Mass mortality events and the role of necrophagous invertebrates

Necrophages and necrophiles: a review of their antibacterial defenses and biotechnological potential

With antibiotic resistance on the rise, there is an urgent need for new antibacterial drugs and products to treat or prevent infection. Many such products in current use, for example human and veterinary antibiotics and antimicrobial food preservatives, were discovered and developed from nature. Natural selection acts on all living organisms and the presence of bacterial competitors or pathogens in an environment can favor the evolution of antibacterial adaptations. In this review, we ask if vultures, blow flies and other carrion users might be a good starting point for antibacterial discovery based on the selection pressure they are under from bacterial disease. Dietary details are catalogued for over 600 of these species, bacterial pathogens associated with the diets are described, and an overview of the antibacterial defenses contributing to disease protection is given. Biotechnological applications for these defenses are then discussed, together with challenges facing developers and possible solutions. Examples include use of (a) the antimicrobial peptide (AMP) gene sarcotoxin IA to improve crop resistance to bacterial disease, (b) peptide antibiotics such as serrawettin W2 as antibacterial drug leads, (c) lectins for targeted drug delivery, (d) bioconversion-generated chitin as an antibacterial biomaterial, (e) bacteriocins as antibacterial food preservatives and (f) mutualistic microbiota bacteria as alternatives to antibiotics in animal feed. We show that carrion users encounter a diverse range of bacterial pathogens through their diets and interactions, have evolved many antibacterial defenses, and are a promising source of genes, molecules, and microbes for medical, agricultural, and food industry product development.

The decomposition process in two restricted access environments in a temperate climate: Hard-covered suitcases and wheeled bins

The succession, development, and behavior of necrophagous insects on decomposing remains are used by forensic entomologists to estimate the minimum post-mortem interval (minPMI). Carcasses are often recovered from concealed environments, such as burials, wrapping, suitcases and waste bins, where they are protected from abiotic and biotic factors, including carrion fauna. The present study represents the first comprehensive research on concealed environments in Australia. Stillborn piglets (Sus scrofa domesticus L.) placed in hard-covered suitcases (N = 40, restricted access) and wheeled bins (N = 20, partially restricted access) were compared with controls (N = 5, exposed) placed on the soil surface, over a period of 164 days (Austral winter to spring). The analysis compared the decomposition process patterns and considered the insect assemblages colonizing the carcasses in each concealment type and the controls. Results show that 1) insects were attracted to the control carcasses within hours of placement in the field (Day 1, D1), followed by wheeled bin carcasses (D3) and suitcase carcasses (D4); 2) carcasses reached skeletonization on D65 (exposed), D108 (wheeled bin) and D136 (suitcase); 3) the assemblages of necrophagous insect species were different between the exposed and the concealed carcasses; 4) blowflies (Diptera: Calliphoridae) were the most prevalent insects colonizing the controls and wheeled bins, while coffin flies (Diptera: Phoridae) were the most prevalent in the suitcases, with some colonized by black soldier flies (Diptera: Stratyiomiidae). The results of this research contribute to the understanding of decomposition processes and insect activity in restricted access environments and help provide a more accurate estimation of the minPMI in forensic cases.

Carcass size, not source or taxon, dictates breeding performance and carcass use in a burying beetle

Small vertebrate carcasses represent critical resources for many terrestrial organisms, including burying beetles, which rely on carcasses for survival and breeding. Carcass attributes can influence the reproduction of burying beetles, yet most studies on their breeding ecology have used laboratory-reared carcasses of limited sizes. We conducted breeding and feeding experiments using a wide size range of lab (laboratory mice) and wild carcasses (wild mammals, birds and reptiles) to investigate how carcass size, source and taxon affect various breeding outcomes (e.g. clutch size, brood size and brood mass) of the burying beetle Nicrophorus nepalensis. Our results reveal a hump-shaped relationship between carcass size and breeding performance, with optimal breeding outcomes occurring on medium-sized carcasses. Furthermore, despite the variation in carcass tissue nutritional composition, breeding outcomes and larval growth did not differ between the two carcass sources or among the three wild carcass taxa. Finally, we found a larval quality-quantity trade-off across the range of carcasses examined, with carcass size shaping the larval life-history traits. Overall, these results elucidate how carcass resources may influence the breeding performance of burying beetles. Importantly, our study provides solid evidence validating decades of research using lab carcasses to study the reproductive ecology of burying beetles.

Carrion ecology in inland aquatic ecosystems: a systematic review

Carrion ecology, i.e. the decomposition and recycling of dead animals, has traditionally been neglected as a key process in ecosystem functioning. Similarly, despite the large threats that inland aquatic ecosystems (hereafter, aquatic ecosystems) face, the scientific literature is still largely biased towards terrestrial ecosystems. However, there has been an increasing number of studies on carrion ecology in aquatic ecosystems in the last two decades, highlighting their key role in nutrient recirculation and disease control. Thus, a global assessment of the ecological role of scavengers and carrion in aquatic ecosystems is timely. Here, we systematically reviewed scientific articles on carrion ecology in aquatic ecosystems to describe current knowledge, identify research gaps, and promote future studies that will deepen our understanding in this field. We found 206 relevant studies, which were highly biased towards North America, especially in lotic ecosystems, covering short time periods, and overlooking seasonality, a crucial factor in scavenging dynamics. Despite the low number of studies on scavenger assemblages, we recorded 55 orders of invertebrates from 179 families, with Diptera and Coleoptera being the most frequent orders. For vertebrates, we recorded 114 species from 40 families, with birds and mammals being the most common. Our results emphasise the significance of scavengers in stabilising food webs and facilitating nutrient cycling within aquatic ecosystems. Studies were strongly biased towards the assessment of the ecosystem effects of carrion, particularly of salmon carcasses in North America. The second most common research topic was the foraging ecology of vertebrates, which was mostly evaluated through sporadic observations of carrion in the diet. Articles assessing scavenger assemblages were scarce, and only a limited number of these studies evaluated carrion consumption patterns, which serve as a proxy for the role of scavengers in the ecosystem. The ecological functions performed by carrion and scavengers in aquatic ecosystems were diverse. The main ecological functions were carrion as food source and the role of scavengers in nutrient cycling, which appeared in 52.4% (N = 108) and 46.1% (N = 95) of publications, respectively. Ecosystem threats associated with carrion ecology were also identified, the most common being water eutrophication and carrion as source of pathogens (2.4%; N = 5 each). Regarding the effects of carrion on ecosystems, we found studies spanning all ecosystem components (N = 85), from soil or the water column to terrestrial vertebrates, with a particular focus on aquatic invertebrates and fish. Most of these articles found positive effects of carrion on ecosystems (e.g. higher species richness, abundance or fitness; 84.7%; N = 72), while a minority found negative effects, changes in community composition, or even no effects. Enhancing our understanding of scavengers and carrion in aquatic ecosystems is crucial to assessing their current and future roles amidst global change, mainly for water-land nutrient transport, due to changes in the amount and speed of nutrient movement, and for disease control and impact mitigation, due to the predicted increase in occurrence and magnitude of mortality events in aquatic ecosystems.

Global change influences scavenging and carrion decomposition

Carrion decomposition is fundamental to nutrient cycling in terrestrial ecosystems because it provides a high-quality resource to diverse organisms. A conceptual framework incorporating all phases of carrion decomposition with the full community of scavengers is needed to predict the effects of global change on core ecosystem processes. Because global change can differentially impact scavenger guilds and rates of carrion decomposition, our framework explicitly incorporates complex interactions among microbial, invertebrate, and vertebrate scavenger communities across three distinct phases of carcass decomposition. We hypothesize that carrion decomposition rates will be the most impacted when global change affects carcass discovery rates and the foraging behavior of competing scavenger guilds.

Qualitative Analyses of Textile Damage (Cuts and Tears) Applied to Fabrics Exposed to the Decomposition of Carcasses and Associated Insect Activity in an Austral Summer

Fatal stabbings are the leading cause of homicide in countries with restricted access to firearms, such as Australia. The analysis of damage on clothing imparted by a sharp object can assist in the characterization of the weapon. However, decomposition and carrion insects can modify the features of the damage, impeding textile damage analysis and crime reconstruction. This study aimed to identify and characterize the modifications of textile damage over 47 days of decomposition during the summer season in Western Australia. Fabric modifications were analyzed on cotton, synthetic, and blended fabrics with standardized cuts and tears, wrapped on 99 stillborn piglets. Six unclothed piglets acted as controls, with three being stabbed. All piglets were placed simultaneously in the field alongside swatches of fabric. Analyses considered taphonomy, insect interactions, and any textile damage using optical microscopy and SEM. The results showed that carrion insects can modify existing cuts and tears and introduce new artifacts on textiles. The 100% cotton fabric was the most affected by mechanical and chemical degradation, especially cuts and areas stained with blood or decomposition fluids. The study highlights the combined effect of multiple factors on textile damage, including the type of fabric, initial damage, bloating, insect activity, and biodegradation.

Integrating terrestrial scavenging ecology into contemporary wildlife conservation and management

Scavenging plays a vital role in maintaining ecosystem health and contributing to ecological functions; however, research in this sub-discipline of ecology is underutilized in developing and implementing wildlife conservation and management strategies. We provide an examination of the literature and recommend priorities for research where improved understanding of scavenging dynamics can facilitate the development and refinement of applied wildlife conservation and management strategies. Due to the application of scavenging research broadly within ecology, scavenging studies should be implemented for informing management decisions. In particular, a more direct link should be established between scavenging dynamics and applied management programs related to informing pharmaceutical delivery and population control through bait uptake for scavenging species, prevention of unintentional poisoning of nontarget scavenging species, the epidemiological role that scavenging species play in disease dynamics, estimating wildlife mortalities, nutrient transfer facilitated by scavenging activity, and conservation of imperiled facultative scavenging species. This commentary is intended to provide information on the paucity of data in scavenging research and present recommendations for further studies that can inform decisions in wildlife conservation and management. Additionally, we provide a framework for decision-making when determining how to apply scavenging ecology research for management practices and policies. Due to the implications that scavenging species have on ecosystem health, and their overall global decline as a result of anthropic activities, it is imperative to advance studies in the field of scavenging ecology that can inform applied conservation and management programs.

Biotic responses to climate extremes in terrestrial ecosystems

Anthropogenic climate change is increasing the incidence of climate extremes. Consequences of climate extremes on biodiversity can be highly detrimental, yet few studies also suggest beneficial effects of climate extremes on certain organisms. To obtain a general understanding of ecological responses to climate extremes, we present a review of how 16 major taxonomic/functional groups (including microorganisms, plants, invertebrates, and vertebrates) respond during extreme drought, precipitation, and temperature. Most taxonomic/functional groups respond negatively to extreme events, whereas groups such as mosses, legumes, trees, and vertebrate predators respond most negatively to climate extremes. We further highlight that ecological recovery after climate extremes is challenging to predict purely based on ecological responses during or immediately after climate extremes. By accounting for the characteristics of the recovering species, resource availability, and species interactions with neighboring competitors or facilitators, mutualists, and enemies, we outline a conceptual framework to better predict ecological recovery in terrestrial ecosystems.

Passive directed dispersal of plants by animals

Conceptual gaps and imprecise terms and definitions may obscure the breadth of plant-animal dispersal relationships involved in directed dispersal. The term 'directed' indicates predictable delivery to favourable microsites. However, directed dispersal was initially considered uncommon in diffuse mutualisms (i.e. those involving many species), partly because plants rarely influence post-removal propagule fate without specialized adaptations. This rationale implies that donor plants play an active role in directed dispersal by manipulating vector behaviour after propagule removal. However, even in most classic examples of directed dispersal, participating plants do not influence animal behaviour after propagule removal. Instead, such plants may take advantage of vector attraction to favourable plant microsites, indicating a need to expand upon current interpretations of directed dispersal. We contend that directed dispersal can emerge whenever propagules are disproportionately delivered to favourable microsites as a result of predictably skewed vector behaviour. Thus, we propose distinguishing active and passive forms of directed dispersal. In active directed dispersal, the donor plant achieves disproportionate arrival to favourable microsites by influencing vector behaviour after propagule removal. By contrast, passive directed dispersal occurs when the donor plant takes advantage of vector behaviour to arrive at favourable microsites. Whereas predictable post-removal vector behaviour is dictated by characteristics of the donor plant in active directed dispersal, characteristics of the destination dictate predictable post-removal vector behaviour in passive directed dispersal. Importantly, this passive form of directed dispersal may emerge in more plant-animal dispersal relationships because specialized adaptations in donor plants that influence post-removal vector behaviour are not required. We explore the occurrence and consequences of passive directed dispersal using the unifying generalized gravity model of dispersal. This model successfully describes vectored dispersal by incorporating the influence of the environment (i.e. attractiveness of microsites) on vector movement. When applying gravity models to dispersal, the three components of Newton's gravity equation (i.e. gravitational force, object mass, and distance between centres of mass) become analogous to propagules moving towards a location based on characteristics of the donor plant, the destination, and relocation processes. The generalized gravity model predicts passive directed dispersal in plant-animal dispersal relationships when (i) animal vectors are predictably attracted to specific destinations, (ii) animal vectors disproportionately disperse propagules to those destinations, and (iii) those destinations are also favourable microsites for the dispersed plants. Our literature search produced evidence for these three conditions broadly, and we identified 13 distinct scenarios where passive directed dispersal likely occurs because vector behaviour is predictably skewed towards favourable microsites. We discuss the wide applicability of passive directed dispersal to plant-animal mutualisms and provide new insights into the vulnerability of those mutualisms to global change.

Is Resource Change a Useful Predictor of Carrion Insect Succession on Pigs and Humans?

Carrion is a dynamic and nutrient-rich resource that attracts numerous insect species that undergo succession due to the rapid change in the carrion resource. Despite this process being well-understood, few studies have examined resource change as a driver of carrion insect succession, and instead have focused on the effects of time per se, or on coarse, qualitative measures such as decay stage. Here we report on three field succession experiments using pig carcasses and human cadavers encompassing two winters and one summer. We quantified the effects of resource change (measured as total body score, TBS), carrion type, initial carrion mass, ambient temperature, and season on insect species richness and community composition. We found that all variables had an effect on different taxonomic or trophic components of the insect community composition, with the exception of initial carrion mass which had no effect. We found significant positive effects of TBS on beetle species richness and composition, while fly species richness was not significantly affected by TBS, but was by ambient temperature. TBS had a significant positive effect on all trophic groups, while ambient temperature also had a significant positive effect on the necrophages and predator/parasitoids. Our study indicates that resource change, as indicated by TBS, is an important driver of carrion insect species turnover and succession on carrion, and that TBS can provide information about insect ecological patterns on carrion that other temporal measures of change cannot.

Factors influencing scavenger guilds and scavenging efficiency in Southwestern Montana

Scavenging of carrion shapes ecological landscapes by influencing scavenger population demography, increasing inter- and intra-specific interactions, and generating ecosystem services such as nutrient cycling and disease moderation. Previous research found the cues promoting, or the constraints limiting, an individual's propensity or ability to scavenge vary widely, depending on anthropogenic and environmental factors. Here we investigated differences in scavenging patterns in a complex scavenger guild in Southwestern Montana. We used camera traps established at 13 carcass sites to monitor carcass detection, visitation, and consumption times, during 2016-2018 and generalized linear models to explore the influence of carcass characteristics, habitat features, and seasonality, on carcass selection and scavenging efficiency. We found that scavenger species diversity was higher at higher elevations and in grassland habitats. Scavenging efficiency was influenced inter alia by seasonality, distance to water, and elevation. We found that most carcass consumption was via facultative scavengers (bears, wolves, magpies, Corvus spp.) rather than turkey vultures, the only obligate scavengers in the study area. However, growing populations of turkey vultures may lead to increased competition with facultative scavengers over carrion, and could have cascading effects on food webs in this ecosystem.

Spatial impacts of a multi-individual grave on microbial and microfaunal communities and soil biogeochemistry

Decomposing vertebrates, including humans, result in pronounced changes in surrounding soil biogeochemistry, particularly nitrogen (N) and carbon (C) availability, and alter soil micro- and macrofauna. However, the impacts of subsurface human decomposition, where oxygen becomes limited and microbial biomass is generally lower, are far less understood. The goals of this study were to evaluate the impact of human decomposition in a multi-individual, shallow (~70 cm depth) grave on soil biogeochemistry and soil microbial and nematode communities. Three individuals were interred and allowed to decay for four years. Soils were collected from two depths (0‒5 and 30‒35 cm) along linear transects radiating from the grave as well as from within and below (85‒90 cm depth) the grave during excavation to assess how decomposition affects soil properties. Along radiating surface transects, several extracellular enzymes rates and nematode richness increased with increasing distance from the grave, and likely reflect physical site disruption due to grave excavation and infill. There was no evidence of carcass-sourced C and N lateral migration from the grave, at least at 30‒35 cm depth. Within the grave, soils exhibited significant N-enrichment (e.g., ammonium, dissolved organic N), elevated electrical conductivity, and elevated respiration rates with depth. Soil biogeochemistry within the grave, particularly in the middle (30‒35 cm) and base (70‒75 cm depth), was significantly altered by human decomposition. Mean microbial gene abundances changed with depth in the grave, demonstrating increased microbial presence in response to ongoing decomposition. Human-associated Bacteroides were only detected at the base of the grave where anoxic conditions prevailed. Nematode community abundance and richness were reduced at 70‒75 cm and not detectable below 85‒90 cm. Further, we identified certain Plectus spp. as potential indicators of enrichment due to decomposition. Here we demonstrate that human decomposition influences soil biogeochemistry, microbes, and microfauna up to four years after burial.