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Armanu EG, Bertoldi S, Chrzanowski Ł, Volf I, Heipieper HJ, Eberlein C. Benefits of Immobilized Bacteria in Bioremediation of Sites Contaminated with Toxic Organic Compounds. Microorganisms 2025; 13:155. [PMID: 39858923 PMCID: PMC11768004 DOI: 10.3390/microorganisms13010155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2024] [Revised: 01/09/2025] [Accepted: 01/10/2025] [Indexed: 01/27/2025] Open
Abstract
Although bioremediation is considered the most environmentally friendly and sustainable technique for remediating contaminated soil and water, it is most effective when combined with physicochemical methods, which allow for the preliminary removal of large quantities of pollutants. This allows microorganisms to efficiently eliminate the remaining contaminants. In addition to requiring the necessary genes and degradation pathways for specific substrates, as well as tolerance to adverse environmental conditions, microorganisms may perform below expectations. One typical reason for this is the high toxicity of xenobiotics present in large concentrations, stemming from the vulnerability of bacteria introduced to a contaminated site. This is especially true for planktonic bacteria, whereas bacteria within biofilms or microcolonies have significant advantages over their planktonic counterparts. A physical matrix is essential for the formation, maintenance, and survival of bacterial biofilms. By providing such a matrix for bacterial immobilization, the formation of biofilms can be facilitated and accelerated. Therefore, bioremediation combined with bacterial immobilization offers a comprehensive solution for environmental cleanup by harnessing the specialized metabolic activities of microorganisms while ensuring their retention and efficacy at target sites. In many cases, such bioremediation can also eliminate the need for physicochemical methods that are otherwise required to initially reduce contaminant concentrations. Then, it will be possible to use microorganisms for the remediation of higher concentrations of xenobiotics, significantly reducing costs while maintaining a rapid rate of remediation processes. This review explores the benefits of bacterial immobilization, highlighting materials and processes for developing an optimal immobilization matrix. It focuses on the following four key areas: (i) the types of organic pollutants impacting environmental and human health, (ii) the bacterial strains used in bioremediation processes, (iii) the types and benefits of immobilization, and (iv) the immobilization of bacterial cells on various carriers for targeted pollutant degradation.
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Affiliation(s)
- Emanuel Gheorghita Armanu
- Department of Molecular Environmental Biotechnology, Helmholtz Centre for Environmental Research—UFZ, 04318 Leipzig, Germany; (E.G.A.); (S.B.); (C.E.)
- Department of Environmental Engineering and Management, “Gheorghe Asachi” Technical University of Iasi, 73A Prof. D. Mangeron Blvd., 700050 Iasi, Romania
| | - Simone Bertoldi
- Department of Molecular Environmental Biotechnology, Helmholtz Centre for Environmental Research—UFZ, 04318 Leipzig, Germany; (E.G.A.); (S.B.); (C.E.)
| | - Łukasz Chrzanowski
- Institute of Chemical Technology and Engineering, Poznan University of Technology, 60-965 Poznan, Poland;
| | - Irina Volf
- Department of Environmental Engineering and Management, “Gheorghe Asachi” Technical University of Iasi, 73A Prof. D. Mangeron Blvd., 700050 Iasi, Romania
| | - Hermann J. Heipieper
- Department of Molecular Environmental Biotechnology, Helmholtz Centre for Environmental Research—UFZ, 04318 Leipzig, Germany; (E.G.A.); (S.B.); (C.E.)
| | - Christian Eberlein
- Department of Molecular Environmental Biotechnology, Helmholtz Centre for Environmental Research—UFZ, 04318 Leipzig, Germany; (E.G.A.); (S.B.); (C.E.)
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Martínez-Burgos WJ, Porto de Souza Vandenberghe L, Murawski de Mello AF, de Carvalho JC, Valladares-Diestra KK, Manzoki MC, Scapini T, Pozzan R, Liew RK, Thomaz-Soccol V, Soccol CR. Bioremediation strategies against pesticides: An overview of current knowledge and innovations. CHEMOSPHERE 2024; 364:142867. [PMID: 39019183 DOI: 10.1016/j.chemosphere.2024.142867] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 07/07/2024] [Accepted: 07/14/2024] [Indexed: 07/19/2024]
Abstract
Pesticides pose significant risks to both human health, such as cancer, neurological disorders, and endocrine disruption, and ecosystems, through the destruction of beneficial insects, contamination of soil and water, and impact on non-target species. In the face of escalating pesticide pollution, there is an urgent need for multifaceted approaches to address the issue. Bioremediation emerges as a potent tool in the environmental pollution mitigation arsenal. Ideally aiming for the complete decomposition of pesticides into harmless molecules, bioremediation encompasses diverse approaches - from bioabsorption, bioadsorption, and biotransformation using enzymes and nanoenzymes to comprehensive degradation facilitated by microorganisms such as bacteria, fungi, macro- and microalgae, or phytoremediation. Exploring nature's biodiversity offers a promising avenue to find solutions to this pressing human-induced problem. The acceleration of biodegradation necessitates identifying and developing efficient organisms, achieved through bioprospection and targeted modifications. Specific strategies to enhance process efficiency and throughput include optimizing biomass production, strategic inoculation in diverse environments, and employing bioreactor systems for processing heavily contaminated waters or soils. This comprehensive review presents various bioremediation approaches, emphasizing the importance of microorganisms' exploration and new technologies development, including current innovations and patents to effectively combat pesticide pollution. Furthermore, challenges regarding the effective implementation of these technologies are also addressed.
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Affiliation(s)
- Walter José Martínez-Burgos
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Luciana Porto de Souza Vandenberghe
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Ariane Fátima Murawski de Mello
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Júlio César de Carvalho
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Kim Kley Valladares-Diestra
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Maria Clara Manzoki
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Thamarys Scapini
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Roberta Pozzan
- Laboratory of Cell Toxicology, Department of Cell Biology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Rocky Keey Liew
- Center for Global Health Research (CGHR), Saveetha Medical College, Saveetha Institute of Medical and Technical Sciences (SIMATS), Saveetha University, Chennai, India
| | - Vanete Thomaz-Soccol
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil
| | - Carlos Ricardo Soccol
- Department of Bioprocess Engineering and Biotechnology, Federal University of Paraná, Centro Politécnico, CP 19011, Curitiba-PR, 81531-908, Brazil.
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Li J, Wen Y, Fang Z, Yang W, Song X. Application of cold-adapted microbial agents in soil contaminate remediation: biodegradation mechanisms, case studies, and safety assessments. RSC Adv 2024; 14:12720-12734. [PMID: 38645519 PMCID: PMC11027001 DOI: 10.1039/d4ra01510j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 04/11/2024] [Indexed: 04/23/2024] Open
Abstract
The microbial agent technology has made significant progress in remediating nitro-aromatic compounds (NACs), such as p-nitrophenol, 2,4-dinitrophenol, and 2,4,6-Trinitrotoluene, in farmland soil over the past decade. However, there are still gaps in our understanding of the bioavailability and degradation mechanisms of these compounds in low-temperature environments. In this review, we provide a comprehensive summary of the strategies employed by cold-adapted microorganisms and elucidate the degradation pathways of NACs pollutants. To further analyze their metabolic mechanisms, we propose using mass balance to improve our understanding of biochemical processes and refine the degradation pathways through stoichiometry analysis. Additionally, we suggest employing 13C-metabolic flux analysis to track enzyme activity and intermediate products during bio-degradation processes with the aim of accelerating the remediation of nitro-aromatic compounds, particularly in cold regions. Through a comprehensive analysis of pollutant metabolic activities and a commitment to the 'One Health' approach, with an emphasis on selecting non-pathogenic strains, the environmental management strategies for soil remediation could be positioned to develop and implement safe and effective measure.
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Affiliation(s)
- Jiaxin Li
- Key Laboratory of Regional Environment and Eco-restoration, Ministry of Education, Shenyang University Shenyang 110044 China +86(24)62269636
| | - Yujuan Wen
- Key Laboratory of Regional Environment and Eco-restoration, Ministry of Education, Shenyang University Shenyang 110044 China +86(24)62269636
- Northeast Geological S&T Innovation Center of China Geological Survey, Shenyang University Shenyang 110044 China
- Key Laboratory of Black Soil Evolution and Ecological Effect, Ministry of Natural Resources China
| | - Zheng Fang
- Key Laboratory of Regional Environment and Eco-restoration, Ministry of Education, Shenyang University Shenyang 110044 China +86(24)62269636
| | - Wenqi Yang
- Key Laboratory of Regional Environment and Eco-restoration, Ministry of Education, Shenyang University Shenyang 110044 China +86(24)62269636
| | - Xiaoming Song
- Key Laboratory of Regional Environment and Eco-restoration, Ministry of Education, Shenyang University Shenyang 110044 China +86(24)62269636
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Sakhaei A, Zamir SM, Rene ER, Veiga MC, Kennes C. Neural network-based performance assessment of one- and two-liquid phase biotrickling filters for the removal of a waste-gas mixture containing methanol, α-pinene, and hydrogen sulfide. ENVIRONMENTAL RESEARCH 2023; 237:116978. [PMID: 37633629 DOI: 10.1016/j.envres.2023.116978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Revised: 08/04/2023] [Accepted: 08/23/2023] [Indexed: 08/28/2023]
Abstract
The performance of one- and two-liquid phase biotrickling filters (OLP/TLP-BTFs) treating a mixture of gas-phase methanol (M), α-pinene (P), and hydrogen sulfide (H) was assessed using artificial neural network (ANN) modeling. The best ANN models with the topologies 3-9-3 and 3-10-3 demonstrated an exceptional capacity for predicting the performance of O/TLP-BTFs, with R2 > 99%. The analysis of causal index (CI) values for the model of OLP-BTF revealed a negative impact of M on P removal (CI = -2.367), a positive influence of P and H on M removal (CI = +7.536 and CI = +3.931) and a negative effect of H on P removal (CI = -1.640). The addition of silicone oil in TLP-BTF reduced the negative impact of M and H on P degradation (CI = -1.261 and CI = -1.310, respectively) compared to the OLP-BTF. These findings suggested that silicone oil had the potential to improve P availability to the biofilm by increasing the concentration gradient of P between the air/gas and aqueous phases. Multi-objective particle swarm optimization (MOPSO) suggested an optimum operational condition, i.e. inlet M, P, and H concentrations of 1.0, 1.1, and 0.3 g m-3, respectively, with elimination capacities (ECs) of 172.1, 26.5, and 0.025 g m-3 h-1 for OLP-BTF. Likewise, one of the optimum operational conditions for TLP-BTF is achievable at inlet concentrations of 4.9, 1.7, and 0.8 g m-3, leading to the optimum ECs of 299.7, 52.9, and 0.072 g m-3 h-1 for M, P, and H, respectively. These results provide important insights into the treatment of complex waste gas mixtures, addressing the interactions between the pollutant removal characteristics in OLP/TLP-BTFs and providing novel approaches in the field of biological waste gas treatment.
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Affiliation(s)
- Amirmohammad Sakhaei
- Biochemical Engineering Department, Faculty of Chemical Engineering, Tarbiat Modares University, Tehran, P.O. Box 14115-114, Iran
| | - Seyed Morteza Zamir
- Biochemical Engineering Department, Faculty of Chemical Engineering, Tarbiat Modares University, Tehran, P.O. Box 14115-114, Iran.
| | - Eldon R Rene
- Department of Water Supply, Sanitation and Environmental Engineering, IHE Delft Institute for Water Education, Westvest 7, P. O. Box 3015, 2611AX, Delft, the Netherlands
| | - María C Veiga
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research - Centro de Investigaciones Científicas Avanzadas (CICA), BIOENGIN Group, University of La Coruña, E - 15008, A Coruña, Spain
| | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Sciences and Centre for Advanced Scientific Research - Centro de Investigaciones Científicas Avanzadas (CICA), BIOENGIN Group, University of La Coruña, E - 15008, A Coruña, Spain
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Mishra A, Goel D, Shankar S. Bisphenol A contamination in aquatic environments: a review of sources, environmental concerns, and microbial remediation. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:1352. [PMID: 37861868 DOI: 10.1007/s10661-023-11977-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Accepted: 10/09/2023] [Indexed: 10/21/2023]
Abstract
The production of polycarbonate, a high-performance transparent plastic, employs bisphenol A, which is a prominent endocrine-disrupting compound. Polycarbonates are frequently used in the manufacturing of food, bottles, storage containers for newborns, and beverage packaging materials. Global production of BPA in 2022 was estimated to be in the region of 10 million tonnes. About 65-70% of all bisphenol A is used to make polycarbonate plastics. Bisphenol A leaches from improperly disposed plastic items and enters the environment through wastewater from plastic-producing industries, contaminating, sediments, surface water, and ground water. The concentration BPA in industrial and domestic wastewater ranges from 16 to 1465 ng/L while in surface water it has been detected 170-3113 ng/L. Wastewater treatment can be highly effective at removing BPA, giving reductions of 91-98%. Regardless, the remaining 2-9% of BPA will continue through to the environment, with low levels of BPA commonly observed in surface water and sediment in the USA and Europe. The health effects of BPA have been the subject of prolonged public and scientific debate, with PubMed listing more than 17,000 scientific papers as of 2023. Bisphenol A poses environmental and health hazards in aquatic systems, affecting ecosystems and human health. While several studies have revealed its presence in aqueous streams, environmentally sound technologies should be explored for its removal from the contaminated environment. Concern is mostly related to its estrogen-like activity, although it can interact with other receptor systems as an endocrine-disrupting chemical. Present review article encompasses the updated information on sources, environmental concerns, and sustainable remediation techniques for bisphenol A removal from aquatic ecosystems, discussing gaps, constraints, and future research requirements.
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Affiliation(s)
- Anuradha Mishra
- Department of Applied Chemistry, School of Vocational Studies and Applied Sciences (SoVSAS), Gautam Buddha University (GBU), Govt. of Uttar Pradesh, Greater Noida, Uttar Pradesh, 201 312, India
| | - Divya Goel
- Department of Environmental Science, School of Vocational Studies and Applied Sciences (SoVSAS), Gautam Buddha University (GBU), Govt. of Uttar Pradesh, Greater Noida, Uttar Pradesh, 201 312, India
| | - Shiv Shankar
- Department of Environmental Science, School of Vocational Studies and Applied Sciences (SoVSAS), Gautam Buddha University (GBU), Govt. of Uttar Pradesh, Greater Noida, Uttar Pradesh, 201 312, India.
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