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For: Siksnys V, Timinskas A, Klimasauskas S, Butkus V, Janulaitis A. Sequence similarity among type-II restriction endonucleases, related by their recognized 6-bp target and tetranucleotide-overhang cleavage. Gene 1995;157:311-4. [PMID: 7607515 DOI: 10.1016/0378-1119(94)00632-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Number Cited by Other Article(s)
1
Thway K, Folpe AL. Update on selected advances in the immunohistochemical and molecular genetic analysis of soft tissue tumors. Virchows Arch 2019;476:3-15. [PMID: 31701221 DOI: 10.1007/s00428-019-02678-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 09/05/2019] [Accepted: 09/22/2019] [Indexed: 12/12/2022]
2
Skowronek K, Boniecki MJ, Kluge B, Bujnicki JM. Rational engineering of sequence specificity in R.MwoI restriction endonuclease. Nucleic Acids Res 2012;40:8579-92. [PMID: 22735699 PMCID: PMC3458533 DOI: 10.1093/nar/gks570] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]  Open
3
Orlowski J, Bujnicki JM. Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses. Nucleic Acids Res 2008;36:3552-69. [PMID: 18456708 PMCID: PMC2441816 DOI: 10.1093/nar/gkn175] [Citation(s) in RCA: 93] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
4
Skowronek KJ, Kosinski J, Bujnicki JM. Theoretical model of restriction endonuclease HpaI in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis. Proteins 2006;63:1059-68. [PMID: 16498623 DOI: 10.1002/prot.20920] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
5
Kriukiene E, Lubiene J, Lagunavicius A, Lubys A. MnlI—The member of H-N-H subtype of Type IIS restriction endonucleases. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2005;1751:194-204. [PMID: 16024301 DOI: 10.1016/j.bbapap.2005.06.006] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2005] [Revised: 06/09/2005] [Accepted: 06/10/2005] [Indexed: 10/25/2022]
6
Molecular Phylogenetics of Restriction Endonucleases. ACTA ACUST UNITED AC 2004. [DOI: 10.1007/978-3-642-18851-0_3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2023]
7
Skowron PM, Majewski J, Zylicz-Stachula A, Rutkowska SM, Jaworowska I, Harasimowicz-Słowińska RI. A new Thermus sp. class-IIS enzyme sub-family: isolation of a 'twin' endonuclease TspDTI with a novel specificity 5'-ATGAA(N(11/9))-3', related to TspGWI, TaqII and Tth111II. Nucleic Acids Res 2003;31:e74. [PMID: 12853651 PMCID: PMC167652 DOI: 10.1093/nar/gng074] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2003] [Revised: 05/13/2003] [Accepted: 05/13/2003] [Indexed: 11/14/2022]  Open
8
Deva T, Krishnaswamy S. Structure-based sequence alignment of type-II restriction endonucleases. BIOCHIMICA ET BIOPHYSICA ACTA 2001;1544:217-28. [PMID: 11341931 DOI: 10.1016/s0167-4838(00)00223-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
9
Tang D, Ando S, Takasaki Y, Tadano J. Mutational analyses of restriction endonuclease-HindIII mutant E86K with higher activity and altered specificity. PROTEIN ENGINEERING 2000;13:283-9. [PMID: 10810160 DOI: 10.1093/protein/13.4.283] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
10
Reuter M, Schneider-Mergener J, Kupper D, Meisel A, Mackeldanz P, Krüger DH, Schroeder C. Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires. J Biol Chem 1999;274:5213-21. [PMID: 9988771 DOI: 10.1074/jbc.274.8.5213] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
11
Morgan R, Xiao JP, Xu SY. Characterization of an extremely thermostable restriction enzyme, PspGI, from a Pyrococcus strain and cloning of the PspGI restriction-modification system in Escherichia coli. Appl Environ Microbiol 1998;64:3669-73. [PMID: 9758783 PMCID: PMC106503 DOI: 10.1128/aem.64.10.3669-3673.1998] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
12
Lagunavicius A, Grazulis S, Balciunaite E, Vainius D, Siksnys V. DNA binding specificity of MunI restriction endonuclease is controlled by pH and calcium ions: involvement of active site carboxylate residues. Biochemistry 1997;36:11093-9. [PMID: 9287152 DOI: 10.1021/bi963126a] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
13
Lagunavicius A, Siksnys V. Site-directed mutagenesis of putative active site residues of MunI restriction endonuclease: replacement of catalytically essential carboxylate residues triggers DNA binding specificity. Biochemistry 1997;36:11086-92. [PMID: 9287151 DOI: 10.1021/bi963125i] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
14
Stahl F, Wende W, Jeltsch A, Pingoud A. Introduction of asymmetry in the naturally symmetric restriction endonuclease EcoRV to investigate intersubunit communication in the homodimeric protein. Proc Natl Acad Sci U S A 1996;93:6175-80. [PMID: 8650239 PMCID: PMC39209 DOI: 10.1073/pnas.93.12.6175] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
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