlamydomonas reinhardtii was adopted as a useful model organism for studying various physiological systems. Its ability to grow under both photosynthetic and heterotrophic conditions allows efficient growth of non-photosynthetic mutants, making Chlamydomonas a useful genetic tool to study photosynthesis. In addition, this green alga can grow as haploid or diploid cells, similar to yeast, providing a powerful genetic system. As a result, easy and efficient transformation systems have been developed for Chlamydomonas, targeting both the chloroplast and nuclear genomes. Since microalgae comprise a rich repertoire of species that offer variable advantages for biotech and biomed industries, gene transfer technologies were further developed for many microalgae to allow for the expression of foreign proteins of interest. Expressing foreign genes in the chloroplast enables the targeting of foreign DNA to specific sites by homologous recombination. Chloroplast transformation also allows for the introduction of genes encoding several enzymes from a complex pathway, possibly as an operon. Expressing foreign proteins in the chloroplast can also be achieved by introducing the target gene into the nuclear genome, with the protein product bearing a targeting signal that directs import of the transgene-product into the chloroplast, like other endogenous chloroplast proteins. Integration of foreign genes into the nuclear genome is mostly random, resulting in large variability between different clones, such that extensive screening is required. The use of different selection modalities is also described, with special emphasis on the use of herbicides and metabolic markers which are considered to be friendly to the environment, as compared to drug-resistance genes that are commonly used. Finally, despite the development of a wide range of transformation tools and approaches, expression of foreign genes in microalgae suffers from low efficiency. Thus, novel tools have appeared in recent years to deal with this problem. Finally, while C. reinhardtii was traditionally used as a model organism for the development of transformation systems and their subsequent improvement, similar technologies can be adapted for other microalgae that may have higher biotechnological value.
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Moreno MD, Ma K, Schoenung J, Dávila LP. An integrated approach for probing the structure and mechanical properties of diatoms: Toward engineered nanotemplates. Acta Biomater 2015. [PMID: 26196080 DOI: 10.1016/j.actbio.2015.07.028] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The wide variety of diatom frustule shapes and intricate architectures provide viable prototypes to guide the design and fabrication of nanodevices and nanostructured materials for applications ranging from sensors to nanotemplates. In this study, a combined experimental-simulation method was developed to probe the porous structure and mechanical behavior of two distinct marine diatom species, Coscinodiscus sp. (centric) and Synedra sp. (pennate), through ambient nanoindentation and finite element method analysis. These diatom frustule dimensions differed largely depending on diatom species with pore diameters d ranging from 0.3 to 3.0 μm. Young's modulus E and hardness H measurements of the diatom frustules were obtained via nanoindentation experiments. These values varied depending on diatom species (E between 1.1-10.6 GPa, H between 0.10-1.03 GPa for the Coscinodiscus sp.; and E between 13.7-18.6 GPa, H between 0.85-1.41 GPa for the Synedra sp.). Additionally, the mechanical response of diatom structures to uniform compression was examined. Predictive simulations were performed on the aforementioned diatom frustules, as well as another diatom structure (pennate Fragilariopsis kerguelensis), to correlate the mechanical response with specific morphology variables (e.g., pore or slit sizes). Results from calculated von Mises stress and displacement distributions unveil unique information on the effect that uniform loads have on these frustules, which can aid the design of tailored nanotemplates. A correlation between mechanical properties and porosity was established for selected frustules, and reported for the first time in this study.
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Affiliation(s)
- Miguel Diaz Moreno
- Materials Science and Engineering, School of Engineering, University of California Merced, 5200 N. Lake Road, Merced, CA 95343, USA
| | - Kaka Ma
- Department of Chemical Engineering and Materials Science, College of Engineering, University of California Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Julie Schoenung
- Department of Chemical Engineering and Materials Science, College of Engineering, University of California Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Lilian P Dávila
- Materials Science and Engineering, School of Engineering, University of California Merced, 5200 N. Lake Road, Merced, CA 95343, USA.
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