Development of lignocellulosic biorefineries for the sustainable production of biofuels: Towards circular bioeconomy

Systems Metabolic Engineering of Genome-Reduced Pseudomonas putida for Efficient Production of Polyhydroxyalkanoate from p-Coumaric Acid

Pseudomonas putida KT2440, which harbors native aromatic catabolic pathways, has emerged as a cell factory for funnelling lignin derivatives to medium-chain-length polyhydroxyalkanoates (mcl-PHA). To enhance this bioconversion, we engineered the genome-reduced strain P. putida KTU-U27 (with higher PHA productivity than its parental strain KT2440) to further enhance mcl-PHA synthesis from the lignin-derived aromatic compound p-coumaric acid (p-CA). Three targeted strategies were employed: (i) blocking PHA degradation via deletion of phaZ; (ii) suppressing β-oxidation by deleting fadBA1 and fadBA2; and (iii) enhancing biosynthesis through overexpression of phaC1 and alkK, resulting in the engineered strain KTU-U27ΔZ2BA-P46C1K. Subsequent optimization of the carbon-to-nitrogen (C/N) ratio and high-density fed-batch fermentation further improved PHA productivity. To adapt the substrate toxicity, strain tolerance toward p-CA was augmented by overexpressing the ttg2ABCDE operon and the vacJ gene. Under optimized fed-batch fermentation conditions (initial C/N ratio of 8:4), the final strain KTU-U27ΔZ2BA-P46C1K-P46TJ achieved a cell dry weight of 2050 mg/L with a PHA content of 82.19 wt %, corresponding to a PHA yield of 1685 mg/L, which is the highest reported to date using p-CA as the sole carbon source. This integrated approach of combining genome reduction, metabolic engineering, and bioprocess optimization, provides a scalable platform for mcl-PHA production from lignin-derived aromatics, highlighting the potential of KTU-U27-based chassis for cost-effective lignin valorization.

Advancements in lignocellulosic biorefining: An integrated approach for achieving complete conversion of unsterilized peanut shells into high-titer ethanol and succinic acid

The inefficient utilization of carbon sources poses a critical bottleneck in lignocellulose biorefinery processes. This study aimed to devise an integrated approach for efficiently releasing the fermentable sugars from pretreated peanut shells, and subsequently converting the hexoses and pentoses into ethanol and succinic acid (SA), while minimizing carbon dioxide emissions. An enhanced cellulolytic enzyme catalytic system (CECS) has been developed through the optimization of accessory enzymes and additives. This system synergistically boosted both the thermal stability and catalytic activity of the cellulase, and enhanced the glucose yield by 15.95 % at a substrate loading of 10 % (w/v). The implementation of a fed-batch strategy improved the efficiency of high-solids (25 % w/v) enzymatic hydrolysis, when it was integrated with the developed CECS, a remarkable glucose yield of up to 79.40 % was achieved. The semi-simultaneous saccharification, in conjunction with a step-wise fermentation process, enabled the efficient conversion of pentoses and hexoses from pretreated peanut shells into high titers of ethanol (83.13 g/L) and SA (45.21 g/L) under non-sterilized conditions. This approach achieved conversion rates of up to 41.10 g ethanol and 100.57 g SA per kilogram of peanut shells raw material, while effectively mitigating carbon dioxide emissions during the process.

Eco-friendly nanomaterials derived from lignocellulosic macromolecules for dual applications in geological waste and water treatment

Lignocellulosic macromolecules, which make up 50-80 % of Earth's biomass, include cellulose, hemicellulose, and lignin. Plants produce over 200 billion tons of biomass. Nanomaterials (NMs) sourced from these sustainable macromolecules are emerging as effective solutions for challenges in water treatment and geological waste management. The adsorption capabilities of lignocellulose-based nanomaterials enable the effective removal of 95 % of heavy metals and radionuclides from contaminated soils and geological waste, significantly lowering environmental risks by over 80 %. These materials can achieve an adsorption capacity of up to 600 mg/g for contaminants, including dyes, heavy metals such as lead and cadmium, and organic pollutants like pharmaceuticals and pesticides in water treatment applications. Under optimal conditions, it achieves a removal efficiency of 99 %. Carboxyl and amine-functionalized lignocellulosic nanostructures can show an adsorption rate of up to 40-60 % that can make them more susceptible to targeting specific contaminants. The two materials can be compared, and life cycle assessments may suggest that the use of Lignocellulosic Nanomaterials (LCNMs) is more environmentally friendly than synthetic materials because the former is biodegradable and nontoxic. The major challenges of commercializing these materials are low production cost and long-term stability. This study examines how nanomaterials extracted from lignocellulose are developed alongside operational aspects and ecological effects with specific attention on their ability to deal with worldwide waste and water pollution issues. The research outcomes indicate that these materials have promising applications for green environmental technologies but suggest new solutions to solve existing limitations.

Bioprocessing of pineapple leaf waste biomass using an integrated ultrasound-deep eutectic solvent pretreatment approach for improved bioethanol production

Biorefineries play a crucial role in advancing the circular bioeconomy by integrating the environmental and socio-economic dimensions of the industrial sector. This study investigated the potential of integrated ultrasound (UL)-deep eutectic solvent (DES, choline chloride/glycerol) pretreatment of pineapple leaf (PL) waste for efficient bioethanol production, emphasizing its sustainability and environmental benefits. The pretreatment conditions were optimized using response surface methodology, with variables including ultrasound amplitude (45%), time (30min), and solid loading (10%, w/w). The solid PL biomass was physico-chemically characterized, revealing prominent variations in functional groups, surface morphology, crystallinity, and surface area across samples subjected to individual and integrated pretreatment approaches. A high reducing sugar yield of 324.41mg/g PL biomass was recovered after enzymatic hydrolysis of integrated UL-ChCl/glycerol pretreated PL samples under optimized conditions. The fermentation of the sugar hydrolysate yielded a 121.36mg/g ethanol with 89.61% fermentation efficiency. Notably, DES recyclability experiments indicated significant performance up to the third cycle, after which activity marginally declined in correlation with sugar yield. The synergistic UL-ChCl/glycerol pretreatment process supports circular bioeconomy by promoting sustainable biomass conversion and offering a promising approach to reducing environmental impacts by utilizing agricultural waste for renewable energy production.

Deep eutectic solvents assisted laccase pretreatment for improving enzymatic hydrolysis of corn stover

The efficient and eco-friendly removal of lignin is a critical challenge for bioethanol production from lignocellulosic biomass. Herein, we report the integration of laccase with deep eutectic solvents (DESs) for the pretreatment of corn stover to enhance the production of reducing sugars. Three betaine-based DESs were prepared and tested for their effects on the activity and stability of a bacterial laccase from Bacillus amyloliquefaciens LC02. The aqueous solution of DESs showed no adverse influence on laccase activity, and the laccase thermostability was improved in the presence of DESs. More than 95% of the laccase activity was retained in the DESs solution during the first hour of incubation at 70 °C. A red shift in the fluorescence spectra was observed for the laccase in the presence of DESs, indicating conformational changes. The laccase was able to degrade a dimeric lignin model compound by cleaving its β-O-4 bond. The transformation products were identified using LC-MS. The maximal lignin removal from corn stover was achieved by pretreatment using laccase in combination with the betaine-glycerol DES, which also resulted in a yield of fermentable sugar that was 130% higher than the control. This combination strategy provides guidance on the application of laccase and DESs in the pretreatment of lignocellulosic biomass.

Harnessing Artificial Intelligence for Sustainable Bioenergy: Revolutionizing Optimization, Waste Reduction, and Environmental Sustainability

Assessing the mutual benefits of artificial intelligence (AI) and bioenergy systems, to promote efficient and sustainable energy production. By addressing issues with conventional bioenergy techniques, it highlights how AI is revolutionising optimisation, waste reduction, and environmental sustainability. With its capacity for intelligent decision-making, predictive modelling, and adaptive controls to maximise bioenergy processes, artificial intelligence (AI) emerges as a crucial catalyst for overcoming these obstacles. The focus on particular uses of AI to enhance bioenergy systems. Algorithms for machine learning are essential for forecasting biomass properties, selecting feedstock optimally, and enhancing energy conversion procedures in general. Enhancing real-time adaptability and guaranteeing optimal performance under a range of operational conditions is made possible by the integration of AI-driven monitoring and control systems. Additionally, it looks at how AI supports precision farming methods in bioenergy settings, enhancing crop management strategies and increasing the output of biofuels. AI-guided autonomous systems help with precision planting, harvesting, and processing, which reduces resource use and maximises yield. AI's contribution to advanced biofuel technology by using data analytics and computational models, it can hasten the creation of new, more effective bioenergy sources. AI-driven grid management advancements could guarantee the smooth integration of bioenergy into current energy infrastructures. The revolutionary role that artificial intelligence (AI) has played in bioenergy systems, making a strong case for the incorporation of AI technologies to drive the global energy transition towards a more ecologically conscious and sustainable future.

Biorefinery of Lignocellulosic and Marine Resources for Obtaining Active PVA/Chitosan/Phenol Films for Application in Intelligent Food Packaging

This study focuses on the extraction of phenolic compounds from the fermentation of Phanerochaete chrysosporium and Gloeophyllum trabeum. The main goal was to synthesize phenol/chitosan microspheres and PVA films and characterized using FTIR, TGA, DSC, SEM, and mechanical tests to evaluate their physical, chemical, and mechanical properties for antimicrobial packaging applications. Homogeneous chitosan microspheres loaded with lignin-derived phenols were obtained, showing controlled release of antimicrobial compounds. The incorporation of phenolic microspheres into PVA/chitosan films resulted in significant improvements in mechanical properties: the films exhibited an elastic modulus of 36.14 ± 3.73 MPa, tensile strength of 12.01 ± 1.14 MPa, and elongation at break of 65.19 ± 5.96%. Thermal tests revealed that chitosan-containing films had enhanced thermal stability, with decomposition temperatures (T10) reaching 116.77 °C, compared to 89.28 °C for pure PVA. In terms of antimicrobial activity, PVA/chitosan/phenol films effectively reduced Lactobacillus growth and milk acidity, maintaining quality for up to 96 h at room temperature, outperforming controls with acetic acid and H2O2. The films also inhibit yeast growth for one week. In conclusion, phenols can be effective antimicrobial agents in dairy, but their use should be monitored. Additionally, PVA/chitosan-phenol films offer biodegradability, antimicrobial properties, and sustainability for diverse applications.

Biobased heterogeneous renewable catalysts: Production technologies, innovations, biodiesel applications and circular bioeconomy

The growing population and waste biomass accumulation are leading to increased environmental pollution and climate change. Waste biomass comprising of nutrient rich components has promising potential to produce value-added products for sustainable environmental solutions. This review explores the critical role of bio-based heterogeneous catalysts in enabling sustainable waste biomass utilization. In industrial chemical transformations, over 95% involve catalysts, with more than 90% being heterogeneous systems, prized for their robustness, ease of product separation, and reusability. Bio-based heterogeneous catalysts address the pressing need for sustainable waste biomass management, allowing the conversion of diverse waste biomasses into biodiesel as valuable products. Research on these catalysts, particularly for biodiesel production, has shown yields exceeding 90% with enhanced catalyst reusability. This surge in research is evident from the increasing number of published articles, notably in 2022 and 2023, highlighting growing interest and importance in the scientific community. The synthesis of these catalysts is examined, including novel approaches and techniques to enhance their efficiency, selectivity, and stability. The challenges with their feasible solutions of heterogeneous catalysts in catalyst-based processes are addressed. Altogether, this review underscores the immense potential of bio-based heterogeneous catalysts in sustainable waste biomass utilization, aligning with resource efficiency and environmental conservation goals while offering distinct insights and perspectives on the latest innovations in the field.

Establishment of low-cost production platforms of polyhydroxyalkanoate bioplastics from Halomonas cupida J9

Microbial production of polyhydroxyalkanoate (PHA) is greatly restricted by high production cost arising from high-temperature sterilization and expensive carbon sources. In this study, a low-cost PHA production platform was established from Halomonas cupida J9. First, a marker-less genome-editing system was developed in H. cupida J9. Subsequently, H. cupida J9 was engineered to efficiently utilize xylose for PHA biosynthesis by introducing a new xylose metabolism module and blocking xylonate production. The engineered strain J9UΔxylD-P8xylA has the highest PHA yield (2.81 g/L) obtained by Halomonas with xylose as the sole carbon source so far. This is the first report on the production of short- and medium-chain-length (SCL-co-MCL) PHA from xylose by Halomonas. Interestingly, J9UΔxylD-P8xylA was capable of efficiently utilizing glucose and xylose as co-carbon sources for PHA production. Furthermore, fed-batch fermentation of J9UΔxylD-P8xylA coupled to a glucose/xylose co-feeding strategy reached up to 12.57 g/L PHA in a 5-L bioreactor under open and unsterile condition. Utilization of corn straw hydrolysate as the carbon source by J9UΔxylD-P8xylA reached 7.0 g/L cell dry weight (CDW) and 2.45 g/L PHA in an open fermentation. In summary, unsterile production in combination with inexpensive feedstock highlights the potential of the engineered strain for the low-cost production of PHA from lignocellulose-rich agriculture waste.

Co-production of fermentable sugars and highly active lignin from eucalyptus via a mild preprocessing with diethylene glycol and chromic chloride

Eucalyptus was pretreated with diethylene glycol catalyzed by 0.02 mol/L CrCl3 for 10 min, resulting in 91 % delignification and 98 % cellulose recovery, with trace fermentation inhibitors generated. After the mild pretreatment, the accessibility and affinity of cellulase to eucalyptus was enhanced, especially since enzyme adsorption rate increased by 1.6-fold. Therefore, glucose yield of pretreated eucalyptus was 7.9-fold higher than that of untreated eucalyptus after hydrolyzed 48 h, in which the maximum glucose concentration reached 62 g/L from eucalyptus by adding Tween 80. According to the characterization analysis, the structure of the eucalyptus lignin-carbohydrate complexes structure was destroyed during the pretreatment, while lignin fragments was likely reacted with diethylene glycol to form the stabilized aromatic ethers. Moreover, the extracted Deg-lignin exhibited better performances than commercial alkali lignin such as higher fluorescence intensity, less negative surface charge, and lower particle size. The mild pretreatment method with diethylene glycol and CrCl3 provided a promising approach for co-production of fermentable sugars and high activity lignin from lignocellulosic biomass.

The outlooks and key challenges in renewable biomass feedstock utilization for value-added platform chemical via bioprocesses

The conversion of renewable biomass feedstock into value-added products via bioprocessing platforms has become attractive because of environmental and health concerns. Process performance and cost competitiveness are major factors in the bioprocess design to produce desirable products from biomass feedstock. Proper pretreatment allows delignification and hemicellulose removal from the liquid fraction, allowing cellulose to be readily hydrolyzed to monomeric sugars. Several industrial products are produced via sugar fermentation using either naturally isolated or genetically modified microbes. Microbial platforms play an important role in the synthesis of several products, including drop-in chemicals, as-in products, and novel compounds. The key elements in developing a fermentation platform are medium formulation, sterilization, and active cells for inoculation. Downstream bioproduct recovery may seem like a straightforward chemical process, but is more complex, wherein cost competitiveness versus recovery performance becomes a challenge. This review summarizes the prospects for utilizing renewable biomass for bioprocessing.

Synergistic microwave and acidic deep eutectic solvent-based pretreatment of Theobroma cacao pod husk biomass for xylooligosaccharides production

The bioconversion of lignocellulosic biomass into novel bioproducts is crucial for sustainable biorefineries, providing an integrated solution for circular economy objectives. The current study investigated a novel microwave-assisted acidic deep eutectic solvent (DES) pretreatment of waste cocoa pod husk (CPH) biomass to extract xylooligosaccharides (XOS). The sequential DES (choline chloride/citric acid, molar ratio 1:1) and microwave (450W) pretreatment of CPH biomass was effective in 67.3% xylan removal with a 52% XOS yield from total xylan. Among different XOS of varying degrees of polymerization, a higher xylobiose content corresponding to 69.3% of the total XOS (68.22 mg/g CPH) from liquid fraction was observed. Enzymatic hydrolysis of residual xylan from pretreated CPH biomass with low commercial xylanase (10 IU/g) concentration yielded 24.2% XOS. The MW-ChCl/citric acid synergistic pretreatment approach holds great promise for developing a cost-effective and environmentally friendly method contributing to the sustainable production of XOS from agricultural waste streams.

Heavy metals/-metalloids (As) phytoremediation with Landoltia punctata and Lemna sp. (duckweeds): coupling with biorefinery prospects for sustainable phytotechnologies

Heavy metals/-metalloids can result in serious human health hazards. Phytoremediation is green bioresource technology for the remediation of heavy metals and arsenic (As). However, there exists a knowledge gap and systematic information on duckweed-based metal phytoremediation in an eco-sustainable way. Therefore, the present review offers a critical discussion on the effective use of duckweeds (genera Landoltia and Lemna)-based phytoremediation to decontaminate metallic contaminants from wastewater. Phytoextraction and rhizofiltration were the major mechanism in 'duckweed bioreactors' that can be dependent on physico-chemical factors and plant-microbe interactions. The biotechnological advances such as gene manipulations can accelerate the duckweed-based phytoremediation process. High starch and protein contents of the metal-loaded duckweed biomass facilitate their use as feedstock in biorefinery. Biorefinery prospects such as bioenergy production, value-added products, and biofertilizers can augment the circular economy approach. Coupling duckweed-based phytoremediation with biorefinery can help achieve Sustainable Development Goals (SDGs) and human well-being.

Utilization of agricultural wastes for co-production of xylitol, ethanol, and phenylacetylcarbinol: A review

Corn, rice, wheat, and sugar are major sources of food calories consumption thus the massive agricultural waste (AW) is generated through agricultural and agro-industrial processing of these raw materials. Biological conversion is one of the most sustainable AW management technologies. The abundant supply and special structural composition of cellulose, hemicellulose, and lignin could provide great potential for waste biological conversion. Conversion of hemicellulose to xylitol, cellulose to ethanol, and utilization of remnant whole cells biomass to synthesize phenylacetylcarbinol (PAC) are strategies that are both eco-friendly and economically feasible. This co-production strategy includes essential steps: saccharification, detoxification, cultivation, and biotransformation. In this review, the implemented technologies on each unit step are described, the effectiveness, economic feasibility, technical procedures, and environmental impact are summarized, compared, and evaluated from an industrial scale viewpoint.

Bacterial cellulose/gum Arabic composite production by in-situ modification from lavender residue hydrolysate

In this study, bacterial cellulose/gum Arabic composite (BC/GA) was synthesized by in-situ modification from lavender residue hydrolysate for the first time. The in-situ modification with GA adding showed great beneficial effect for BC/GA synthesis. Both the product (BC or BC/GA) yield and the product (BC or BC/GA) production per sugars consumption increased greatly by the in-situ modification when compared with the fermentation without GA adding (2.90 g/L vs. 0.91 g/L, and 0.461 g/g vs. 0.138 g/g). It is hypothesized that the combination of BC and GA is the main mechanism for the beneficial effect of the in-situ modification, and the scanning electron microscope (SEM) images confirmed this hypothesis. GA adding showed little effect on the rheological properties of lavender residue hydrolysate, and this environment was suitable for the combination of BC and GA. The in-situ modification had an obvious influence on the crystallinity index and the thermal stability of BC/GA, but affected little on its functional groups and cellulose structural framework. Besides BC/GA synthesis and structure, the in-situ modification could also alter the texture properties of BC/GA. Overall, this study can offer some useful information for the biochemical conversion from green and cost-effective lavender residue hydrolysate to attractive biomaterial BC/GA.

Cellulase immobilization to enhance enzymatic hydrolysis of lignocellulosic biomass: An all-inclusive review

Cellulase-mediated lignocellulosic biorefinery plays a crucial role in the production of high-value biofuels and chemicals, with enzymatic hydrolysis being an essential component. The advent of cellulase immobilization has revolutionized this process, significantly enhancing the efficiency, stability, and reusability of cellulase enzymes. This review offers a thorough analysis of the fundamental principles underlying immobilization, encompassing various immobilization approaches such as physical adsorption, covalent binding, entrapment, and cross-linking. Furthermore, it explores a diverse range of carrier materials, including inorganic, organic, and hybrid/composite materials. The review also focuses on emerging approaches like multi-enzyme co-immobilization, oriented immobilization, immobilized enzyme microreactors, and enzyme engineering for immobilization. Additionally, it delves into novel carrier technologies like 3D printing carriers, stimuli-responsive carriers, artificial cellulosomes, and biomimetic carriers. Moreover, the review addresses recent obstacles in cellulase immobilization, including molecular-level immobilization mechanism, diffusion limitations, loss of cellulase activity, cellulase leaching, and considerations of cost-effectiveness and scalability. The knowledge derived from this review is anticipated to catalyze the evolution of more efficient and sustainable biocatalytic systems for lignocellulosic biomass conversion, representing the current state-of-the-art in cellulase immobilization techniques.

Meyerozyma caribbica Isolated from Vinasse-Irrigated Sugarcane Plantation Soil: A Promising Yeast for Ethanol and Xylitol Production in Biorefineries

The production of fuels and other industrial products from renewable sources has intensified the search for new substrates or for the expansion of the use of substrates already in use, as well as the search for microorganisms with different metabolic capacities. In the present work, we isolated and tested a yeast from the soil of sugarcane irrigated with vinasse, that is, with high mineral content and acidic pH. The strain of Meyerozyma caribbica URM 8365 was able to ferment glucose, but the use of xylose occurred when some oxygenation was provided. However, some fermentation of xylose to ethanol in oxygen limitation also occurs if glucose was present. This strain was able to produce ethanol from molasses substrate with 76% efficiency, showing its tolerance to possible inhibitors. High ethanol production efficiencies were also observed in acidic hydrolysates of each bagasse, sorghum, and cactus pear biomass. Mixtures of these substrates were tested and the best composition was found for the use of excess plant biomass in supplementation of primary substrates. It was also possible to verify the production of xylitol from xylose when the acetic acid concentration is reduced. Finally, the proposed metabolic model allowed calculating how much of the xylose carbon can be directed to the production of ethanol and/or xylitol in the presence of glucose. With this, it is possible to design an industrial plant that combines the production of ethanol and/or xylitol using combinations of primary substrates with hydrolysates of their biomass.

Bioprocess development for the production of xylooligosaccharide prebiotics from agro-industrial lignocellulosic waste

The development of sustainable biorefineries and bioeconomy has been the mandate of most of the governments with major focus on restricting the climate change concerns and finding new strategies to maintain the global food supply chain. Xylooligosaccharides (XOS) are short-chain oligomers which due to their excellent prebiotic potential in the nutraceutical sector has attracted intense research focus in the recent years. The agro-industrial crop and food waste can be utilized for the production of XOS which are derived from hemicellulose fraction (xylan) of the lignocellulosic materials. The extraction of xylan, is traditionally achieved by acidic and alkaline pretreatments which, however, have limited industrial applications. The inclusion of cutting-edge and environmentally beneficial pretreatment methods and technologies such as deep eutectic solvents and green catalysts are preferred. Moreover, the extraction of xylans from biomass using combinatorial pretreatment approaches may help in economizing the whole bioprocess. The current review outlines the factors involved in the xylan extraction and depolymerization processes from different lignocellulosic biomass and the subsequent enzymatic hydrolysis for XOS production. The different types of oligosaccharides and their prebiotic potential for the growth of healthy gut bacteria have also been explained. The introduction of modern molecular technologies has also made it possible to identify enzymes and microorganisms with the desired characteristics for usage in XOS industrial production processes.

Lignocellulosic biorefineries: A multiscale approach for resource exploitation

Biomass can become the source for chemicals towards a sustainable production system. However, the challenges it presents such as the variety of species, their widespread and sparse availability, and the expensive transportation claims for an integrated approach to design the novel production system. Multiscale approaches have not been properly extended to biorefineryes design and deployment, due to the comprehensive experimental and modelling work they require. A systems perspective provides the systematic framework to analyze the availability and composition of raw materials across regions, how that affects process design, the portfolio of products that can be obtained by evaluating the strong link between the biomass features and the process design. The use of lignocellulosic materials requires for a multidisciplinary work, that must lead to new process engineers with technical competences in biology, biotechnology but also process engineering, mathematics, computer science and social sciences towards a sustainable process/chemical industry.