SBDiEM: A new mathematical model of infectious disease dynamics

Application of an ARFIMA Model to Estimate Hepatitis C Epidemics in Henan, China

Hepatitis C (HC) presents a substantial burden, and a goal has been established for ending HC epidemics by 2030. This study aimed to monitor HC epidemics by designing a paradigmatic autoregressive fractionally integrated moving average (ARFIMA) for projections until 2030, and evaluating its efficacy compared with the autoregressive integrated moving average (ARIMA). Monthly HC incidence data in Henan from January 2004 to June 2023 were obtained. Two periods (January 2004 to June 2022 and January 2004 to December 2015) were treated as training sets to build both models, whereas the remaining periods served as test sets to perform performance evaluation. There were 465,196 HC cases, with an escalation in incidence (average annual percentage change = 8.64, 95% CI: 3.71-13.80) and a peak in March and a trough in February. For both the 12 and 90 holdout data forecasts, ARFIMA generated lower errors than ARIMA across various metrics: mean absolute deviation (252.93 versus 262.28 and 235.37 versus 1,689.65), mean absolute percentage error (0.17 versus 0.18 and 0.14 versus 0.87), root mean square error (350.31 versus 362.31 and 311.96 versus 1,905.71), mean error rate (0.14 versus 0.15 and 0.11 versus 0.82), and root mean square percentage error (0.26 versus 0.26 and 0.24 versus 1.01). Autoregressive fractionally integrated moving average predicted 181,650 (95% CI: 46,518-316,783) HC cases, averaging 22,706 (95% CI: 5,815-39,598) cases annually during 2023-2030. Henan faces challenges in eliminating HC epidemics, emphasizing the need for strengthened strategies. Autoregressive fractionally integrated moving average can offer evidence-based insights for public health measures.

A nonlinear mathematical model on the Covid-19 transmission pattern among diabetic and non-diabetic population

In this paper, a three tier mathematical model describing the interactions between susceptible population, Covid-19 infected, diabetic population and Covid-19 infected, non diabetic population is proposed. Basic properties of such a dynamic model, namely, non negativity, boundedness of solutions, existence of disease-free and disease equilibria are studied and sufficient conditions are obtained. Basic reproduction number for the system is derived. Sufficient conditions on functionals and parameters of the system are obtained for the local as well as global stability of equilibria, thus, establishing the conditions for eventual prevalence of disease free or disease environment, as the case may be. The stability aspects are discussed in the context of basic reproduction number and vice versa. An important contribution of this article is that a novel technique is presented to estimate some key, influencing parameters of the system so that a pre-specified, assumed equilibrium state is approached eventually. This enables the society to prepare itself with the help of these key, influencing parameters so estimated. Several examples are provided to illustrate the results established and simulations are provided to visualize the examples.

Global analysis and prediction scenario of infectious outbreaks by recurrent dynamic model and machine learning models: A case study on COVID-19

It is essential to evaluate patient outcomes at an early stage when dealing with a pandemic to provide optimal clinical care and resource management. Many methods have been proposed to provide a roadmap against different pandemics, including the recent pandemic disease COVID-19. Due to recurrent epidemic waves of COVID-19, which have been observed in many countries, mathematical modeling and forecasting of COVID-19 are still necessary as long as the world continues to battle against the pandemic. Modeling may aid in determining which interventions to try or predict future growth patterns. In this article, we design a combined approach for analyzing any pandemic in two separate parts. In the first part of the paper, we develop a recurrent SEIRS compartmental model to predict recurrent outbreak patterns of diseases. Due to its time-varying parameters, our model is able to reflect the dynamics of infectious diseases, and to measure the effectiveness of the restrictive measures. We discuss the stable solutions of the corresponding autonomous system with frozen parameters. We focus on the regime shifts and tipping points; then we investigate tipping phenomena due to parameter drifts in our time-varying parameters model that exhibits a bifurcation in the frozen-in case. Furthermore, we propose an optimal numerical design for estimating the system’s parameters. In the second part, we introduce machine learning models to strengthen the methodology of our paper in data analysis, particularly for prediction scenarios. We use MLP, RBF, LSTM, ANFIS, and GRNN for training and evaluation of COVID-19. Then, we compare the results with the recurrent dynamical system in the fitting process and prediction scenario. We also confirm results by implementing our methods on the released data on COVID-19 by WHO for Italy, Germany, Iran, and South Africa between 1/22/2020 and 7/24/2021, when people were engaged with different variants including Alpha, Beta, Gamma, and Delta. The results of this article show that the dynamic model is adequate for long-term analysis and data fitting, as well as obtaining parameters affecting the epidemic. However, it is ineffective in providing a long-term forecast. In contrast machine learning methods effectively provide disease prediction, although they do not provide analysis such as dynamic models. Finally, some metrics, including RMSE, R-Squared, and accuracy, are used to evaluate the machine learning models. These metrics confirm that ANFIS and RBF perform better than other methods in training and testing zones.

Modeling and analysis of novel COVID-19 outbreak under fractal-fractional derivative in Caputo sense with power-law: a case study of Pakistan

In this paper, a five-compartment model is used to explore the dynamics of the COVID-19 pandemic, taking the vaccination campaign into account. The present model consists of five components that lead to a system of five ordinary differential equations. In this paper, we examined the disease from the perspective of a fractal fractional derivative in the Caputo sense with a power law type kernal. The model is also fitted with real data for Pakistan between June 1, 2020, and March 8, 2021. The fundamental mathematical characteristics of the model have been investigated thoroughly. We have calculated the equilibrium points and the reproduction number for the model and obtained the feasible region for the system. The existence and stability criteria of the model have been validated using the Banach fixed point theory and the Picard successive approximation technique. Furthermore, we have conducted stability analysis for both the disease-free and endemic equilibrium states. On the basis of sensitivity analysis and the dynamics of the threshold parameter, we have estimated the effectiveness of vaccination and identified potential control strategies for the disease using the proposed model outbreaks. The stability of the concerned solution in Ulam-Hyers and Ulam-Hyers-Rassias sense is also investigated. For the proposed problem, some results regarding basic reproduction numbers and stability analysis for various parameters are represented graphically. Matlab software is used for numerical illustrations. Graphical representations are given for different fractional orders and for various parametric values.

Interaction of Virus in Cancer Patients: A Theoretical Dynamic Model

This study reports on a phase-space analysis of a mathematical model of tumor growth with the interaction between virus and immune response. In this study, a mathematical determination was attempted to demonstrate the relationship between uninfected cells, infected cells, effector immune cells, and free viruses using a dynamic model. We revealed the stability analysis of the system and the Lyapunov stability of the equilibrium points. Moreover, all endemic equilibrium point models are derived. We investigated the stability behavior and the range of attraction sets of the nonlinear systems concerning our model. Furthermore, a global stability analysis is proved either in the construction of a Lyapunov function showing the validity of the concerned disease-free equilibria or in endemic equilibria discussed by the model. Finally, a simulated solution is achieved and the relationship between cancer cells and other cells is drawn.

Research on epidemic spread model based on cold chain input

In recent years, the new type of coronary pneumonia (COVID-19) has become a highly contagious disease worldwide, posing a serious threat to the public health. This paper is based on the SEIR model of the new coronavirus pneumonia, considering the impact of cold chain input and re-positive on the spread of the virus in the COVID-19. In the process of model design, the food cold chain and re-positive are used as parameters, and its stability is analyzed and simulated. The experimental results show that taking into account the cold chain input and re-positive can effectively simulate the spread of the epidemic. The research results have important research value and practical significance for the prevention and control of the COVID-19 and the prediction of important time nodes.

A robust study of a piecewise fractional order COVID-19 mathematical model

In the current manuscript, we deal with the dynamics of a piecewise covid-19 mathematical model with quarantine class and vaccination using SEIQR epidemic model. For this, we discussed the deterministic, stochastic, and fractional forms of the proposed model for different steps. It has a great impact on the infectious disease models and especially for covid-19 because in start the deterministic model played its role but with time due to uncertainty the stochastic model takes place and with long term expansion the use of fractional derivatives are required. The stability of the model is discussed regarding the reproductive number. Using the non-standard finite difference scheme for the numerical solution of the deterministic model and illustrate the obtained results graphically. Further, environmental noises are added to the model for the description of the stochastic model. Then take out the existence and uniqueness of positive solution with extinction for infection. Finally, we utilize a new technique of piecewise differential and integral operators for approximating Caputo-Fabrizio fractional derivative operator for the purpose of constructing of the fractional-order model. Then study the dynamics of the models such as positivity and boundedness of the solutions and local stability analysis. Solved numerically fractional-order model used Newton Polynomial scheme and present the results graphically.

Mathematical COVID-19 model with vaccination: a case study in Saudi Arabia

The discovery of a new form of corona-viruses in December 2019, SARS-CoV-2, commonly named COVID-19, has reshaped the world. With health and economic issues at stake, scientists have been focusing on understanding the dynamics of the disease, in order to provide the governments with the best policies and strategies allowing them to reduce the span of the virus. The world has been waiting for the vaccine for more than one year. The World Health Organization (WHO) is advertising the vaccine as a safe and effective measure to fight off the virus. Saudi Arabia was the fourth country in the world to start to vaccinate its population. Even with the new simplified COVID-19 rules, the third dose is still mandatory. COVID-19 vaccines have raised many questions regarding in its efficiency and its role to reduce the number of infections. In this work, we try to answer these question and propose a new mathematical model with five compartments, including susceptible, vaccinated, infectious, asymptotic and recovered individuals. We provide theoretical results regarding the effective reproduction number, the stability of endemic equilibrium and disease free equilibrium. We provide numerical analysis of the model based on the Saudi case. Our developed model shows that the vaccine reduces the transmission rate and provides an explanation to the rise in the number of new infections immediately after the start of the vaccination campaign in Saudi Arabia.

An Effective Strategy and Mathematical Model to Predict the Sustainable Evolution of the Impact of the Pandemic Lockdown

There have been considerable losses in terms of human and economic resources due to the current coronavirus pandemic. This work, which contributes to the prevention and control of COVID-19, proposes a novel modified epidemiological model that predicts the epidemic's evolution over time in India. A mathematical model was proposed to analyze the spread of COVID-19 in India during the lockdowns implemented by the government of India during the first and second waves. What makes this study unique, however, is that it develops a conceptual model with time-dependent characteristics, which is peculiar to India's diverse and homogeneous societies. The results demonstrate that governmental control policies and suitable public perception of risk in terms of social distancing and public health safety measures are required to control the spread of COVID-19 in India. The results also show that India's two strict consecutive lockdowns (21 days and 19 days, respectively) successfully helped delay the spread of the disease, buying time to pump up healthcare capacities and management skills during the first wave of COVID-19 in India. In addition, the second wave's severe lockdown put a lot of pressure on the sustainability of many Indian cities. Therefore, the data show that timely implementation of government control laws combined with a high risk perception among the Indian population will help to ensure sustainability. The proposed model is an effective strategy for constructing healthy cities and sustainable societies in India, which will help prevent such a crisis in the future.

Mathematical Modeling the Time-Delay Interactions between Tumor Viruses and the Immune System with the Effects of Chemotherapy and Autoimmune Diseases

The immune system is the body’s defense against pathogens, which are complex living organisms found in many parts in the body including organs, tissues, cells, molecules, and proteins. When the immune system works properly, it can recognize and kill the abnormal cells and the infected cells. Otherwise, it can attack the body’s healthy cells even if there is no invader. Many researchers have developed immunotherapy (or cancer vaccines) and have used chemotherapy for cancer treatment that can kill fast-growing cancer cells or at least slow down tumor growth. However, chemotherapy drugs travel throughout the body and tend to kill both healthy cells and cancer cells. In this study, we consider the fact that chemotherapy can kill tumor cells and that the loss of the immune cells may at the same time stir up cancer growth. We present a dynamic time-delay tumor-immune model with the effects of chemotherapy drugs and autoimmune disease. The modeling results can be used to determine the progression of tumor cells in the human body with the effect of chemotherapy, autoimmune diseases, and time delays based on partial differential equations. It can also be used to predict when the tumor viruses’ free state can be reached as time progresses, as well as the state of the body’s healthy cells as time progresses. We also present a few numerical cases that illustrate that the model can be used to monitor the effects of chemotherapy drug treatment and the growth rate of tumor virus-infected cells and the autoimmune disease.

A new study on two different vaccinated fractional-order COVID-19 models via numerical algorithms

The main purpose of this paper is to provide new vaccinated models of COVID-19 in the sense of Caputo-Fabrizio and new generalized Caputo-type fractional derivatives. The formulation of the given models is presented including an exhaustive study of the model dynamics such as positivity, boundedness of the solutions and local stability analysis. Furthermore, the unique solution existence for the proposed fractional order models is discussed via fixed point theory. Numerical solutions are also derived by using two-steps Adams-Bashforth algorithm for Caputo-Fabrizio operator, and modified Predictor-Corrector method for generalised Caputo fractional derivative. Our analysis allow to show that the given fractional-order models exemplify the dynamics of COVID-19 much better than the classical ones. Also, the analysis on the convergence and stability for the proposed methods are performed. By this study, we see that how the vaccine availability plays an important role in the control of COVID-19 infection.

Vulnerability to COVID-19 in Pernambuco, Brazil: A geospatial evaluation supported by multiple-criteria decision aid methodology

The paper presents an innovative application to identify areas vulnerable to coronavirus disease 2019 (COVID-19) considering a combination of spatial analysis and a multi-criteria learning approach. We applied this methodology in the state of Pernambuco, Brazil identifying vulnerable areas by considering a set of determinants and risk factors for COVID-19, including demographic, economic and spatial characteristics and the number of human COVID-19 infections. Examining possible patterns over a set number of days taking the number of cases recorded, we arrived at a set of compatible decision rules to explain the relation between risk factors and COVID-19 cases. The results reveal why certain municipalities are critically vulnerable to COVID-19 highlighting locations for which knowledge can be gained about environmental factors.

Mathematical modeling of the outbreak of COVID-19

The novel coronavirus SARS-Cov-2 is a pandemic condition and poses a massive menace to health. The governments of different countries and their various prohibitory steps to restrict the virus's expanse have changed individuals' communication processes. Due to physical and financial factors, the population's density is more likely to interact and spread the virus. We establish a mathematical model to present the spread of the COVID-19 in India and worldwide. By the simulation process, we find the infected cases, infected fatality rate, and recovery rate of the COVID-19. We validate the model by the rough set method. In the method, we obtain the accuracy for the infected case is 90.19%, an infection-fatality of COVID-19 is 94%, and the recovery is 85.57%, approximately the same as the actual situation reported WHO. This paper uses the generalized simulation process to predict the outbreak of COVID-19 for different continents. It gives the way of future trends of the COVID-19 outbreak till December 2021 and casts enlightenment about learning the drifts of the outbreak worldwide.

Unveiling social distancing mechanisms via a fish-robot hybrid interaction

Pathogen transmission is a major limit of social species. Social distancing, a behavioural-based response to diseases, has been regularly reported in nature. However, the identification of distinctive stimuli associated with an infectious disease represents a challenging task for host species, whose cognitive mechanisms are still poorly understood. Herein, the social fish Paracheirodon innesi, was selected as model organism to investigate animal abilities in exploiting visual information to identify and promote social distancing towards potentially infected conspecifics. To address this, a robotic fish replica mimicking a healthy P. innesi subject, and another mimicking P. innesi with morphological and/or locomotion anomalies were developed. P. innesi individuals were attracted by the healthy fish replica, while they avoided the fish replica with morphological abnormalities, as well as the fish replica with an intact appearance, but performing locomotion anomalies (both symptoms associated with a microsporidian parasite infesting P. innesi and other fish). Furthermore, the fish replica presenting both morphology and locomotion anomalies in conjunction, triggered a significantly stronger social distancing response. This confirms the hypothesis that group living animals overgeneralize cues that can be related with a disease to minimize transmission, and highlights the important role of visual cues in infection risk contexts. This study prompts more attention on the role of behavioural-based strategies to avoid pathogen/parasite diffusion, and can be used to optimize computational approaches to model disease dynamics.

A model for social spreading of Covid-19: Cases of Mexico, Finland and Iceland

The shocking severity of the Covid-19 pandemic has woken up an unprecedented interest and accelerated effort of the scientific community to model and forecast epidemic spreading to find ways to control it regionally and between regions. Here we present a model that in addition to describing the dynamics of epidemic spreading with the traditional compartmental approach takes into account the social behaviour of the population distributed over a geographical region. The region to be modelled is defined as a two-dimensional grid of cells, in which each cell is weighted with the population density. In each cell a compartmental SEIRS system of delay difference equations is used to simulate the local dynamics of the disease. The infections between cells are modelled by a network of connections, which could be terrestrial, between neighbouring cells, or long range, between cities by air, road or train traffic. In addition, since people make trips without apparent reason, noise is considered to account for them to carry contagion between two randomly chosen distant cells. Hence, there is a clear separation of the parameters related to the biological characteristics of the disease from the ones that represent the spatial spread of infections due to social behaviour. We demonstrate that these parameters provide sufficient information to trace the evolution of the pandemic in different situations. In order to show the predictive power of this kind of approach we have chosen three, in a number of ways different countries, Mexico, Finland and Iceland, in which the pandemics have followed different dynamic paths. Furthermore we find that our model seems quite capable of reproducing the path of the pandemic for months with few initial data. Unlike similar models, our model shows the emergence of multiple waves in the case when the disease becomes endemic.

Ranking non-pharmaceutical interventions against Covid-19 global pandemic using global sensitivity analysis-Effect on number of deaths

In this study, we use Global Sensitivity Analysis (GSA) to rank four non-pharmaceutical interventions (NPIs) in a deterministic compartmental model that might control Covid-19 related deaths in the United States. The NPIs are social distancing, isolation of infected individuals, identifying asymptomatically infected individuals through testing, and the use of face masks. The model uses a fear-based behavioral model that leads unmasked susceptible individuals to wear masks. The model parameters are estimated from the reported deaths for the United States of America from March 1, 2020 to November 26, 2020. Two GSA tools, the Sobol' sesntivity indices and Partial Rank Correlation Coefficient are used to obtain the rankings of the input parameters at different stages of the disease propagation. We found that social distancing and outward mask efficiency alone decreases the output uncertainty by 25-45%. Sobol' second order indices show that the combined effect of social distancing with increased mask usage and identifying and isolating asymptomatically infected individuals decreases uncertainty an additional 10%.

Estimating the COVID-19 prevalence and mortality using a novel data-driven hybrid model based on ensemble empirical mode decomposition

In this study, we proposed a new data-driven hybrid technique by integrating an ensemble empirical mode decomposition (EEMD), an autoregressive integrated moving average (ARIMA), with a nonlinear autoregressive artificial neural network (NARANN), called the EEMD-ARIMA-NARANN model, to perform time series modeling and forecasting based on the COVID-19 prevalence and mortality data from 28 February 2020 to 27 June 2020 in South Africa and Nigeria. By comparing the accuracy level of forecasting measurements with the basic ARIMA and NARANN models, it was shown that this novel data-driven hybrid model did a better job of capturing the dynamic changing trends of the target data than the others used in this work. Our proposed mixture technique can be deemed as a helpful policy-supportive tool to plan and provide medical supplies effectively. The overall confirmed cases and deaths were estimated to reach around 176,570 [95% uncertainty level (UL) 173,607 to 178,476] and 3454 (95% UL 3384 to 3487), respectively, in South Africa, along with 32,136 (95% UL 31,568 to 32,641) and 788 (95% UL 775 to 804) in Nigeria on 12 July 2020 using this data-driven EEMD-ARIMA-NARANN hybrid technique. The contributions of this study include three aspects. First, the proposed hybrid model can better capture the dynamic dependency characteristics compared with the individual models. Second, this new data-driven hybrid model is constructed in a more reasonable way relative to the traditional mixture model. Third, this proposed model may be generalized to estimate the epidemic patterns of COVID-19 in other regions.

Estimation and optimal control of the multiscale dynamics of Covid-19: a case study from Cameroon

This work aims at a better understanding and the optimal control of the spread of the new severe acute respiratory corona virus 2 (SARS-CoV-2). A multi-scale model giving insights on the virus population dynamics, the transmission process and the infection mechanism is proposed first. Indeed, there are human to human virus transmission, human to environment virus transmission, environment to human virus transmission and self-infection by susceptible individuals. The global stability of the disease-free equilibrium is shown when a given threshold T 0 is less or equal to 1 and the basic reproduction number R 0 is calculated. A convergence index T 1 is also defined in order to estimate the speed at which the disease extincts and an upper bound to the time of infectious extinction is given. The existence of the endemic equilibrium is conditional and its description is provided. Using Partial Rank Correlation Coefficient with a three levels fractional experimental design, the sensitivity of  R 0 , T 0 and T 1 to control parameters is evaluated. Following this study, the most significant parameter is the probability of wearing mask followed by the probability of mobility and the disinfection rate. According to a functional cost taking into account economic impacts of SARS-CoV-2, optimal fighting strategies are determined and discussed. The study is applied to real and available data from Cameroon with a model fitting. After several simulations, social distancing and the disinfection frequency appear as the main elements of the optimal control strategy against SARS-CoV-2.

A Dynamic Model of Multiple Time-Delay Interactions between the Virus-Infected Cells and Body’s Immune System with Autoimmune Diseases

The immune system is a complex interconnected network consisting of many parts including organs, tissues, cells, molecules and proteins that work together to protect the body from illness when germs enter the body. An autoimmune disease is a disease in which the body’s immune system attacks healthy cells. It is known that when the immune system is working properly, it can clearly recognize and kill the abnormal cells and virus-infected cells. But when it doesn’t work properly, the human body will not be able to recognize the virus-infected cells and, therefore, it can attack the body’s healthy cells when there is no invader or does not stop an attack after the invader has been killed, resulting in autoimmune disease.; This paper presents a mathematical modeling of the virus-infected development in the body’s immune system considering the multiple time-delay interactions between the immune cells and virus-infected cells with autoimmune disease. The proposed model aims to determine the dynamic progression of virus-infected cell growth in the immune system. The patterns of how the virus-infected cells spread and the development of the body’s immune cells with respect to time delays will be derived in the form of a system of delay partial differential equations. The model can be used to determine whether the virus-infected free state can be reached or not as time progresses. It also can be used to predict the number of the body’s immune cells at any given time. Several numerical examples are discussed to illustrate the proposed model. The model can provide a real understanding of the transmission dynamics and other significant factors of the virus-infected disease and the body’s immune system subject to the time delay, including approaches to reduce the growth rate of virus-infected cell and the autoimmune disease as well as to enhance the immune effector cells.

Merits and Limitations of Mathematical Modeling and Computational Simulations in Mitigation of COVID-19 Pandemic: A Comprehensive Review

Mathematical models have assisted in describing the transmission and propagation dynamics of various viral diseases like MERS, measles, SARS, and Influenza; while the advanced computational technique is utilized in the epidemiology of viral diseases to examine and estimate the influences of interventions and vaccinations. In March 2020, the World Health Organization (WHO) has declared the COVID-19 as a global pandemic and the rate of morbidity and mortality triggers unprecedented public health crises throughout the world. The mathematical models can assist in improving the interventions, key transmission parameters, public health agencies, and countermeasures to mitigate this pandemic. Besides, the mathematical models were also used to examine the characteristics of epidemiological and the understanding of the complex transmission mechanism. Our literature study found that there were still some challenges in mathematical modeling for the case of ecology, genetics, microbiology, and pathology pose; also, some aspects like political and societal issues and cultural and ethical standards are hard to be characterized. Here, the recent mathematical models about COVID-19 and their prominent features, applications, limitations, and future perspective are discussed and reviewed. This review can assist in further improvement of mathematical models that will consider the current challenges of viral diseases.

Linear parameter varying model of COVID-19 pandemic exploiting basis functions

Current outbreaks of the COIVD-19 pandemic demonstrate a global threat. In this paper, a conceptual model is developed for the COVID-19 pandemic, in which the people in society are divided into Susceptible, Exposed, Minor infected (Those who need to be quarantined at home), Hospitalized (Those who are in need of hospitalization), Intensive infected (ventilator-in-need infected), Recovered and Deceased. In this paper, first, the model that is briefly called SEMHIRD for a sample country (Italy as an example) is considered. Then, exploiting the real data of the country, the parameters of the model are obtained by assuming some basis functions on the collected data and solving linear least square problems in each window of data to estimate the time-varying parameters of the model. Thus, the parameters are updated every few days, and the system behavior is modeled according to the changes in the parameters. Then, the Linear Parameter Varying (LPV) Model of COVID19 is derived, and its stability analysis is presented. In the end, the influence of different levels of social distancing and quarantine on the variation of severely infected and hospitalized people is studied.

Modeling and controlling the spread of epidemic with various social and economic scenarios

We propose a dynamical model for describing the spread of epidemics. This model is an extension of the SIQR (susceptible-infected-quarantined-recovered) and SIRP (susceptible-infected-recovered-pathogen) models used earlier to describe various scenarios of epidemic spreading. As compared to the basic SIR model, our model takes into account two possible routes of contagion transmission: direct from the infected compartment to the susceptible compartment and indirect via some intermediate medium or fomites. Transmission rates are estimated in terms of average distances between the individuals in selected social environments and characteristic time spans for which the individuals stay in each of these environments. We also introduce a collective economic resource associated with the average amount of money or income per individual to describe the socioeconomic interplay between the spreading process and the resource available to infected individuals. The epidemic-resource coupling is supposed to be of activation type, with the recovery rate governed by the Arrhenius-like law. Our model brings an advantage of building various control strategies to mitigate the effect of epidemic and can be applied, in particular, to modeling the spread of COVID-19.

Impact of pangolin bootleg market on the dynamics of COVID-19 model

In this paper we consider ant-eating pangolin as a possible source of the novel corona virus (COVID-19) and propose a new mathematical model describing the dynamics of COVID-19 pandemic. Our new model is based on the hypotheses that the pangolin and human populations are divided into measurable partitions and also incorporates pangolin bootleg market or reservoir. First we study the important mathematical properties like existence, boundedness and positivity of solution of the proposed model. After finding the threshold quantity for the underlying model, the possible stationary states are explored. We exploit linearization as well as Lyapanuv function theory to exhibit local stability analysis of the model in terms of the threshold quantity. We then discuss the global stability analyses of the newly introduced model and found conditions for its stability in terms of the basic reproduction number. It is also shown that for certain values of R 0 , our model exhibits a backward bifurcation. Numerical simulations are performed to verify and support our analytical findings.

Global sensitivity analysis of COVID-19 mathematical model☆

In this paper, we applied the Sobol’s method on an already existing mathematical model of coronavirus disease 2019 (covid-19). The objectives of this research work are to study the individual effects of involved parameters as well as combine (mutual) effects of parameters on output variables of covid-19 model. The study is also useful to identify the ranking of key model parameters and factors fixing. The ultimate goal is to identify the controlling parameters, which eventually will help decision makers to explore various policy options to control the covid-19 pandemic. For this purpose, first we present the model with its basic properties that are positivity and existence of solution. Then use the Sobol’s method to discuss the individual effects of involved parameters as well as combine (mutual) effects of parameters on output variables of covid-19 model. Finally, we present the results, discussions and concluding remarks about key model parameters and identifying the controlling parameters, which eventually will help decision makers to explore various policy options to control the covid-19 pandemic.

Structural modeling and phylogenetic analysis for infectious disease transmission pattern based on maximum likelihood tree approach

The contagious disease transmission pattern outbreak caused a massive human casualty and became a pandemic, as confirmed by the World Health Organization (WHO). The present research aims to understand the infectious disease transmission pattern outbreak due to molecular epidemiology. Hence, infected patients over time can spread infectious disease. The virus may develop further mutations, and that there might be a more toxic virulent strain, which leads to several environmental risk factors. Therefore, it is essential to monitor and characterize patient profiles, variants, symptoms, geographic locations, and treatment responses to analyze and evaluate infectious disease patterns among humans. This research proposes the Evolutionary tree analysis (ETA) for the molecular evolutionary genetic analysis to reduce medical risk factors. Furthermore, The Maximum likelihood tree method (MLTM) has been used to analyze the selective pressure, which is examined to identify a mutation that may influence the infectious disease transmission pattern's clinical progress. This study also utilizes ETA with Markov Chain Bayesian Statistics (MCBS) approach to reconstruct transmission trees with sequence information. The experimental shows that the proposed ETA-MCBS method achieves a 97.55% accuracy, prediction of 99.56%, and 98.55% performance compared to other existing methods.

Mathematical model for spreading of COVID-19 virus with the Mittag-Leffler kernel

In the Nidovirales order of the Coronaviridae family, where the coronavirus (crown-like spikes on the surface of the virus) causing severe infections like acute lung injury and acute respiratory distress syndrome. The contagion of this virus categorized as severed, which even causes severe damages to human life to harmless such as a common cold. In this manuscript, we discussed the SARS-CoV-2 virus into a system of equations to examine the existence and uniqueness results with the Atangana-Baleanu derivative by using a fixed-point method. Later, we designed a system where we generate numerical results to predict the outcome of virus spreadings all over India.

Complex dynamics in susceptible-infected models for COVID-19 with multi-drug resistance

Nowadays, exploring complex dynamic of epidemic models becomes a focal point for research after the outbreak of COVID-19 pandemic which has no vaccine or fully approved drug treatment up till now. Hence, complex dynamics in a susceptible-infected (SI) model for COVID-19 with multi-drug resistance (MDR) and its fractional-order counterpart are investigated. Existence of positive solution in fractional-order model is discussed. Local stability based on the fractional Routh-Hurwitz (FRH) conditions is considered. Also, new FRH conditions are introduced and proved for the fractional case (0,2]. All these FRH conditions are also applied to discuss local stability of the multi-drug resistance steady states. Chaotic attractors are also found in this model for both integer-order and fractional-order cases. Numerical tools such as Lyapunov exponents, Lyapunov spectrum and bifurcation diagrams are employed to confirm existence of these complex dynamics. This study helps to understand complex behaviors and predict spread of severe infectious diseases such as COVID-19.

CBRR Model for Predicting the Dynamics of the COVID-19 Epidemic in Real Time

Because of the lack of reliable information on the spread parameters of COVID-19, there is an increasing demand for new approaches to efficiently predict the dynamics of new virus spread under uncertainty. The study presented in this paper is based on the Case-Based Reasoning method used in statistical analysis, forecasting and decision making in the field of public health and epidemiology. A new mathematical Case-Based Rate Reasoning model (CBRR) has been built for the short-term forecasting of coronavirus spread dynamics under uncertainty. The model allows for predicting future values of the increase in the percentage of new cases for a period of 2–3 weeks. Information on the dynamics of the total number of infected people in previous periods in Italy, Spain, France, and the United Kingdom was used. Simulation results confirmed the possibility of using the proposed approach for constructing short-term forecasts of coronavirus spread dynamics. The main finding of this study is that using the proposed approach for Russia showed that the deviation of the predicted total number of confirmed cases from the actual one was within 0.3%. For the USA, the deviation was 0.23%.

Forecasting the epidemiological trends of COVID-19 prevalence and mortality using the advanced α-Sutte Indicator

Forecasting the epidemics of the diseases is very valuable in planning and supplying resources effectively. This study aims to estimate the epidemiological trends of the coronavirus disease 2019 (COVID-19) prevalence and mortality using the advanced α-Sutte Indicator, and its prediction accuracy level was compared with the most frequently adopted autoregressive integrated moving average (ARIMA) method. Time-series analysis was performed based on the total confirmed cases and deaths of COVID-19 in the world, Brazil, Peru, Canada and Chile between 27 February 2020 and 30 June 2020. By comparing the prediction reliability indices, including the root mean square error, mean absolute error, mean error rate, mean absolute percentage error and root mean square percentage error, the α-Sutte Indicator was found to produce lower forecasting error rates than the ARIMA model in all data apart from the prevalence testing set globally. The α-Sutte Indicator can be recommended as a useful tool to nowcast and forecast the COVID-19 prevalence and mortality of these regions except for the prevalence around the globe in the near future, which will help policymakers to plan and prepare health resources effectively. Also, the findings of our study may have managerial implications for the outbreak in other countries.

Estimating the Prevalence and Mortality of Coronavirus Disease 2019 (COVID-19) in the USA, the UK, Russia, and India

Objective

The aim of this study is to apply the advanced error-trend-seasonal (ETS) framework to forecast the prevalence and mortality series of COVID-19 in the USA, the UK, Russia, and India, and the predictive performance of the ETS framework was compared with the most frequently used autoregressive integrated moving average (ARIMA) model.

Materials and Methods

The prevalence and mortality data of COVID-19 in the USA, the UK, Russia, and India between 20 February 2020 and 15 May 2020 were extracted from the WHO website. Then, the data subsamples between 20 February 2020 and 3 May 2020 were treated as the training horizon, and the others were used as the testing horizon to construct the ARIMA models and the ETS models.

Results

Based on the model evaluation criteria, the ARIMA (0,2,1) and ETS (M,MD,N), sparse coefficient ARIMA (0,2,(1,6)) and ETS (A,AD,M), ARIMA (1,1,1) and ETS (A,MD,A), together with ARIMA (2,2,1) and ETS (A,M,A) specifications were identified as the preferred ARIMA and ETS models for the prevalence data in the USA, the UK, Russia, and India, respectively; the ARIMA (0,2,1) and ETS (M,A,M), ARIMA (0,2,1) and ETS (M,A,N), ARIMA (0,2,1) and ETS (A,A,N), coupled with ARIMA (0,2,2) and ETS (M,M,N) specifications were selected as the optimal ARIMA and ETS models for the mortality data in these four countries, respectively. Among these best-fitting models, the ETS models produced smaller forecasting error rates than the ARIMA models in all the datasets.

Conclusion

The ETS framework can be used to nowcast and forecast the long-term temporal trends of the COVID-19 prevalence and mortality in the USA, the UK, Russia, and India, and which provides a notable performance improvement over the most frequently used ARIMA model. Our findings can aid governments as a reference to prepare for and respond to the COVID-19 pandemic both in restricting the transmission of the disease and in lowering the disease-related deaths in the upcoming days.

Covid-19 pandemic and the unprecedented mobilisation of scholarly efforts prompted by a health crisis: Scientometric comparisons across SARS, MERS and 2019-nCoV literature

During the current century, each major coronavirus outbreak has triggered a quick and immediate surge of academic publications on its respective topic. The spike in research publications following the 2019 Novel Coronavirus (Covid-19) outbreak, however, has been like no other. The global crisis caused by the Covid-19 pandemic has mobilised scientific efforts at an unprecedented scale. In less than 5 months, more than 12,000 research items and in less than seven months, more than 30,000 items were indexed, while it is projected that the number could exceed 80,000 by the end of 2020, should the current trend continues. With the health crisis affecting all aspects of life, research on Covid-19 seems to have become a focal point of interest across many academic disciplines. Here, scientometric aspects of the Covid-19 literature are analysed and contrasted with those of the two previous major coronavirus diseases, i.e., Severe Acute Respiratory Syndrome (SARS) and Middle East Respiratory Syndrome (MERS). The focus is on the co-occurrence of key-terms, bibliographic coupling and citation relations of journals and collaborations between countries. Interesting recurring patterns across all three literatures were discovered. All three outbreaks have commonly generated three distinct cohorts of studies: (i) studies linked to public health response and epidemic control, (ii) studies on chemical constitution of the virus; and (iii) studies related to treatment, vaccine and clinical care. While studies affiliated with category (i) seem to have been relatively earliest to emerge, they have overall received relatively smaller number of citations compared to publications the two other categories. Covid-19 studies seem to have been disseminated across a broader variety of journals and across a more diverse range of subject areas. Clear links are observed between the geographical origins of each outbreak as well as the local geographical severity of each outbreak and the magnitude of research originated from regions. Covid-19 studies also display the involvement of authors from a broader variety of countries compared to SARS and MERS. Considering the speed at which the Covid-19-related literature is accumulating, an interesting dimension that warrants further exploration could be to assess if the quality and rigour of these publications have been affected.

A nonlinear epidemiological model considering asymptotic and quarantine classes for SARS CoV-2 virus

In this article, we develop a mathematical model considering susceptible, exposed, infected, asymptotic, quarantine/isolation and recovered classes as in case of COVID-19 disease. The facility of quarantine/isolation have been provided to both exposed and infected classes. Asymptotic individuals either recovered without undergo treatment or moved to infected class after some duration. We have formulated the reproduction number for the proposed model. Elasticity and sensitivity analysis indicates that model is more sensitive towards the transmission rate from exposed to infected classes rather than transmission rate from susceptible to exposed class. Analysis of global stability for the proposed model is studied through Lyapunov's function.

Dynamics of a fractional order mathematical model for COVID-19 epidemic

In this work, we formulate and analyze a new mathematical model for COVID-19 epidemic with isolated class in fractional order. This model is described by a system of fractional-order differential equations model and includes five classes, namely, S (susceptible class), E (exposed class), I (infected class), Q (isolated class), and R (recovered class). Dynamics and numerical approximations for the proposed fractional-order model are studied. Firstly, positivity and boundedness of the model are established. Secondly, the basic reproduction number of the model is calculated by using the next generation matrix approach. Then, asymptotic stability of the model is investigated. Lastly, we apply the adaptive predictor-corrector algorithm and fourth-order Runge-Kutta (RK4) method to simulate the proposed model. Consequently, a set of numerical simulations are performed to support the validity of the theoretical results. The numerical simulations indicate that there is a good agreement between theoretical results and numerical ones.

Emerging Technologies for Use in the Study, Diagnosis, and Treatment of Patients with COVID-19

INTRODUCTION

The COVID-19 pandemic has caused an unprecedented health and economic worldwide crisis. Innovative solutions are imperative given limited resources and immediate need for medical supplies, healthcare support and treatments.

AIM

The purpose of this review is to summarize emerging technologies being implemented in the study, diagnosis, and treatment of COVID-19.

RESULTS

Key focus areas include the applications of artificial intelligence, the use of Big Data and Internet of Things, the importance of mathematical modeling for predictions, utilization of technology for community screening, the use of nanotechnology for treatment and vaccine development, the utility of telemedicine, the implementation of 3D-printing to manage new demands and the potential of robotics.

CONCLUSION

The review concludes by highlighting the need for collaboration in the scientific community with open sharing of knowledge, tools, and expertise.

Crowding effects on the dynamics of COVID-19 mathematical model

A disastrous coronavirus, which infects a normal person through droplets of infected person, has a route that is usually by mouth, eyes, nose or hands. These contact routes make it very dangerous as no one can get rid of it. The significant factor of increasing trend in COVID19 cases is the crowding factor, which we named "crowding effects". Modeling of this effect is highly necessary as it will help to predict the possible impact on the overall population. The nonlinear incidence rate is the best approach to modeling this effect. At the first step, the model is formulated by using a nonlinear incidence rate with inclusion of the crowding effect, then its positivity and proposed boundedness will be addressed leading to model dynamics using the reproductive number. Then to get the graphical results a nonstandard finite difference (NSFD) scheme and fourth order Runge-Kutta (RK4) method are applied.