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Duan X, Li N, Cooper DML, Ding XF, Chen X, Zhu N. Low-density tissue scaffold imaging by synchrotron radiation propagation-based imaging computed tomography with helical acquisition mode. JOURNAL OF SYNCHROTRON RADIATION 2023; 30:417-429. [PMID: 36891855 PMCID: PMC10000810 DOI: 10.1107/s1600577523000772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 01/29/2023] [Indexed: 06/18/2023]
Abstract
Visualization of low-density tissue scaffolds made from hydrogels is important yet challenging in tissue engineering and regenerative medicine (TERM). For this, synchrotron radiation propagation-based imaging computed tomography (SR-PBI-CT) has great potential, but is limited due to the ring artifacts commonly observed in SR-PBI-CT images. To address this issue, this study focuses on the integration of SR-PBI-CT and helical acquisition mode (i.e. SR-PBI-HCT) to visualize hydrogel scaffolds. The influence of key imaging parameters on the image quality of hydrogel scaffolds was investigated, including the helical pitch (p), photon energy (E) and the number of acquisition projections per rotation/revolution (Np), and, on this basis, those parameters were optimized to improve image quality and to reduce noise level and artifacts. The results illustrate that SR-PBI-HCT imaging shows impressive advantages in avoiding ring artifacts with p = 1.5, E = 30 keV and Np = 500 for the visualization of hydrogel scaffolds in vitro. Furthermore, the results also demonstrate that hydrogel scaffolds can be visualized using SR-PBI-HCT with good contrast while at a low radiation dose, i.e. 342 mGy (voxel size of 26 µm, suitable for in vivo imaging). This paper presents a systematic study on hydrogel scaffold imaging using SR-PBI-HCT and the results reveal that SR-PBI-HCT is a powerful tool for visualizing and characterizing low-density scaffolds with a high image quality in vitro. This work represents a significant advance toward the non-invasive in vivo visualization and characterization of hydrogel scaffolds at a suitable radiation dose.
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Affiliation(s)
- Xiaoman Duan
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Naitao Li
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - David M. L. Cooper
- Department of Anatomy, Physiology and Pharmacology, College of Medicine, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Xiao Fan Ding
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Xiongbiao Chen
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Department of Mechanical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
| | - Ning Zhu
- Division of Biomedical Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Department of Chemical and Biological Engineering, College of Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada
- Canadian Light Source, Saskatoon, SK S7N 2V3, Canada
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Xu J, Wang Z, van Gogh S, Rawlik M, Spindler S, Stampanoni M. Intensity-based iterative reconstruction for helical grating interferometry breast CT with static grating configuration. OPTICS EXPRESS 2022; 30:13847-13863. [PMID: 35472989 DOI: 10.1364/oe.455967] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Accepted: 03/30/2022] [Indexed: 06/14/2023]
Abstract
Grating interferometry breast computed tomography (GI-BCT) has the potential to provide enhanced soft tissue contrast and to improve visualization of cancerous lesions for breast imaging. However, with a conventional scanning protocol, a GI-BCT scan requires longer scanning time and higher operation complexity compared to conventional attenuation-based CT. This is mainly due to multiple grating movements at every projection angle, so-called phase stepping, which is used to retrieve attenuation, phase, and scattering (dark-field) signals. To reduce the measurement time and complexity and extend the field of view, we have adopted a helical GI-CT setup and present here the corresponding tomographic reconstruction algorithm. This method allows simultaneous reconstruction of attenuation, phase contrast, and scattering images while avoiding grating movements. Experiments on simulated phantom and real initial intensity, visibility and phase maps are provided to validate our method.
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Fast X-ray Differential Phase Contrast Imaging with One Exposure and without Movements. Sci Rep 2019; 9:1113. [PMID: 30718674 PMCID: PMC6361880 DOI: 10.1038/s41598-018-37687-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Accepted: 12/12/2018] [Indexed: 11/08/2022] Open
Abstract
Grating interferometry X-ray differential phase contrast imaging (GI-XDPCI) has provided enhanced imaging contrast and attracted more and more interests. Currently the low imaging efficiency and increased dose remain to be the bottlenecks in the engineering applications of GI-XDPCI. Different from the widely-used X-ray absorption contrast imaging (XACI) found in hospitals and factories, GI-XDPCI involves a grating stepping procedure that is time-consuming and leads to a significantly increased X-ray exposure time. In this paper, we report a fast GI-XDPCI method without movements by designing a new absorption grating. There is no grating stepping in this approach, and all components remain stationary during the imaging. Three kinds of imaging contrasts are provided with greatly reduced time. This work is comprised of a numerical study of the method and its verification using a sub-set of the dataset measured with a standard GI-XDPCI system at the beam line BL13W1 of the Shanghai Synchrotron Radiation Facility (SSRF). These results have validated the presented method.
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Andrabi T, French KE, Qazilbash MH. New Cancer Therapies: Implications for the Perioperative Period. CURRENT ANESTHESIOLOGY REPORTS 2018; 8:362-367. [PMID: 32288653 PMCID: PMC7102123 DOI: 10.1007/s40140-018-0303-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Purpose of Review Cancer is on the rise. Standing on verge of exciting discoveries, research is being translated into therapies that are being widely administered to patients. Providing a hope for cure, where none existed before. This new body of knowledge has come from a better understanding of cancer genetics, molecular and sub molecular behavior, and understanding of cancer-generated cellular environments. These have led to development of immunotherapy and its many sub-genres, improvement and introduction of new radiation technologies, and decreasing toxicities of existing chemotherapies. Recent Findings The purpose of this review is to have a summary look at this huge landscape of cancer therapy. Specially looking at toxicities that an anesthesiologist should be familiar with while providing perioperative care for these patients, complications like tumor lysis syndrome, cytokine release syndromes, Kounis syndrome, myocarditis, encephalopathies, and pituitary failure need to be kept in mind. Summary One should be knowledgeable about these therapies and approach these patients with a high index of suspicion. Anesthesiologists will need to refine preoperative assessment with appropriate testing and intraoperative and postoperative management in collaboration with oncologists, while involving the expertise of internists, cardiologist, and endocrinologists in helping assess and manage these patients in the perioperative period.
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Affiliation(s)
- Tayab Andrabi
- 1Anesthesiology and PeriOper Med, Margaret and Ben Love Clinic (R6.1365), The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd.Unit 0409, Houston, TX 77030 USA
| | - Katy E French
- 2Anesthesiology and PeriOper Med, Margaret and Ben Love Clinic (R6.1370), The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd. Unit 001, Houston, TX 77030 USA
| | - Muzaffar H Qazilbash
- 3Stem Cell Transplantation, John Mendelsohn Faculty Center (FC5.2006), The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd. Unit 0423, Houston, TX 77030 USA
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Gasilov S, Mittone A, Horng A, Geith T, Bravin A, Baumbach T, Coan P. Hard X-ray index of refraction tomography of a whole rabbit knee joint: A feasibility study. Phys Med 2016; 32:1785-1789. [PMID: 27793538 DOI: 10.1016/j.ejmp.2016.10.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Revised: 09/30/2016] [Accepted: 10/01/2016] [Indexed: 10/20/2022] Open
Abstract
We report results of the computed tomography reconstruction of the index of refraction in a whole rabbit knee joint examined at the photon energy of 51keV. Refraction based images make it possible to delineate the bone, cartilage, and soft tissues without adjusting the contrast window width and level. Density variations, which are related to tissue composition and are not visible in absorption X-ray images, are detected in the obtained refraction based images. We discuss why refraction-based images provide better detectability of low contrast features than absorption images.
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Affiliation(s)
- S Gasilov
- Institute for Beam Physics and Technology, Karlsruhe Institute for Technology, Eggenstein 76344, Germany; Department of Physics, Ludwig Maximilians University, Garching 85748, Germany.
| | - A Mittone
- European Synchrotron Radiation Facility, Grenoble 38043, France; Department of Physics, Ludwig Maximilians University, Garching 85748, Germany
| | - A Horng
- Institute for Clinical Radiology, Ludwig-Maximilians-University, Munich 81377, Germany
| | - T Geith
- Institute for Clinical Radiology, Ludwig-Maximilians-University, Munich 81377, Germany
| | - A Bravin
- European Synchrotron Radiation Facility, Grenoble 38043, France
| | - T Baumbach
- Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute for Technology, Eggenstein 76344, Germany; Laboratory for Application of Synchrotron Radiation, Karlsruhe Institute for Technology, Eggenstein 76344, Germany
| | - P Coan
- Institute for Clinical Radiology, Ludwig-Maximilians-University, Munich 81377, Germany; Department of Physics, Ludwig Maximilians University, Garching 85748, Germany
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Wysokinski TW, Ianowski JP, Luan X, Belev G, Miller D, Webb MA, Zhu N, Chapman D. BMIT facility at the Canadian Light Source: Advances in X-ray phase-sensitive imaging. Phys Med 2016; 32:1753-1758. [PMID: 27453203 DOI: 10.1016/j.ejmp.2016.07.090] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/28/2016] [Revised: 07/14/2016] [Accepted: 07/15/2016] [Indexed: 12/21/2022] Open
Abstract
The BioMedical Imaging and Therapy (BMIT) facility [1,2] located at the Canadian Light Source, provides synchrotron-specific imaging and radiation therapy capabilities. There are two separate beamlines used for experiments: the bending magnet (05B1-1) and the insertion device (05ID-2) beamline. The bending magnet beamline provides access to monochromatic beam spanning a spectral range of 15-40keV, and the beam is 240mm wide in the POE-2 experimental hutch. Users can also perform experiments with polychromatic (pink) beam. The insertion device beamline was officially opened for general user program in 2015. The source for the ID beamline is a multi-pole, superconducting 4.3T wiggler. The high field gives a critical energy over 20keV. The optics hutches prepare a beam that is 220mm wide in the last experimental hutch SOE-1. The monochromatic spectral range spans 25-150+keV. Several different X-ray detectors are available for both beamlines, with resolutions ranging from 2μm to 200μm. BMIT provides a number of imaging techniques including standard absorption X-ray imaging, K-edge subtraction imaging (KES), in-line phase contrast imaging (also known as propagation based imaging, PBI) and Diffraction Enhanced Imaging/Analyzer Based Imaging (DEI/ABI), all in either projection or CT mode. PBI and DEI/ABI are particularly important tools for BMIT users since these techniques enable visualization of soft tissue and allow for low dose imaging.
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Affiliation(s)
| | - J P Ianowski
- Anatomy and Cell Biology, University of Saskatchewan, Saskatoon, SK, Canada
| | - X Luan
- Anatomy and Cell Biology, University of Saskatchewan, Saskatoon, SK, Canada
| | - G Belev
- Canadian Light Source, Saskatoon, SK, Canada
| | - D Miller
- Canadian Light Source, Saskatoon, SK, Canada
| | - M A Webb
- Canadian Light Source, Saskatoon, SK, Canada
| | - N Zhu
- Canadian Light Source, Saskatoon, SK, Canada
| | - D Chapman
- Canadian Light Source, Saskatoon, SK, Canada; Anatomy and Cell Biology, University of Saskatchewan, Saskatoon, SK, Canada
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Sena G, Nogueira L, Braz D, Almeida A, Gonzalez M, Azambuja P, Colaço M, Barroso R. Ecdysis period of Rhodnius prolixus head investigated using phase contrast synchrotron microtomography. Phys Med 2016; 32:812-7. [DOI: 10.1016/j.ejmp.2016.05.051] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 05/09/2016] [Accepted: 05/10/2016] [Indexed: 10/21/2022] Open
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Marschner M, Willner M, Potdevin G, Fehringer A, Noël PB, Pfeiffer F, Herzen J. Helical X-ray phase-contrast computed tomography without phase stepping. Sci Rep 2016; 6:23953. [PMID: 27052368 PMCID: PMC4823776 DOI: 10.1038/srep23953] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2014] [Accepted: 03/17/2016] [Indexed: 01/15/2023] Open
Abstract
X-ray phase-contrast computed tomography (PCCT) using grating interferometry provides enhanced soft-tissue contrast. The possibility to use standard polychromatic laboratory sources enables an implementation into a clinical setting. Thus, PCCT has gained significant attention in recent years. However, phase-contrast CT scans still require significantly increased measurement times in comparison to conventional attenuation-based CT imaging. This is mainly due to a time-consuming stepping of a grating, which is necessary for an accurate retrieval of the phase information. In this paper, we demonstrate a novel scan technique, which directly allows the determination of the phase signal without a phase-stepping procedure. The presented work is based on moiré fringe scanning, which allows fast data acquisition in radiographic applications such as mammography or in-line product analysis. Here, we demonstrate its extension to tomography enabling a continuous helical sample rotation as routinely performed in clinical CT systems. Compared to standard phase-stepping techniques, the proposed helical fringe-scanning procedure enables faster measurements, an extended field of view and relaxes the stability requirements of the system, since the gratings remain stationary. Finally, our approach exceeds previously introduced methods by not relying on spatial interpolation to acquire the phase-contrast signal.
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Affiliation(s)
- M Marschner
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany
| | - M Willner
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany
| | - G Potdevin
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany
| | - A Fehringer
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany
| | - P B Noël
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany.,Institut für diagnostische und interventionelle Radiologie, Klinikum rechts der Isar, Technische Universität München, 81675 München, Germany
| | - F Pfeiffer
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany.,Institut für diagnostische und interventionelle Radiologie, Klinikum rechts der Isar, Technische Universität München, 81675 München, Germany
| | - J Herzen
- Lehrstuhl für Biomedizinische Physik, Physik-Department &Institut für Medizintechnik, Technische Universität München, 85748 Garching, Germany
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Clark DP, Badea CT. Micro-CT of rodents: state-of-the-art and future perspectives. Phys Med 2014; 30:619-34. [PMID: 24974176 PMCID: PMC4138257 DOI: 10.1016/j.ejmp.2014.05.011] [Citation(s) in RCA: 143] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/31/2014] [Revised: 05/15/2014] [Accepted: 05/28/2014] [Indexed: 02/06/2023] Open
Abstract
Micron-scale computed tomography (micro-CT) is an essential tool for phenotyping and for elucidating diseases and their therapies. This work is focused on preclinical micro-CT imaging, reviewing relevant principles, technologies, and applications. Commonly, micro-CT provides high-resolution anatomic information, either on its own or in conjunction with lower-resolution functional imaging modalities such as positron emission tomography (PET) and single-photon emission computed tomography (SPECT). More recently, however, advanced applications of micro-CT produce functional information by translating clinical applications to model systems (e.g., measuring cardiac functional metrics) and by pioneering new ones (e.g. measuring tumor vascular permeability with nanoparticle contrast agents). The primary limitations of micro-CT imaging are the associated radiation dose and relatively poor soft tissue contrast. We review several image reconstruction strategies based on iterative, statistical, and gradient sparsity regularization, demonstrating that high image quality is achievable with low radiation dose given ever more powerful computational resources. We also review two contrast mechanisms under intense development. The first is spectral contrast for quantitative material discrimination in combination with passive or actively targeted nanoparticle contrast agents. The second is phase contrast which measures refraction in biological tissues for improved contrast and potentially reduced radiation dose relative to standard absorption imaging. These technological advancements promise to develop micro-CT into a commonplace, functional and even molecular imaging modality.
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Affiliation(s)
- D P Clark
- Center for In Vivo Microscopy, Department of Radiology, Duke University Medical Center, Box 3302, Durham, NC 27710, USA
| | - C T Badea
- Center for In Vivo Microscopy, Department of Radiology, Duke University Medical Center, Box 3302, Durham, NC 27710, USA.
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