Nanovesicle and extracellular polymeric substance synthesis from the remediation of heavy metal ions from soil

Co-exposure to cyazofamid and polymyxin E: Variations in microbial community and antibiotic resistance in the soil-animal-plant system

Human activity is accelerating the emergence of fungal pathogens, prompting substantial efforts to discover novel fungicides. Meanwhile, the runoff and spray drift from agricultural fields adversely affect aquatic and terrestrial nontarget organisms. However, few studies have examined the effects of co-contamination by agrochemical fungicides and pharmaceutical antibiotics on microorganisms and antibiotic resistance genes (ARGs) in the soil-animal-plant system. To further explore the mechanisms, an investigation was conducted into the individual and combined effects of a widely used fungicide (cyazofamid, CZF) and a last-resort antibiotic (colistin, polymyxin E, PME) in the soil-earthworm-tomato system. This study revealed that CZF and PME co-contamination exerted synergistic toxicity, significantly reducing earthworm survival and inhibiting tomato growth. This study found that the structure of microbial communities was more severely disturbed by the fungicide CZF than by the antibiotic PME, with the most severe impact being that of CZF + PME co-contamination. Fungicides and antibiotics had significantly distinct effects on bacterial functional pathways: CZF and CZF + PME treatments enhanced compound degradation, whereas PME treatments promoted biological nitrogen cycling. Moreover, co-contamination significantly increased the abundance of insertional and plasmid-associated genes and number of total ARGs in bulk and rhizosphere soil. In addition, the relationships between bacterial communities and the antibiotic resistome were investigated. The analysis revealed that Gram-positive bacteria (Sporosarcina, Bacillus, and Rhodococcus) capable of resistance and degradation, as well as the genes MexB (multidrug) and aadA2 (aminoglycoside) were enriched. Taken together, interactions between co-pollutants can significantly increase toxicity levels and the risk of ARG proliferation. The findings provide new insights into the potential impacts of co-contamination in complex real-life environments, such as soil-animal-plant systems.

Enhancing the Phytoremediation of Heavy Metals by Plant Growth Promoting Rhizobacteria (PGPR) Consortium: A Narrative Review

Heavy metal pollution has become a significant concern as the world continues to industrialize, urbanize, and modernize. Heavy metal pollutants impede the growth and metabolism of plants. The bioaccumulation of heavy metals in plants may create chlorophyll antagonism, oxidative stress, underdeveloped plant growth, and reduced photosynthetic system. Finding practical solutions to protect the environment and plants from the toxic effects of heavy metals is essential for long-term sustainable development. The direct use of suitable living plants for eliminating and degrading metal pollutants from ecosystems is known as phytoremediation. Phytoremediation is a novel and promising way to remove toxic heavy metals. Plant growth-promoting rhizobacteria (PGPR) can colonize plant roots and help promote their growth. Numerous variables, such as plant biomass yield, resistance to metal toxicity, and heavy metal solubility in the soil, affect the rate of phytoremediation. Phytoremediation using the PGPR consortium can speed up the process and increase the rate of heavy metal detoxification. The PGPR consortium has significantly increased the biological accumulation of various nutrients and heavy metals. This review sheds light on the mechanisms that allow plants to uptake and sequester toxic heavy metals to improve soil detoxification. The present review aids the understanding of eco-physiological mechanisms that drive plant-microbe interactions in the heavy metal-stressed environment.

The Combination of α-Fe2O3 NP and Trichoderma sp. Improves Antifungal Activity Against Fusarium Wilt

Soil-borne plant pathogens are the most damaging pathogens responsible for severe crop damage. A conventional chemotherapy approach to these pathogens has numerous environmental issues, while biological control agents (BCAs) are less promising under field conditions. There is an immediate need to develop an integrated strategy for utilizing nanoparticles and biocontrol to manage soil-borne pathogens, such as Fusarium wilt, effectively. Simulation of BCA metabolites to nanoparticle biocontrol metabolites is considered the most effective biocontrol approach. Combining Fe2O3 nanoparticles and Trichoderma in nursery and field conditions manages pathogens and increases plant growth characteristics. The present study evaluated the commercial biocontrol strains and the use of NPFe in combination with Trichoderma harzianum to enhance the biocontrol potential of T. harzianum against soil-borne pathogens. The effectiveness of (NPFe + T. harzianum) was evaluated under in vitro conditions where combination was found most effective upto (87.63%) mycelial growth inhibition of pathogen and under field conditions lowest pooled Fusarium wilt incidence (19.54%) was recorded. Nanocomposites are beneficial for agricultural sustainability and environmental safety by upregulating the expression of genes linked to these processes, Fe NPs can activate plant defense mechanisms and increase plant resistance to pathogenic invasions. Additionally, as iron is a necessary component for plant growth and development, Fe NPs promote better nutrient uptake.

Copper and zinc removal from anaerobic digestates via Sporosarcina pasteurii induced precipitation: Effect of volatile fatty acids on process performance

Microbial induced carbonate precipitation (MICP) shows great potential for metals recovery from secondary sources, which is vital for circular economy. This study explores the feasibility of using Sporosarcina pasteurii for MICP to recover copper (Cu) and zinc (Zn) from acidogenic anaerobic digestates at laboratory scale. Pre-cultured S. pasteurii was inoculated into solutions containing 20 g L-1 of urea and varying concentrations of Cu and Zn (0-25 mg L-1). The system was maintained at 30 °C with continuous agitation for seven days to assess Cu and Zn removal at initial pH values of 5, 6 and 7. The influence of volatile fatty acids (VFAs) on urea hydrolysis and Cu and Zn removal via S. pasteurii-induced MICP was evaluated by adding 3 g COD L-1 of acetic and propionic acids to metal solutions. Results showed that S. pasteurii enhanced Cu and Zn removal, with yields varying from 22% to 100% depending on the initial pH. In the presence of VFAs, Cu and Zn removal was significantly reduced (p < 0.05), however, only S. pasteurii-incubated samples exhibited Cu and Zn removal, indicating exclusive biological-driven removal. The primary mechanisms of action inferred for Cu and Zn removal in VFAs-spiked samples involved urea hydrolysis, which increased local pH and facilitated metals precipitation, as well as the adsorption of metal ions onto the negatively charged S. pasteurii cell wall. This study demonstrates the potential of S. pasteurii to enhance Cu and Zn removal from VFAs-containing media paving the way for a sustainable metals recovery alternative from waste streams.

Endophytic fungi: nature's solution for antimicrobial resistance and sustainable agriculture

The growing threat of antimicrobial resistance (AMR) has underlined the need for a sustained supply of novel antimicrobial agents. Endophyte microorganism that reside within plant tissues as symbionts have been the source of potential antimicrobial substances. However, many novel and potent antimicrobials are yet to be discovered from these endophytes. The present study investigates the potential of endophytic fungi as a source of novel bioactive chemicals with antibacterial capabilities. These fungi synthesize secondary metabolites such as polyketides and peptides via polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) pathways. Notable substances, like prenylated indole alkaloids and fumaric acid, have shown promising antibacterial and antifungal properties against multidrug-resistant infectious agents. This review also emphasizes the symbiotic link between endophytes and their host plants, which is critical for secondary metabolite production. The study focuses on the significance of isolation methods for endophytes and proposes their use in for sustainable agriculture, bioremediation, and medicine. Future research combining endophytic biodiversity analysis with next-generation sequencing (NGS) and nanotechnology could provide novel techniques for combating AMR and contributing to sustainability across multiple industries.

Enhancing Agricultural Sustainability Through Rhizomicrobiome: A Review

Sustainable agriculture represents the responsible utilization of natural resources while safeguarding the well-being of the natural environment. It encompasses the objectives of preserving the environment, fostering economic growth, and promoting socioeconomic equality. To achieve sustainable development for humanity, it is imperative to prioritize sustainable agriculture. One significant approach to achieving this transition is the extensive utilization of microbes, which play a crucial role due to the genetic reliance of plants on the beneficial functions provided by symbiotic microbes. This review focuses on the significance of rhizospheric microbial communities, also known as the rhizomicrobiome (RM). It is a complex community of microorganisms that live in the rhizosphere and influence the plant's growth and health. It provides its host plant with various benefits related to plant growth, including biocontrol, biofertilization, phytostimulation, rhizoremediation, stress resistance, and other advantageous properties. Yet, the mechanisms by which the RM contributes to sustainable agriculture remain largely unknown. Investigating this microbial population presents a significant opportunity to advance toward sustainable agriculture. Hence, this study aims to provide an overview of the diversity and applications of RM in sustainable agriculture practices. Lately, there has been growing momentum in various areas related to rhizobiome research and its application in agriculture. This includes rhizosphere engineering, synthetic microbiome application, agent-based modeling of the rhizobiome, and metagenomic studies. So, developing bioformulations of these beneficial microorganisms that support plant growth could serve as a promising solution for future strategies aimed at achieving a new green revolution.

Cyanobacterial Silver Nanoparticles and Their Potential Utility-Recent Progress and Prospects: A Review

The current situation involves an increase in interest in nanotechnology, in particular the ways in which it can be applied in the commercial and medical fields. However, traditional methods of synthesizing nanoparticles have some drawbacks, including the generation of harmful byproducts, high energy consumption, and cost. As a result, researchers have shifted their focus to "green" nanoparticle synthesis to circumvent these drawbacks. Because of their exceptional physiochemical properties, silver nanoparticles (Ag Nps) are the noble metal nanoparticles that are used most frequently. The green approach to Ag NP synthesis is environmentally friendly, non-toxic, and cost-effective, and it makes use of a variety of biological entities. Cyanobacteria, in particular, have garnered the most attention because of the abundance of bioactive substances that they contain, which serve both as reducing agents and as stabilizing agents during the process of biosynthesis. This review article discusses the current state of cyanobacteria-mediated Ag NP synthesis, the potential mechanisms that are involved, nanoparticle characterization, the various applications of Ag NP in different fields, and their prospects.

Endophytic Colletotrichum fructicola KL19 and Its Derived SeNPs Mitigate Cd-Stress-Associated Damages in Spinacia oleracea L

The application of nanotechnology in agriculture has received much attention in order to improve crop yield, quality and food safety. In the present study, a Cd-tolerant endophytic fungus Colletotrichum fructicola KL19 was first ever reported to produce SeNPs, and the production conditions were optimized using the Box-Behnken design in the Response Surface Methodology (RSM-BBD), achieving a peak yield of 1.06 mM under optimal conditions of 2.62 g/20 mL biomass, 4.56 mM Na2SeO3, and pH 6.25. Following this, the properties of the biogenic SeNPs were elucidated by using TEM, DLS, and FTIR, in which the 144.8 nm spherical-shaped SeNPs were stabilized by different functional groups with a negative zeta potential of -18.3 mV. Furthermore, strain KL19 and SeNPs (0, 5, 10, 20 and 50 mg/L) were inoculated in the root zone of small-leaf spinach (Spinacia oleracea L.) seedlings grown in the soil with 33.74 mg/kg Cd under controlled conditions for seven weeks. Impressively, compared with Cd stress alone, the strain KL19 and 5 mg/L SeNPs treatments significantly (p < 0.05) exhibited a reduction in Cd contents (0.62 and 0.50 folds) within the aboveground parts of spinach plants and promoted plants' growth by improving the leaf count (0.92 and 1.36 folds), fresh weight (2.94 and 3.46 folds), root dry weight (4.00 and 5.60 folds) and root length (0.14 and 0.51 folds), boosting total chlorophyll synthesis (0.38 and 0.45 folds), enhancing antioxidant enzymes (SOD, POD) activities, and reducing the contents of reactive oxygen species (MDA, H2O2) in small-leaf spinach under Cd stress. Overall, this study revealed that utilizing endophytic fungus C. fructicola or its derived SeNPs could mitigate reactive oxygen species generation by enhancing antioxidant enzyme activity as well as diminish the absorption and accumulation of Cd in small-leaf spinach, promoting plant growth under Cd stress.

The effect of quorum sensing on cadmium- and lead-containing wastewater treatment using activated sludge: Removal efficiency, enzyme activity, and microbial community

Quorum sensing (QS) is prevalent in activated sludge processes; however, its essential role in the treatment of heavy metal wastewater has rarely been studied. Therefore, in this study, acyl homoserine lactone (AHL)-mediated QS was used to regulate the removal performance, enzyme activity, and microbial community of Cd- and Pb-containing wastewater in a sequencing batch reactor (SBR) over 30 cycles. The results showed that exogenous AHL strengthened the removal of Cd(II) and Pb(II) in their coexistence wastewater during the entire period. The removal of NH4+-N, total phosphorus, and chemical oxygen demand (COD) was also enhanced by the addition of AHL despite the coexistence of Cd(II) and Pb(II). Meanwhile, the protein content of extracellular polymeric substances was elevated and the microbial metabolism and antioxidative response were stimulated by the addition of AHL, which was beneficial for resistance to heavy metal stress and promoted pollutant removal by activated sludge. Microbial sequencing indicated that AHL optimized the microbial community structure, with the abundance of dominant taxa Proteobacteria and Unclassified_f_Enterobacteriaceae increasing by 73.9% and 59.2% maximally, respectively. This study offers valuable insights into the mechanisms underlying Cd(II) and Pb(II) removal as well as microbial community succession under AHL availability in industrial wastewater.

Antimony precipitation and removal by antimony hyper resistant strain Achromobacter sp. 25-M

Microbes have been confirmed to play key role in biogeochemistry of antimony. However, the impact of indigenous bacteria (from active mines) on the behavior of dissolved antimony remained poorly understood. In current study, the hyper antimony-resistant strain, Achromobacter sp. 25-M, isolated from the world largest antimony deposit, Xikuangshan antimony deposit, was evaluated for its role in dissolved Sb(V) and Sb(III) precipitation and removal. Despite of the high resistance to Sb(III) (up to 50 mM), the facultative alkaliphile, 25-M was not capable of Sb(III) oxidation. Meanwhile 25-M can produce high amount of exopolymeric substance (EPS) with the presence of Sb, which prompted us to investigate the potential role of EPS in the precipitation and removal of Sb. To this end, 2 mM of Sb(III) and Sb(V) were added into the experimental systems with and without 25-M to discern the interaction mechanism between microbe and antimony. After 96 hrs' incubation, 88% [1.73 mM (210 mg/L)] of dissolved Sb(V) and 80% [1.57 mM (190 mg/L)] of dissolved Sb(III) were removed. X-ray diffraction and energy dispersive spectroscopy analysis confirmed the formation of valentinite (Sb2O3) in Sb(III) amended system and a solitary Sb(V) mineral mopungite [NaSb(OH)6] in Sb(V) amended group with microbes. Conversely, no precipitate was detected in abiotic systems. Morphologically valentinite was bowtie and mopungite was pseudo-cubic as indicated by scanning electronic microscopy. EPS was subjected to fourier transform infrared (FT-IR) analysis. FT-IR analysis suggested that -OH and -COO groups were responsible for the complexation and ligand exchange with Sb(III) and Sb(V), respectively. Additionally, the C-H group and N-H group could be involved in π-π interaction and chelation with Sb species. All these interactions between Sb and functional groups in EPS may subsequently favore the formation of valentinite and mopungite. Collectively, current results suggested that EPS play fundamental role in bioprecipitation of Sb, which offered a new strategy in Sb bioremediation.

Microscopic deposition-property relationships in microbial-induced consolidation of coal dusts

In recent years, the preparation of new microbial dust suppressants based on microbial induced carbonate precipitation (MICP) technology through enriched urease-producing microbial communities has become a new topic in the field of coal dust control. The deposition of CaCO3 was the key to suppress coal dust. However, deposition characteristics in the field is not sufficient and the relationship between deposition characteristics and erosion resistance is not clear, which hinders the development of engineering application of new microbial dust suppressant. Therefore, based on X-CT technology, this paper observed and quantified micro-deposition of bio-consolidated coal dust with different calcium sources. Furthermore, a conceptual framework for deposition was proposed and its correlation with erosion resistance was revealed. The results showed that CaCO3 induced by calcium chloride and calcium lactate was aggregate deposited. Aggregate deposited CaCO3 was small in volume, showed the distribution of aggregation in the central area and loose outside, and mosaiced pores. CaCO3 induced by calcium nitrate was surface deposition due to attached biomass. Surface deposition was mostly large volume CaCO3 expanding from the inside out, which could cover coal dust to a high degree and completely cemented pores. In addition, the threshold detachment velocity of coal dust cemented by surface deposition was increased by 17.6-19.1% compared to aggregate deposition. This depended on the abundance and strength of CaCO3 bonding between coal dust particles under different deposition. The two-factor model based on porosity and CaCO3 coverage can well express relationship between erosion resistance and depositional characteristics. Those results will help the engineering application of MICP technology in coal dust suppression.

Mechanism and application of modified bioelectrochemical system anodes made of carbon nanomaterial for the removal of heavy metals from soil

Bioelectrochemical techniques are quick, efficient, and sustainable alternatives for treating heavy metal soils. The use of carbon nanomaterials in combination with electroactive microorganisms can create a conductive network that mediates long-distance electron transfer in an electrode system, thereby resolving the issue of low electron transfer efficiency in soil remediation. As a multifunctional soil heavy metal remediation technology, its application in organic remediation has matured, and numerous studies have demonstrated its potential for soil heavy metal remediation. This is a ground-breaking method for remediating soils polluted with high concentrations of heavy metals using soil microbial electrochemistry. This review summarizes the use of bioelectrochemical systems with modified anode materials for the remediation of soils with high heavy metal concentrations by discussing the mass-transfer mechanism of electrochemically active microorganisms in bioelectrochemical systems, focusing on the suitability of carbon nanomaterials and acidophilic bacteria. Finally, we discuss the emerging limitations of bioelectrochemical systems, and future research efforts to improve their performance and facilitate practical applications. The mass-transfer mechanism of electrochemically active microorganisms in bioelectrochemical systems emphasizes the suitability of carbon nanomaterials and acidophilic bacteria for remediating soils polluted with high concentrations of heavy metals. We conclude by discussing present and future research initiatives for bioelectrochemical systems to enhance their performance and facilitate practical applications. As a result, this study can close any gaps in the development of bioelectrochemical systems and guide their practical application in remediating heavy-metal-contaminated soils.

Sunlight-driven intimately coupled photocatalysis and biodegradation (SDICPB): A sustainable approach for enhanced detoxification of triclosan

Triclosan is considered as recalcitrant contaminant difficult to degrade from the contaminated wastewater. Thus, promising, and sustainable treatment method is necessary to remove triclosan from the wastewater. Intimately coupled photocatalysis and biodegradation (ICPB) is an emerging, low-cost, efficient, and eco-friendly method for the removal of recalcitrant pollutants. In this study BiOI photocatalyst coated bacterial biofilm developed at carbon felt for efficient degradation and mineralization of triclosan was studied. Based on the characterization of BiOI prepared using methanol had lower band gap 1.85 eV which favors lower recombination of electron-hole pair and higher charge separation which ascribed to enhanced photocatalytic activity. ICPB exhibits 89% of triclosan degradation under direct sunlight exposure. The results showed that production of reactive oxygen species hydroxyl radical and superoxide radical anion played crucial role in the degradation of triclosan into biodegradable metabolites further the bacterial communities mineralized the biodegradable metabolites into water and carbon dioxide. The confocal laser scanning electron microscope results emphasized that interior of the biocarrier shows a large number of live bacterial cells existing in the photocatalyst-coated carrier, where the little toxic effect on bacterial biofilm occurred on the exterior of the carrier. The extracellular polymeric substances characterization result remarkable confirms that which could act as sacrificial agent of photoholes further helped by preventing the toxicity to the bacterial biofilm from the reactive oxygen species and triclosan. Hence, this promising approach can be a possible alternative method for the wastewater treatment polluted with triclosan.

Effect and mechanism of simultaneous cadmium-tetracycline removal by a self-assembled microbial-photocatalytic coupling system

Electrochemical bacteria Shewanella oneidensis MR-4 (MR-4) was used to biologically generate cadmium sulfide (bio-CdS) nanocrystals and construct a self-assembled intimately coupled photocatalysis-biodegradation system (SA-ICPB) to remove cadmium (Cd) and tetracycline hydrochloride (TCH) from wastewater. The characterization using EDS, TEM, XRD, XPS, and UV-vis confirmed the successful CdS bio-synthesis and its visible-light response capacity (520 nm). 98.4% of Cd²⁺ (2 mM) was removed during bio-CdS generation within 30 min. The electrochemical analysis confirmed the photoelectric response capability of the bio-CdS as well as its photocatalytic efficiency. Under visible light, SA-ICPB entirely eliminated TCH (30 mg/L). In 2 h, 87.2% and 43.0% of TCH were removed separately with and without oxygen. 55.7% more chemical oxygen demand (COD) was removed with oxygen participation, indicating the degradation intermediates elimination by SA-ICPB required oxygen participation. Biodegradation dominated the process under aerobic circumstances. Electron paramagnetic resonance analysis indicated that h⁺ and ·O₂^- played a decisive role in photocatalytic degradation. Mass spectrometry analysis proved that TCH was dehydrated, dealkylated, and ring-opened before mineralizing. In conclusion, MR-4 can spontaneously generate SA-ICPB and rapidly-deeply eliminate antibiotics by coupling photocatalytic and microbial degradation. Such an approach was efficient for the deep degradation of persistent organic pollutants with antimicrobial properties.

Thallium-mediated NO signaling induced lipid accumulation in microalgae and its role in heavy metal bioremediation

Thallium (Tl⁺) is a trace metal with extreme toxicity and is highly soluble in water, posing a great risk to ecological and human safety. This work aimed to investigate the role played by Tl⁺ in regulating lipid accumulation in microalgae and the removal efficiency of Tl⁺. The effect of Tl⁺ on the cell growth, lipid production and Tl⁺ removal efficiency of Parachlorella kessleri R-3 was studied. Low concentrations of Tl⁺ had no significant effect on the biomass of microalgae. When the Tl⁺ concentration exceeded 5 μg L^-1, the biomass of microalgae showed significant decrease. The highest lipid content of 63.65% and lipid productivity of 334.55 mg L^-1 d^-1 were obtained in microalgae treated with 10 and 5 μg L^-1 Tl⁺, respectively. Microalgae can efficiently remove Tl⁺ and the Tl⁺ removal efficiency can reach 100% at Tl⁺ concentrations of 0-25 μg L^-1. The maximum nitric oxide (NO) level of 470.48 fluorescence intensity (1 × 10⁶ cells)^-1 and glutathione (GSH) content of 343.51 nmol g^-1 (fresh alga) were obtained under 5 μg L^-1 Tl⁺ stress conditions. Furthermore, the exogenous donor sodium nitroprusside (SNP) supplemented with NO was induced in microalgae to obtain a high lipid content (59.99%), lipid productivity (397.99 mg L^-1 d^-1) and GSH content (430.22 nmol g^-1 (fresh alga)). The corresponding analysis results indicated that NO could participate in the signal transduction pathway through modulation of reactive oxygen species (ROS) signaling to activate the antioxidant system by increasing the GSH content to eliminate oxidative damage induced by Tl⁺ stress. In addition, NO regulation of ROS signaling may enhance transcription factors associated with lipid synthesis, which stimulates the expression of genes related to lipid synthesis, leading to increased lipid biosynthesis in microalgae. Moreover, it was found that the change in Tl⁺ had little effect on the fatty acid components and biodiesel properties. This study showed that Tl⁺ stress can promote lipid accumulation in microalgae for biodiesel production and simultaneously effectively remove Tl⁺, which provided evidence that NO was involved in signal transduction and antioxidant defense, and improved the understanding of the interrelation between NO and ROS to regulate lipid accumulation in microalgae.