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Debnath R, Das S, Mukhopadhyay A, Saha T. Enrichment of laccase production by Phoma herbarum isolate KU4 under solid-state fermentation by optimizing RSM coefficients using genetic algorithm. Lett Appl Microbiol 2021; 73:515-528. [PMID: 34263965 DOI: 10.1111/lam.13537] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Revised: 06/27/2021] [Accepted: 07/07/2021] [Indexed: 10/20/2022]
Abstract
The process parameters were optimized to obtain enhanced enzyme activity from the fungus Phoma herbarum isolate KU4 using rice straw and saw dust as substrate under solid-state fermentation using Response surface methodology (RSM). Genetic algorithm was used to validate the RSM for maximum laccase production. Six variables, viz., pH of the media, initial moisture content, copper sulphate concentration, concentration of tannic acid, inoculum concentration and incubation time were found to be effective and optimized for enhanced production. Maximum laccase production was achieved by RSM at pH 5·0 and 86% of initial moisture content of the culture medium, 150 µmol l-1 of CuSO4 , 1·5% tannic acid and 0·128 g inoculum g-1 dry substrate inoculum size on the fourth day of fermentation. The highest laccase activity was observed as 79 008 U g-1 , which is approximately sixfold enhanced production compared to the unoptimized condition (12 085·26 U g-1 ).
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Affiliation(s)
- R Debnath
- Department of Molecular Biology & Biotechnology, Faculty of Science, University of Kalyani, Kalyani, India
| | - S Das
- Department of Molecular Biology & Biotechnology, Faculty of Science, University of Kalyani, Kalyani, India
| | - A Mukhopadhyay
- Department of Computer Science & Engineering, Faculty of Engineering Technology & Management, University of Kalyani, Kalyani, West Bengal, India
| | - T Saha
- Department of Molecular Biology & Biotechnology, Faculty of Science, University of Kalyani, Kalyani, India
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Rodríguez RD, Heredia G, Siles JA, Jurado M, Saparrat MCN, García-Romera I, Sampedro I. Enhancing laccase production by white-rot fungus Funalia floccosa LPSC 232 in co-culture with Penicillium commune GHAIE86. Folia Microbiol (Praha) 2018; 64:91-99. [PMID: 30084087 DOI: 10.1007/s12223-018-0635-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 07/25/2018] [Indexed: 01/30/2023]
Abstract
To obtain enzymatic preparations with higher laccase activity levels from Funalia floccosa LPSC 232, available for use in several applications, co-cultures with six filamentous microfungi were tested. A laccase non-producing soil fungus, identified as Penicillium commune GHAIE86, showed an outstanding ability to increase laccase activity (3-fold as compared to that for monoculture) when inoculated in 6-day-old F. floccosa cultures. Maximum laccase production with the F. floccosa and P. commune co-culture reached 60 U/mL, or twice that induced by chemical treatments alone. Our study demonstrated that co-culture with soil fungi might be a promising method for improving laccase production in F. floccosa. Although the enhancement of laccase activity was a function of P. commune inoculation time, two laccase isoenzymes produced by F. floccosa remained unchanged when strains were co-cultured. These data are compatible with the potential of F. floccosa in agricultural applications in soil, whose enzyme machinery could be activated by soil fungi such as P. commune.
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Affiliation(s)
- Rosario Díaz Rodríguez
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Profesor Albareda 1, 18008, Granada, Spain
| | - Gabriela Heredia
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Profesor Albareda 1, 18008, Granada, Spain.,Institute of Ecology, A.C, Carretera antigua Xalapa-Coatepec 351, El Haya, 91070, Xalapa, Veracruz, Mexico
| | - José A Siles
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Profesor Albareda 1, 18008, Granada, Spain.,Institute of Microbiology, University of Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
| | - Miguel Jurado
- Department of Food Chemistry and Technology, ETSIAAB, Technical University of Madrid, Madrid, Spain
| | - Mario Carlos Nazareno Saparrat
- Institute of Plant Physiology (INFIVE), National University of La Plata (UNLP)-CCT-La Plata-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Diag. 113 and 61, CC 327, 1900, La Plata, Argentina
| | - Inmaculada García-Romera
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Profesor Albareda 1, 18008, Granada, Spain
| | - Inmaculada Sampedro
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Profesor Albareda 1, 18008, Granada, Spain. .,Faculty of Pharmacy, Department of Microbiology, University of Granada, Granada, Spain. .,Biomedical Research Center (CIBM), Institute of Biotechnology, University of Granada, Granada, Spain.
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Cambri G, de Sousa MML, Fonseca DDM, Marchini FK, da Silveira JLM, Paba J. Analysis of the Biotechnological Potential of a Lentinus crinitus Isolate in the Light of Its Secretome. J Proteome Res 2016; 15:4557-4568. [DOI: 10.1021/acs.jproteome.6b00636] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Geison Cambri
- Departamento
de Bioquímica, Setor de Ciências Biológicas,
Centro Politécnico, Universidade Federal do Paraná, 81531-990 Curitiba-PR, Brazil
| | - Mirta Mittelstedt Leal de Sousa
- Department
of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, NTNU, N-7491 Trondheim, Norway
| | - Davi de Miranda Fonseca
- Department
of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, NTNU, N-7491 Trondheim, Norway
- Proteomics
and Metabolomics Core Facility (PROMEC), Norwegian University of Science and Technology, NTNU, N-7491 Trondheim, Norway
| | - Fabricio K. Marchini
- Laboratório
de Genômica Funcional, Instituto Carlos Chagas, Fundação Oswaldo Cruz, 81350-010 Curitiba-PR, Brazil
| | - Joana Lea Meira da Silveira
- Departamento
de Bioquímica, Setor de Ciências Biológicas,
Centro Politécnico, Universidade Federal do Paraná, 81531-990 Curitiba-PR, Brazil
| | - Jaime Paba
- Departamento
de Bioquímica, Setor de Ciências Biológicas,
Centro Politécnico, Universidade Federal do Paraná, 81531-990 Curitiba-PR, Brazil
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Baumann P, Hubbuch J. Downstream process development strategies for effective bioprocesses: Trends, progress, and combinatorial approaches. Eng Life Sci 2016; 17:1142-1158. [PMID: 32624742 DOI: 10.1002/elsc.201600033] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Revised: 03/09/2016] [Accepted: 04/07/2016] [Indexed: 12/26/2022] Open
Abstract
The biopharmaceutical industry is at a turning point moving toward a more customized and patient-oriented medicine (precision medicine). Straightforward routines such as the antibody platform process are extended to production processes for a new portfolio of molecules. As a consequence, individual and tailored productions require generic approaches for a fast and dedicated purification process development. In this article, different effective strategies in biopharmaceutical purification process development are reviewed that can analogously be used for the new generation of antibodies. Conventional approaches based on heuristics and high-throughput process development are discussed and compared to modern technologies such as multivariate calibration and mechanistic modeling tools. Such approaches constitute a good foundation for fast and effective process development for new products and processes, but their full potential becomes obvious in a correlated combination. Thus, different combinatorial approaches are presented, which might become future directions in the biopharmaceutical industry.
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Affiliation(s)
- Pascal Baumann
- Biomolecular Separation Engineering Karlsruhe Institute of Technology (KIT) Karlsruhe Germany
| | - Jürgen Hubbuch
- Biomolecular Separation Engineering Karlsruhe Institute of Technology (KIT) Karlsruhe Germany
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Response Surface Methodology Mediated Modulation of Laccase Production by Polyporus arcularius. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2015. [DOI: 10.1007/s13369-014-1499-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Application of response surface methodology for protein enrichment of cassava peel as animal feed by the white-rot fungus Panus tigrinus M609RQY. Food Hydrocoll 2014. [DOI: 10.1016/j.foodhyd.2014.04.027] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Nadeem A, Baig S, Iqbal K, Sheikh N. Impact of laccase enzyme inducers on solid waste compost maturity and stability. ENVIRONMENTAL TECHNOLOGY 2014; 35:3130-3138. [PMID: 25244141 DOI: 10.1080/09593330.2014.932439] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The influence of inducers of laccase produced by Pleurotus ostreatus-P1 on the physicochemical properties of solid waste compost was investigated. In order to examine the degree of humification and time period for maturity and stability of compost, three different treatments (T: laccase; T1: laccase+CuSO4; and T2: laccase+CuSO4+CaCl2) were inoculated on solid waste in the initial stage of the composting process. During the composting process, the carbon nitrogen ratio (C/N), nitrate ([Formula: see text]), ammonium nitrogen ([Formula: see text]), cation exchange capacity (CEC), humic acid (HA) and fulvic acid (FA) humification rate (HR), Humification Index (HI), and degree of polymerization (DP) were assessed for the evaluation of compost maturity and stability, and it was found that T2 treatment C/N, CEC, and HI was greater, 46.8%, 37.2%, and 38.46%, respectively, than T at the end of the maturation phase. Optimum degree of maturity was also appraised by the Germination Index, 98.25% was attained by T2, whereas 88.65% and 71.23% by T1 and T, respectively. Significant Pearson correlation was also found between compost characteristics such as C/N, CEC, HA, FA, DP, HI, and HR. In addition, also obstinate the mineralization's of nitrogen under laboratory incubation, using soil amended by 50 and 100 kg-N/ha and examined an increasing trend in nitrogen mineralization with the application rate. Moreover, it was concluded that the laccase inducers increase the disintegration and humification process during solid waste composting.
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Affiliation(s)
- Amana Nadeem
- a Department of Zoology , GC University , Faisalabad , Pakistan
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FENG X, CHEN H, XUE D, YAO S. Enhancement of Laccase Activity by Marine-derived Deuteromycete Pestalotiopsis sp. J63 with Agricultural Residues and Inducers. Chin J Chem Eng 2013. [DOI: 10.1016/s1004-9541(13)60567-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Stella T, Covino S, Křesinová Z, D'Annibale A, Petruccioli M, Čvančarová M, Cajthaml T. Chlorobenzoic acid degradation by Lentinus (Panus) tigrinus: in vivo and in vitro mechanistic study-evidence for P-450 involvement in the transformation. JOURNAL OF HAZARDOUS MATERIALS 2013; 260:975-983. [PMID: 23892164 DOI: 10.1016/j.jhazmat.2013.07.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Revised: 07/02/2013] [Accepted: 07/03/2013] [Indexed: 06/02/2023]
Abstract
Aim of this work was to investigate the ability of Lentinus (Panus) tigrinus to degrade and detoxify a chlorobenzoate (CBA) mixture composed of mono-, di- and tri-chlorinated isomers. The degradation process was investigated as a function of both the growing medium (i.e. low N Kirk's and malt extract-glucose medium) and cultivation conditions (i.e. stationary and shaken cultures). The majority of CBAs were quantitatively degraded within the early 15 d from spiking with the notable exception of the double ortho-chlorinated compounds, 2,6-di-, 2,3,6-tri- and 2,4,6-tri-CBA. Analysis of the degradation intermediates indicated the occurrence of side chain reduction, hydroxylation and methylation reactions. Although CBAs stimulated laccase production, in vitro experiments with a purified L. tigrinus laccase isoenzyme demonstrated its inability to participate in the initial attack on CBAs even in the presence of redox mediators; similar results were found with a Mn-peroxidase isoenzyme. Conversely, prompt degradation was observed upon 1h incubation of CBAs with a purified microsomal fraction containing cytochrome P-450 monooxygenase. The nature of some reaction products (i.e. hydroxylated derivatives), the dependency of the reaction on NADPH and its susceptibility to either CO or piperonyl butoxide inhibition confirmed the involvement of L. tigrinus cytochrome P-450 in the early steps of CBA degradation.
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Affiliation(s)
- T Stella
- Institute of Microbiology, v.v.i., Academy of Sciences of the Czech Republic, Vídeňská 1083, CZ-142 20 Prague 4, Czech Republic
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Aranganathan V, Kanimozhi AM, Palvannan T. STATISTICAL OPTIMIZATION OF SYNTHETIC AZO DYE (ORANGE II) DEGRADATION BY AZOREDUCTASE FROM Pseudomonas oleovorans PAMD_1. Prep Biochem Biotechnol 2013; 43:649-67. [DOI: 10.1080/10826068.2013.772063] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- V. Aranganathan
- a Department of Biochemistry , Center for Postgraduate Studies, Jain University , Bangalore , Karnataka , India
| | - A. M. Kanimozhi
- b Department of Biotechnology , St. Joseph's College for Women , Hosur , Tamilnadu , India
| | - T. Palvannan
- c Department of Biochemistry , Periyar University , Salem , Tamilnadu , India
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Casas N, Blánquez P, Vicent T, Sarrà M. Laccase production by Trametes versicolor under limited-growth conditions using dyes as inducers. ENVIRONMENTAL TECHNOLOGY 2013; 34:113-119. [PMID: 23530321 DOI: 10.1080/09593330.2012.683820] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Laccase production by pre-growth pellets of Trametes versicolor using two types of textile dyes as inducers was studied. By decoupling the enzyme production phase from the growth phase, it is possible to reduce the time and nutrients required for laccase production. At the glucose maintenance level, the effect of the nitrogen source and textile dye was analysed using response surface methodology. Ammonium chloride was used as the inorganic nitrogen source. Two types of dyes were tested: Grey Lanaset G (GLG), a metal complex dye mixture containing nitrogen; and Alizarin Red (AR), an anthraquinonic dye with no nitrogen in its chemical structure. GLG induces laccase production at a higher extent than AR. Despite the limiting conditions required for the production of laccase, enzyme production increases with increasing ammonium chloride. When AR, the N-free dye, was used as an inducer, the optimal supply of N for laccase production was 1.2 mg/(g dry cell weight x d) as ammonium chloride. The reuse of fungal pellets in the repeated-batch mode under maintenance conditions was found to be a good strategy for improving laccase production, as enzyme production increased to up to seven times the production of the first cycle. It was demonstrated that GLG can be used as an inducer and as an N source and, thus, it is possible to decolorize the dye and to induce laccase production at the same time without adding an extra N source.
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Affiliation(s)
- N Casas
- Departament d'Enginyeria Química, Escola d'Enginyeria, Universitat Autónoma de Barcelona, 08193 Bellaterra, Barcelona, Spain
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Babič J, Likozar B, Pavko A. Optimization of ligninolytic enzyme activity and production rate with Ceriporiopsis subvermispora for application in bioremediation by varying submerged media composition and growth immobilization support. Int J Mol Sci 2012; 13:11365-11384. [PMID: 23109859 PMCID: PMC3472751 DOI: 10.3390/ijms130911365] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2012] [Revised: 08/23/2012] [Accepted: 09/05/2012] [Indexed: 11/21/2022] Open
Abstract
Response surface methodology (central composite design of experiments) was employed to simultaneously optimize enzyme production and productivities of two ligninolytic enzymes produced by Ceriporiopsis subvermispora. Concentrations of glucose, ammonium tartrate and Polysorbate 80 were varied to establish the optimal composition of liquid media (OLM), where the highest experimentally obtained activities and productivities were 41 U L−1 and 16 U L−1 day−1 for laccase (Lac), and 193 U L−1 and 80 U L−1 day−1 for manganese peroxidase (MnP). Considering culture growth in OLM on various types of immobilization support, the best results were obtained with 1 cm beech wood cubes (BWCM). Enzyme activities in culture filtrate were 152 U L−1 for Lac and 58 U L−1 for MnP, since the chemical composition of this immobilization material induced higher Lac activity. Lower enzyme activities were obtained with polyurethane foam. Culture filtrates of OLM and BWCM were applied for dye decolorization. Remazol Brilliant Blue R (RBBR) was decolorized faster and more efficiently than Copper(II)phthalocyanine (CuP) with BWCM (80% and 60%), since Lac played a crucial role. Decolorization of CuP was initially faster than that of RBBR, due to higher MnP activities in OLM. The extent of decolorization after 14 h was 60% for both dyes.
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Affiliation(s)
- Janja Babič
- Chair of Chemical, Biochemical and Environmental Engineering, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Aškerčeva 5, 1000 Ljubljana, Slovenia; E-Mail:
| | - Blaž Likozar
- Laboratory of Catalysis and Chemical Reaction Engineering, National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia; E-Mail:
| | - Aleksander Pavko
- Chair of Chemical, Biochemical and Environmental Engineering, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Aškerčeva 5, 1000 Ljubljana, Slovenia; E-Mail:
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +386-1-24-19-506; Fax: +386-1-24-19-530
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Aghaie-Khouzani M, Forootanfar H, Moshfegh M, Khoshayand M, Faramarzi M. Decolorization of some synthetic dyes using optimized culture broth of laccase producing ascomycete Paraconiothyrium variabile. Biochem Eng J 2012. [DOI: 10.1016/j.bej.2011.09.002] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Diwaniyan S, Sharma KK, Kuhad RC. Laccase from an alkalitolerant basidiomycetes Crinipellis sp. RCK-1: Production optimization by response surface methodology. J Basic Microbiol 2011; 52:397-407. [DOI: 10.1002/jobm.201100018] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2011] [Accepted: 07/06/2011] [Indexed: 11/09/2022]
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Rajeeva S, Lele S. Three-phase partitioning for concentration and purification of laccase produced by submerged cultures of Ganoderma sp. WR-1. Biochem Eng J 2011. [DOI: 10.1016/j.bej.2011.02.006] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Biochemical and molecular characterization of Coriolopsis rigida laccases involved in transformation of the solid waste from olive oil production. Appl Microbiol Biotechnol 2010; 88:133-42. [DOI: 10.1007/s00253-010-2723-z] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2010] [Revised: 06/01/2010] [Accepted: 06/04/2010] [Indexed: 10/19/2022]
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Palvannan T, Sathishkumar P. Production of laccase from Pleurotus florida
NCIM 1243 using Plackett-Burman Design and Response Surface Methodology. J Basic Microbiol 2010; 50:325-35. [DOI: 10.1002/jobm.200900333] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Hailei W, Ping L, Min P, Zhijun Z, Guangli Y, Guosheng L, Jianming Y. Rapid decolourization of azo dyes by a new isolated higher manganese peroxidase producer: Phanerochaete sp. HSD. Biochem Eng J 2009. [DOI: 10.1016/j.bej.2009.06.008] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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