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Irawati W, Yuwono T, Pinontoan R, Lindarto V. Optimising Wastewater Treatment: Acinetobacter sp. IrC1 as a potential multi-resistant bacterium for copper accumulation and dyes decolourisation. Trop Life Sci Res 2023; 34:37-56. [PMID: 37860091 PMCID: PMC10583844 DOI: 10.21315/tlsr2023.34.3.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Accepted: 02/02/2023] [Indexed: 10/21/2023] Open
Abstract
Improper disposal of waste containing copper and dye is an environmental issue that must be resolved immediately due to its harmful, non-degradable and toxic properties. Bioremediation efficiency can improve by cultivating copper and dye multi-resistant bacteria to remove various pollutant types simultaneously. This study aims at establishing the multi-resistance of Acinetobacter sp. IrC1 to copper and dyes. The effects of copper concentration on growth were determined using a spectrophotometer, while accumulation was analysed using an atomic absorption spectrophotometer. Bacteria-mediated dye decolourisation dyes were observed based on clear zone formation around bacterial colonies, while decolourisation percentage was calculated using a spectrophotometer. Results demonstrate that Acinetobacter sp. IrC1 resisted up to 8 mM CuSO4 and accumulated up to 292.93 mg/g dry weight of copper cells. Acinetobacter sp. IrC1 isolates were also resistant to 500 ppm Methylene Blue, Malachite Green, Congo Red, Mordant Orange, Reactive Black, Direct Yellow, Reactive Orange, Remazol, Wantex Red and Wantex Yellow dye, successfully removing up to 68.35% and 79.50% Methylene Blue and Basic Fuchsine in a medium containing 3 mM CuSO4, respectively. Further investigations are required to analyse the genetic composition of multi-resistant bacteria to optimise the effectiveness of indigenous bacterial isolates as bioremediation agents.
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Affiliation(s)
- Wahyu Irawati
- Department of Biology Education, Universitas Pelita Harapan, Jalan M.H. Thamrin Boulevard No.1100, Kelapa Dua, Tangerang Regency, Banten 15811, Indonesia
| | - Triwibowo Yuwono
- Department of Agricultural Microbiology, Universitas Gadjah Mada, Bulaksumur, Caturtunggal, Kec. Depok, Kabupaten Sleman 55281 Yogyakarta, Indonesia
| | - Reinhard Pinontoan
- Department of Biology, Universitas Pelita Harapan, Jalan M.H. Thamrin Boulevard No.1100, Kelapa Dua, Tangerang Regency, Banten 15811,Tangerang, Indonesia
| | - Valentine Lindarto
- Department of Natural Sciences, Sekolah Menengah Atas Dian Harapan Lippo Village, Tangerang, Indonesia
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Chauhan AK, Choudhury B. Synthetic dyes degradation using lignolytic enzymes produced from Halopiger aswanensis strain ABC_IITR by Solid State Fermentation. CHEMOSPHERE 2021; 273:129671. [PMID: 33517115 DOI: 10.1016/j.chemosphere.2021.129671] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2020] [Revised: 11/01/2020] [Accepted: 01/13/2021] [Indexed: 06/12/2023]
Abstract
The present work focuses on studying the degradation of industrial synthetic dyes, which poses serious health hazards and a drastic impact on the environment. Currently available enzymatic processes have higher production and operational costs. However, most enzymes are active at acidic pH, which limits its application in textile dye degradation. This problem can be overcome by lignolytic enzymes obtained from halo-alkaliphile through Solid State Fermentation (SSF) using wheat bran (agro-byproduct) as a substrate. The major lignolytic enzymes studied were Lignin Peroxidase (LiP), Manganese Peroxidase (MnP), and laccase. The results demonstrated the highest activity of 215.4 ± 1.57 of LiP, 36.8 ± 2.38 of MnP, and 8.34 ± 0.21 IU/gds of laccase. Crude enzymes were used to treat synthetic dyes (mainly azo dyes), and their potential for its degradation was confirmed by spectrophotometric, GC-MS, and HPLC analysis. The highest decolorization of 82-93% of Malachite Green (MG) was achieved in LiP and MnP mediated reaction system within 2 hours. The laccase reaction system showed degradation of 53.87% of methyl orange without adding any redox mediator. After obtaining these results, the crude LiP and MnP in the reaction system were further subjected to decolorization at a higher MG concentration of 100-600 mg/L without a redox mediator. As a result, both LiP and MnP decolorized MG by 72-89%. Further, GC-MS analysis of MG biodegradation products confirmed the formation of less toxic low molecular weight products such as benzaldehyde and methanone.
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Affiliation(s)
- Ajay Kumar Chauhan
- Department of Biotechnology, Indian Institute of Technology, Roorkee, Uttarakhand, 24667, India
| | - Bijan Choudhury
- Department of Biotechnology, Indian Institute of Technology, Roorkee, Uttarakhand, 24667, India.
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Antunes F, Marçal S, Taofiq O, M. M. B. Morais A, Freitas AC, C. F. R. Ferreira I, Pintado M. Valorization of Mushroom By-Products as a Source of Value-Added Compounds and Potential Applications. Molecules 2020; 25:molecules25112672. [PMID: 32526879 PMCID: PMC7321189 DOI: 10.3390/molecules25112672] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Revised: 05/27/2020] [Accepted: 06/03/2020] [Indexed: 01/08/2023] Open
Abstract
Nowadays, the food sector is highly concerned with environmental issues and foreseen to develop strategies to reduce waste and losses resulting from activities developed in the food system. An approach is to increment added value to the agro-industrial wastes, which might provide economic growth and environmental protection, contributing to a circular economy. Mushroom by-products represent a disposal problem, but they are also promising sources of important compounds, which may be used due to their functional and nutritional properties. Research has been developed in different fields to obtain value added solutions for the by-products generated during mushroom production and processing. Bioactive compounds have been obtained and applied in the development of nutraceutical and pharmaceutical formulations. Additionally, other applications have been explored and include animal feed, fertilizer, bioremediation, energy production, bio-based materials, cosmetics and cosmeceuticals. The main purpose of this review is to highlight the relevant composition of mushroom by-products and discuss their potential as a source of functional compounds and other applications. Future research needs to explore pilot and industrial scale extraction methods to understand the technological feasibility and the economic sustainability of the bioactive compounds extraction and valorization towards different applications.
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Affiliation(s)
- Filipa Antunes
- CBQF–Centro de Biotecnologia e Química Fina–Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (F.A.); (S.M.); (A.M.M.B.M.); (A.C.F.)
| | - Sara Marçal
- CBQF–Centro de Biotecnologia e Química Fina–Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (F.A.); (S.M.); (A.M.M.B.M.); (A.C.F.)
| | - Oludemi Taofiq
- Centro de Investigação de Montanha (CIMO), Instituto Politécnico de Bragança, Campus de Santa Apolónia, 5300-253 Bragança, Portugal; (O.T.); (I.C.F.R.F.)
| | - Alcina M. M. B. Morais
- CBQF–Centro de Biotecnologia e Química Fina–Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (F.A.); (S.M.); (A.M.M.B.M.); (A.C.F.)
| | - Ana Cristina Freitas
- CBQF–Centro de Biotecnologia e Química Fina–Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (F.A.); (S.M.); (A.M.M.B.M.); (A.C.F.)
| | - Isabel C. F. R. Ferreira
- Centro de Investigação de Montanha (CIMO), Instituto Politécnico de Bragança, Campus de Santa Apolónia, 5300-253 Bragança, Portugal; (O.T.); (I.C.F.R.F.)
| | - Manuela Pintado
- CBQF–Centro de Biotecnologia e Química Fina–Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal; (F.A.); (S.M.); (A.M.M.B.M.); (A.C.F.)
- Correspondence:
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Li L, Liu B, Yang J, Zhang Q, He C, Jia R. Catalytic properties of a short manganese peroxidase from Irpex lacteus F17 and the role of Glu166 in the Mn 2+-independent activity. Int J Biol Macromol 2019; 136:859-869. [PMID: 31226373 DOI: 10.1016/j.ijbiomac.2019.06.065] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 06/05/2019] [Accepted: 06/11/2019] [Indexed: 01/30/2023]
Abstract
Il-MnP1 (GenBank: AGO86670.2) has been confirmed by sequence analysis as a short manganese peroxidase (MnP) from Irpex lacteus F17 (CCTCC AF 2014020). To investigate the catalytic properties, the oxidation of typical aromatic substrates and the pathways of guaiacol oxidation by Il-MnP1, both in the presence and absence of Mn2+ at either pH 4.0 or pH 7.4, were analyzed. Results showed that Il-MnP1 exhibited higher oxidative activity in the presence of Mn2+ than in the absence of Mn2+ toward the majority of the selected substrates at pH 4.0. Additionally, the similar product compositions suggested that the oxidation of guaiacol mainly belongs to a series of polymeric reactions of radicals initiated by Il-MnP1, whether they were in the presence and absence of Mn2+ at either pH 4.0 or 7.4. Furthermore, two variants (E166G, E166Q) were found using site-directed mutagenesis, to improve the Mn2+-independent oxidative activity significantly. The catalytic efficiency (Kcat/Km) of E166G and E166Q in 2, 6-dimethoxyphenol oxidation was higher than Il-MnP1 by 170 and 34 times, respectively. The study revealed certain differences in catalytic properties between Mn2+ dependent and independent oxidation by Il-MnP1. More importantly, a residue (E166) was related to the Mn2+-independent activity of a short MnP.
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Affiliation(s)
- Liuqing Li
- School of Life Science, Anhui University, Hefei, Anhui Province, China; Anhui Key Laboratory of Modern Biomanufacturing, Anhui University, Hefei,Anhui Province, China
| | - Binjie Liu
- School of Life Science, Anhui University, Hefei, Anhui Province, China; Anhui Key Laboratory of Modern Biomanufacturing, Anhui University, Hefei,Anhui Province, China
| | - Jun Yang
- School of Life Science, Anhui University, Hefei, Anhui Province, China; Anhui Key Laboratory of Modern Biomanufacturing, Anhui University, Hefei,Anhui Province, China
| | - Qiong Zhang
- School of Chemistry and Chemical Engineering, Anhui University, Hefei, Anhui Province, China
| | - Chao He
- School of Life Science, Anhui University, Hefei, Anhui Province, China; Anhui Key Laboratory of Modern Biomanufacturing, Anhui University, Hefei,Anhui Province, China
| | - Rong Jia
- School of Life Science, Anhui University, Hefei, Anhui Province, China; Anhui Key Laboratory of Modern Biomanufacturing, Anhui University, Hefei,Anhui Province, China.
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Voběrková S, Solčány V, Vršanská M, Adam V. Immobilization of ligninolytic enzymes from white-rot fungi in cross-linked aggregates. CHEMOSPHERE 2018; 202:694-707. [PMID: 29602102 DOI: 10.1016/j.chemosphere.2018.03.088] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Revised: 12/22/2017] [Accepted: 03/12/2018] [Indexed: 05/20/2023]
Abstract
Ligninolytic enzymes from white-rot fungi are widely used in biotechnological processes. However, the application of these enzymes as free enzymes is limited due to their instability and lack of reusability. Enzyme stabilization is therefore a major challenge in biocatalytic process research, and immobilization methods are desirable. Using cross-linked enzyme aggregates (CLEAs) such as magnetic CLEAs, porous-CLEAs and combi-CLEAs is a promising technique for overcoming these issues. Cross-linking methods can stabilize and immobilize enzymes by interconnecting enzyme molecules via multiple bonds using cross-linking agents such as glutaraldehyde. The high catalyst density and microporous assembly of CLEAs guarantee high catalyst activity, which, together with their long shelf life, operational stability, and reusability, provide a cost-efficient alternative to matrix-assisted immobilization approaches. Here, we review current progress in ligninolytic enzyme immobilization and provide a comprehensive review of CLEAs. Moreover, we summarize the use of these CLEAs for biocatalysis processes, bioremediation such as dye decolourization, wastewater treatment or pharmaceutically active compound elimination.
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Affiliation(s)
- Stanislava Voběrková
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Veronika Solčány
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Martina Vršanská
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic
| | - Vojtěch Adam
- Department of Chemistry and Biochemistry, Mendel University in Brno, Zemedelska 1, CZ-613 00, Brno, Czech Republic; Central European Institute of Technology, Brno University of Technology, Purkynova 123, CZ-612 00, Brno, Czech Republic.
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Kim SI, Ha BS, Kim MS, Park M, Ro HS. Evaluation of copper-inducible fungal laccase promoter in foreign gene expression in Pichia pastoris. BIOTECHNOL BIOPROC E 2016. [DOI: 10.1007/s12257-015-0567-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Park M, Kim M, Kim S, Ha B, Ro HS. Differential Expression of Laccase Genes in Pleurotus ostreatus and Biochemical Characterization of Laccase Isozymes Produced in Pichia pastoris. MYCOBIOLOGY 2015; 43:280-7. [PMID: 26539044 PMCID: PMC4630434 DOI: 10.5941/myco.2015.43.3.280] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2015] [Revised: 08/25/2015] [Accepted: 08/31/2015] [Indexed: 05/26/2023]
Abstract
In this study, transcriptome analysis of twelve laccase genes in Pleurotus ostreatus revealed that their expression was differentially regulated at different developmental stages. Lacc5 and Lacc12 were specifically expressed in fruiting bodies and primordia, respectively, whereas Lacc6 was expressed at all developmental stages. Lacc1 and Lacc3 were specific to the mycelial stage in solid medium. In order to investigate their biochemical characteristics, these laccases were heterologously expressed in Pichia pastoris using the pPICHOLI-2 expression vector. Expression of the laccases was facilitated by intermittent addition of methanol as an inducer and sole carbon source, in order to reduce the toxic effects associated with high methanol concentration. The highest expression was observed when the recombinant yeast cells were grown for 5 days at 15℃ with intermittent addition of 1% methanol at a 12-hr interval. Investigation of enzyme kinetics using 2,2-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid (ABTS) as a substrate revealed that the primordium-specific laccase Lacc12 was 5.4-fold less active than Lacc6 at low substrate concentration with respect to ABTS oxidation activity. The optimal pH and temperature of Lacc12 were 0.5 pH units and 5℃ higher than those of Lacc6. Lacc12 showed maximal activity at pH 3.5 and 50℃, which may reflect the physiological conditions at the primordiation stage.
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Affiliation(s)
- Minsa Park
- Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea
| | - Minseek Kim
- Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea
| | - Sinil Kim
- Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea
| | - Byeongsuk Ha
- Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea
| | - Hyeon-Su Ro
- Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea
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Yang J, Yang X, Lin Y, Ng TB, Lin J, Ye X. Laccase-catalyzed decolorization of malachite green: performance optimization and degradation mechanism. PLoS One 2015; 10:e0127714. [PMID: 26020270 PMCID: PMC4447439 DOI: 10.1371/journal.pone.0127714] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2014] [Accepted: 04/17/2015] [Indexed: 11/19/2022] Open
Abstract
Malachite green (MG) was decolorized by laccase (LacA) of white-rot fungus Cerrena sp. with strong decolorizing ability. Decolorization conditions were optimized with response surface methodology. A highly significant quadratic model was developed to investigate MG decolorization with LacA, and the maximum MG decolorization ratio of 91.6% was predicted under the conditions of 2.8 U mL(-1) LacA, 109.9 mg L(-1) MG and decolorization for 172.4 min. Kinetic studies revealed the Km and kcat values of LacA toward MG were 781.9 mM and 9.5 s(-1), respectively. UV-visible spectra confirmed degradation of MG, and the degradation mechanism was explored with liquid chromatography-mass spectrometry (LC-MS) analysis. Based on the LC-MS spectra of degradation products, LacA catalyzed MG degradation via two simultaneous pathways. In addition, the phytotoxicity of MG, in terms of inhibition on seed germination and seedling root elongation of Nicotiana tabacum and Lactuca sativa, was reduced after laccase treatment. These results suggest that laccase of Cerrena was effective in decolorizing MG and promising in bioremediation of wastewater in food and aquaculture industries.
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Affiliation(s)
- Jie Yang
- College of Biological Sciences and Technology, Fuzhou University, Fuzhou, Fujian, China
- Fujian Key Laboratory of Marine Enzyme Engineering, Fuzhou, Fujian, China
| | - Xiaodan Yang
- College of Biological Sciences and Technology, Fuzhou University, Fuzhou, Fujian, China
- Fujian Key Laboratory of Marine Enzyme Engineering, Fuzhou, Fujian, China
| | - Yonghui Lin
- Technical Center, Fujian Entry-Exit Inspection and Quarantine Bureau, Fuzhou, Fujian, China
| | - Tzi Bun Ng
- School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong, China
| | - Juan Lin
- College of Biological Sciences and Technology, Fuzhou University, Fuzhou, Fujian, China
- Fujian Key Laboratory of Marine Enzyme Engineering, Fuzhou, Fujian, China
| | - Xiuyun Ye
- College of Biological Sciences and Technology, Fuzhou University, Fuzhou, Fujian, China
- Fujian Key Laboratory of Marine Enzyme Engineering, Fuzhou, Fujian, China
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