Diesel uptake by an indigenous microbial consortium isolated from sediments of the Southern Gulf of Mexico: Emulsion characterisation

White Stork Pellets: Non-Invasive Solution to Monitor Anthropogenic Particle Pollution

The present study applied a non-invasive method to analyse anthropogenic particles and prey items in white stork (Ciconia ciconia) pellets. Pellets (n = 20) were obtained from white stork nests during the 2020 breeding season from two sites in Croatia. In total, 7869 anthropogenic particles were isolated. The majority of particles were fragments, while previous studies on other birds often reported fibres. An ATR-FTIR polymer analysis detected glass and construction and building materials, as well as several compounds associated with plastic masses. Polymer investigation revealed the presence of dotriacontane and octacosane, which are by-products of polyethylene (PE) degradation and transformation. Additionally, the detection of vinylidene chloride (VDC) highlights the historical contribution of polyvinylidene chloride (PVDC) to plastic pollution. Significant variation in particle quantity and size between the sampling sites was detected, with larger particles found at sites associated with the metal mechanical engineering industry and agriculture. Prey assessment revealed chitin remains of large insects such as Orthoptera and Coleoptera. This research confirms the potential of pellet analysis as a valuable tool for assessing the presence of anthropogenic particles in the environment. However, further research is needed to fully understand the extent of particle ingestion, particle sources and potential impact.

Continuous bioreactors enable high-level bioremediation of diesel-contaminated seawater at low and mesophilic temperatures using Antarctic bacterial consortia: Pollutant analysis and microbial community composition

In 2020, more than 21,000 tons of diesel oil were released accidently into the environment with most of it contaminating water bodies. There is an urgent need for sustainable technologies to clean up rivers and oceans to protect wildlife and human health. One solution is harnessing the power of bacterial consortia; however isolated microbes from different environments have shown low diesel bioremediation rates in seawater thus far. An outstanding question is whether Antarctic microorganisms that thrive in environments polluted with hydrocarbons exhibit better diesel degrading activities when propagated at higher temperatures than those encountered in their natural ecosystems. Here, we isolated bacterial consortia, LR-30 (30 °C) and LR-10 (10 °C), from the Antarctic rhizosphere soil of Deschampsia antarctica (Livingston Island), that used diesel oil as the only carbon substrate. We found that LR-30 and LR-10 batch bioreactors metabolized nearly the entire diesel content when the initial concentration was 10 (g/L) in seawater. Increasing the initial diesel concentration to 50 gDiesel/L, LR-30 and LR-10 bioconverted 33.4 and 31.2 gDiesel/L in 7 days, respectively. The 16S rRNA gene sequencing profiles revealed that the dominant bacterial genera of the inoculated LR-30 community were Achromobacter (50.6%), Pseudomonas (25%) and Rhodanobacter (14.9%), whereas for LR-10 were Pseudomonas (58%), Candidimonas (10.3%) and Renibacterium (7.8%). We also established continuous bioreactors for diesel biodegradation where LR-30 bioremediated diesel at an unprecedent rate of (34.4 g/L per day), while LR-10 achieved (24.5 g/L per day) at 10 °C for one month. The abundance of each bacterial genera present significantly fluctuated at some point during the diesel bioremediation process, yet Achromobacter and Pseudomonas were the most abundant member at the end of the batch and continuous bioreactors for LR-30 and LR-10, respectively.

Impact of Microbial Uptake on the Nutrient Plume around Marine Organic Particles: High-Resolution Numerical Analysis

The interactions between marine bacteria and particulate matter play a pivotal role in the biogeochemical cycles of carbon and associated inorganic elements in the oceans. Eutrophic plumes typically form around nutrient-releasing particles and host intense bacterial activities. However, the potential of bacteria to reshape the nutrient plumes remains largely unexplored. We present a high-resolution numerical analysis for the impacts of nutrient uptake by free-living bacteria on the pattern of dissolution around slow-moving particles. At the single-particle level, the nutrient field is parameterized by the Péclet and Damköhler numbers (0 < Pe < 1000, 0 < Da < 10) that quantify the relative contribution of advection, diffusion and uptake to nutrient transport. In spite of reducing the extent of the nutrient plume in the wake of the particle, bacterial uptake enhances the rates of particle dissolution and nutrient depletion. These effects are amplified when the uptake timescale is shorter than the plume lifetime (Pe/Da < 100, Da > 0.0001), while otherwise they are suppressed by advection or diffusion. Our analysis suggests that the quenching of eutrophic plumes is significant for individual phytoplankton cells, as well as marine aggregates with sizes ranging from 0.1 mm to 10 mm and sinking velocities up to 40 m per day. This microscale process has a large potential impact on microbial growth dynamics and nutrient cycling in marine ecosystems.

Bubble Column Bioreactor using native non-genetically modified organisms: a remediation alternative by hydrocarbon-polluted water from the Gulf of Mexico

Notwithstanding the benefits that oil provides as a source of energy, society also recognizes the environmental problems caused by its use. We evaluated eight coastal sites in the central area of the Gulf of Mexico. At these sites, 14 hydrocarbons were detected which belong to compounds formed by carbons ranging from C9 to C27. The hydrocarbons with the highest concentrations were n-nonane (3.07 ± 1.60 mg L−1), carbazole (0.93 ± 0.12 mg L−1) and benzo [a] pyrene (1.33 ± 0.71 mg L−1). The hydrocarbons found belong mostly to medium fraction hydrocarbons, which are mostly found in fuels such as diesel. Therefore, this fuel was used as a carbon source or substrate in bubble column bioreactors. The capacity of non-genetically modified organisms to degrade microbial hydrocarbons was evaluated using a mineral medium for a period of 14 days. Suspended solids increased from 0.8 to 2.94 g L−1. Diesel consumption was achieved in 12 days of operation.

Oil Spill Modeling: A Critical Review on Current Trends, Perspectives, and Challenges

Several oil spill simulation models exist in the literature, which are used worldwide to simulate the evolution of an oil slick created from marine traffic, petroleum production, or other sources. These models may range from simple parametric calculations to advanced, new-generation, operational, three-dimensional numerical models, coupled to meteorological, hydrodynamic, and wave models, forecasting in high-resolution and with high precision the transport and fate of oil. This study presents a review of the transport and oil weathering processes and their parameterization and critically examines eighteen state-of-the-art oil spill models in terms of their capacity (a) to simulate these processes, (b) to consider oil released from surface or submerged sources, (c) to assimilate real-time field data for model initiation and forcing, and (d) to assess uncertainty in the produced predictions. Based on our review, the most common oil weathering processes involved are spreading, advection, diffusion, evaporation, emulsification, and dispersion. The majority of existing oil spill models do not consider significant physical processes, such as oil dissolution, photo-oxidation, biodegradation, and vertical mixing. Moreover, timely response to oil spills is lacking in the new generation of oil spill models. Further improvements in oil spill modeling should emphasize more comprehensive parametrization of oil dissolution, biodegradation, entrainment, and prediction of oil particles size distribution following wave action and well blow outs.

Bioreactors for the remediation of hydrocarbon-polluted water of the Bitzal River, a place of environmental emergency due to the death of manatees

The objectives of this research are: identify the hydrocarbons in water from the Bitzal River, Tabasco; select a carbon source that serves as a representative substrate of the determined compounds; and finally, design an experimental proposal for bioreactors that are capable of consuming compounds formed by complex mixtures and, therefore be effective in the elimination of specific hydrocarbons. We identified 16 compounds that belong to different hydrocarbon fractions. Pentacene (24.3 ± 0.09 mg L^-1), n-nonane (2.11 ± 0.96 mg L^-1) and benzo [a] pyrene (1.39 ± 0.57 mg L^-1) were the compounds with the highest concentrations in water. Two culture media, mineral medium and seawater were used. Diesel and Mayan crude oil were used for each culture medium, with a total of four bioreactors. Diesel represented light- and medium-fraction hydrocarbons, while Mayan crude oil represented the heavy fraction as well as the recalcitrant and polycyclic aromatic hydrocarbons (PAH). The maximum growth of suspended solids for diesel in mineral medium reached 2.95 g L^-1, and diesel was completely consumed in 8 days. In seawater, suspended solids for diesel reached 2.70 g L^-1, and diesel was consumed in 12 days. For Mayan crude oil in mineral medium, suspended solids increased from 0.8 to 2.41 g L^-1, and Mayan crude oil was completely consumed in 12 days. Using seawater, Mayan crude oil also degraded in 12 days, and suspended solids growth reached 2.11 g L^-1. Compounds that simulate complex mixtures of hydrocarbons from light to heavy fractions could be degraded, and the use of bioreactors is an alternative method of hydrocarbon pollution remediation in the Bitzal River.

Uptake and detoxification of diesel oil by a tropical soil Actinomycete Gordonia amicalis HS-11: Cellular responses and degradation perspectives

A tropical soil Actinomycete, Gordonia amicalis HS-11, has been previously demonstrated to degrade unsaturated and saturated hydrocarbons (squalene and n-hexadecane, respectively) in an effective manner. In present study, G. amicalis HS-11 degraded 92.85 ± 3.42% of the provided diesel oil [1% (v/v)] after 16 days of aerobic incubation. The effect of different culture conditions such as carbon source, nitrogen source, pH, temperature, and aeration on degradation was studied. During degradation, this Actinomycete synthesized surface active compounds (SACs) in an extracellular manner that brought about a reduction in surface tension from 69 ± 2.1 to 30 ± 1.1 mN m^-1 after 16 days. The morphology of cells grown on diesel was monitored by using a Field Emission Scanning Electron Microscope. Diesel-grown cells were longer and clumped with smooth surfaces, possibly due to the secretion of SACs. The interaction between the cells and diesel oil was studied by Confocal Laser Scanning Microscope. Some cells were adherent on small diesel droplets and others were present in the non-attached form thus confirming the emulsification ability of this organism. The fatty acid profiles of the organism grown on diesel oil for 48 h were different from those on Luria Bertani Broth. The genotoxicity and cytotoxicity of diesel oil before and after degradation were determined. Cytogenetic parameters such as mitotic index (MI); mitosis distribution and chromosomal aberration (type and frequency) were assessed. Oxidative stress was evaluated by measuring levels of catalase, superoxide dismutase and concentration of malondialdehyde. On the basis of these studies it was deduced that the degradation metabolites were relatively non-toxic.

Baseline for plastic and hydrocarbon pollution of rivers, reefs, and sediment on beaches in Veracruz State, México, and a proposal for bioremediation

Plastic and hydrocarbon pollution in aquatic ecosystems is a worldwide reality and serious concern today. Plastic debris presents a threat to ecosystems and organisms. Hydrocarbons are also considered priority pollutants. The hydrophobicity of the polymer in combination with the high surface area causes plastics to act as a vector for organic contaminants such as hydrocarbons. The first aim of this work was to evaluate the presence of plastic and hydrocarbon pollution in water from two reefs and two rivers and to identify plastic in six sediment beaches in Veracruz State, Mexico. In addition, the second aim was to analyse the ability of a bacterial consortium to biodegrade hydrocarbons in an airlift bioreactor and to identify degrading bacterial strains of polyethylene terephthalate (PET). Microplastics (100 nm-5 mm) were found in four water samples. Fragments of plastic collected from the reefs ranged in size from 0.716 to 32 μm and in rivers from 0.833 to 784 μm. On the sediment beaches, macroplastics of sizes 2-10 cm were detected. A number of hydrocarbons were also detected in the water samples of both reefs and one river, including n-octane, n-nonane, phenanthrene, n-eicosane, n-dotriacontane, n-hexatriacontane, n-triacontane, and n-tetratriacontane. As a biotechnological alternative for remediation of hydrocarbons and plastics, we attempted to produce a collection of native microorganisms able to degrade them. This work shows results from the bioprospection of a bacterial consortium (Xanthomonas, Acinetobacter bouvetii, Shewanella, and Aquamicrobium lusatiense) for hydrocarbon biodegradation in an airlift bioreactor. The tested consortium was able to successfully degrade the maximum diesel concentration (20 g L^-1) tested for 10 days. Also, the first visual evidence of PET degradation by an isolated forest-native bacterial strain showed that Bacillus muralis is the most efficient degrader.

Systematic degradation mechanism and pathways analysis of the immobilized bacteria: Permeability and biodegradation, kinetic and molecular simulation

In order to effectively improve the degradation rate of diesel, a systematic analysis of the degradation mechanism used by immobilized bacteria is necessary. In the present study, diesel degradation mechanisms were assessed by analyzing permeability, biodegradation, adsorption kinetics, and molecular simulation. We found that bacteria immobilized on cinnamon shells and peanut shells degraded relatively high amounts of diesel (69.94% and 64.41%, respectively). The primary degradation pathways used by immobilized bacteria included surface adsorption, internal uptake, and biodegradation. Surface adsorption was dominant in the early stage of degradation, whereas biodegradation was dominant in later stages. The diesel adsorption rate of the immobilized bacteria was in agreement with the pseudo second-order kinetic model. The immobilized bacteria and diesel interacted through hydrogen bonds.