Morphological and cytological responses of ammonia (foraminifera) to copper contamination: implication for the use of foraminifera as bioindicators of pollution

Benthic foraminifera as bioindicators of marine pollution: A bibliometric approach to unravel trends, patterns and perspectives

Benthic foraminifera, single-celled marine organisms, are known for their wide distribution, high abundance and species diversity, test (i.e., shell) preservation in the sedimentary (e.g., historical) record, and sensitivity to environmental changes. Because of these characteristics, they have been widely used as bioindicators in environmental monitoring and, more recently, as Biological Quality Elements (BQEs) in the Ecological Quality Status (EcoQS) evaluation. The global scientific literature on benthic foraminifera as bioindicators was gathered from the Scopus database (overall 966 papers from 1973 to 2022) and explored with scientometric software. The outcomes highlight that the investigation of benthic foraminiferal response to pollutants started over 50 years ago. Indeed, not only the number of published documents has recently peaked (i.e., 2021 and 2022) but there has been also a growth in the percentages of papers falling within the Decision Sciences category that deals with the application of foraminiferal indices for the EcoQS assessment.

Are physiological responses in foraminifera reliable environmental stress bioindicators? A systematic review

Foraminifera are considered good bioindicators of environmental stress based on morphological abnormalities, but physiological responses occur far earlier and have not been evaluated as pollution markers. The aim of this review was to collate all published articles reporting physiological changes in foraminifera after environmental and anthropogenic stressors, to evaluate their reliability as early markers of environmental stress. We reviewed 70 studies, meeting the inclusion criteria, reporting 13 physiological effects classes after exposure to 17 different stressors. Immune functions, bleaching and lifecycle disruptions, were the most reported. Amphistegina and Ammonia showed high proportion of effects with lead and mercury, with a significant relationship between these heavy metals and the number of physiological effects classes in Ammonia, and between bleaching in Amphistegina gibbosa and Amphistegina lobifera with solar light and temperature. This suggests physiological responses are potentially reliable early indicators of environmental stress. It is necessary to increase quantitative physiological measures and standard exposure protocols in order to properly evaluate these organisms as pollution bioindicators.

Total and active benthic foraminiferal community and their response to heavy metals revealed by high throughput DNA and RNA sequencing in the Zhejiang coastal waters, East China Sea

Benthic foraminifera, large protists abundant in marine environments, have been widely used as bioindicators of environmental conditions. In this study, high-throughput sequencing based on small subunit rDNA and rRNA amplifications was used to investigate total and active benthic foraminifera community composition and diversity from nineteen and twelve superficial marine sediment samples in the Zhejiang coastal waters, respectively. The results showed that the dominant taxa of total foraminifera changed from Buliminellidae (hyaline) to Saccamminidae (agglutinated) from north to south along the coastal waters of Zhejiang Province. According to our survey, heavy metal contamination was moderate in Zhejiang coastal waters, and the potential ecological risks posed by Cd and Hg were higher. The contamination level of heavy metals at Yueqing Bay was the highest, followed by those at Sanmen Bay and Hangzhou Bay. Cd, Cu and grain size may be key factors affecting the distribution and composition of active foraminiferal communities.

Bioavailability of metals in coastal lagoon sediments and their influence on benthic foraminifera

Coastal lagoons experience removal and leaching of metals due to seasonal fluctuation of salinity coupled with pH and dissolved oxygen variability. Benthic foraminifers are susceptible to seasonal variation in physicochemical conditions. Assessment of bioavailable fraction of selected metals in sediments along the salinity gradient of the largest brackish lagoon in Asia- Chilika was carried out. Further, population density and abnormality index of foraminifera in the sediments were calculated to understand the influence of bioavailable metal on benthic foraminifera. Metal concentrations were higher in the low salinity regions and decreased towards the high salinity regions. This suggests river discharge controls the metal input and distribution in the lagoon. Overall, metal concentrations are high in the residual fraction (F4) followed by interplay within the reducible (F2) or oxidizable (F3) fractions, except for Mn. The seasonal fluctuations of pH and cyclic oxygen deficiency intensified the leaching of Fe, Cr, Cu, Pb, and Zn in the bioavailable fraction in the low salinity region of the lagoon. The presence of metals in bioavailable fractions impacted the normal growth of the abundant Ammonia species. Despite low bioavailable metal concentrations, higher morphological abnormalities were observed in the high salinity regions due to higher energy conditions near the sea. Therefore, abnormalities in the benthic foraminifera are attributed to bioavailability of metals from sediments and natural stress conditions in the coastal lagoon environment.

Effects of heavy elements (Pb, Cu, Zn) on algal food uptake by Elphidium excavatum (Foraminifera)

Foraminifera are unicellular organisms and play a pivotal role in the marine material cycles. Past observations have shown that the species Elphidium excavatum is the most common foraminifera in the Baltic Sea. Feeding experiments showed that the food uptake and thus the turnover of organic matter are influenced by changes of physical parameters (e.g., temperature, salinity). Since many areas of the Baltic Sea are strongly affected by anthropogenic activity and are strongly contaminated by heavy elements from shipping in the past, this study examined the effect of heavy elements pollution on the food uptake of the most common foraminiferal species of the Baltic Sea, E. excavatum which was a subject of several previous studies. Therefore, Baltic Sea seawater was enriched with metals at various levels above normal seawater levels and the uptake of ¹³C- and ¹⁵N-labelled phytodetritus was measured by isotope ratio mass spectrometry. For each combination of metal type, concentration and time point 20 individuals of E. excavatum (three replicates) were fed with the green algae Dunaliella tertiolecta. The effect of dose parameters was measured in a two-way analysis of variance. Significant differences of food uptake were observable at different types and levels of heavy elements in sea water. Even a 557-fold increase in the Pb concentration did not affect food uptake, whereas strong negative effects were found for higher levels of Zn (144 and 1044-fold) and especially for Cu (5.6 and 24.3-fold). In summary it can be stated, that an increase in the heavy elements pollution in the Kiel Fjord will lead to a significant reduction in the turnover of organic matter by foraminifera such as E. excavatum.

The spatial distribution of benthic foraminifera in the Pearl River Estuary, South China and its environmental significance

Thirty surface sediment samples were collected from the Pearl River Estuary, South China, and benthic foraminifera were analyzed in order to understand the relationship between foraminiferal assemblages and environmental parameters. Multivariate analyses showed that the foraminferal assemblages (i.e., abundance and diversity) are correlated with the hydro-sedimentary gradients within the estuary. In addition, the dominant faunal composition seems to be largely influenced by food availability and trace metal contamination in surface sediments. A comparison with historical data from 1980s demonstrated that the foraminiferal abundance and diversity in the lower estuary have dramatically decreased over the last three decades, together with a significant shift in the dominant species. This is most likely due to the cumulative impacts of eutrophication and Cu contamination caused by human activities in the Pearl River basin. This work confirms the value of benthic foraminifera as bio-indicators in polluted estuarine environments.

The response of benthic foraminifera to heavy metals and grain sizes: A case study from Hainan Island, China

Benthic foraminifera, heavy metals, and sediment grain sizes were studied in three bays of Hainan Island, and canonical correspondence analysis (CCA) and nonparametric regression were used to reveal the relationship between foraminifera and their environment. According to our survey, the three bays were moderately contaminated by Mo and As and uncontaminated to moderately contaminated by Pb, Zn, Cr, Sb, and Hg. The spatial pattern of heavy metals was comparable to sediment transport trends, indicating that their distribution was determined by sediment transport. Both living and dead foraminiferal assemblages were analyzed, and their compositions were similar, although the latter had a higher density and diversity. Based on the CCA method, species were divided into three groups, each of which responded differently to heavy metals and grain sizes. The response curves of individual species to heavy metals and grain sizes were obtained by using the Loess (locally weighted regression) method.

Geochemistry of large benthic foraminifera Amphisorus hemprichii as a high-resolution proxy for lead pollution in coastal environments

Anthropogenic lead (Pb) contamination resulting from the rapid growth of industrialization in coastal environments poses significant challenges. In this study, we report a novel approach utilising the large benthic foraminifera Amphisorus hemprichii as a biogeochemical archive for monitoring Pb pollution in tropical to warm-temperate coastal waters. Live juvenile specimens of A. hemprichii were cultured in the laboratory for 16 weeks with a range of seawater Pb concentrations. Lead uptake in both newly grown and pre-existing chambers of individual specimens was characterised using the microanalytical technique, Laser ablation-ICP mass spectrometry. We found that Pb concentration in the tests of cultured foraminifera in the laboratory is proportional to seawater [Pb] with the lead partition coefficient (K_D^Pb) of 8.37 ± 0.3. This calibration together with a new biomineralisation model now enables A. hemprichii to be utilised as a naturally occurring bio-archive to quantitatively monitor anthropogenic Pb pollution in coastal waters.

Test deformation and chemistry of foraminifera as response to anthropogenic heavy metal input

Benthic foraminifera are sensitive to environmental changes and widely used as tools to monitor pollution. Rising numbers of deformed tests are often used as indicator for elevated levels of heavy metals, but little is known about the relation between heavy metal incorporation into foraminiferal tests and the formation of test deformities. Here, two sediment cores from the south-eastern North Sea are compared, regarding the occurrence of deformed foraminiferal tests, foraminiferal test chemistry (ICP-MS) and bulk sediment Pb content (XRF). The total abundance of deformed foraminiferal tests seems not to align temporarily with historical heavy metal pollution. Therefore, we suggest that foraminifera react with test deformation to other environmental stressors than the studied heavy metals. Test chemistry reflects historical increased bulk sediment heavy metal content, despite a slight temporal offset. We propose that Pb (and Cd) are only incorporated into foraminiferal tests above a yet to be defined threshold of pollution.

Shell Growth of Large Benthic Foraminifera under Heavy Metals Pollution: Implications for Geochemical Monitoring of Coastal Environments

This study was promoted by the recent efforts using larger benthic foraminiferal (LBF) shells geochemistry for the monitoring of heavy metals (HMs) pollution in the marine environment. The shell itself acts as a recorder of the ambient water chemistry in low to extreme HMs-polluted environments, allowing the monitoring of recent-past pollution events. This concept, known as sclerochronology, requires the addition of new parts (i.e., new shell) even in extreme pollution events. We evaluated the physiological resilience of three LBF species with different shell types and symbionts to enriched concentrations of Cd, Cu, and Pb at levels several folds higher than the ecological criteria maximum concentration (CMC) (165-166, 33-43, 1001-1206 µg L^-1, respectively), which is derived from aquatic organisms' toxicity tests. The physiological response of the holobiont was expressed by growth rates quantified by the addition of new chambers (new shell parts), and by the chlorophyll a of the algal symbionts. The growth rate decrease varied between 0% and 30% compared to the unamended control for all HMs tested, whereas the algal symbionts exhibited a general non-fatal but significant response to Pb and Cu. Our results highlight that shell growth inhibition of LBF is predicted in extreme concentrations of 57 × CMC of Cu and 523 × CMC of Cd, providing a proof of concept for shell geochemistry monitoring, which is currently not used in the regulatory sectors.

Response of a kleptoplastidic foraminifer to heterotrophic starvation: photosynthesis and lipid droplet biogenesis

The aim of this work is to document the complex nutritional strategy developed by kleptoplastic intertidal foraminifera. We study the mixotrophic ability of a common intertidal foraminifer, Elphidium williamsoni, by (i) investigating the phylogenetic identity of the foraminiferal kleptoplasts, (ii) following their oxygenic photosynthetic capacity and (iii) observing the modification in cellular ultrastructural features in response to photoautotrophic conditions. This was achieved by coupling molecular phylogenetic analyses and TEM observations with non-destructive measurements of kleptoplast O2 production over a 15-day experimental study. Results show that the studied E. williamsoni actively selected kleptoplasts mainly from pennate diatoms and had the ability to produce oxygen, up to 13.4 nmol O2 cell-1 d-1, from low to relatively high irradiance over at least 15 days. Ultrastructural features and photophysiological data showed significant differences over time, the number of lipid droplets, residual bodies and the dark respiration increased; whereas, the number of kleptoplasts decreased accompanied by a minor decrease of the photosynthetic rate. These observations suggest that in E. williamsoni kleptoplasts might provide extra carbon storage through lipid droplets synthesis and highlight the complexity of E. williamsoni feeding strategy and the necessity of further dedicated studies regarding mechanisms developed by kleptoplastidic foraminifera for carbon partitioning and storage.

Assessing the Cadmium Effects on the Benthic Foraminifer Ammonia cf. parkinsoniana: An Acute Toxicity Test

Heavy metals are one of the most hazardous pollutants in marine environments because of their bioaccumulation and biomagnification capabilities. Among them, cadmium (Cd) has been considered as one of the most dangerous for marine organisms. Here we incubated Ammonia cf. parkinsoniana specimens, a benthic foraminiferal taxon used in previous experiments, for up to 48 h in natural seawater with different concentrations of Cd to unravel the physiological change. We document a reduced pseudopodial activity of the Cd-treated specimens at concentrations >10–100 ppb in comparison with the control specimens. Moreover, confocal images of Cd-treated specimens using Nile Red as a fluorescent probe reveal an enhanced intracellular neutral lipid accumulation in the form of lipid droplets at 6 h and 12 h. This bioassay experiment allows for the direct evaluation of Cd-dose to A. cf. parkinsoniana-response relationships under laboratory controlled conditions and provides complementary information to field observations as well as to water quality guidelines and thresholds.

The Puzzling Conservation and Diversification of Lipid Droplets from Bacteria to Eukaryotes

Membrane compartments are amongst the most fascinating markers of cell evolution from prokaryotes to eukaryotes, some being conserved and the others having emerged via a series of primary and secondary endosymbiosis events. Membrane compartments comprise the system limiting cells (one or two membranes in bacteria, a unique plasma membrane in eukaryotes) and a variety of internal vesicular, subspherical, tubular, or reticulated organelles. In eukaryotes, the internal membranes comprise on the one hand the general endomembrane system, a dynamic network including organelles like the endoplasmic reticulum, the Golgi apparatus, the nuclear envelope, etc. and also the plasma membrane, which are linked via direct lateral connectivity (e.g. between the endoplasmic reticulum and the nuclear outer envelope membrane) or indirectly via vesicular trafficking. On the other hand, semi-autonomous organelles, i.e. mitochondria and chloroplasts, are disconnected from the endomembrane system and request vertical transmission following cell division. Membranes are organized as lipid bilayers in which proteins are embedded. The budding of some of these membranes, leading to the formation of the so-called lipid droplets (LDs) loaded with hydrophobic molecules, most notably triacylglycerol, is conserved in all clades. The evolution of eukaryotes is marked by the acquisition of mitochondria and simple plastids from Gram-positive bacteria by primary endosymbiosis events and the emergence of extremely complex plastids, collectively called secondary plastids, bounded by three to four membranes, following multiple and independent secondary endosymbiosis events. There is currently no consensus view of the evolution of LDs in the Tree of Life. Some features are conserved; others show a striking level of diversification. Here, we summarize the current knowledge on the architecture, dynamics, and multitude of functions of the lipid droplets in prokaryotes and in eukaryotes deriving from primary and secondary endosymbiosis events.

Nanoparticle-Biological Interactions in a Marine Benthic Foraminifer

The adverse effects of engineered nanomaterials (ENM) in marine environments have recently attracted great attention although their effects on marine benthic organisms such as foraminifera are still largely overlooked. Here we document the effects of three negatively charged ENM, different in size and composition, titanium dioxide (TiO₂), polystyrene (PS) and silicon dioxide (SiO₂), on a microbial eukaryote (the benthic foraminifera Ammonia parkinsoniana) using multiple approaches. This research clearly shows the presence, within the foraminiferal cytoplasm, of metallic (Ti) and organic (PS) ENM that promote physiological stress. Specifically, marked increases in the accumulation of neutral lipids and enhanced reactive oxygen species production occurred in ENM-treated specimens regardless of ENM type. This study indicates that ENM represent ecotoxicological risks for this microbial eukaryote and presents a new model for the neglected marine benthos by which to assess natural exposure scenarios.

Surviving anoxia in marine sediments: The metabolic response of ubiquitous benthic foraminifera (Ammonia tepida)

High input of organic carbon and/or slowly renewing bottom waters frequently create periods with low dissolved oxygen concentrations on continental shelves and in coastal areas; such events can have strong impacts on benthic ecosystems. Among the meiofauna living in these environments, benthic foraminifera are often the most tolerant to low oxygen levels. Indeed, some species are able to survive complete anoxia for weeks to months. One known mechanism for this, observed in several species, is denitrification. For other species, a state of highly reduced metabolism, essentially a state of dormancy, has been proposed but never demonstrated. Here, we combined a 4 weeks feeding experiment, using 13C-enriched diatom biofilm, with correlated TEM and NanoSIMS imaging, plus bulk analysis of concentration and stable carbon isotopic composition of total organic matter and individual fatty acids, to study metabolic differences in the intertidal species Ammonia tepida exposed to oxic and anoxic conditions. Strongly contrasting cellular-level dynamics of ingestion and transfer of the ingested biofilm components were observed between the two conditions. Under oxic conditions, within a few days, intact diatoms were ingested, degraded, and their components assimilated, in part for biosynthesis of different cellular components: 13C-labeled lipid droplets formed after a few days and were subsequently lost (partially) through respiration. In contrast, in anoxia, fewer diatoms were initially ingested and these were not assimilated or metabolized further, but remained visible within the foraminiferal cytoplasm even after 4 weeks. Under oxic conditions, compound specific 13C analyses showed substantial de novo synthesis by the foraminifera of specific polyunsaturated fatty acids (PUFAs), such as 20:4(n-6). Very limited PUFA synthesis was observed under anoxia. Together, our results show that anoxia induced a greatly reduced rate of heterotrophic metabolism in Ammonia tepida on a time scale of less than 24 hours, these observations are consistent with a state of dormancy.

Shell fluctuating asymmetry in the sea-dwelling benthic bivalve Mytilus galloprovincialis (Lamarck, 1819) as morphological markers to detect environmental chemical contamination

Investigations on asymmetries showed that deviations from perfect bilateral symmetry are interpreted as environmental changes inducing developmental instability. Since morphological abnormalities increase with pollution, deformations may be considered indicators of the organism exposition to pollution. Therefore, the onset of asymmetry in otherwise normally symmetrical traits has been used as a measure of some stresses as well. In this context, we studied how marine pollution affects the valve morphological alterations in the mussel Mytilus galloprovincialis. We used 180 specimens (30 per site) from the aquaculture area of Goro (River Po delta, northern Adriatic Sea), translocated, and released within 50 × 50 × 50 cm cages in five sites: two disturbed and one undisturbed near Naples (eastern Tyrrhenian Sea), and one disturbed and one undisturbed near Siracusa (western Ionian Sea). Disturbed sites were stressed by heavy industrialization and heavy tankers traffic of crude and refined oil, and were defined basing on sediment contamination. In particular, by the cone-beam computed tomography we obtained 3D virtual valve surfaces to be analyzed by the geometric morphometric techniques. Specifically, we focused the levels of the shell shape fluctuating asymmetry in relation to the degrees of marine pollution in different sites of the Tyrrhenian Sea. The Mahalanobis distances (interpreted as proxy of the individual shape asymmetry deviation from the mean asymmetry) significantly regressed with the sediment contamination gradient. Indeed, although the left-right differences were normally distributed in each studied site, the individual asymmetry scores (IAS) significantly varied amongst the investigated sites. IAS showed higher values in disturbed areas than those of undisturbed ones in both Tyrrhenian and Ionian Sea. Our results are consistent with past studies on molluscans and other taxa, demonstrating some detrimental effects of chemicals on organisms, although the investigated morphological marker did not discriminate the real disturbance source. Our findings indicate that the mussels act as a prognostic tool for sea pollution levels driving detrimental effects on benthic community.

Mercury-Pollution Induction of Intracellular Lipid Accumulation and Lysosomal Compartment Amplification in the Benthic Foraminifer Ammonia parkinsoniana

Heavy metals such as mercury (Hg) pose a significant health hazard through bioaccumulation and biomagnification. By penetrating cell membranes, heavy metal ions may lead to pathological conditions. Here we examined the responses of Ammonia parkinsoniana, a benthic foraminiferan, to different concentrations of Hg in the artificial sea water. Confocal images of untreated and treated specimens using fluorescent probes (Nile Red and Acridine Orange) provided an opportunity for visualizing the intracellular lipid accumulation and acidic compartment regulation. With increased Hg over time, we observed an increased number of lipid droplets, which may have acted as a detoxifying organelle where Hg is sequestered and biologically inactivated. Further, Hg seems to promote the proliferation of lysosomes both in terms of number and dimension that, at the highest level of Hg, resulted in cell death. We report, for the first time, the presence of Hg within the foraminiferal cell: at the basal part of pores, in the organic linings of the foramen/septa, and as cytoplasmic accumulations.

Intracellular Isotope Localization in Ammonia sp. (Foraminifera) of Oxygen-Depleted Environments: Results of Nitrate and Sulfate Labeling Experiments

Some benthic foraminiferal species are reportedly capable of nitrate storage and denitrification, however, little is known about nitrate incorporation and subsequent utilization of nitrate within their cell. In this study, we investigated where and how much (15)N or (34)S were assimilated into foraminiferal cells or possible endobionts after incubation with isotopically labeled nitrate and sulfate in dysoxic or anoxic conditions. After 2 weeks of incubation, foraminiferal specimens were fixed and prepared for Transmission Electron Microscopy (TEM) and correlative nanometer-scale secondary ion mass spectrometry (NanoSIMS) analyses. TEM observations revealed that there were characteristic ultrastructural features typically near the cell periphery in the youngest two or three chambers of the foraminifera exposed to anoxic conditions. These structures, which are electron dense and ~200-500 nm in diameter and co-occurred with possible endobionts, were labeled with (15)N originated from (15)N-labeled nitrate under anoxia and were labeled with both (15)N and (34)S under dysoxia. The labeling with (15)N was more apparent in specimens from the dysoxic incubation, suggesting higher foraminiferal activity or increased availability of the label during exposure to oxygen depletion than to anoxia. Our results suggest that the electron dense bodies in Ammonia sp. play a significant role in nitrate incorporation and/or subsequent nitrogen assimilation during exposure to dysoxic to anoxic conditions.

Assessment of the impacts of trace metals on benthic foraminifera in surface sediments from the northwestern Taiwan Strait

The distribution patterns of foraminiferal assemblages in relation to trace metals, sediment grain size, and calcium carbonate were studied in 232 surface sediments collected from the northwestern Taiwan Strait. Multivariate analyses of biotic and abiotic data revealed a separation of near-shore, coastal, and deep-water zones. The modified degree of contamination suggested that the overall contamination was very low to low. Trace metals were enriched in the near-shore and outside bays. Their distribution was likely determined by sediment transport pathways and hydrodynamic conditions. High metal concentrations co-occurred with a low density and diversity of foraminiferal assemblages. Pb, Ba, organic carbon, Ga, Zn, Cu, and Co had a positive correlation with near-shore assemblage, whereas Cr and Ni positively related to the deep-water assemblages. Some calcareous foraminifera were favored by CaCO3, Sr, and sand. This study highlights species' responses that are specific to environmental variables.

Metal-induced malformations in early Palaeozoic plankton are harbingers of mass extinction

Glacial episodes have been linked to Ordovician-Silurian extinction events, but cooling itself may not be solely responsible for these extinctions. Teratological (malformed) assemblages of fossil plankton that correlate precisely with the extinction events can help identify alternate drivers of extinction. Here we show that metal poisoning may have caused these aberrant morphologies during a late Silurian (Pridoli) event. Malformations coincide with a dramatic increase of metals (Fe, Mo, Pb, Mn and As) in the fossils and their host rocks. Metallic toxins are known to cause a teratological response in modern organisms, which is now routinely used as a proxy to assess oceanic metal contamination. Similarly, our study identifies metal-induced teratology as a deep-time, palaeobiological monitor of palaeo-ocean chemistry. The redox-sensitive character of enriched metals supports emerging 'oceanic anoxic event' models. Our data suggest that spreading anoxia and redox cycling of harmful metals was a contributing kill mechanism during these devastating Ordovician-Silurian palaeobiological events.

Marine pollution effects on the southern surf crab Ovalipes trimaculatus (Crustacea: Brachyura: Polybiidae) in Patagonia Argentina

We compared the carapace shape and thickness as well as the energy density of Ovalipes trimaculatus inhabiting areas comprising a gradient of marine pollution: high, moderate and undetected, in the Nuevo gulf (Patagonia Argentina). The carapace shape was evaluated by means of individual asymmetry scores (=fluctuating asymmetry) whereas the carapace thickness was assessed by measuring the carapace dry weight. The energy density was analyzed through its negative relationship with water content in muscle tissue. The individual asymmetry scores as well as the percentage of water content in muscle tissue were proportional to the marine pollution gradient, whereas the carapaces thickness did not differ among sampling sites. Our results are consistent with previous findings and demonstrate the direct effect of marine pollution on other taxa different from gastropods, cephalopods and polyplacophora and add to long-standing concerns about detrimental effects caused by marine pollution on the benthic community of the Nuevo gulf.

Effects of lead pollution on Ammonia parkinsoniana (foraminifera): ultrastructural and microanalytical approaches

The responses of Ammonia parkinsoniana (Foraminifera) exposed to different concentrations of lead (Pb) were evaluated at the cytological level. Foraminifera-bearing sediments were placed in mesocosms that were housed in aquaria each with seawater of a different lead concentration. On the basis of transmission electron microscopy and environmental scanning electron microscopy coupled with energy dispersive spectrometer analyses, it was possible to recognize numerous morphological differences between untreated (i.e., control) and treated (i.e., lead enrichment) specimens. In particular, higher concentrations of this pollutant led to numerical increase of lipid droplets characterized by a more electron-dense core, proliferation of residual bodies, a thickening of the organic lining, mitochondrial degeneration, autophagosome proliferation and the development of inorganic aggregates. All these cytological modifications might be related to the pollutant-induced stress and some of them such as the thickening of organic lining might suggest a potential mechanism of protection adopted by foraminifera.

Distribution of trace metals and the benthic foraminiferal assemblage as a characterization of the environment in the north Minjiang River Estuary (Fujian, China)

A study of the total benthic foraminifera was carried out in 173 surficial sediment samples collected from the north Minjiang River Estuary and two bays. Foraminiferal assemblages are dominated by Ammonia tepida and subordinately by Elphidium advenum. Trace metal analyses reveal that the study area is unpolluted to moderately polluted with As, Cr, Cu, Ni, Pb, and Zn. The metal distribution has an affinity with fine-grained sediment. Five metal groups are recognized based on their distribution patterns: (1) As, Cr, Cu, Ga, Ni, V, and Zn, (2) Hg, Pb, and Sb, (3) Ba and Zr, (4) Rb and Y, and (5) Sr. The species-environment relationship showed that the species composition is adversely influenced by Cr, Cu, Ga, Pb, Rb, Zn, and Zr, whereas sand may exert a positive influence on Quinqueloculina. This study supports the adaptability of using benthic foraminifera as bio-monitors of trace metal pollution in marginal marine environments.

Late Holocene evolution and increasing pollution in Guanabara Bay, Rio de Janeiro, SE Brazil

To detect changes during the Late Holocene and historical periods in Guanabara Bay, the paleoecological and ecological parameters from nine cores were analysed using foraminiferal assemblages and bioindicators. Using radiocarbon dates and sedimentation rates in the cores, it was possible to detect the first Europeans' arrival in the 16th century. Foraminiferal bioindicators of organic matter and human pollution were correlated with radiocarbon dates from the bottom and middle of the cores in each region and revealed an increase in pollution along the cores. The foraminiferal results were compared with total organic carbon (TOC) values before, during and after European settlement and showed a historical increase in organic matter. Pristine mangrove ecosystems are characterised by agglutinated species such as Ammotium salsum, and the presence of this organism also confirmed the extent of historical mangrove forests. Ammonia tepida, Buliminella elegantissima and Elphidium excavatum were the dominant species, but they presented distinct patterns over time. B. elegantissima was dominant before the European influence in older sediments with high organic matter content that were found at deeper intervals. A. tepida is dominant in younger sediments at upper intervals, as a bioindicator of human pollution.

Benthic foraminiferal assemblages and trace metals reveal the environment outside the Pearl River Estuary

We investigated the distribution patterns of the benthic foraminiferal assemblages outside the Pearl River Estuary in relation to trace metals, organic carbon and sedimentary particle fractions. The study area is unpolluted to moderately polluted by Cr, Cu, Pb and Zn and is completely polluted by Ni. The highest levels are found in the western coastal zone. Spatial distributions of the measured elements are strongly related to the behavior of the sedimentary clay fraction. The analyses of species abundance and community diversity as well as subsequent canonical correspondence analysis were used to reveal the relationship between foraminifera data and environmental parameters. Four sampling site groups established by factor analysis were distributed from the coastal area to the inner shelf. Their distribution patterns have a strong correlation with Cu, Pb and Ba. This research shows that benthic foraminifera can be used as bioindicators of trace metal pollutants outside the Pearl River Estuary.

Benthic foraminiferal response to trace element pollution-the case study of the Gulf of Milazzo, NE Sicily (Central Mediterranean Sea)

The response of benthic foraminiferal assemblages to trace element pollution in the marine sediments of the Gulf of Milazzo (north-eastern Sicily) was investigated. Since the 1960s, this coastal area has been a preferred site for the development of two small marinas and a commercial harbour as well as for heavy industry. Forty samples collected in the uppermost 3-4 cm of an undisturbed layer of sediment in the littoral environment were used for this benthic foraminiferal analysis. The enrichment factors (EFs) of selected trace elements (As, Co, Cr, Cu, Mn, Ni, Pb and Zn) were also calculated. Changes both in benthic foraminiferal assemblages and in some trace elements concentrations have provided evidence that the gulf's littoral zone can be subdivided into three sectors characterised by environmental changes in the marine ecosystem. In the sector unpolluted, close to the Milazzo Cape, foraminiferal assemblages exhibit high values of species richness and foraminiferal density while trace element concentrations and their EFs are very low. Here, the highest densities of Miliolids and epiphytic species are present. On the contrary, in the sector polluted, from the marinas to the crude oil refinery, foraminiferal density and species diversity are low, and assemblages are dominated, albeit with very low densities, by species that tolerate stressed environmental conditions, such as LOFAs, agglutinants and Ammonia spp. Here, the highest trace elements concentrations of Pb, Zn and Cu and related EFs were detected. Eastwards, in the sector moderately polluted, foraminiferal populations are quite poor. They are characterised by low values of species richness and foraminiferal densities, nevertheless trace element concentrations become lower than in the other sectors and their EFs are often below 1. Deformed foraminifera, with percentages up to 7.14 %, were found in all three of the sectors. Differences in benthic foraminiferal assemblages, coupled with results from statistical analysis, indicate that anthropogenic trace element pollution could be considered as one of the most important causes of the modifications of foraminiferal assemblages in the study area.

Assessment of the health quality of Ria de Aveiro (Portugal): heavy metals and benthic foraminifera

This work analyses the distribution of heavy metals in the sediments of Ria de Aveiro (Portugal) assessed by total digestion and sequential chemical extraction of the sediments. The influence of environmental parameters on the living benthic foraminiferal assemblages was studied. The most polluted parts in the Ria de Aveiro are areas where the residence time is high and cohesive sediments are deposited. Organic matter, which is an excellent scavenger for a number of metals, is in general more abundant in the finer deposits of this lagoon, which act as sinks of anthropogenic pollutants. This condition is observed in Aveiro canals and Murtosa channel where sediments with the highest concentrations of Zn, Pb, Cu, and Cr are found. The sediments of Murtosa channel are also enriched in As, Co and Hg. In Aveiro canals the enrichment of heavy metals is mostly related to the past industrial production at their margins (ceramic and metallurgy), whereas in Murtosa channel with effluent discharges of the Chemical Complex of Estarreja. Foraminiferal density and diversity reach higher values near the lagoon mouth under higher marine influence and decline in general under very low-oxygen conditions. Some species seems to be indifferent to the increasing of TOC (e.g. Haynesina germanica and Ammonia tepida) and some have an opportunistic behaviour in areas with very depressed levels of oxygen (e.g. A. tepida and Quinqueloculina seminulum) whereas other species can better tolerate sulphide/reducing conditions (e.g. H. germanica, Bolivina ordinaria, Buliminella elegantissima, Bulimina elongata/gibba and Nonionella stella) a widespread condition in this lagoon. Foraminiferal density and some species are negatively correlated with concentrations of heavy metals. A most sensitive group of species to higher concentrations of heavy metals is identified (such as B. ordinaria, B. pseudoplicata and B. elongata/gibba) and another one of more tolerant species (such as H. germanica A. tepida and Q. seminulum). Foraminifera are more tolerate higher available concentrations (AC) of Zn in any phase than higher AC of Cu adsorbed do clay minerals (F1) and associated with Fe and Mn oxides (F2) and of Pb in F2; the phase F2, probably the most mobile phase, and even phase F1 seems to be more toxic than the increasing of metals in organic matter (F3).

Benthic foraminifera distribution in a tourist lagoon in Rio de Janeiro, Brazil: a response to anthropogenic impacts

Rodrigo de Freitas Lagoon, located in the Rio de Janeiro City, receives several types of polluted discharges. The knowledge of the sediment microfauna correlated with heavy metal and organic matter concentrations could supply important data about the conditions of the lagoon. The benthic foraminiferal assemblage presented larger diversity and more abundant samples in the lagoon entrance than in the inner area. The Ammonia tepida - Elphidium excavatum foraminiferal assemblage is characterized by dwarf, corroded and weak organisms. Agglutinated species were found only near the entrance. Low abundance values and sterility of five samples in the inner area (north/northeast) can be caused by high levels of heavy metals and organic matter. A. tepida shows negative correlation with increasing heavy metals values. PAHs and coprostanol high indexes, and the absence or low presence of microfauna in samples around the lagoon margin confirm illegal flows from gas stations and domestic sewage.

Benthic foraminiferal assemblages and trace element contents from the lagoons of Orbetello and Lesina

The Italian marginal areas of Orbetello and Lesina lagoons have been investigated in order to assess the response of benthic foraminifera to the trace element contents in the sediments. The investigated lagoons are deeply affected by high values of trace elements. The lagoon of Orbetello shows the highest values of Cd, Cu, Ni, Pb, Zn, and Hg, whereas the lagoon of Lesina exhibits the highest values of As. On the basis of the trace element contents, both lagoons can be considered from moderately to strongly polluted. Biotic and abiotic factors have been investigated with multivariate technique of statistical analysis. On the basis of the trace element content, the cluster analysis reveals the occurrence of three main clusters. These natural groupings are also confirmed by the principal component analysis. The comparison of trace element concentration patterns with the Foraminiferal Abnormality Index shows a possible influence of these pollutants on the benthic foraminiferal assemblages. Generally, the highest concentrations of trace elements in the investigated areas are remarkably mirrored by the highest percentages of deformed specimens.

Analysis of foraminifera assemblages and sediment geochemical properties to characterise the environment near Araçá and Saco da Capela domestic sewage submarine outfalls of São Sebastião Channel, São Paulo State, Brazil

Superficial bottom samples were collected near diffusers of domestic sewage submarine outfalls at Araçá and Saco da Capela, São Sebastião Channel, Brazil. The goal of this study was to investigate the distribution and composition of live benthic foraminifera assemblages and integrate the results obtained with geochemical analyses to assess human-induced changes. According to the results obtained no environmental stress was observed near the Saco da Capela submarine outfall diffusers. The foraminifera assemblage is characterised by species typical of highly hydrodynamic environments, with well-oxygenated bottom waters and low nutrient contents. In contrast, near Araçá submarine outfall, organic enrichment was denoted by high phosphorus, sulphur and, to a lesser extent, total organic carbon content. Harmful influences on foraminifera could be identified by low richness and specific diversity, as well as the predominance of detritivore feeder species, which are associated with higher organic matter flux and low oxygen in the interstitial pore water.

Benthic foraminifera from two coastal lakes of southern Latium (Italy). Preliminary evaluation of environmental quality

Benthic foraminifera and sediment texture were studied on a total of 37 samples, collected from two brackish-water coastal basins: Fogliano Lake and Lungo Lake (central Italy). The research was performed as a preliminary low-cost survey to highlight the degree of the environmental stress and to recognize a possible anthropogenic disturbance. The sedimentological and foraminiferal data were processed by bivariate and multivariate statistical analysis. Three distinct assemblages, referable to different environments were recognized for the Fogliano Lake: inner, intermediate and outer lagoon. Only the outer lagoon assemblage was found in the Lungo Lake. The distribution of foraminifera in the Fogliano Lake suggests a natural environmental stress probably due to the ecological instability typical of marginal environments, while the absence of the inner and intermediate lagoon assemblages in the Lungo Lake suggests an environmental disturbance possibly related to human activities. An interdisciplinary survey including geochemical analyses is recommended in order to deduce the nature and degree of pollution in the Lungo Lake.

Effects of sudden stress due to heavy metal mercury on benthic foraminifer Rosalina leei: laboratory culture experiment

Laboratory culture experiments were carried out to understand the response of benthic foraminifer Rosalina leei to gradual as well as sudden addition of heavy metal mercury into the media. When mercury was added suddenly, specimens did not show any change in morphology during the initial 40 days. However, later on, out of all the specimens subjected to mercury concentrations up to 150 ng/l, 75% developed deformities, whereas all the specimens subjected to 150-275 ng/l Hg concentrations, had deformed chambers. All specimens kept at 300 ng/l Hg concentration died within 20 days. In addition to this, irregularities were also observed in the rate of reproduction, number of juveniles produced and the survival rate of the juveniles. Where as in an earlier experiment where Hg concentration was increased gradually, irregularities in the newly added chambers were noticed only in case of specimens subjected to very high (180 ng/l) Hg concentration. However, during this experiment, growth was found to be inversely proportional to the mercury concentration.

The impact of easily oxidized material (EOM) on the meiobenthos: foraminifera abnormalities in shrimp ponds of New Caledonia; implications for environment and paleoenvironment survey

This study was carried out in shrimp ponds from New Caledonia, in order to determine the cause of the exceptional proportion of abnormal tests (FAI) (often >50%, sometimes >80%). FAI was positively correlated to the quantity of easily oxidized material (EOM) deposited on the bottom of the ponds and to the sediment oxygen demand, and negatively correlated to redox. These results suggest that a very high FAI is a potential indicator for great accumulations of native organic matter, leading to a high sediment oxygen demand. When studying ancient sediments in core samples, exceptional abundances of abnormal tests may indicate periods of high accumulation of EOM, and therefore of oxygen depletion. This finding should help in better management of aquaculture ponds, but should also allow new insight into the interpretation of sedimentary records, providing a useful proxy for paleoenvironmental reconstructions.

Benthic foraminifera and trace element distribution: a case-study from the heavily polluted lagoon of Venice (Italy)

Living benthic foraminiferal assemblages were studied in surface samples collected from the lagoon of Venice (Italy) in order to investigate the relationship between these sensitive microorganisms and trace element pollution. Geochemical analysis of sediments shows that the lagoon is affected by trace element pollution (Cd, Cu, Ni, Pb, Zn and Hg) with the highest concentrations in its inner part, which corresponds to the Porto Marghera industrial area. The biocenosis are largely dominated by Ammonia tepida, Haynesina germanica and Cribroelphidium oceanensis and, subordinately, by Aubignyna perlucida, Ammonia parkinsoniana and Bolivina striatula. Biotic and abiotic factors were statistically analyzed with multivariate technique of cluster analysis and principal component analysis. The statistical analysis reveals a strong relationship between trace elements (in particular Mn, Pb and Hg) and the occurrence of abnormalities in foraminiferal tests. Remarkably, greater proportions of abnormal specimens are usually found at stations located close to the heaviest polluted industrial zone of Porto Marghera. This paper shows that benthic foraminifera can be used as useful and relatively speedy and inexpensive bio-indicators in monitoring the health quality of the lagoon of Venice. It also provides a basis for future investigations aimed at unraveling the benthic foraminiferal response to human-induced pollution in marine and transitional marine environments.

Benthic foraminifera as bio-indicators of trace element pollution in the heavily contaminated Santa Gilla lagoon (Cagliari, Italy)

In order to assess the response of benthic foraminifera to trace element pollution, a study of benthic foraminiferal assemblages was carried out into sediment samples collected from the Santa Gilla lagoon (Sardinia, Italy). The lagoon has been contaminated by industrial waste, mainly trace elements, as well as by agricultural and domestic effluent. The analysis of surficial sediment shows enrichment in trace elements, including Cr, Cu, Hg, Ni, Pb and Zn. Biotic and abiotic data, analyzed with multivariate techniques of statistical analysis, reveal a distinct separation of both the highly polluted and less polluted sampling sites. The innermost part of the lagoon, comprising the industrial complex at Macchiareddu, is exposed to a high load of trace elements which are probably enhanced by their accumulation in the finer sediment fraction. This area reveals lower diversity and higher percentages of abnormalities when compared to the outermost part of the lagoon.