Resolving DOM fluorescence fractions during a Karenia brevis bloom patch on the Southwest Florida Shelf

Karenia brevis Extract Induces Cellular Entry through Distinct Mechanisms in Phagocytic RAW 264.7 Macrophages versus Non-Phagocytic Vero Cells

Marine algae extracts are an important area of potential drug discovery; however, nearly all studies to date have used non-fluorescent-based methods to determine changes in target cell activity. Many of the most robust immunological and cellular analyses rely on fluorescent probes and readouts, which can be problematic when the algae extract is fluorescent itself. In this study, we identified the fluorescent spectrum of an isolated extract from the marine dinoflagellate Karenia brevis, which included two fluorescing components: chlorophyll α and pheophytin α. When excited at 405 nm and 664 nm, the extract emitted fluorescence at 676 nm and 696 nm, respectively. The extract and its fluorescing components, chlorophyll α and pheophytin α, entered phagocytic RAW 264.7 macrophages and non-phagocytic Vero kidney cells through distinct mechanisms. When incubated with the extract and its main components, both the RAW 264.7 macrophages and the Vero cells accumulated fluorescence as early as 30 min and continued through 48 h. Vero kidney cells accumulated the K. brevis fluorescent extract through a dynamin-independent and acidified endosomal-dependent mechanism. RAW 264.7 macrophages accumulated fluorescent extract through a dynamin-independent, acidified endosomal-independent mechanism, which supports accumulation through phagocytosis. Furthermore, RAW 264.7 macrophages downregulated cell-surface expression of CD206 in response to extract stimulation indicating activation of phagocytic responses and potential immunosuppression of these immune cells. This study represents the first characterization of the cellular update of K. brevis extracts in phagocytic versus non-phagocytic cells. The data suggest the importance of understanding cellular uptake of fluorescing algae extracts and their mechanism of action for future drug discovery efforts.

Phytoplankton communities of the west coast of Florida - multiyear and seasonal responses to nutrient enrichment

Blooms of the harmful algae species Karenia brevis are frequent off the southwest coast of Florida despite having relatively slow growth rates. The regional frequency of these harmful algal blooms led to the examination of the dominant estuarine outflows for effects on both K. brevis and the phytoplankton community in general. There is comparatively little information on the growth rates of non-Karenia taxonomic groups other than diatoms. A seasonally based series (Fall, Winter, and Spring) of bioassay experiments were conducted to determine the nutrient response of the coastal phytoplankton community. Treatments included estuarine waters (Tampa Bay, Charlotte Harbor, and the Caloosahatchee River) applied in a 1:25 dilution added to coastal water to mimic the influence of estuarine water in a coastal environment. Other treatments were 5-15 μM additions of nitrogen (N), phosphorus (P), and silica (Si) species, amino acids, and N (urea) + P added to coastal water. Incubations were conducted under ambient conditions with shading for 48 h. Analyses of dissolved and particulate nutrients were coupled with HPLC analysis of characteristic photopigments and taxonomic assignments of biomass via CHEMTAX. The coastal phytoplankton community, dominated by diatoms, cyanophytes and prasinophytes, was significantly different both by bioassay and by season, indicating little seasonal fidelity in composition. Specific growth rates of chlorophyll a indicated no significant difference between any controls, any estuarine treatment, P, or Si treatments. Conditions were uniformly N-limited with the highest growth rates in diatom biomass. Despite differing initial communities, however, there were seasonally reproducible changes in community due to the persistent growth or decline of the various taxa, including haptophytes, cyanophytes, and cryptophytes. For the one bioassay in which K. brevis was present, the slow growth of K. brevis relative to diatoms in a mixed community was evident, indicating that identifying the seasonally based behavior of other taxa in response to nutrients is critical for the simulation of phytoplankton competition and the successful prediction of the region's harmful algal blooms.

Origins and characteristics of dissolved organic matter fueling harmful dinoflagellate blooms revealed by δ13C and D/L-Amino acid compositions

We measured the concentrations of dissolved inorganic and organic nutrients, dissolved organic carbon (DOC), total hydrolyzable amino acids (THAA), fluorescent dissolved organic matter (FDOM), phytoplankton pigments, and δ13C-DOC during the summer of 2019 in the harmful dinoflagellate bloom regions of the southern coast of Korea. In the harmful dinoflagellate bloom region, the concentrations of inorganic nitrogen were depleted, inhibiting the growth of diatoms, while the concentrations of dissolved organic components (nutrients, DOC, FDOM, and amino acids) which fuel dinoflagellates were unusually high. Thus, we attempted to investigate the origins and characteristics of DOM which fuels the harmful dinoflagellate blooms. The δ13C-DOC values (- 22.2‰ to - 18.2‰) indicate that the elevated DOC concentrations result from in-situ biological production rather than terrestrial inputs. The enantiomeric (D/L) ratios of THAA indicate that dissolved organic nitrogen was more labile in the early stage of harmful dinoflagellate bloom and became more refractory in the final stage. Our results suggest that the marine production of bioavailable DOM plays an important role in initiating and sustaining harmful dinoflagellate blooms.

Investigation of the variations in dissolved organic matter properties and complexations with two typical heavy metals under the influence of biodegradation: A survey of an entire lake

Biodegradation is a key factor determining the properties and metal binding behaviour of dissolved organic matter (DOM). In this study, the contributions of biodegradation to DOM properties and metal binding behaviour in Dongping Lake were explored by using synchronous fluorescence (SF) spectroscopy, two-dimensional correlation spectroscopy (2D-COS) excitation-emission matrix and parallel factor analysis (EEM-PARAFAC). According to the ratio of the fluorescence intensity of different materials to the entire fluorescence intensity (%F_max), protein-like substances were the main substances of DOM in this lake. The reduction of protein-like substances and the enhancement of humification could be found in the whole lake under the influence of biodegradation. 3 areas (Area A, Area B and Area C) were obtained by principal component analysis (PCA), however, PCA results suggested that DOM properties and sources had some differences in the 3 areas, and DOM bioavailability in Area C was stronger than that in the other 2 areas. With copper (Cu²⁺) and lead (Pb²⁺) addition, different substances exhibited various affinities to different metal types. The locations of crosspeaks in asynchronous maps illustrated that protein-like substances were more affiliative with Cu²⁺, while humic-like substances were bound to Pb²⁺ earlier. Biodegradation had a conspicuous impact the metal binding ability of DOM in Dongping Lake. The effective quenching constants (LogK) of protein-like substances (protein-like component 2: LogK_Cu = 3.85 ± 0.23, LogK_Pb = 3.32 ± 0.23) were higher than those of humic-like substances (humic-like component 3: LogK_Cu = 3.15 ± 0.02, LogK_Pb = 2.93 ± 0.17) for both Cu²⁺ and Pb²⁺ before biodegradation. When biodegradation was finished, binding ability of humic-like substances was enhanced from 3.15 ± 0.02 to 3.41 ± 0.10 for DOM-Cu and 2.93 ± 0.17 to 3.79 ± 0.15 for DOM-Pb. On a spatial scale, metal binding ability of DOM in Dongping Lake also changed due to the influence of biodegradation. For both DOM-Cu and DOM-Pb, binding ability in south of Dongping Lake was stronger than that in other areas with the end of biodegradation.

Novel Insights into Dissolved Organic Matter Processing Pathways in a Coastal Confined Aquifer System with the Highest Known Concentration of Geogenic Ammonium

High levels of geogenic ammonium in groundwater is a highly neglected nitrogen pool in coastal aquatic systems. Although organic matter (OM) mineralization is known to significantly influence geogenic ammonium enrichment, the detailed mechanism underlying ammonium enrichment based on dissolved organic matter (DOM) characterization in coastal aquifer systems remains unclear. In this study, we characterized the optical and molecular signatures of DOM coupled with hydrogeochemistry and multiple isotopes (H/O/C/N) to elucidate in detail the mechanisms underlying the anomalously high ammonium in the coastal confined aquifer system of the Pearl River Delta, which exhibits the highest reported geogenic ammonium concentration in groundwater on the Earth. We identified three DOM fluorescent components, a marine humic-like component (C1) and two other humic-like components (C2 and C3). The autochthonous OM was first processed to the C1 component, which was further transformed to C2 and C3 components. In terms of molecular classes, the processing pathway from bacterial- or algal-derived OM to aliphatic compounds and highly unsaturated-low O compounds was identified, and highly unsaturated-low O compounds were accumulated as the main products. Compounds containing two or three N atoms were processed, and compounds with one N atom gradually accumulated, which was further degraded into CHO compounds. The ammonium (up to 179 mg/L as N) was gradually enriched due to the decomposition of CHO+3N to CHO+2N, CHO+1N, and CHO compounds. Owing to the longer residence time and less frequent fresh water flushing, the produced ammonium was retained in the aquifer as a "long-term result". The contrasting DOM characteristics, together with the differing depositional and hydrogeological conditions, give rise to the higher levels of geogenic ammonium in coastal confined aquifer systems compared with inland alluvial-lacustrine confined aquifer systems. To our knowledge, this is the first study to characterize DOM and its relationship with geogenic ammonium in coastal aquifer systems.

Establishing a terrestrial proxy based on fluorescent dissolved organic matter from sediment pore waters in the East China Sea

Terrestrial organic matter occupies an important position in the oceanic organic carbon pool. Some terrestrial proxies, like the Branched and Isoprenoid Tetraether (BIT) index, have been applied successfully to indicate the relative abundance of terrestrial organic matter in marine sediments. A new terrestrial proxy derived from sediment pore water fluorescent dissolved matter (fluorescent dissolved organic matter (FDOM)) was developed in this study. Surface sediment samples were collected from forty-two sites in the coastal region of the East China Sea (ECS) to examine the distributional patterns of FDOM. Three protein-like components (C1, C4 and C5) and two humic-like components (C2 and C3) of FDOM were identified using fluorescence excitation-emission matrices parallel factor analysis (EEMs-PARAFAC). Spatially, the intensity of these five components generally increased from the coast to the ocean with protein-like components showing a more obvious trend, which suggested that all five components had autochthonous contribution. However, the C2 and C3 proportions, especially C2 that mainly corresponds to the proportion of peak A in fluorescence excitation-emission matrices, significantly decreased from the coast to the ocean and significantly correlated with the BIT index from corresponding solid fractions. We posit that part of the humic-like components from terrestrial organic matter in sediments are released into the C2 and C3 pools in pore waters, which may be constrained by specific environmental conditions. Thus, the FDOM from pore waters can be integrated with BIT index to validate the nature of FDOM and use it as a biomarker to reflect the terrestrial input of organic matter mediated by different biogeochemical processes in coastal oceans. The proportion of peak A responsible for the fluorescence of C2 was suggest as a new terrestrial derived from FDOM.

Influence of land use and rainfall on the optical properties of dissolved organic matter in a key drinking water reservoir in China

The concentration, source and composition of dissolved organic matter (DOM) in aquatic ecosystems are associated with land use and hydrological connectivity between terrestrial and aquatic systems. However, direct evidence of the effects of rainfall and land use on the variability of DOM in aquatic ecosystems is very limited. In this study, chromophoric DOM (CDOM) absorption and fluorescence spectroscopy were used to elucidate how rainfall and land use affect the variability of CDOM in the watershed of Lake Tianmu, a key drinking water reservoir in the Yangtze River Delta. The mean values of the fluorescence intensity (F_max) of parallel factor analysis-derived humic-like components (C1, C3, C6) and tryptophan-like components C5 were higher in the southeastern inflowing river mouths than those downstream of the lake outlet regions. The upstream tributaries were mainly dominated by humic-like materials, while the lake was mainly dominated by protein-like materials. The F_max values of four humic-like components and two tryptophan-like components all increased significantly as the %woodland decreased, but %anthropogenic land use (%cropland+%urban construction area) increased. The F_max of the humic-like components at the inflowing tributaries and the lake increased with increasing rainfall during storm events, and the value was especially pronounced at the inflowing river mouths. We concluded that land use and hydrological conditions play an important role in influencing the CDOM source and optical composition, and these findings provide insights for the understanding of aquatic ecosystem metabolism and reservoir water quality management.

Characterization and sources of colored dissolved organic matter in a coral reef ecosystem subject to ultramafic erosion pressure (New Caledonia, Southwest Pacific)

The eastern lagoon of New Caledonia (NC, Southwest Pacific), listed as a UNESCO World Heritage site, hosts the world's second longest double-barrier coral reef. This lagoon receives river inputs, oceanic water arrivals, and erosion pressure from ultramafic rocks, enriched in nickel (Ni) and cobalt (Co). The aim of this study was to characterize colored dissolved organic matter (CDOM), as well as to determine its main sources and its possible relationships (through the use of Pearson correlation coefficients, r) with biogeochemical parameters, plankton communities and trace metals in the NC eastern lagoon. Water samples were collected in March 2016 along a series of river/lagoon/open-ocean transects. The absorption coefficient at 350nm (a₃₅₀) revealed the influence of river inputs on the CDOM distribution. The high values of spectral slope (S_275-295, >0.03m^-1) and the low values of specific ultraviolet absorbance (SUVA₂₅₄, <4Lmg-C^-1m^-1) highlighted the photodegradation of CDOM in surface waters. The application of parallel factor analysis (PARAFAC) on excitation-emission matrices (EEMs) allowed the identification of four CDOM components: (1) one humic- and one tyrosine-like fluorophores. They had terrestrial origin, exported through rivers and undergoing photo- and bio-degradation in the lagoon. These two fluorophores were linked to manganese (Mn) in southern rivers (r=0.46-0.50, n=21, p<0.05). (2) A tryptophan-like fluorophore, which exhibited higher levels offshore. It would be potentially released from the coral reef. (3) A second tyrosine-like ("tyrosine 2-like") fluorophore. Linked to Prochlorococcus cyanobacteria (r=0.39, n=47, p<0.05), this fluorophore would have an oceanic origin and enter in the lagoon through its southern and northern extremities. It also displayed relationships with Ni and Co content (r=0.53-0.54, n=21, p<0.05). This work underlines the diversity of CDOM sources in the NC eastern lagoon.