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Mazur-Marzec H, Andersson AF, Błaszczyk A, Dąbek P, Górecka E, Grabski M, Jankowska K, Jurczak-Kurek A, Kaczorowska AK, Kaczorowski T, Karlson B, Kataržytė M, Kobos J, Kotlarska E, Krawczyk B, Łuczkiewicz A, Piwosz K, Rybak B, Rychert K, Sjöqvist C, Surosz W, Szymczycha B, Toruńska-Sitarz A, Węgrzyn G, Witkowski A, Węgrzyn A. Biodiversity of microorganisms in the Baltic Sea: the power of novel methods in the identification of marine microbes. FEMS Microbiol Rev 2024; 48:fuae024. [PMID: 39366767 PMCID: PMC11500664 DOI: 10.1093/femsre/fuae024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Revised: 09/21/2024] [Accepted: 10/03/2024] [Indexed: 10/06/2024] Open
Abstract
Until recently, the data on the diversity of the entire microbial community from the Baltic Sea were relatively rare and very scarce. However, modern molecular methods have provided new insights into this field with interesting results. They can be summarized as follows. (i) Although low salinity causes a reduction in the biodiversity of multicellular species relative to the populations of the North-East Atlantic, no such reduction occurs in bacterial diversity. (ii) Among cyanobacteria, the picocyanobacterial group dominates when considering gene abundance, while filamentous cyanobacteria dominate in means of biomass. (iii) The diversity of diatoms and dinoflagellates is significantly larger than described a few decades ago; however, molecular studies on these groups are still scarce. (iv) Knowledge gaps in other protistan communities are evident. (v) Salinity is the main limiting parameter of pelagic fungal community composition, while the benthic fungal diversity is shaped by water depth, salinity, and sediment C and N availability. (vi) Bacteriophages are the predominant group of viruses, while among viruses infecting eukaryotic hosts, Phycodnaviridae are the most abundant; the Baltic Sea virome is contaminated with viruses originating from urban and/or industrial habitats. These features make the Baltic Sea microbiome specific and unique among other marine environments.
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Affiliation(s)
- Hanna Mazur-Marzec
- Department of Marine Biology and Biotechnology, University of Gdansk, Al. Piłsudskiego 46, PL-81-378 Gdynia, Poland
| | - Anders F Andersson
- Department of Gene Technology, KTH Royal Institute of Technology, Science for Life Laboratory, Tomtebodavägen 23A, SE-171 65 Solna, Stockholm, Sweden
| | - Agata Błaszczyk
- Department of Marine Biology and Biotechnology, University of Gdansk, Al. Piłsudskiego 46, PL-81-378 Gdynia, Poland
| | - Przemysław Dąbek
- Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, PL-70-383 Szczecin, Poland
| | - Ewa Górecka
- Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, PL-70-383 Szczecin, Poland
| | - Michał Grabski
- International Centre for Cancer Vaccine Science, University of Gdansk, Kładki 24, 80-822 Gdansk, Poland
| | - Katarzyna Jankowska
- Department of Environmental Engineering Technology, Gdansk University of Technology, Narutowicza 11/12, PL-80-233 Gdansk, Poland
| | - Agata Jurczak-Kurek
- Department of Evolutionary Genetics and Biosystematics, University of Gdansk, Wita Stwosza 59, PL-80-308 Gdansk, Poland
| | - Anna K Kaczorowska
- Collection of Plasmids and Microorganisms, University of Gdansk, Wita Stwosza 59, PL-80-308 Gdansk, Poland
| | - Tadeusz Kaczorowski
- Laboratory of Extremophiles Biology, Department of Microbiology, University of Gdansk, Wita Stwosza 59, PL-80-308 Gdansk, Poland
| | - Bengt Karlson
- Swedish Meteorological and Hydrological Institute
, Research and Development, Oceanography, Göteborgseskaderns plats 3, Västra Frölunda SE-426 71, Sweden
| | - Marija Kataržytė
- Marine Research Institute, Klaipėda University, Universiteto ave. 17, LT-92294 Klaipeda, Lithuania
| | - Justyna Kobos
- Department of Marine Biology and Biotechnology, University of Gdansk, Al. Piłsudskiego 46, PL-81-378 Gdynia, Poland
| | - Ewa Kotlarska
- Institute of Oceanology, Polish Academy of Sciences, Powstańców Warszawy 55, PL-81-712 Sopot, Poland
| | - Beata Krawczyk
- Department of Biotechnology and Microbiology, Gdansk University of Technology, Narutowicza 11/12, PL-80-233 Gdansk, Poland
| | - Aneta Łuczkiewicz
- Department of Environmental Engineering Technology, Gdansk University of Technology, Narutowicza 11/12, PL-80-233 Gdansk, Poland
| | - Kasia Piwosz
- National Marine Fisheries Research Institute, Kołłątaja 1, PL-81-332 Gdynia, Poland
| | - Bartosz Rybak
- Department of Environmental Toxicology, Faculty of Health Sciences with Institute of Maritime and Tropical Medicine, Medical University of Gdansk, Dębowa 23A, PL-80-204 Gdansk, Poland
| | - Krzysztof Rychert
- Pomeranian University in Słupsk, Arciszewskiego 22a, PL-76-200 Słupsk, Poland
| | - Conny Sjöqvist
- Environmental and Marine Biology, Åbo Akademi University, Henriksgatan 2, FI-20500 Åbo, Finland
| | - Waldemar Surosz
- Department of Marine Biology and Biotechnology, University of Gdansk, Al. Piłsudskiego 46, PL-81-378 Gdynia, Poland
| | - Beata Szymczycha
- Institute of Oceanology, Polish Academy of Sciences, Powstańców Warszawy 55, PL-81-712 Sopot, Poland
| | - Anna Toruńska-Sitarz
- Department of Marine Biology and Biotechnology, University of Gdansk, Al. Piłsudskiego 46, PL-81-378 Gdynia, Poland
| | - Grzegorz Węgrzyn
- Department of Molecular Biology, University of Gdansk, Wita Stwosza 59, PL-80-308 Gdansk, Poland
| | - Andrzej Witkowski
- Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, PL-70-383 Szczecin, Poland
| | - Alicja Węgrzyn
- University Center for Applied and Interdisciplinary Research, University of Gdansk, Kładki 24, 80-822 Gdansk, Poland
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Delsmann J, Schmidt B, Oheim R, Amling M, Rolvien T, Siebert U. Bone mineral density and microarchitecture change during skeletal growth in harbor seals (Phoca vitulina) from the German coast. Sci Rep 2023; 13:7196. [PMID: 37137898 PMCID: PMC10156659 DOI: 10.1038/s41598-023-33911-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Accepted: 04/20/2023] [Indexed: 05/05/2023] Open
Abstract
Across species, the skeletal system shares mutual functions, including the protection of inner organs, structural basis for locomotion, and acting as an endocrine organ, thus being of pivotal importance for survival. However, insights into skeletal characteristics of marine mammals are limited, especially in the growing skeleton. Harbor seals (Phoca vitulina) are common marine mammals in the North and Baltic Seas and are suitable indicators of the condition of their ecosystem. Here, we analyzed whole-body areal bone mineral density (aBMD) by dual-energy X-ray absorptiometry (DXA) and lumbar vertebrae by high-resolution peripheral quantitative computed tomography (HR-pQCT) in neonate, juvenile, and adult harbor seals. Along skeletal growth, an increase in two-dimensional aBMD by DXA was paralleled by three-dimensional volumetric BMD by HR-pQCT, which could be attributed to an increasing trabecular thickness while trabecular number remained constant. Strong associations were observed between body dimensions (weight and length) and aBMD and trabecular microarchitecture (R2 = 0.71-0.92, all p < 0.001). To validate the results of the DXA measurement (i.e., the standard method used worldwide to diagnose osteoporosis in humans), we performed linear regression analyses with the three-dimensional measurements from the HR-pQCT method, which revealed strong associations between the two imaging techniques (e.g., aBMD and Tb.Th: R2 = 0.96, p < 0.0001). Taken together, our findings highlight the importance of systematic skeletal investigations in marine mammals during growth, illustrating the high accuracy of DXA in this context. Regardless of the limited sample size, the observed trabecular thickening is likely to represent a distinct pattern of vertebral bone maturation. As differences in nutritional status, among other factors, are likely to affect skeletal health, it appears essential to routinely perform skeletal assessments in marine mammals. Placing the results in the context of environmental exposures may allow effective measures to protect their populations.
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Affiliation(s)
- Julian Delsmann
- Department of Osteology and Biomechanics, University Medical Center Hamburg-Eppendorf, Lottestr. 59, 22529, Hamburg, Germany
- Division of Orthopedics, Department of Trauma and Orthopedic Surgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany
| | - Britta Schmidt
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstr. 6, 25746, Büsum, Germany
| | - Ralf Oheim
- Department of Osteology and Biomechanics, University Medical Center Hamburg-Eppendorf, Lottestr. 59, 22529, Hamburg, Germany
| | - Michael Amling
- Department of Osteology and Biomechanics, University Medical Center Hamburg-Eppendorf, Lottestr. 59, 22529, Hamburg, Germany
| | - Tim Rolvien
- Division of Orthopedics, Department of Trauma and Orthopedic Surgery, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246, Hamburg, Germany
| | - Ursula Siebert
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstr. 6, 25746, Büsum, Germany.
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Schmidt B, Hollenbach J, Mühlfeld C, Pfarrer C, Persson S, Kesselring T, Sonne C, Rigét F, Dietz R, Siebert U. Number of Primordial Follicles in Juvenile Ringed Seals (Pusa hispida) from the Gulf of Bothnia and West Greenland. Animals (Basel) 2022; 12:ani12050669. [PMID: 35268237 PMCID: PMC8909318 DOI: 10.3390/ani12050669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2022] [Revised: 03/03/2022] [Accepted: 03/04/2022] [Indexed: 11/16/2022] Open
Abstract
Primordial follicles are important for the reproduction cycle and, therefore, also for the survival of the whole population of a species. Mammals have a large pool of primordial follicles, and it is thought that this pool represents the total number of oocytes. The aim of the present study was to determine the total primordial follicle number of juvenile ringed seals (Pusa hispida) from the Gulf of Bothnia and Greenland. Overall, 52 ovaries from two ringed seal populations (West Greenland (N = 6), Gulf of Bothnia, region in the Baltic Sea (N = 46)) were examined. All ovaries were cut into 2 mm thick slices and every slice was embedded in paraffin. Out of each tissue block, a 5 µm thick section was cut and stained with haematoxylin-eosin. The mean volume of the follicles and the total volume of primordial follicles per ovary were estimated by stereology and used to calculate the total estimated number of primordial follicles. The median of the total estimated number of primordial follicles seemed to be higher in Baltic individuals than in Greenland individuals (Gulf of Bothnia = 565,657; Greenland Sea = 122,475). This widens the total range of primordial follicles in ringed seals overall and might bear some potential for discussions regarding the influence of endocrine disruptors and environmental influences depending on different regions/populations and their exposure to various factors. Thus, this study aims to provide basic reference data of the number and mean volume of ringed seal primordial follicles.
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Affiliation(s)
- Britta Schmidt
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstr. 6, D-25761 Büsum, Germany; (T.K.); (U.S.)
- Correspondence: ; Tel.: +49-511-856-8170
| | - Julia Hollenbach
- Institute of Anatomy, University of Veterinary Medicine Hannover, Foundation, Bischofsholer Damm 15, D-30173 Hannover, Germany; (J.H.); (C.P.)
| | - Christian Mühlfeld
- Institute of Functional and Applied Anatomy, Hannover Medical School, Carl-Neuberg-Str. 1, D-30625 Hannover, Germany;
| | - Christiane Pfarrer
- Institute of Anatomy, University of Veterinary Medicine Hannover, Foundation, Bischofsholer Damm 15, D-30173 Hannover, Germany; (J.H.); (C.P.)
| | - Sara Persson
- Department of Environmental Research and Monitoring, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden;
| | - Tina Kesselring
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstr. 6, D-25761 Büsum, Germany; (T.K.); (U.S.)
- Unit for Reproductive Medicine, University of Veterinary Medicine Hannover, Foundation, Bünteweg 2, D-30559 Hannover, Germany
| | - Christian Sonne
- Department of Bioscience—Marine Mammal Research, University of Aarhus, Frederiksborgvej 399, P.O. Box 358, DK-4000 Roskilde, Denmark; (C.S.); (R.D.)
| | - Frank Rigét
- Department of Ecoscience, University of Aarhus, Frederiksborgvej 399, P.O. Box 358, DK-4000 Roskilde, Denmark;
| | - Rune Dietz
- Department of Bioscience—Marine Mammal Research, University of Aarhus, Frederiksborgvej 399, P.O. Box 358, DK-4000 Roskilde, Denmark; (C.S.); (R.D.)
| | - Ursula Siebert
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstr. 6, D-25761 Büsum, Germany; (T.K.); (U.S.)
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Ometere Boyi J, Stokholm I, Hillmann M, Søndergaard J, Persson S, de Wit CA, Siebert U, Kristina L. Relationships between gene transcription and contaminant concentrations in Baltic ringed seals: A comparison between tissue matrices. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2022; 242:106035. [PMID: 34856463 DOI: 10.1016/j.aquatox.2021.106035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 11/10/2021] [Accepted: 11/13/2021] [Indexed: 06/13/2023]
Abstract
Ringed seals (Pusa hispida) are slowly recovering in the eastern and northern parts of the Baltic Sea after years of hunting pressure and contaminant exposure. Still, consequences of anthropogenic activities such as contaminant exposure and increasing temperatures are stressors that continue to have deleterious effects on their habitat and health. Transcription profiles of seven health-related genes involved in xenobiotic metabolism, endocrine disruption and stress were evaluated in blood, blubber, and liver of Baltic ringed seals in a multi-tissue approach. Selected persistent organic pollutants and total mercury concentrations were measured in blubber and liver, and muscle and liver of these animals, respectively. Concentrations of contaminants varied across tissues on a lipid weight basis but not with sex. mRNA transcript levels for all seven target genes did not vary between sexes or age classes. Transcript levels of thyroid hormone receptor alpha (TRα), retinoic acid receptor alpha (RARα) and heat shock protein 70 (HSP70) correlated with levels of persistent organic pollutants. TRα transcript levels also correlated positively with mercury concentrations in the liver. Of the three tissues assessed in this multi-tissue approach, blubber showed highest transcription levels of aryl hydrocarbon receptor nuclear translocator (ARNT), thyroid stimulating hormone receptor beta (TSHβ), oestrogen receptor alpha (ESR1) and peroxisome proliferator activated receptor alpha (PPARα). The wide range of genes expressed highlights the value of minimally invasive sampling (e.g. biopsies) for assessing health endpoints in free-ranging marine wildlife and the importance of identifying optimal matrices for targeted gene expression studies. This gene transcript profile study has provided baseline information on transcript levels of biomarkers for early on-set health effects in ringed seals and will be a useful guide to assess the impacts of environmental change in Baltic pinnipeds for conservation and management.
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Affiliation(s)
- Joy Ometere Boyi
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstrasse 6, Buesum D-25761, Germany
| | - Iben Stokholm
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstrasse 6, Buesum D-25761, Germany
| | - Miriam Hillmann
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstrasse 6, Buesum D-25761, Germany
| | - Jens Søndergaard
- Department of Bioscience, Aarhus University, Roskilde DK-4000, Denmark
| | - Sara Persson
- Swedish Museum of Natural History, Department of Environmental Research and Monitoring, Stockholm SE-10405, Sweden
| | - Cynthia A de Wit
- Department of Environmental Science, Stockholm University, Stockholm SE-10691, Sweden
| | - Ursula Siebert
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstrasse 6, Buesum D-25761, Germany
| | - Lehnert Kristina
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Werftstrasse 6, Buesum D-25761, Germany.
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Dietz R, Sonne C, Jenssen BM, Das K, de Wit CA, Harding KC, Siebert U, Olsen MT. The Baltic Sea: An ecosystem with multiple stressors. ENVIRONMENT INTERNATIONAL 2021; 147:106324. [PMID: 33326905 DOI: 10.1016/j.envint.2020.106324] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Revised: 12/01/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
This introductory chapter to our Environment International VSI does not need an abstract and therefore we just include our recommendations below in order to proceed with the resubmission. Future work should examine waterbirds as food web sentinels of multiple stressors as well as Baltic Sea food web dynamics of hazardous substances and how climate change may modify it. Also, future work should aim at further extending the new frameworks developed within BALTHEALTH for energy and contaminant transfer at the population level (Desforges et al., 2018, Cervin et al., 2020/this issue Silva et al., 2020/this issue) and their long term effects on Baltic Sea top predators, such as harbour porpoises, grey seals ringed seals, and white-tailed eagles. Likewise, the risk evaluation conducted for PCB in connection with mercury on Arctic wildlife (Dietz et al., 2019, not a BONUS BALTHEALTH product) could be planned for Baltic Sea molluscs, fish, bird and marine mammals in the future. Finally, future efforts could include stressors not covered by the BONUS BALTHEALTH project, such as food web fluxes, overexploitation, bycatches, eutrophication and underwater noise.
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Affiliation(s)
- R Dietz
- Department of Bioscience, Arctic Research Centre (ARC), Aarhus University, Faculty of Science and Technology, Frederiksborgvej 399, PO Box 358, DK-4000 Roskilde, Denmark.
| | - C Sonne
- Department of Bioscience, Arctic Research Centre (ARC), Aarhus University, Faculty of Science and Technology, Frederiksborgvej 399, PO Box 358, DK-4000 Roskilde, Denmark
| | - B M Jenssen
- Department of Bioscience, Arctic Research Centre (ARC), Aarhus University, Faculty of Science and Technology, Frederiksborgvej 399, PO Box 358, DK-4000 Roskilde, Denmark; Department of Biology, Norwegian University of Science and Technology, Høgskoleringen 5, 7491 Trondheim, Norway
| | - K Das
- Freshwater and Oceanic sciences Unit of reSearch (FOCUS), Laboratory of Oceanology, University of Liege, Allée du six Août 11, Bât. B6C, 4000 Liège, Belgium
| | - C A de Wit
- Department of Environmental Science, Stockholm University, Svante Arrheniusvägen 8, SE-10691 Stockholm, Sweden
| | - K C Harding
- Department of Biological and Environmental Sciences, Gothenburg University, Box 461, SE-40530 Gothenburg, Sweden
| | - U Siebert
- Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Foundation, Büsum, Germany
| | - M T Olsen
- Evolutionary Genomics, Globe Institute, University of Copenhagen, Øster Farimagsgade 5, DK-1353 Copenhagen K, Denmark
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