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Tian YY, Tong JB, Liu Y, Tian Y. QSAR Study, Molecular Docking and Molecular Dynamic Simulation of Aurora Kinase Inhibitors Derived from Imidazo[4,5- b]pyridine Derivatives. Molecules 2024; 29:1772. [PMID: 38675594 PMCID: PMC11052498 DOI: 10.3390/molecules29081772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2024] [Revised: 04/03/2024] [Accepted: 04/05/2024] [Indexed: 04/28/2024] Open
Abstract
Cancer is a serious threat to human life and social development and the use of scientific methods for cancer prevention and control is necessary. In this study, HQSAR, CoMFA, CoMSIA and TopomerCoMFA methods are used to establish models of 65 imidazo[4,5-b]pyridine derivatives to explore the quantitative structure-activity relationship between their anticancer activities and molecular conformations. The results show that the cross-validation coefficients q2 of HQSAR, CoMFA, CoMSIA and TopomerCoMFA are 0.892, 0.866, 0.877 and 0.905, respectively. The non-cross-validation coefficients r2 are 0.948, 0.983, 0.995 and 0.971, respectively. The externally validated complex correlation coefficients r2pred of external validation are 0.814, 0.829, 0.758 and 0.855, respectively. The PLS analysis verifies that the QSAR models have the highest prediction ability and stability. Based on these statistics, virtual screening based on R group is performed using the ZINC database by the Topomer search technology. Finally, 10 new compounds with higher activity are designed with the screened new fragments. In order to explore the binding modes and targets between ligands and protein receptors, these newly designed compounds are conjugated with macromolecular protein (PDB ID: 1MQ4) by molecular docking technology. Furthermore, to study the nature of the newly designed compound in dynamic states and the stability of the protein-ligand complex, molecular dynamics simulation is carried out for N3, N4, N5 and N7 docked with 1MQ4 protease structure for 50 ns. A free energy landscape is computed to search for the most stable conformation. These results prove the efficient and stability of the newly designed compounds. Finally, ADMET is used to predict the pharmacology and toxicity of the 10 designed drug molecules.
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Affiliation(s)
- Yang-Yang Tian
- College of Petroleum Engineering, Xi’an Shiyou University, Xi’an 710065, China;
- Shaanxi Key Laboratory of Advanced Stimulation Technology for Oil & Gas Reservoirs, Xi’an 710065, China
| | - Jian-Bo Tong
- College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi’an 710021, China; (Y.L.); (Y.T.)
| | - Yuan Liu
- College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi’an 710021, China; (Y.L.); (Y.T.)
| | - Yu Tian
- College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi’an 710021, China; (Y.L.); (Y.T.)
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2
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Peytam F, Emamgholipour Z, Mousavi A, Moradi M, Foroumadi R, Firoozpour L, Divsalar F, Safavi M, Foroumadi A. Imidazopyridine-based kinase inhibitors as potential anticancer agents: A review. Bioorg Chem 2023; 140:106831. [PMID: 37683538 DOI: 10.1016/j.bioorg.2023.106831] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 08/16/2023] [Accepted: 08/30/2023] [Indexed: 09/10/2023]
Abstract
Considering the fundamental role of protein kinases in the mechanism of protein phosphorylation in critical cellular processes, their dysregulation, especially in cancers, has underscored their therapeutic relevance. Imidazopyridines represent versatile scaffolds found in abundant bioactive compounds. Given their structural features, imidazopyridines have possessed pivotal potency to interact with different protein kinases, inspiring researchers to carry out numerous structural variations. In this comprehensive review, we encompass an extensive survey of the design and biological evaluations of imidazopyridine-based small molecules as potential agents targeting diverse kinases for anticancer applications. We describe the structural elements critical to inhibitory potency, elucidating their key structure-activity relationships (SAR) and mode of actions, where available. We classify these compounds into two groups: Serine/threonine and Tyrosine inhibitors. By highlighting the promising role of imidazopyridines in kinase inhibition, we aim to facilitate the design and development of more effective, targeted compounds for cancer treatment.
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Affiliation(s)
- Fariba Peytam
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Zahra Emamgholipour
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Alireza Mousavi
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Mahfam Moradi
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Roham Foroumadi
- Department of Pharmacology, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran
| | - Loghman Firoozpour
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
| | - Fatemeh Divsalar
- Neuroscience Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran
| | - Maliheh Safavi
- Department of Biotechnology, Iranian Research Organization for Science and Technology, Tehran, Iran
| | - Alireza Foroumadi
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran; Neuroscience Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran; Drug Design and Development Research Center, The Institute of Pharmaceutical Sciences (TIPS), Tehran University of Medical Sciences, Tehran, Iran.
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3
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Pelosi AG, Zucolotto Cocca LH, Piguel S, De Boni L, Mendonça CR. Effect of peripherical groups on the two-photon brightness of (E)-3-benzyl-6-bromo-2-styryl-3H-imidazo[4,5-b]pyridine derivatives. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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4
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Zucolotto Cocca LH, Pelosi A, Sciuti LF, M. G. Abegão L, Kamada K, Piguel S, Renato Mendonça C, De Boni L. Two-photon brightness of highly fluorescent imidazopyridine derivatives: Two-photon and ultrafast transient absorption studies. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2021.118379] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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5
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Lončar B, Perin N, Mioč M, Boček I, Grgić L, Kralj M, Tomić S, Stojković MR, Hranjec M. Novel amino substituted tetracyclic imidazo[4,5-b]pyridine derivatives: Design, synthesis, antiproliferative activity and DNA/RNA binding study. Eur J Med Chem 2021; 217:113342. [PMID: 33751978 DOI: 10.1016/j.ejmech.2021.113342] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 02/25/2021] [Accepted: 02/26/2021] [Indexed: 02/06/2023]
Abstract
A novel series of tetracyclic imidazo[4,5-b]pyridine derivatives was designed and synthesized as potential antiproliferative agents. Their antiproliferative activity against human cancer cells was influenced by the introduction of chosen amino side chains on the different positions on the tetracyclic skeleton and particularly, by the position of N atom in the pyridine nuclei. Thus, the majority of compounds showed improved activity in comparison to standard drug etoposide. Several compounds showed pronounced cytostatic effect in the submicromolar range, especially on HCT116 and MCF-7 cancer cells. The obtained results have confirmed the significant impact of the position of N nitrogen in the pyridine ring on the enhancement of antiproliferative activity, especially for derivatives bearing amino side chains on position 2. Thus, regioisomers 6, 7 and 9 showed noticeable enhancement of activity in comparison to their counterparts 10, 11 and 13 with IC50 values in a nanomolar range of concentration (0.3-0.9 μM). Interactions with DNA (including G-quadruplex structure) and RNA were influenced by the position of amino side chains on the tetracyclic core of imidazo[4,5-b]pyridine derivatives and the ligand charge. Moderate to high binding affinities (logKs = 5-7) obtained for selected imidazo[4,5-b]pyridine derivatives suggest that DNA/RNA are potential cell targets.
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Affiliation(s)
- Borka Lončar
- Pliva d.o.o., odjel TAPI I&R, Unapređenje tehnoloških procesa i Podrška proizvodnji, Croatia
| | - Nataša Perin
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10000, Zagreb, Croatia
| | - Marija Mioč
- Division of Molecular Medicine, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000, Zagreb, Croatia
| | - Ida Boček
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10000, Zagreb, Croatia
| | - Lea Grgić
- Ruđer Bošković Institute, Division of Organic Chemistry and Biochemistry, Bijenička cesta 54, 10 000, Zagreb, Croatia
| | - Marijeta Kralj
- Division of Molecular Medicine, Ruđer Bošković Institute, Bijenička cesta 54, HR-10000, Zagreb, Croatia
| | - Sanja Tomić
- Ruđer Bošković Institute, Division of Organic Chemistry and Biochemistry, Bijenička cesta 54, 10 000, Zagreb, Croatia
| | - Marijana Radić Stojković
- Ruđer Bošković Institute, Division of Organic Chemistry and Biochemistry, Bijenička cesta 54, 10 000, Zagreb, Croatia.
| | - Marijana Hranjec
- Department of Organic Chemistry, Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, HR-10000, Zagreb, Croatia.
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6
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Doganc F, Alp M, Karabay A, Koç A, Eren G, Göker H. Synthesis and Cytotoxicity of Some Imidazo[4,5‐
b
]pyridine Derivatives and Their Regioselective
N
‐Alkylation. ChemistrySelect 2021. [DOI: 10.1002/slct.202004584] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Fatima Doganc
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy Ankara University 06100 Tandogan, Ankara Turkey
| | - Mehmet Alp
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy Ankara University 06100 Tandogan, Ankara Turkey
| | - Arzu Karabay
- Department of Biochemistry, Faculty of Pharmacy Ankara University 06100 Tandogan, Ankara Turkey
| | - Aslı Koç
- Department of Biochemistry, Faculty of Pharmacy Ankara University 06100 Tandogan, Ankara Turkey
| | - Gokcen Eren
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy Gazi University 06330 Etiler, Ankara Turkey
| | - Hakan Göker
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy Ankara University 06100 Tandogan, Ankara Turkey
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7
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Wilhelmsen CA, Dixon ADC, Chisholm JD, Clark DA. Synthesis of N-Substituted 3-Amino-4-halopyridines: A Sequential Boc-Removal/Reductive Amination Mediated by Brønsted and Lewis Acids. J Org Chem 2018; 83:1634-1642. [PMID: 29308898 DOI: 10.1021/acs.joc.7b02966] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
N-Substituted 3-amino-4-halopyridines are valuable synthetic intermediates, as they readily provide access to imidazopyridines and similar heterocyclic systems. The direct synthesis of N-substituted 3-amino-4-halopyridines is problematic, as reductive aminations and base-promoted alkylations are difficult in these systems. A high yielding deprotection/alkylation protocol mediated by trifluoroacetic acid and trimethylsilyl trifluoromethanesulfonate is described, providing access to a wide scope of N-substituted 3-amino-4-halopyridines. This protocol furnishes many reaction products in high purity without chromatography. Similar reductive amination conditions were also established for deactivated anilines.
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Affiliation(s)
- Christopher A Wilhelmsen
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University , Syracuse, New York 13244, United States
| | - Alexandre D C Dixon
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University , Syracuse, New York 13244, United States
| | - John D Chisholm
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University , Syracuse, New York 13244, United States
| | - Daniel A Clark
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University , Syracuse, New York 13244, United States
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8
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Yang D, Jia M, Song X, Zhang Q. Elaborating the excited state behavior of 2-(4′-N,N-dimethylaminophenyl)-imidazo[4,5-c]pyridine coupling with methanol solvent. J PHYS ORG CHEM 2017. [DOI: 10.1002/poc.3781] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Dapeng Yang
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou China
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics; Chinese Academy of Sciences; Dalian China
| | - Min Jia
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou China
| | - Xiaoyan Song
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou China
| | - Qiaoli Zhang
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou China
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9
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Nisha, Bhargava G, Kumar Y. Copper(I)-Catalyzed Regioselective C-H Amination of N
-Pyridyl Imines Using Azidotrimethylsilane and TBHP: A One-Pot, Domino Approach to Substituted Imidazo[4, 5-b]pyridines. ChemistrySelect 2017. [DOI: 10.1002/slct.201700969] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Nisha
- Department of Chemistry; Faculty of Physical Sciences; SGT University; Gurugram Haryana-122505 India
| | - Gaurav Bhargava
- Department of Chemical Sciences; IKG Punjab Technical University; Kapurthala Punjab-144603 India
| | - Yogesh Kumar
- Department of Chemical Sciences; IKG Punjab Technical University; Kapurthala Punjab-144603 India
- Sphaerapharma Pvt. Ltd.; Manesar, Haryana India-122051 India
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10
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Valencia-Galicia NA, Corona-Sánchez R, Ballinas-Indili R, Toscano RA, Macías-Rubalcava ML, Álvarez-Toledano C. Synthesis of novel N , N ′- bis (triflyl)-1,7-dihydroimidazo[4,5- b ]pyridines and their δ-bromolactone derivatives as antifungal agents. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.07.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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11
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Behera SK, Krishnamoorthy G. Perturbation of cationic equilibrium by cucurbit-7-uril. Phys Chem Chem Phys 2017; 19:19234-19242. [PMID: 28702607 DOI: 10.1039/c7cp03583g] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The effect of cucurbit-7-uril (CB-7) on a cationic mixture with same charge has been investigated by studying monocationic mixtures of 2-(4'-N,N-dimethylaminophenyl)imidazo[4,5-b]pyridine (DMAPIP-b) and 2-(4'-N,N-dimethylaminophenyl)imidazo[4,5-c]pyridine (DMAPIP-c). The pKa of both the guests increases in CB-7. DMAPIP-b forms all three monocations in the ground and the excited states in aqueous as well as in CB-7 solution. However, CB-7 shifts the equilibrium more towards the less polar MC2 and MC3. On the other hand, DMAPIP-c exists only as MC1 and MC3 in aqueous solution, however, in CB-7 it exists not only as MC1 and MC3 but also as MC2 in CB-7 in the ground state. In the excited state, as in aqueous solution MC1 forms MC2 by biprotonic phototautomerism in CB-7. The association constants of monocations suggest a pyridyl nitrogen position dependence. All the MC-CB-7 complexes are optimized by density functional theory (DFT).
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Affiliation(s)
- Santosh Kumar Behera
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahti-781039, India.
| | - G Krishnamoorthy
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahti-781039, India.
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12
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Krause M, Foks H, Gobis K. Pharmacological Potential and Synthetic Approaches of Imidazo[4,5-b]pyridine and Imidazo[4,5-c]pyridine Derivatives. Molecules 2017; 22:molecules22030399. [PMID: 28273868 PMCID: PMC6155225 DOI: 10.3390/molecules22030399] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2017] [Accepted: 03/02/2017] [Indexed: 12/23/2022] Open
Abstract
The structural resemblance between the fused imidazopyridine heterocyclic ring system and purines has prompted biological investigations to assess their potential therapeutic significance. They are known to play a crucial role in numerous disease conditions. The discovery of their first bioactivity as GABAA receptor positive allosteric modulators divulged their medicinal potential. Proton pump inhibitors, aromatase inhibitors, and NSAIDs were also found in this chemical group. Imidazopyridines have the ability to influence many cellular pathways necessary for the proper functioning of cancerous cells, pathogens, components of the immune system, enzymes involved in carbohydrate metabolism, etc. The collective results of biochemical and biophysical properties foregrounded their medicinal significance in central nervous system, digestive system, cancer, inflammation, etc. In recent years, new preparative methods for the synthesis of imidazopyridines using various catalysts have been described. The present manuscript to the best of our knowledge is the complete compilation on the synthesis and medicinal aspects of imidazo[4,5-b]pyridines and imidazo[4,5-c]pyridines reported from the year 2000 to date, including structure–activity relationships.
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Affiliation(s)
- Malwina Krause
- Department of Organic Chemistry, Medical University of Gdańsk, 107 Gen. Hallera Ave., 80-416 Gdańsk, Poland.
| | - Henryk Foks
- Department of Organic Chemistry, Medical University of Gdańsk, 107 Gen. Hallera Ave., 80-416 Gdańsk, Poland.
| | - Katarzyna Gobis
- Department of Organic Chemistry, Medical University of Gdańsk, 107 Gen. Hallera Ave., 80-416 Gdańsk, Poland.
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13
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Yang D, Zhao J, Jia M, Song X. A theoretical study about the excited state intermolecular proton transfer mechanisms for 2-phenylimidazo[4,5-b]pyridine in methanol solvent. RSC Adv 2017. [DOI: 10.1039/c7ra05976k] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Within the framework of DFT and TDDFT methods, we have investigated the novel system 2-phenylimidazo[4,5-b]pyridine (PIP) with respect to the dynamical behavior of its excited state in methanol (MeOH) solvents.
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Affiliation(s)
- Dapeng Yang
- College of Mathematics and Information Science
- North China University of Water Resources and Electric Power
- Zhengzhou 450046
- China
- State Key Laboratory of Molecular Reaction Dynamics
| | - Jinfeng Zhao
- State Key Laboratory of Molecular Reaction Dynamics
- Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
| | - Min Jia
- College of Mathematics and Information Science
- North China University of Water Resources and Electric Power
- Zhengzhou 450046
- China
| | - Xiaoyan Song
- College of Mathematics and Information Science
- North China University of Water Resources and Electric Power
- Zhengzhou 450046
- China
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14
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Experimental and computational study of the structure and spectroscopic properties of 1′,3′-Dihydrospiro[cyclohexane-1,2′-[2 H ]imidazo[4,5- b ]pyridine]. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.07.065] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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15
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A Simple Precursor for Highly Functionalized Fused Imidazo[4,5-b]pyridines and Imidazo[4,5-b]-1,8-naphthyridine. Molecules 2016; 21:molecules21121646. [PMID: 27916964 PMCID: PMC6273580 DOI: 10.3390/molecules21121646] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Revised: 11/21/2016] [Accepted: 11/23/2016] [Indexed: 12/02/2022] Open
Abstract
1-alkyl aryl-5-amino-4-(cyanoformimidoyl)imidazoles 4 were reacted with malononitrile and 2-amino-1,1,3-propenetricarbonitrile under mild experimental conditions, which led to 5-amino-3-(substituted benzyl)-6,7-dicyano-3H-imidazo[4,5-b]pyridines 5 and 6,8-diamino-3-(4-substituted benzyl)-3H-imidazo[4,5-b]-1,8-naphthyridine-7,9-dicarbonitrile 6, respectively, when the reaction was carried out in the absence of a base, or to 5,7-diamino-3-(4-alkyl aryl)-3H-imidazo[4,5-b]pyridine-6-carbonitrile 8, and 6,8,9-triamino-3-(4-substitutedbenzyl)-3H-imidazo[4,5-b]-1,8-naphthyridine-7-carbonitrile 10 in the presence of 1,8-diazabicyclo(5.4.0)undec-7-ene (DBU). Both reactions evolved from an adduct formed by nucleophilic attack of the malononitrile anion or 2-amino-1,1,3-propenetricarbonitrile anion to the carbon of the cyanoformimidoyl substituent. In the case of the malononitrile anion, a 5-amino-1-alkyl aryl-4-(1-amino-2,2-dicyanovinyl)imidazole 7 was isolated when this reaction was carried out in the presence of DBU. The structure of compound 7 was confirmed by spectroscopic methods, and cyclized intramolecularly to 8 by heating in ethanol/triethyl amine.
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16
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Baladi T, Granzhan A, Piguel S. Microwave-Assisted C-2 Direct Alkenylation of Imidazo[4,5-b]pyridines: Access to Fluorescent Purine Isosteres with Remarkably Large Stokes Shifts. European J Org Chem 2016. [DOI: 10.1002/ejoc.201600166] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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17
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Begunov RS, Shebunina TV, Buzina VA, Fakhrutdinov AN, Shashkov AS. Co-synthesis of 1-(3-aminopyridin-2-yl)-1H-benzimidazole and 3-(2-aminophenyl)-3H-imidazo[4,5-b]pyridine. Russ Chem Bull 2016. [DOI: 10.1007/s11172-016-1382-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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18
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Synthesis and potent cytotoxicity of some novel imidazopyridine derivatives against MCF-7 human breast adenocarcinoma cell line. Chem Heterocycl Compd (N Y) 2015. [DOI: 10.1007/s10593-015-1765-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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19
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Banda V, Gautham SK, Pillalamarri SR, Chavva K, Banda N. Synthesis of Novel 1,2,3-Triazole/Isoxazole-Functionalized Imidazo[4,5-b]pyridin-2(3H)-one Derivatives, Their Antimicrobial and Anticancer Activity. J Heterocycl Chem 2015. [DOI: 10.1002/jhet.2370] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Veeraswamy Banda
- Fluoroorganic Division; Indian Institute of Chemical Technology; Tarnaka Hyderabad 500007 India
| | - Santhosh Kumar Gautham
- Fluoroorganic Division; Indian Institute of Chemical Technology; Tarnaka Hyderabad 500007 India
| | | | - Kurumurthy Chavva
- Fluoroorganic Division; Indian Institute of Chemical Technology; Tarnaka Hyderabad 500007 India
| | - Narsaiah Banda
- Fluoroorganic Division; Indian Institute of Chemical Technology; Tarnaka Hyderabad 500007 India
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20
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Mishra A, Sahu S, Tripathi S, Krishnamoorthy G. Photoinduced intramolecular charge transfer in trans-2-[4'-(N,N-dimethylamino)styryl]imidazo[4,5-b]pyridine: effect of introducing a C[double bond, length as m-dash]C double bond. Photochem Photobiol Sci 2015; 13:1476-86. [PMID: 25103414 DOI: 10.1039/c4pp00237g] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
The spectral characteristics of trans-2-[4'-(N,N-dimethylamino)styryl]imidazo[4,5-b]pyridine (t-DMASIP-b) have been investigated using absorption and fluorescence techniques, and compared with 2-(4'-N,N-dimethylamino)imidazo[4,5-b]pyridine (DMAPIP-b). The study reveals that introduction of a C[double bond, length as m-dash]C double bond strongly perturbs the photophysics of the system. Unlike DMAPIP-b, t-DMASIP-b emits a single emission in aprotic and protic solvents. The emission occurs from the locally excited state in nonpolar solvents and from a planar intramolecular charge transfer (PICT) state in polar solvents. Multiple linear regression analysis suggests that among the different solvent parameters, the dipolar interaction contributes more to the stabilization of the system in both the ground and excited states. Theoretical calculations suggest that, unlike in DMAPIP-b, proton coupled twisted intramolecular charge transfer (TICT) emission does not occur in t-DMASIP-b. The higher quantum yield obtained in the viscous solvent glycerol is attributed to the restriction of the twisting of the olefinic bond. The photoirradiation of t-DMASIP-b shows that isomerization takes place in all solvents, including viscous glycerol. The theoretically simulated potential energy surface shows that isomerization occurs via a phantom state, which is a nonradiative process. The rise in temperature favors the photoisomerization, thus, the fluorescence quantum yield decreases. The prototropic study indicates that, unlike in DMAPIP-b, the protonation takes place at different places to form the monocations.
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Affiliation(s)
- Anasuya Mishra
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, India.
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21
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Mishra A, Malakar A, Biswal HT, Barman MK, Krishnamoorthy G. Interactions of a few azole derivatives with a transport protein: role of heteroatoms. J Mol Recognit 2015; 28:299-305. [DOI: 10.1002/jmr.2444] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2014] [Revised: 10/24/2014] [Accepted: 10/27/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Anasuya Mishra
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati 781039 India
| | - Ashim Malakar
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati 781039 India
| | - Himadree T. Biswal
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati 781039 India
| | - Monoj K. Barman
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati 781039 India
| | - G. Krishnamoorthy
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati 781039 India
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22
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Abstract
Introduction of novel and diverse functional groups in drug discovery is always seen with hesitancy until good activity and low toxicity characteristics are proven. The introduction of fluorine in drug-like compounds is now a well-accepted strategy in medicinal chemistry. However, polyfluoroalkyl groups, with the exception of trifluoromethyl substituents, are not well explored yet. Our aim is to show to the readers how polyfluorinated groups can be beneficial to the properties of pharmaceutically active compounds by highlighting the structure–activity relationship (SAR) studies that led to the selection of polyfluorinated moieties as key structural features. Despite the fact that the use of higher polyfluoroalkyl/aryl moieties is still in its infancy, we believe that they will soon acquire the same importance of their lower parents.
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23
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Chipem FAS, Malakar A, Krishnamoorthy G. Intramolecular Proton Transfer in 2-(2′-hydroxyphenyl)oxazolo[4,5-b]pyridine: Evidence for Tautomer in the Ground State. Photochem Photobiol 2015; 91:298-305. [DOI: 10.1111/php.12411] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2014] [Accepted: 12/14/2014] [Indexed: 01/19/2023]
Affiliation(s)
- Francis A. S. Chipem
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati India
| | - Ashim Malakar
- Department of Chemistry; Indian Institute of Technology Guwahati; Guwahati India
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24
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Sajith AM, Abdul Khader K, Joshi N, Reddy MN, Syed Ali Padusha M, Nagaswarupa H, Nibin Joy M, Bodke YD, Karuvalam RP, Banerjee R, Muralidharan A, Rajendra P. Design, synthesis and structure–activity relationship (SAR) studies of imidazo[4,5-b]pyridine derived purine isosteres and their potential as cytotoxic agents. Eur J Med Chem 2015; 89:21-31. [DOI: 10.1016/j.ejmech.2014.10.037] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2014] [Revised: 09/05/2014] [Accepted: 10/12/2014] [Indexed: 12/18/2022]
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25
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Behera SK, Krishnamoorthy G. Relay proton transfer triggered twisted intramolecular charge transfer. Photochem Photobiol Sci 2015; 14:2225-37. [DOI: 10.1039/c5pp00339c] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The mechanism for the dual emission of 2-(4′-N,N-dimethylaminophenyl)imidazo[4,5-c]pyridine (DMAPIP-c) in protic solvents was investigated by synthesizing and studying its analogues.
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Affiliation(s)
| | - G. Krishnamoorthy
- Department of Chemistry
- Indian Institute of Technology Guwahati
- Guwahati
- India
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26
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Harer SL, Bhatia MS. In-silico docking based design and synthesis of [1H,3H] imidazo[4,5-b] pyridines as lumazine synthase inhibitors for their effective antimicrobial activity. JOURNAL OF PHARMACY AND BIOALLIED SCIENCES 2014; 6:285-96. [PMID: 25400412 PMCID: PMC4231389 DOI: 10.4103/0975-7406.142962] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2013] [Revised: 03/22/2014] [Accepted: 05/23/2014] [Indexed: 11/04/2022] Open
Abstract
PURPOSE The imidazopyridine moiety is important pharmacophore that has proven to be useful for a number of biologically relevant targets, also reported to display antibacterial, antifungal, antiviral properties. Riboflavin biosynthesis involving catalytic step of Lumazine synthase is absent in animals and human, but present in microorganism, one of marked advantage of this study. Still, this path is not exploited as antiinfective target. Here, we proposed different interactions between [1H,3H] imidazo[4,5-b] pyridine test ligands and target protein Lumazine synthase (protein Data Bank 2C92), one-step synthesis of title compounds and further evaluation of them for in vitro antimicrobial activity. MATERIALS AND METHODS Active pocket of the target protein involved in the interaction with the test ligands molecules was found using Biopredicta tools in VLifeMDS 4.3 Suite. In-silico docking suggests H-bonding, hydrophobic interaction, charge interaction, aromatic interaction, and Vanderwaal forces responsible for stabilizing enzyme-inhibitor complex. Disc diffusion assay method was used for in vitro antimicrobial screening. RESULTS AND DISCUSSION Investigation of possible interaction between test ligands and target lumazine synthase of Mycobacterium tuberculosis suggested 1i and 2f as best fit candidates showing hydrogen bonding, hydrophobic, aromatic and Vanderwaal's forces. Among all derivatives 1g, 1j, 1k, 1l, 2a, 2c, 2d, 2e, 2h, and 2j exhibited potent activities against bacteria and fungi compared to the standard Ciprofloxacin and Fluconazole, respectively. The superiority of 1H imidazo [4,5-b] pyridine compounds having R' = Cl >No2 > NH2 at the phenyl/aliphatic moiety resident on the imidazopyridine, whereas leading 3H imidazo[4,5-b] pyridine compounds containing R/Ar = Cl > No2 > NH2> OCH3 substituents on the 2(nd) position of imidazole.
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Affiliation(s)
- Sunil L Harer
- Department of Pharmaceutical Chemistry, Bharati Vidyapeeth College of Pharmacy, Kolhapur, Maharashtra, India
| | - Manish S Bhatia
- Department of Pharmaceutical Chemistry, Bharati Vidyapeeth College of Pharmacy, Kolhapur, Maharashtra, India
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27
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Morshed MN. Identification of Aurora-A Inhibitors by Ligand and Structure-Based Virtual Screening. Mol Inform 2014; 33:369-81. [PMID: 27485892 DOI: 10.1002/minf.201300168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2013] [Accepted: 03/28/2014] [Indexed: 11/11/2022]
Abstract
Aurora kinase A has been identified as one of the most attractive targets for cancer therapy because of its critical role in the regulation of the cell cycle. In order to identify active compounds with structural diversity we performed virtual screening. 3D-QSAR pharmacophore models were developed and the best model was used as a query for screening the databases. Ligand and structure-based virtual screening protocol was conducted sequentially by applying the common feature pharmacophore and molecular docking to discover potent Aurora-A inhibitors. A total of eighty-eight compounds were selected for the in vitro activities against various human cancer cell lines (DU145 and HT29). Considering the activity data, we have identified seven compounds to be considered for the next step, among which four compounds had high inhibition rate (above 50 %) at 10 µM with GI50 lower than 10 µM. Based on the cell line and enzyme assay (Aurora-A & B) result, these four compounds were used as template/query molecule for similarity search. The best result was obtained for similarity hit SH3. It had IC50 of 0.578 and 11.77 µM for Aurora-A and B respectively, which implies 20-fold selectivity over Aurora-B. The hits obtained from this screening scheme could be potential drug candidates after further optimization.
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Affiliation(s)
- Mohammad Neaz Morshed
- Center for Advanced Research in Sciences (CARS), University of Dhaka, Dhaka-1000, Bangladesh. , .,Neuro-Medicine Center, Life Sciences Division, Korea Institute of Science and Technology, PO Box 131, Cheongryang, Seoul 130-650, Republic of Korea. , .,School of Science, University of Science and Technology, 52 Eoeun dong,Yuseong-gu, Daejeon 305-333, Republic of Korea tel.: +880-2-9661920-73/4634; fax: +880-2-8615583. ,
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28
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Devaru VB, Vinduvahini M, Madaiah M, Revanasiddappa HD, Devarajegowda HC. 1-(6-Chloro-1-methyl-1H-imidazo[4,5-c]pyridin-4-yl)-3-(2-chloro-phen-yl)urea. Acta Crystallogr Sect E Struct Rep Online 2014; 70:o155-6. [PMID: 24764877 PMCID: PMC3998316 DOI: 10.1107/s1600536814000695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2014] [Accepted: 01/11/2014] [Indexed: 11/21/2022]
Abstract
In the title compound, C14H11Cl2N5O, the plane of the 1H-imidazo[4,5-c]pyridine ring system [r.m.s. deviation = 0.087 (19) Å] makes a dihedral angle of 4.87 (10)° with the terminal phenyl ring. An intra-molecular N-H⋯N hydrogen bond stabilizes the mol-ecular conformation. In the crystal, N-H⋯O hydrogen bonds link the mol-ecules into inversion dimers. These dimers are connected by π-π inter-actions between imidazole rings [shortest centroid-centroid distance = 3.4443 (14) Å].
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Affiliation(s)
| | - M. Vinduvahini
- Department of Physics, Sri D Devaraja Urs Govt. First Grade College, Hunsur 571 105, Mysore District, Karnataka, India
| | - M. Madaiah
- Department of Studies in Chemistry, Manasagangotri, University of Mysore, Mysore 570 006, Karnataka, India
| | - H. D. Revanasiddappa
- Department of Studies in Chemistry, Manasagangotri, University of Mysore, Mysore 570 006, Karnataka, India
| | - H. C. Devarajegowda
- Department of Physics, Yuvaraja’s College (Constituent College), University of Mysore, Mysore 570 005, Karnataka, India
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29
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Johannes JW, Chuaqui C, Cowen S, Devereaux E, Gingipalli L, Molina A, Wang T, Whitston D, Wu X, Zhang HJ, Zinda M. Discovery of 6-aryl-azabenzimidaoles that inhibit the TBK1/IKK-ε kinases. Bioorg Med Chem Lett 2014; 24:1138-43. [DOI: 10.1016/j.bmcl.2013.12.123] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Revised: 12/29/2013] [Accepted: 12/31/2013] [Indexed: 10/25/2022]
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30
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Bavetsias V, Faisal A, Crumpler S, Brown N, Kosmopoulou M, Joshi A, Atrash B, Pérez-Fuertes Y, Schmitt JA, Boxall KJ, Burke R, Sun C, Avery S, Bush K, Henley A, Raynaud FI, Workman P, Bayliss R, Linardopoulos S, Blagg J. Aurora isoform selectivity: design and synthesis of imidazo[4,5-b]pyridine derivatives as highly selective inhibitors of Aurora-A kinase in cells. J Med Chem 2013; 56:9122-35. [PMID: 24195668 PMCID: PMC3848336 DOI: 10.1021/jm401115g] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2013] [Indexed: 12/12/2022]
Abstract
Aurora-A differs from Aurora-B/C at three positions in the ATP-binding pocket (L215, T217, and R220). Exploiting these differences, crystal structures of ligand-Aurora protein interactions formed the basis of a design principle for imidazo[4,5-b]pyridine-derived Aurora-A-selective inhibitors. Guided by a computational modeling approach, appropriate C7-imidazo[4,5-b]pyridine derivatization led to the discovery of highly selective inhibitors, such as compound 28c, of Aurora-A over Aurora-B. In HCT116 human colon carcinoma cells, 28c and 40f inhibited the Aurora-A L215R and R220K mutants with IC50 values similar to those seen for the Aurora-A wild type. However, the Aurora-A T217E mutant was significantly less sensitive to inhibition by 28c and 40f compared to the Aurora-A wild type, suggesting that the T217 residue plays a critical role in governing the observed isoform selectivity for Aurora-A inhibition. These compounds are useful small-molecule chemical tools to further explore the function of Aurora-A in cells.
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Affiliation(s)
- Vassilios Bavetsias
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Amir Faisal
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Simon Crumpler
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Nathan Brown
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Magda Kosmopoulou
- Division
of Structural Biology, The Institute of
Cancer Research, Chester Beatty Laboratories, London SW3 6JB, United
Kingdom
| | - Amar Joshi
- Department
of Biochemistry, University of Leicester, Lancaster Road, Leicester LE1 9HN, United
Kingdom
| | - Butrus Atrash
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Yolanda Pérez-Fuertes
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Jessica A. Schmitt
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Katherine J. Boxall
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Rosemary Burke
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Chongbo Sun
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Sian Avery
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Katherine Bush
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Alan Henley
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Florence I. Raynaud
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Paul Workman
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
| | - Richard Bayliss
- Division
of Structural Biology, The Institute of
Cancer Research, Chester Beatty Laboratories, London SW3 6JB, United
Kingdom
- Department
of Biochemistry, University of Leicester, Lancaster Road, Leicester LE1 9HN, United
Kingdom
| | - Spiros Linardopoulos
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
- The
Breakthrough Breast Cancer Research Centre, Division of Breast Cancer
Research, The Institute of Cancer Research, London SW3 6JB, United Kingdom
| | - Julian Blagg
- Cancer
Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, London SM2 5NG, United Kingdom
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31
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Mishra A, Sahu S, Dash N, Behera SK, Krishnamoorthy G. Double Proton Transfer Induced Twisted Intramolecular Charge Transfer Emission in 2-(4′-N,N-Dimethylaminophenyl)imidazo[4,5-b]pyridine. J Phys Chem B 2013; 117:9469-77. [PMID: 23862642 DOI: 10.1021/jp404472b] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Anasuya Mishra
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
| | - Saugata Sahu
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
| | - Nihar Dash
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
| | - Santosh Kumar Behera
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
| | - G. Krishnamoorthy
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, Assam, India
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32
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Kandri Rodi Y, Haoudi A, Capet F, Mazzah A, Essassi EM, El Ammari L. 3-Benzyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one. Acta Crystallogr Sect E Struct Rep Online 2013; 69:o962. [PMID: 23795120 PMCID: PMC3685101 DOI: 10.1107/s1600536813013780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Accepted: 05/18/2013] [Indexed: 11/16/2022]
Abstract
The fused imidazole and pyridine rings in the title compound, C13H10BrN3O, are linked to a benzyl group. The fused ring system is essentially planar, the largest deviation from the mean plane being 0.006 (2) Å. The phenyl ring is not coplanar with the fused ring system, as indicated by the dihedral angle of 67.04 (12)°. In the crystal, molecules are linked by pairs of N—H⋯O hydrogen bonds, forming inversion dimers.
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Affiliation(s)
- Youssef Kandri Rodi
- Laboratoire de Chimie Organique Appliquée, Université Sidi Mohamed Ben Abdallah, Faculté des Sciences et Techniques, Route d'Immouzzer, BP 2202 Fès, Morocco
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33
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Macdonald J, Oldfield V, Bavetsias V, Blagg J. Regioselective C2-arylation of imidazo[4,5-b]pyridines. Org Biomol Chem 2013; 11:2335-47. [PMID: 23429655 DOI: 10.1039/c3ob27477b] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We show that N3-MEM-protected imidazo[4,5-b]pyridines undergo efficient C2-functionalisation via direct C-H arylation. Twenty-two substituted imidazo[4,5-b]pyridines are prepared and iterative, selective elaboration of functionalised imidazo[4,5-b]pyridines gives 2,7- and 2,6-disubstituted derivatives in good yields from common intermediates. Mechanistic observations are consistent with a concerted-metallation-deprotonation mechanism facilitated by coordination of copper(I)iodide to the imidazo[4,5-b]pyridine.
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Affiliation(s)
- Jonathan Macdonald
- Cancer Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, Haddow Laboratories, Sutton, Surrey SM2 5NG, UK
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34
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Dash N, Mishra A, Krishnamoorthy G. Alkyl chain dependent interactions of ligands with bovine serum albumin. J Pharm Biomed Anal 2013; 77:55-62. [DOI: 10.1016/j.jpba.2013.01.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2012] [Revised: 12/16/2012] [Accepted: 01/01/2013] [Indexed: 10/27/2022]
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35
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Iaroshenko VO, Vilches-Herrera M, Gevorgyan A, Mkrtchyan S, Arakelyan K, Ostrovskyi D, Abbasi MS, Supe L, Hakobyan A, Villinger A, Volochnyuk DM, Tolmachev A. Design, synthesis and transformation of some heteroannulated 3-aminopyridines—purine isosteres with exocyclic nitrogen atom. Tetrahedron 2013. [DOI: 10.1016/j.tet.2012.11.026] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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36
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37
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Bavetsias V, Crumpler S, Sun C, Avery S, Atrash B, Faisal A, Moore AS, Kosmopoulou M, Brown N, Sheldrake PW, Bush K, Henley A, Box G, Valenti M, de Haven Brandon A, Raynaud FI, Workman P, Eccles SA, Bayliss R, Linardopoulos S, Blagg J. Optimization of imidazo[4,5-b]pyridine-based kinase inhibitors: identification of a dual FLT3/Aurora kinase inhibitor as an orally bioavailable preclinical development candidate for the treatment of acute myeloid leukemia. J Med Chem 2012; 55:8721-34. [PMID: 23043539 PMCID: PMC3483018 DOI: 10.1021/jm300952s] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
![]()
Optimization of the imidazo[4,5-b]pyridine-based
series of Aurora kinase inhibitors led to the identification of 6-chloro-7-(4-(4-chlorobenzyl)piperazin-1-yl)-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridine (27e), a potent inhibitor of Aurora
kinases (Aurora-A Kd = 7.5 nM, Aurora-B Kd = 48 nM), FLT3 kinase (Kd = 6.2 nM), and FLT3 mutants including FLT3-ITD (Kd = 38 nM) and FLT3(D835Y) (Kd = 14 nM). FLT3-ITD causes constitutive FLT3 kinase
activation and is detected in 20–35% of adults and 15% of children
with acute myeloid leukemia (AML), conferring a poor prognosis in
both age groups. In an in vivo setting, 27e strongly
inhibited the growth of a FLT3-ITD-positive AML human
tumor xenograft (MV4–11) following oral administration, with
in vivo biomarker modulation and plasma free drug exposures consistent
with dual FLT3 and Aurora kinase inhibition. Compound 27e, an orally bioavailable dual FLT3 and Aurora kinase inhibitor, was
selected as a preclinical development candidate for the treatment
of human malignancies, in particular AML, in adults and children.
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Affiliation(s)
- Vassilios Bavetsias
- Cancer Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, 15 Cotswold Road, Sutton, Surrey SM2 5NG, United Kingdom
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38
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Dash N, Krishnamoorthy G. Effect of temperature on the spectral characteristics of 2-(4'-N,N-dimethylaminophenyl)imidazo[4,5-b]pyridine. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 95:540-546. [PMID: 22595251 DOI: 10.1016/j.saa.2012.04.046] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2011] [Revised: 03/25/2012] [Accepted: 04/08/2012] [Indexed: 05/31/2023]
Abstract
The photophysical behaviors of 2-(4'-N,N-dimethylaminophenyl)imidazo[4,5-b]pyridine (DMAPIP-b) were studied as a function of temperature in six different solvents (cyclohexane, acetonitrile, ethanol, methanol, 1-proponal and glycerol), using absorption, steady-state emission and time-resolved fluorescence techniques. The temperature strongly affects the fluorescence quantum yields and life times of both TICT and normal emissions of DMAPIP-b. Density functional theory (DFT) calculations have been performed on all two isomers of DMAPIP-b. Solvent stabilization effects have also been studied based on integral equation formalism-polarizable continuum (IEF-PCM) model in four different solvents, cyclohexane, acetonitrile, ethanol and methanol. The calculations suggested that isomer I is more stable than isomer II of all these solvents. Both solvatochromic and thermochromic methods were used to calculate the dipole moment of the TICT state and the values obtained by both methods are in good agreement with each other.
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Affiliation(s)
- Nihar Dash
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, India
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39
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Cheng C, Liu ZG, Zhang H, Xie JD, Chen XG, Zhao XQ, Wang F, Liang YJ, Chen LK, Singh S, Chen JJ, Talele TT, Chen ZS, Zhong FT, Fu LW. Enhancing chemosensitivity in ABCB1- and ABCG2-overexpressing cells and cancer stem-like cells by an Aurora kinase inhibitor CCT129202. Mol Pharm 2012; 9:1971-82. [PMID: 22632055 DOI: 10.1021/mp2006714] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Imidazopyridine CCT129202 is an inhibitor of Aurora kinase activity and displays a favorable antineoplastic effect in preclinical studies. Here, we investigated the enhanced effect of CCT129202 on the cytotoxicity of chemotherapeutic drugs in multidrug resistant (MDR) cells with overexpression of ATP-binding cassette (ABC) transporters and cancer stem-like cells. CCT129202 of more than 90% cell survival concentration significantly enhanced the cytotoxicity of substrate drugs and increased the intracellular accumulations of doxorubicin and rhodamine 123 in ABCB1 and ABCG2 overexpressing cells, while no effect was found on parental sensitive cells. Interestingly, CCT129202 also potentiated the sensitivity of cancer stem-like cells to doxorubicin. Importantly, CCT129202 increased the inhibitory effect of vincristine and paclitaxel on ABCB1 overexpressing KBv200 cell xenografts in nude mice and human esophageal cancer tissue overexpressing ABCB1 ex vivo, respectively. Furthermore, the ATPase activity of ABCB1 was inhibited by CCT129202. Homology modeling predicted the binding conformation of CCT129202 within the large hydrophobic cavity of ABCB1. On the other hand, CCT129202 neither apparently altered the expression levels of ABCB1 and ABCG2 nor inhibited the activity of Aurora kinases in MDR cells under the concentration of reversal MDR. In conclusion, CCT129202 significantly reversed ABCB1- and ABCG2-mediated MDR in vitro, in vivo and ex vivo by inhibiting the function of their transporters and enhanced the eradication of cancer stem-like cells by chemotherapeutic agents. CCT129202 may be a candidate as MDR reversal agent for antineoplastic combination therapy and merits further clinical investigation.
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Affiliation(s)
- Chao Cheng
- Department of Thoracic Surgery, The First Affiliated Hospital of Sun Yat-Sen University, Guangzhou 510080, China
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40
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Rosenberg AJ, Zhao J, Clark DA. Synthesis of Imidazo[4,5-b]pyridines and Imidazo[4,5-b]pyrazines by Palladium Catalyzed Amidation of 2-Chloro-3-amino-heterocycles. Org Lett 2012; 14:1764-7. [DOI: 10.1021/ol300359s] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Adam J. Rosenberg
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University, Syracuse, New York 13244, United States
| | - Jinbo Zhao
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University, Syracuse, New York 13244, United States
| | - Daniel A. Clark
- Department of Chemistry, 1-014 Center for Science and Technology, Syracuse University, Syracuse, New York 13244, United States
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41
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Discovery of azabenzimidazole derivatives as potent, selective inhibitors of TBK1/IKKε kinases. Bioorg Med Chem Lett 2012; 22:2063-9. [DOI: 10.1016/j.bmcl.2012.01.018] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2011] [Revised: 01/03/2012] [Accepted: 01/09/2012] [Indexed: 11/23/2022]
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42
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Moore AS, Faisal A, Gonzalez de Castro D, Bavetsias V, Sun C, Atrash B, Valenti M, de Haven Brandon A, Avery S, Mair D, Mirabella F, Swansbury J, Pearson ADJ, Workman P, Blagg J, Raynaud FI, Eccles SA, Linardopoulos S. Selective FLT3 inhibition of FLT3-ITD+ acute myeloid leukaemia resulting in secondary D835Y mutation: a model for emerging clinical resistance patterns. Leukemia 2012; 26:1462-70. [PMID: 22354205 PMCID: PMC3523391 DOI: 10.1038/leu.2012.52] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Acquired resistance to selective FLT3 inhibitors, is an emerging clinical problem in the treatment of FLT3-ITD+ acute myeloid leukaemia (AML). The paucity of valid pre-clinical models has limited investigations to determine the mechanism of acquired therapeutic resistance, thereby limiting the development of effective treatments. We generated selective FLT3 inhibitor-resistant cells by treating the FLT3-ITD+ human AML cell line MOLM-13 in vitro with the FLT3-selective inhibitor MLN518, and validated the resistant phenotype in vivo and in vitro. The resistant cells, MOLM-13-RES, harboured a new D835Y tyrosine kinase domain (TKD) mutation on the FLT3-ITD+ allele. Acquired TKD mutations, including D835Y, have recently been identified in FLT3-ITD+ patients relapsing after treatment with the novel FLT3 inhibitor, AC220. Consistent with this clinical pattern of resistance, MOLM-13- RES cells displayed high relative resistance to AC220 and Sorafenib. Furthermore, treatment of MOLM-13-RES cells with AC220 lead to loss of the FLT3 wild type allele and duplication of the FLT3-ITD-D835Y allele. Our FLT3-Aurora kinase inhibitor, CCT137690, successfully inhibited growth of FLT3-ITD-D835Y cells in vitro and in vivo, suggesting that dual FLT3-Aurora inhibition may overcome selective FLT3 inhibitor resistance, in part due to inhibition of Aurora kinase, and may benefit patients with FLT3-mutated AML.
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Affiliation(s)
- A S Moore
- Cancer Research UK Cancer Therapeutics Unit, Division of Cancer Therapeutics, The Institute of Cancer Research, Sutton, UK
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Sajith AM, Muralidharan A. Microwave enhanced Suzuki coupling: a diversity-oriented approach to the synthesis of highly functionalised 3-substituted-2-aryl/heteroaryl imidazo[4,5-b]pyridines. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2011.12.051] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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44
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Learn KS, Wagner JC, Albom MS, Angeles TS, Huang Z, Ghose AK, Wan W, Cheng M, Dorsey BD, Ott GR. Design of 7-amino-6-chloro-3H-imidazo[4,5-b]pyridine scaffold from 5-chloro-2,4-diaminopyrimidine pharmacophore: identification of potent inhibitors of anaplastic lymphoma kinase. MEDCHEMCOMM 2012. [DOI: 10.1039/c2md20061a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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45
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Mishra A, Krishnamoorthy G. Photophysical study of 2-(4′-N,N-dimethylaminophenyl)oxazolo[4,5-b]pyridine in different solvents and at various pH. Photochem Photobiol Sci 2012; 11:1356-67. [DOI: 10.1039/c2pp25039j] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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46
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47
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Dahmani S, Kandri Rodi Y, Luis SV, Bolte M, El Ammari L. 3-Allyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one. Acta Crystallogr Sect E Struct Rep Online 2011; 67:o1998. [PMID: 22091032 PMCID: PMC3213453 DOI: 10.1107/s1600536811025037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2011] [Accepted: 06/25/2011] [Indexed: 11/14/2022]
Abstract
In the molecule of the title compound, C9H8BrN3O, the fused-ring system is almost planar, the largest deviation from the mean plane being 0.008 (3) Å. The plane through the atoms forming the allyl group is roughly perpendicular to the imidazo[4,5-b]pyridin-2-one system, as indicated by the dihedral angle between them of 70.28 (11)°. In the crystal, each molecule is linked to its symmetry equivalent about the center of inversion by a pair of strong N—H⋯O hydrogen bond, forming inversion dimers.
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48
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Dahmani S, Kandri Rodi Y, Luis SV, Bolte M, El Ammari L. 1,3-Diallyl-6-bromo-1H-imidazo[4,5-b]pyridin-2(3H)-one. Acta Crystallogr Sect E Struct Rep Online 2011; 67:o1986. [PMID: 22091021 PMCID: PMC3213442 DOI: 10.1107/s1600536811026869] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2011] [Accepted: 07/05/2011] [Indexed: 11/10/2022]
Abstract
In the mol-ecule of the title compound, C(12)H(12)BrN(3)O, the fused-ring system is essentially planar, the largest deviation from the mean plane being 0.0148 (3) Å. The two allyl groups are nearly perpendicular to the imidazo[4,5-b]pyridine plane [C-C-N-C torsion angles of 81.6 (4) and -77.2 (4)°] and point in the same direction. The planes through the atoms forming each allyl group are nearly perpendicular to the imidazo[4,5-b]pyridin-2-one system, as indicated by the dihedral angles between them of 80.8 (5) and 73.6 (5)°.
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Affiliation(s)
- Siham Dahmani
- Laboratoire de Chimie Organique Appliquée, Université Sidi Mohamed, Ben Abdallah, Faculté des Sciences et Techniques, Route d’Immouzzer, BP 2202 Fès, Morocco
| | - Youssef Kandri Rodi
- Laboratoire de Chimie Organique Appliquée, Université Sidi Mohamed, Ben Abdallah, Faculté des Sciences et Techniques, Route d’Immouzzer, BP 2202 Fès, Morocco
| | - Santiago V. Luis
- Departamento de Quimica Inorganica & Organica, ESTCE, Universitat Jaume I, E-12080 Castellon, Spain
| | - Michael Bolte
- Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany
| | - Lahcen El Ammari
- Laboratoire de Chimie du Solide Appliquée, Faculté des Sciences, Université Mohammed V-Agdal, Avenue Ibn Battouta, BP 1014, Rabat, Morocco
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49
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Ouzidan Y, Essassi EM, Luis SV, Bolte M, El Ammari L. 6-Bromo-3-methyl-2-phenyl-3H-imidazo[4,5-b]pyridine. Acta Crystallogr Sect E Struct Rep Online 2011; 67:o1684. [PMID: 21837081 PMCID: PMC3151993 DOI: 10.1107/s1600536811022318] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2011] [Accepted: 06/08/2011] [Indexed: 05/26/2023]
Abstract
The two fused five- and six-membered rings building the molecule of the title compound, C13H10BrN3, are approximately planar, the largest deviation from the mean plane being 0.004 (2) Å. The dihedral angle between the imidazo[4,5-b]pyridine mean plane and that of the phenyl ring is 41.84 (11)°. The structure is held together by slipped π–π stacking between symmetry-related molecules, with an interplanar distance of 3.583 (1) Å and a centroid–centroid vector of 3.670 (2) Å.
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50
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Novel imidazo[4,5-b]pyridine and triaza-benzo[c]fluorene derivatives: Synthesis, antiproliferative activity and DNA binding studies. Eur J Med Chem 2011; 46:2748-58. [DOI: 10.1016/j.ejmech.2011.03.062] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2011] [Revised: 03/17/2011] [Accepted: 03/30/2011] [Indexed: 11/23/2022]
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