Impact of antimicrobial silver nanoparticles on anode respiring bacteria in a microbial electrolysis cell

Microbial community analysis of the biofilms of both working and counter electrodes in single-chamber microbial electrolysis cells

This study was conducted to delineate microbial community development and composition on both working and counter electrodes in single-chamber microbial electrolysis cells (MECs) using synthetic wastewater. Two separate bioelectrochemical reactors were inoculated with anaerobic sludge. The first was operated at an anodic potential poised at + 0.4 V and the second one at a cathodic potential poised at -0.7 V, both vs. an Ag/AgCl reference electrode. The performance of the MECs, including current generation, bioelectrochemical activity of the biofilms on both the working and counter electrodes, and chemical oxygen demand (COD) depletion were monitored over the last 45 days of operation. Scanning electron microscopy (SEM) and 16S rRNA gene sequencing were performed to delineate the development and morphology of the microbial communities on both the working and the counter electrodes. The current generated at the anodic working electrode provided evidence of the growth of anode-respiring exoelectrogens (Clostridium sensu stricto). Similarly, the Faradaic current data at the cathodic working electrode confirmed the formation of an electroactive biofilm dominated by acetoclastic and hydrogenotrophic methanogens (Methanothrix and Methanobacterium). Microbial communities on the counter electrodes were found to be richer but less diverse compared to those on the working electrodes. These communities were likely influenced by the fluctuating potentials at the counter electrodes. SEM observations were consistent with the microbial analysis. These findings demonstrate the ability of a mixed inoculum to shift towards anode-reducing and cathode methanogenic communities using a complex substrate on a constant working electrode and varying counter electrode potentials.

Microbial electrosynthesis technology for CO2 mitigation, biomethane production, and ex-situ biogas upgrading

Currently, global annual CO2 emissions from fossil fuel consumption are extremely high, surpassing tens of billions of tons, yet our capacity to capture and utilize CO2 remains below a small fraction of the amount generated. Microbial electrosynthesis (MES) systems, an integration of microbial metabolism with electrochemistry, have emerged as a highly efficient and promising bio-based carbon-capture-and-utilization technology over other conventional techniques. MES is a unique technology for lowering the atmospheric CO2 as well as CO2 in the biogas, and also simultaneously convert them to renewable bioenergy, such as biomethane. As such, MES techniques could be applied for biogas upgrading to generate high purity biomethane, which has the potential to meet natural gas standards. This article offers a detailed overview and assessment of the latest advancements in MES for biomethane production and biogas upgrading, in terms of selecting optimal methane production pathways and associated electron transfer processes, different electrode materials and types, inoculum sources and microbial communities, ion-exchange membrane, externally applied energy level, operating temperature and pH, mode of operation, CO2 delivery method, selection of inorganic carbon source and its concentration, start-up time, and system pressure. It also highlights the current MES challenges associated with upscaling, design and configuration, long-term stability, energy demand, techno-economics, achieving net negative carbon emission, and other operational issues. Moreover, we provide a summary of current and future opportunities to integrate MES with other unique biosystems, such as methanotrophic bioreactors, and incorporate quorum sensing, 3D printing, and machine learning to further develop MES as a better biomethane-producer and biogas upgrading technique.

Transcriptomic insights unveil the crucial roles of cytochromes, NADH, and pili in Ag(I) reduction by Geobacter sulfurreducens

Silver (Ag) is a pivotal transition metal with applications in multiple industries, necessitating efficient recovery techniques. Despite various proposed methods for silver recovery from wastewaters, challenges persist especially for low concentrations. In this context, bioreduction by bacteria like Geobacter sulfurreducens, offers a promising approach by converting Ag(I) to Ag nanoparticles. To reveal the mechanisms driving microbial Ag(I) reduction, we conducted transcriptional profiling of G. sulfurreducens under Ag(I)-reducing condition. Integrated transcriptomic and protein-protein interaction network analyses identified significant transcriptional shifts, predominantly linked to c-type cytochromes, NADH, and pili. When compared to a pilus-deficient strain, the wild-type strain exhibited distinct cytochrome gene expressions, implying specialized functional roles. Additionally, despite a down-regulation in NADH dehydrogenase genes, we observed up-regulation of specific downstream cytochrome genes, highlighting NADH's potential role as an electron donor in the Ag(I) reduction process. Intriguingly, our findings also highlight the significant influence of pili on the morphology of the resulting Ag nanoparticles. The presence of pili led to the formation of smaller and more crystallized Ag nanoparticles. Overall, our findings underscore the intricate interplay of cytochromes, NADH, and pili in Ag(I) reduction. Such insights suggest potential strategies for further enhancing microbial Ag(I) reduction.

Responses of syntrophic microbial communities and their interactions with polystyrene nanoplastics in a microbial electrolysis cell

Microbial electrochemical technologies are promising for simultaneous energy recovery and wastewater treatment. Although the inhibitory effects of emerging pollutants, particularly micro/nanoplastics (MPs/NPs), on conventional wastewater systems have been extensively studied, the current understanding of their impact on microbial electrochemical systems is still quite limited. Microplastics are plastic particles ranging from 1 μm to 5 mm. However, nanoplastics are smaller plastic particles ranging from 1 to 100 nm. Due to their smaller size and greater surface area, they can penetrate deeper into biofilm structures and cell membranes, potentially disrupting their integrity and leading to changes in biofilm composition and function. This study first reports the impact of polystyrene nanoplastics (PsNPs) on syntrophic anode microbial communities in a microbial electrolysis cell. Low concentrations of PsNPs (50 and 250 μg/L) had a minimal impact on current density and hydrogen production. However, 500 μg/L of PsNPs decreased the maximum current density and specific hydrogen production rate by ∼43 % and ∼48 %, respectively. Exposure to PsNPs increased extracellular polymeric substance (EPS) levels, with a higher ratio of carbohydrates to proteins, suggesting a potential defense mechanism through EPS secretion. The downregulation of genes associated with extracellular electron transfer was observed at 500 μg/L of PsNPs. Furthermore, the detrimental impact of 500 μg/L PsNPs on the microbiome was evident from the decrease in 16S rRNA gene copies, microbial diversity, richness, and relative abundances of key electroactive and fermentative bacteria. For the first time, this study presents the inhibitory threshold of any NPs on syntrophic electroactive biofilms within a microbial electrochemical system.

Acclimation of electroactive biofilms under different operating conditions: comprehensive analysis from architecture, composition, and metabolic activity

Electroactive biofilms (EABs) have aroused wide concern in waste treatment due to their unique capability of extracellular electron transfer with solid materials. The combined effect of different operating conditions on the formation, microbial architecture, composition, and metabolic activity of EABs is still unknown. In this study, the impact of three different factors (anode electrode, substrate concentration, and resistance) on the acclimation and performance of EABs was investigated. The results showed that the shortest start-up time of 127.3 h and highest power density of 0.84 W m-2 were obtained with carbon brush as electrode, low concentration of substrate (1.0 g L-1), and 1000 Ω external resistance (denoted as N1). The EABs under N1 condition also represented strongest redox capacity, lowest internal resistance, and close arrangement of bacteria. Moreover, the EABs cultured under different conditions both showed similar results, with direct electron transfer (DET) dominated from EABs to anode. Microbial community compositions indicated that EABs under N1 condition have lowest diversity and highest abundance of electroactive bacteria (46.68%). Higher substrate concentration (3.0 g L-1) promoted the proliferation of some other bacteria without electroactivity, which was adverse to EABs. The metabolic analysis showed the difference of genes related to electron transfer (cytochrome C and pili) and biofilm formation (xap) of EABs under different conditions, which further demonstrated the higher electroactivity of EABs under N1. These results provided a comprehensive understanding of the effect of different operating conditions on EABs including biofilm formation and electrochemical activity.

Response of electroactive biofilms from real wastewater to metal ion shock in bioelectrochemical systems

The electrochemical activity of bioelectrochemical systems (BESs) was proven to be dependent on the stability of electroactive biofilms (EABs), but the response of EABs based on real wastewater to external disturbances is not fully known. Herein, we used real wastewater (beer brewery wastewater) as a substrate for culturing EABs and found that current generation, biomass, redox activity and extracellular polymeric substances (EPS) content in those EABs were lower as compared to EABs cultured with synthetic wastewaters (acetate and glucose). However, the EABs from the beer brewery wastewater showed moderate anti-shock resistance capability. The proteins and humic acid in loosely bound EPS (LB-EPS) exhibited a positive linear relationship with current recovery after Ag⁺ shock, indicating the importance of LB-EPS for protecting the EABs. Fluorescence and Fourier transform infrared spectroscopy integrated with two-dimensional correlation spectroscopy verified that the spectra of the protein-like region of LB-EPS changed considerably under the interference of Ag⁺ concentration and the CO group of humic acid or proteins was mainly responsible for binding with Ag⁺ to attenuate its toxicity to the EABs. This is the first study revealing the underlying molecular mechanism of EABs cultured with real wastewater against external heavy metal shock and provides useful insights into enhancing the application of BESs in future water treatment.

Opportunities for visual techniques to determine characteristics and limitations of electro-active biofilms

Optimization of bio-electrochemical systems (BESs) relies on a better understanding of electro-active biofilms (EABfs). These microbial communities are studied with a range of techniques, including electrochemical, visual and chemical techniques. Even though each of these techniques provides very valuable and wide-ranging information about EABfs, such as performance, morphology and biofilm composition, they are often destructive. Therefore, the information obtained from EABfs development and characterization studies are limited to a single characterization of EABfs and often limited to one time point that determines the end of the experiment. Despite being scarcer and not as commonly reported as destructive techniques, non-destructive visual techniques can be used to supplement EABfs characterization by adding in-situ information of EABfs functioning and its development throughout time. This opens the door to EABfs monitoring studies that can complement the information obtained with destructive techniques. In this review, we provide an overview of visual techniques and discuss the opportunities for combination with the established electrochemical techniques to study EABfs. By providing an overview of suitable visual techniques and discussing practical examples of combination of visual with electrochemical methods, this review aims at serving as a source of inspiration for future studies in the field of BESs.

Long-Term Exposure and Effects of rGO-nZVI Nanohybrids and Their Parent Nanomaterials on Wastewater-Nitrifying Microbial Communities

Single nanomaterials and nanohybrids (NHs) can inhibit microbial processes in wastewater treatment, especially nitrification. While existing studies focus on short-term and acute exposures of single nanomaterials on wastewater microbial community growth and function, long-term, low-exposure, and emerging NHs need to be examined. These NHs have distinctly different physicochemical properties than their parent nanomaterials and, therefore, may exert previously unknown effects onto wastewater microbial communities. This study systematically investigated long-term [∼6 solid residence time [(SRT)] exposure effects of a widely used carbon-metal NH (rGO-nZVI = 1:2 and 1:0.2, mass ratio) and compared these effects to their single-parent nanomaterials (i.e., rGO and nZVI) in nitrifying sequencing batch reactors. nZVI and NH-dosed reactors showed relatively unaffected microbial communities compared to control, whereas rGO showed a significantly different (p = 0.022) and less diverse community. nZVI promoted a diverse community and significantly higher (p < 0.05) biomass growth under steady-state conditions. While long-term chronic exposure (10 mg·L^-1) of single nanomaterials and NHs had limited impact on long-term nutrient recovery, functionally, the reactors dosed with higher iron content, that is, nZVI and rGO-nZVI (1:2), promoted faster NH₄⁺-N removal due to higher biomass growth and upregulation of amoA genes at the transcript level, respectively. The transmission electron microscopy images and scanning electron microscopy─energy-dispersive X-ray spectroscopy analysis revealed high incorporation of iron in nZVI-dosed biomass, which promoted higher cellular growth and a diverse community. Overall, this study shows that NHs have unique effects on microbial community growth and function that cannot be predicted from parent materials alone.

Anode respiration-dependent biological nitrogen fixation by Geobacter sulfurreducens

The present nitrogen fixation industry is usually energy-intensive and environmentally detrimental. Therefore, it is appealing to find alternatives. Here, we achieved both a synchronized biological nitrogen fixation and electric energy production by using Geobacter sulfurreducens in a microbial electrochemical system. The results showed that G. sulfurreducens was able to fix nitrogen depending on anode respiration, producing a maximum current density of 0.17 ± 0.015 mA cm^-2 and a nitrogen-fixing activity of ca. 0.78 μmol C₂H₄ mg protein^-1 h^-1, thereby achieving a net total nitrogen-fixing rate of ca. 5.6 mg L^-1 day^-1. Specifically, nitrogen fixation did not impair coulombic efficiency. Transcriptomic and metabolic analyses demonstrated that anode respiration provided sufficient energy to drive nitrogen fixation, and in turn nitrogen fixation promoted anode respiration of the cell by increasing acetate catabolism but reducing acetate anabolism. Furthermore, we showed that G. sulfurreducens could be supplied in a bioelectrochemical system for N-deficient wastewater treatment to relieve N-deficiency stress contributing to the formation of an electroactive biofilm, thereby simultaneously achieving nitrogen fixation, current generation and dissoluble organic carbon removal. Our study revealed a synergistic effect between biological nitrogen fixation and current generation by G. sulfurreducens, providing a green nitrogen fixation alternative through shifting the nitrogen fixation field from energy consumption to energy production and having implications for N-deficient wastewater treatment.

Synthesis of silver nanoparticles using living electroactive biofilm protected by polydopamine

The biosynthesis of metal nanoparticles from precious metals has been of wide concern. Their antibacterial activity is a main bottleneck restricting the bacterial activity and reduction performance. Here, bio-electrochemical systems were used to harvest electroactive biofilms (EABs), where bacteria were naturally protected by extracellular polymeric substances to keep activity. The biofilm was further encapsulated with polydopamine (PDA) as additional shield. Silver nanoparticles (AgNPs) were biosynthesized on EABs, whose electroactivity could be fully recovered after Ag⁺ reduction. The PDA increased bacterial viability by 90%–105%, confirmed as an effective protection against antibacterial activity of Ag⁺/AgNPs. The biosynthetic process changed the component and function of the microbial community, shifting from bacterial Fe reduction to archaeal methanogenesis. These results demonstrated that the electrochemical acclimation of EABs and encapsulation with PDA were effective protective measures during the biosynthesis of AgNPs. These approaches have a bright future in the green synthesis of nanomaterials, biotoxic wastewater treatment, and sustainable bio-catalysis.

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The EABs formed using BESs had an efficient ability to recover Ag⁺ to AgNPs

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The bio-reduction efficiencies of AgNPs reached more than 94%

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The PDA increased by 90%–105% of the bacterial viability

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The biosynthesis process changed the microbial community

Sustainable Syntheses and Sources of Nanomaterials for Microbial Fuel/Electrolysis Cell Applications: An Overview of Recent Progress

The use of microbial fuel cells (MFCs) is quickly spreading in the fields of bioenergy generation and wastewater treatment, as well as in the biosynthesis of valuable compounds for microbial electrolysis cells (MECs). MFCs and MECs have not been able to penetrate the market as economic feasibility is lost when their performances are boosted by nanomaterials. The nanoparticles used to realize or decorate the components (electrodes or the membrane) have expensive processing, purification, and raw resource costs. In recent decades, many studies have approached the problem of finding green synthesis routes and cheap sources for the most common nanoparticles employed in MFCs and MECs. These nanoparticles are essentially made of carbon, noble metals, and non-noble metals, together with a few other few doping elements. In this review, the most recent findings regarding the sustainable preparation of nanoparticles, in terms of syntheses and sources, are collected, commented, and proposed for applications in MFC and MEC devices. The use of naturally occurring, recycled, and alternative raw materials for nanoparticle synthesis is showcased in detail here. Several examples of how these naturally derived or sustainable nanoparticles have been employed in microbial devices are also examined. The results demonstrate that this approach is valuable and could represent a solid alternative to the expensive use of commercial nanoparticles.

Simultaneous energy harvest and nitrogen removal using a supercapacitor microbial fuel cell

The insufficient removal of pollutants and bioelectricity production have become a bottleneck for high-concentration saline wastewater treatment through microbial fuel cell (MFC) technology. Herein, a novel supercapacitor MFC (SC-MFC) was constructed with carbon nanofibers composite electrodes to investigate pollutant removal ability, power generation, and electrochemical properties using real landfill leachate. The possible extracellular electron transfer and nitrogen element conversion pathways in the bioanode were also analyzed. Results showed that the SC-MFC had higher pollutant removal rates (COD: 59.4 ± 1.2%; NH₄⁺-N: 78.2 ± 1.6%; and TN: 77.8 ± 1.2%), smaller internal impedance R_t (∼6 Ω), higher exchange current density i₀ (2.1 × 10^-4 A cm^-2), and a larger catalytic current j₀ (704 μA cm^-2) with 60% leachate than those with 10% and 20% leachate, resulting in a power output of 298 ± 22 mW m^-2. Ammonium could be incorporated by chemoautotrophic bacteria to produce organic compounds that could be further utilized by heterotrophs to generate power when biodegradable organic matters are depleted. Three conversion pathways of nitrogen might be involved, including NH₄⁺ diffusion from anode to cathode chamber, nitrification, and the denitrification process. Additionally, cyclic voltammetry tests showed that both the direct electron transfer (DET) and the mediator electron transfer in bioanode were involved and dominated by DET. The microbial analysis revealed that the bioanode was dominated by salt-tolerant denitrifying bacteria (38.5%), which was deduced to be the key functional microorganism. The electrochemically active bacteria decreased significantly from 61.7% to 4% over three stages of leachate treatment. Overall, the SC-MFC has demonstrated the potential for wastewater treatment along with energy harvesting and provides a new avenue toward sustainable leachate management.

Changes in syntrophic microbial communities, EPS matrix, and gene-expression patterns in biofilm anode in response to silver nanoparticles exposure

Understanding the toxic effect of silver nanoparticles (AgNPs) on various biological wastewater treatment systems is of significant interest to researchers. In recent years, microbial electrochemical technologies have opened up new opportunities for bioenergy and chemicals production from organic wastewater. However, the effects of AgNPs on microbial electrochemical systems are yet to be understood fully. Notably, no studies have investigated the impact of AgNPs on a microbial electrochemical system fed with a complex fermentable substrate. Here, we investigated the impact of AgNPs (50 mg/L) exposure to a biofilm anode in a microbial electrolysis cell (MEC) fed with glucose. The volumetric current density was 29 ± 2.0 A/m³ before the AgNPs exposure, which decreased to 20 ± 2.2 A/m³ after AgNPs exposure. The biofilms produced more extracellular polymeric substances (EPS) to cope with the AgNPs exposure, while carbohydrate to protein ratio in EPS considerably increased from 0.4 to 0.7. Scanning electron microscope (SEM) imaging also confirmed the marked excretion of EPS, forming a thick layer covering the anode biofilms after AgNPs injection. Transmission electron microscope (TEM) imaging showed that AgNPs still penetrated some microbial cells, which could explain the deterioration of MEC performance after AgNPs exposure. The relative expression level of the quorum signalling gene (LuxR) increased by 30%. Microbial community analyses suggested that various fermentative bacterial species (e.g., Bacteroides, Synergistaceae_vadinCA02, Dysgonomonas, etc.) were susceptible to AgNPs toxicity, which led to the disruption of their syntrophic partnership with electroactive bacteria. The abundance of some specific electroactive bacteria (e.g., Geobacter species) also decreased. Moreover, decreased relative expressions of various extracellular electron transfer associated genes (omcB, omcC, omcE, omcZ, omcS, and pilA) were observed. However, the members of family Enterobacteriaceae, known to perform a dual function of fermentation and anodic respiration, became dominant after biofilm anode exposed to AgNPs. Thus, EPS extraction provided partial protection against AgNPs exposure.

Electrodes bioaugmentation promotes the removal of antibiotics from concentrated sludge in microbial electrolysis cells

Microbial electrolysis cells (MECs) had a potential to improve antibiotics removal from wastewater. However, research on antibiotics removal from concentrated sludge using MECs is still very limited. In this study, antibiotics removal and microbial responses in MECs treating concentrated sludge under different applied voltages (0.3 V-1.5 V) were investigated. Results showed that antibiotics removal efficiencies at 0.6 V and 1.0 V were 16.7%-26.6% higher than other applied voltages. The applied voltages had no obvious effects on the viability, activity and composition of microorganisms in the suspended sludge even up to 1.5 V. Bioelectrodes exhibited higher bioelectrocatalytic activity and denser microbial aggregation at 0.6 V and 1.0 V, under which higher antibiotics removal was also achieved. The enhanced removal of antibiotics at the optimal applied voltages was mainly contributed by the bioaugmentation of electrodes, but was irrelative with the electrochemical reaction and the microbial responses in suspended sludge.

3D biofilm visualization and quantification on granular bioanodes with magnetic resonance imaging

The use of microbial fuel cells (MFCs) for wastewater treatment fits in a circular economy context, as they can produce electricity by the removal of organic matter in the wastewater. Activated carbon (AC) granules are an attractive electrode material for bioanodes in MFCs, as they are cheap and provide electroactive bacteria with a large surface area for attachment. The characterization of biofilm growth on AC granules, however, is challenging due to their high roughness and three-dimensional structure. In this research, we show that 3D magnetic resonance imaging (MRI) can be used to visualize biofilm distribution and determine its volume on irregular-shaped single AC granules in a non-destructive way, while being combined with electrochemical and biomass analyses. Ten AC granules with electroactive biofilm (i.e. granular bioanodes) were collected at different growth stages (3 to 21 days after microbial inoculation) from a multi-anode MFC and T₁-weighted 3D-MRI experiments were performed for three-dimensional biofilm visualization. With time, a more homogeneous biofilm distribution and an increased biofilm thickness could be observed in the 3D-MRI images. Biofilm volumes varied from 0.4 μL (day 4) to 2 μL (day 21) and were linearly correlated (R² = 0.9) to the total produced electric charge and total nitrogen content of the granular bioanodes, with values of 66.4 C μL^-1 and 17 μg N μL^-1, respectively. In future, in situ MRI measurements could be used to monitor biofilm growth and distribution on AC granules.

Shift of biofilm and suspended bacterial communities with changes in anode potential in a microbial electrolysis cell treating primary sludge

This study, for the first time, documented microbial community shifts in response to the changes in anode potential in a microbial electrolysis cell (MEC) operated with primary sludge. At an anode potential of -0.4 V vs. Ag/AgCl, the MEC showed COD and VSS removal efficiencies of 73 ± 1% and 75 ± 2%, respectively. The volumetric current density and specific hydrogen production rate were 23 ± 1.2 A/m³, and 145 ± 4.1 L/m³-d, respectively. The anodic microbial community was consisted of various fermentative/hydrolytic bacteria (e.g., Bacteroides and Dysgonomonas) and anode-respiring bacteria (Geobacter), while different hydrolytic/fermentative bacteria were abundant in suspension. The MEC showed substantially inferior performance along with a higher accumulation of various volatile fatty acids when the anode potential was switched to more positive values (0 V and +0.4 V). Both biofilms and suspended communities were also shifted when the anode potential was changed. Notably, at +0.4 V, Geobacter genus entirely disappeared from the biofilms, while Paludibacter species (known fermentative bacteria) were selectively enriched in biofilms. Also, the relative abundance of genus Bacteroides (known hydrolytic bacteria) substantially decreased in both biofilms and suspension, which was correlated with the inferior hydrolysis of VSS. Quantitative comparison of biofilms and suspended microbial communities at different anode potentials revealed a sharp decrease in bacterial cell numbers in anode biofilms after changing anode potential from -0.4 V to +0.4 V. By contrast, bacterial cell numbers in suspension were slightly decreased. Collectively, these results provide new insights into the role of anode potential in shaping key microbial players associated with hydrolysis/fermentation and anodic respiration processes when MECs are operated with real biowastes.

Effect of silver nanoparticles on an integrated fixed-film activated sludge-sequencing batch reactor: Performance and community structure

The effects of silver nanoparticles (AgNPs) on reactor performance, extracellular polymeric substances composition and microbial community structure and function in integrated fixed-film activated sludge-sequencing batch reactors (IFAS-SBRs) were investigated. Results showed that the addition of AgNPs from 0.1 to 10 mg/L exhibited no significant effects on nutrient removal. The average overall removal of COD, NH₄⁺-N and PO₄^3--P was 96.6%, 99.9% and 98.8%, respectively. The introduction of AgNPs caused an increase in extracellular polymeric substances content for the sludge and biofilm of IFAS-SBRs. The release of Ag⁺ from AgNPs and lactate dehydrogenase test implied the low toxicity of AgNPs to IFAS-SBRs. High-throughput sequencing revealed that microbial community structure showed significant shifts at phylum and genus levels after long-term exposure to AgNPs, but core functional groups responsible for nutrient removal remained at high abundance. Bacterial function prediction indicated that the metabolic categories showed no significant shifts under AgNPs stress, therefore good process performance could still be achieved.