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Zhang R, Qu S, Zhang B, Gao Y, Xing F. Interactive effects between the invasive weed Stellera chamaejasme and grass: can arbuscular mycorrhizal fungi and fungal pathogens coregulate interspecific relationships? Front Microbiol 2023; 14:1236891. [PMID: 37711687 PMCID: PMC10498474 DOI: 10.3389/fmicb.2023.1236891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 08/15/2023] [Indexed: 09/16/2023] Open
Abstract
The interaction between poisonous weeds and neighboring plants is complex. Poisonous weeds frequently have a competitive advantage in the interaction between poisonous weeds and neighboring plants. Arbuscular mycorrhizal fungi (AMF) and plant pathogenic fungi (PPF) are closely related to the interspecific relationships of plants. However, the role of AMF and PPF between poisonous weeds and neighboring grasses remains unclear. Here, we designed a pot experiment to determine the interspecific relationship between Leymus chinensis and Stellera chamaejasme and the regulation of AMF and PPF. The results showed that interactive effects between L. chinensis and S. chamaejasme significantly inhibited the aboveground growth of both but promoted the underground growth of L. chinensis. As the proportions of S. chamaejasme increased, the total nitrogen content and pH in the rhizosphere soil of L. chinensis were reduced, the soil pH of S. chamaejasme was reduced, and the relative abundance of AMF in the rhizosphere soil of L. chinensis significantly increased and that of S. chamaejasme decreased considerably. The relative abundances of PPF in the rhizosphere soil of both in the mono-cultures were significantly higher than those in the mixed cultures. Structural equation modeling indicated that soil abiotic (pH and N availability) and biotic (AMF and PPF) factors are major drivers explaining the interactive effects between L. chinensis and S. chamaejasme. We provided new evidence for the interspecific interactions between poisonous weeds and neighboring grasses and revealed the regulatory role of AMF and PPF in the interactive effects of both plants. This study will provide a scientific basis for the prevention and control of poisonous weeds and the vegetation restoration of degraded grasslands in the future.
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Affiliation(s)
- Ruohui Zhang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Northeast Normal University, Changchun, China
| | - Shanmin Qu
- College of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing, China
| | - Bin Zhang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Northeast Normal University, Changchun, China
| | - Ying Gao
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Northeast Normal University, Changchun, China
| | - Fu Xing
- Key Laboratory of Vegetation Ecology, Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Northeast Normal University, Changchun, China
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Fang L, Wang M, Chen X, Zhao J, Wang J, Liu J. Analysis of the AMT gene family in chili pepper and the effects of arbuscular mycorrhizal colonization on the expression patterns of CaAMT2 genes. BMC Genomics 2023; 24:158. [PMID: 36991328 DOI: 10.1186/s12864-023-09226-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Accepted: 03/06/2023] [Indexed: 03/31/2023] Open
Abstract
BACKGROUND Ammonium (NH4+) is a key nitrogen source supporting plant growth and development. Proteins in the ammonium transporter (AMT) family mediate the movement of NH4+ across the cell membrane. Although several studies have examined AMT genes in various plant species, few studies of the AMT gene family have been conducted in chili pepper. RESULTS Here, a total of eight AMT genes were identified in chili pepper, and their exon/intron structures, phylogenetic relationships, and expression patterns in response to arbuscular mycorrhizal (AM) colonization were explored. Synteny analyses among chili pepper, tomato, eggplant, soybean, and Medicago revealed that the CaAMT2;1, CaAMT2.4, and CaAMT3;1 have undergone an expansion prior to the divergence of Solanaceae and Leguminosae. The expression of six AMT2 genes was either up-regulated or down-regulated in response to AM colonization. The expression of CaAMT2;1/2;2/2;3 and SlAMT2;1/2;2/2;3 was significantly up-regulated in AM fungi-inoculated roots. A 1,112-bp CaAMT2;1 promoter fragment and a 1,400-bp CaAMT2;2 promoter fragment drove the expression of the β-glucuronidase gene in the cortex of AM roots. Evaluation of AM colonization under different NH4+ concentrations revealed that a sufficient, but not excessive, supply of NH4+ promotes the growth of chili pepper and the colonization of AM. Furthermore, we demonstrated that CaAMT2;2 overexpression could mediate NH4+ uptake in tomato plants. CONCLUSION In sum, our results provide new insights into the evolutionary relationships and functional divergence of chili pepper AMT genes. We also identified putative AMT genes expressed in AM symbiotic roots.
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Affiliation(s)
- Lei Fang
- College of Resource and Environment, Anhui Science and Technology University, Fengyang, China
| | - Miaomiao Wang
- College of Resource and Environment, Anhui Science and Technology University, Fengyang, China
| | - Xiao Chen
- MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, China
- Guangdong Key Laboratory for New Technology Research of Vegetables, Vegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangdong, China
| | - Jianrong Zhao
- College of Resource and Environment, Anhui Science and Technology University, Fengyang, China
| | - Jianfei Wang
- College of Resource and Environment, Anhui Science and Technology University, Fengyang, China
| | - Jianjian Liu
- College of Resource and Environment, Anhui Science and Technology University, Fengyang, China.
- MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, China.
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Nuclear Genome Sequence and Gene Expression of an Intracellular Fungal Endophyte Stimulating the Growth of Cranberry Plants. J Fungi (Basel) 2023; 9:jof9010126. [PMID: 36675947 PMCID: PMC9861600 DOI: 10.3390/jof9010126] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 01/04/2023] [Accepted: 01/11/2023] [Indexed: 01/18/2023] Open
Abstract
Ericaceae thrive in poor soil, which we postulate is facilitated by microbes living inside those plants. Here, we investigate the growth stimulation of the American cranberry (Vaccinium macrocarpon) by one of its fungal endosymbionts, EC4. We show that the symbiont resides inside the epidermal root cells of the host but extends into the rhizosphere via its hyphae. Morphological classification of this fungus is ambiguous, but phylogenetic inference based on 28S rRNA identifies EC4 as a Codinaeella species (Chaetosphaeriaceae, Sordariomycetes, Ascomycetes). We sequenced the genome and transcriptome of EC4, providing the first 'Omics' information of a Chaetosphaeriaceae fungus. The 55.3-Mbp nuclear genome contains 17,582 potential protein-coding genes, of which nearly 500 have the capacity to promote plant growth. For comparing gene sets involved in biofertilization, we annotated the published genome assembly of the plant-growth-promoting Trichoderma hamatum. The number of proteins involved in phosphate transport and solubilization is similar in the two fungi. In contrast, EC4 has ~50% more genes associated with ammonium, nitrate/nitrite transport, and phytohormone synthesis. The expression of 36 presumed plant-growth-promoting EC4 genes is stimulated when the fungus is in contact with the plant. Thus, Omics and in-plantae tests make EC4 a promising candidate for cranberry biofertilization on nutrient-poor soils.
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Jiang Q, Lin C, Guo R, Xiong D, Yao X, Wang X, Chen T, Jia L, Wu D, Fan A, Chen G, Yang Y. Root nitrogen uptake capacity of Chinese fir enhanced by warming and nitrogen addition. TREE PHYSIOLOGY 2023; 43:31-46. [PMID: 36049081 DOI: 10.1093/treephys/tpac103] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Accepted: 08/30/2022] [Indexed: 06/15/2023]
Abstract
There is a knowledge gap in the effects of climate warming and nitrogen (N) deposition on root N absorption capacity, which limits our ability to predict how climate change alters the N cycling and its consequences for forest productivity especially in subtropical areas where soil N availability is already high. In order to explore the effects and mechanism of warming and the N deposition on root N absorption capacity of Chinese fir (Cunninghamia lanceolata), a subtropical arbuscular mycorrhizal conifer, the fine root 15NH4+ and 15NO3- uptake kinetics at a reference temperature of 20 °C were measured across different seasons in a factorial soil warming (ambient, +5 °C) × N addition (ambient, +40 kg N ha-1 yr-1) experiment. The results showed that (i) compared with the control, warming increased the maximal uptake rate of NH4+ (Vmax,20 °C-NH4+) in summer, while N addition enhanced it in spring and summer; compared with non-warming treatments, warming treatments increased the uptake rate of NO3- at a reference concentration of 100 μmol (V100,20 °C-NO3-) in spring. (ii) The analysis of covariance showed that Vmax,20 °C-NH4+ was positively correlated with root mycorrhizal colonization rate (MCR) and V100,20 °C-NO3- was positively correlated with specific root respiration rate (SRR), whereas no N uptake kinetic parameter was correlated with specific root length, root N and non-structural carbon concentrations. Thus, our results demonstrate that warming-increased root NH4+ uptake might be related to warming-increased MCR, whereas warming-increased root NO3- uptake might be related to warming-increased SRR. We conclude that root NH4+ and NO3- uptake capacity of subtropical Chinese fir can be elevated under warming and N deposition, which could improve plantation productivity and mitigate N leaching loss and soil acidification.
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Affiliation(s)
- Qi Jiang
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Chengfang Lin
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Runquan Guo
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Decheng Xiong
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Xiaodong Yao
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Xiaohong Wang
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Tingting Chen
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Linqiao Jia
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Dongmei Wu
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Ailian Fan
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Guangshui Chen
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Yusheng Yang
- Fujian Sanming Forest Ecosystem National Observation and Research Station, School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
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He C, Lin Y, Zhang Y, Tong L, Ding Y, Yao M, Liu Q, Zeng R, Chen D, Song Y. Aboveground herbivory does not affect mycorrhiza-dependent nitrogen acquisition from soil but inhibits mycorrhizal network-mediated nitrogen interplant transfer in maize. FRONTIERS IN PLANT SCIENCE 2022; 13:1080416. [PMID: 36589048 PMCID: PMC9795027 DOI: 10.3389/fpls.2022.1080416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) are considered biofertilizers for sustainable agriculture due to their ability to facilitate plant uptake of important mineral elements, such as nitrogen (N). However, plant mycorrhiza-dependent N uptake and interplant transfer may be highly context-dependent, and whether it is affected by aboveground herbivory remains largely unknown. Here, we used 15N labeling and tracking to examine the effect of aboveground insect herbivory by Spodoptera frugiperda on mycorrhiza-dependent N uptake in maize (Zea mays L.). To minimize consumption differences and 15N loss due to insect chewing, insect herbivory was simulated by mechanical wounding and oral secretion of S. frugiperda larvae. Inoculation with Rhizophagus irregularis (Rir) significantly improved maize growth, and N/P uptake. The 15N labeling experiment showed that maize plants absorbed N from soils via the extraradical mycelium of mycorrhizal fungi and from neighboring plants transferred by common mycorrhizal networks (CMNs). Simulated aboveground leaf herbivory did not affect mycorrhiza-mediated N acquisition from soil. However, CMN-mediated N transfer from neighboring plants was blocked by leaf simulated herbivory. Our findings suggest that aboveground herbivory inhibits CMN-mediated N transfer between plants but does not affect N acquisition from soil solutions via extraradical mycorrhizal mycelium.
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Affiliation(s)
- Chenling He
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yibin Lin
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yifang Zhang
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Lu Tong
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yuanxing Ding
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Min Yao
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Qian Liu
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Rensen Zeng
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Institute of Chemical Ecology and Crop Resistance, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Dongmei Chen
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Institute of Chemical Ecology and Crop Resistance, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yuanyuan Song
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Institute of Chemical Ecology and Crop Resistance, Fujian Agriculture and Forestry University, Fuzhou, China
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6
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Duret M, Zhan X, Belval L, Le Jeune C, Hussenet R, Laloue H, Bertsch C, Chong J, Deglène-Benbrahim L, Valat L. Use of a RT-qPCR Method to Estimate Mycorrhization Intensity and Symbiosis Vitality in Grapevine Plants Inoculated with Rhizophagus irregularis. PLANTS (BASEL, SWITZERLAND) 2022; 11:3237. [PMID: 36501279 PMCID: PMC9741363 DOI: 10.3390/plants11233237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/15/2022] [Accepted: 11/18/2022] [Indexed: 06/17/2023]
Abstract
Assessing the mycorrhization level in plant roots is essential to study the effect of arbuscular mycorrhizal fungi (AMF) on plant physiological responses. Common methods used to quantify the mycorrhization of roots are based on microscopic visualization of stained fungal structures within the cortical cells. While this method is readily accessible, it remains time-consuming and does not allow checking of the symbiosis vitality. The aim of this work is thus to develop an efficient method for assessing the intensity and vitality of mycorrhiza associated with grapevine through gene expression analyses by RT-qPCR. To this end, grapevine plants were inoculated with the AMF Rhizophagus irregularis (Ri). The relationship between mycorrhization level, assessed by microscopy, and expression of several fungus and grapevine genes involved in the symbiosis was investigated. In AMF-inoculated plants, transcript amounts of fungal constitutively-expressed genes Ri18S, RiTEF1α and RiαTub were significantly correlated to mycorrhization intensity, particularly Ri18S. Grapevine (VvPht1.1 and VvPht1.2) and AMF (GintPT, Ri14-3-3 and RiCRN1) genes, known to be specifically expressed during the mycorrhizal process, were significantly correlated to arbuscular level in the whole root system determined by microscopy. The best correlations were obtained with GintPT on the fungal side and VvPht1.2 on the plant side. Despite some minor discrepancies between microscopic and molecular techniques, the monitoring of Ri18S, GintPT and VvPht1.2 gene expression could be a rapid, robust and reliable method to evaluate the level of mycorrhization and to assess the vitality of AMF. It appears particularly useful to identify AMF-inoculated plants with very low colonization level, or with non-active fungal structures. Moreover, it can be implemented simultaneously with the expression analysis of other genes of interest, saving time compared to microscopic analyses.
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Affiliation(s)
- Morgane Duret
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Xi Zhan
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Lorène Belval
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Christine Le Jeune
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Réjane Hussenet
- Département Génie Biologique, Institut Universitaire de Technologie, 29 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Hélène Laloue
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Christophe Bertsch
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Julie Chong
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Laurence Deglène-Benbrahim
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
| | - Laure Valat
- Laboratoire Vigne, Biotechnologies et Environnement, Université de Haute Alsace, Université de Strasbourg, E.A. 3991, 33 rue de Herrlisheim, BP 50568, CEDEX 008, 68000 Colmar, France
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7
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Hui J, An X, Li Z, Neuhäuser B, Ludewig U, Wu X, Schulze WX, Chen F, Feng G, Lambers H, Zhang F, Yuan L. The mycorrhiza-specific ammonium transporter ZmAMT3;1 mediates mycorrhiza-dependent nitrogen uptake in maize roots. THE PLANT CELL 2022; 34:4066-4087. [PMID: 35880836 PMCID: PMC9516061 DOI: 10.1093/plcell/koac225] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Accepted: 06/18/2022] [Indexed: 06/15/2023]
Abstract
Most plant species can form symbioses with arbuscular mycorrhizal fungi (AMFs), which may enhance the host plant's acquisition of soil nutrients. In contrast to phosphorus nutrition, the molecular mechanism of mycorrhizal nitrogen (N) uptake remains largely unknown, and its physiological relevance is unclear. Here, we identified a gene encoding an AMF-inducible ammonium transporter, ZmAMT3;1, in maize (Zea mays) roots. ZmAMT3;1 was specifically expressed in arbuscule-containing cortical cells and the encoded protein was localized at the peri-arbuscular membrane. Functional analysis in yeast and Xenopus oocytes indicated that ZmAMT3;1 mediated high-affinity ammonium transport, with the substrate NH4+ being accessed, but likely translocating uncharged NH3. Phosphorylation of ZmAMT3;1 at the C-terminus suppressed transport activity. Using ZmAMT3;1-RNAi transgenic maize lines grown in compartmented pot experiments, we demonstrated that substantial quantities of N were transferred from AMF to plants, and 68%-74% of this capacity was conferred by ZmAMT3;1. Under field conditions, the ZmAMT3;1-dependent mycorrhizal N pathway contributed >30% of postsilking N uptake. Furthermore, AMFs downregulated ZmAMT1;1a and ZmAMT1;3 protein abundance and transport activities expressed in the root epidermis, suggesting a trade-off between mycorrhizal and direct root N-uptake pathways. Taken together, our results provide a comprehensive understanding of mycorrhiza-dependent N uptake in maize and present a promising approach to improve N-acquisition efficiency via plant-microbe interactions.
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Affiliation(s)
- Jing Hui
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
| | - Xia An
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
| | - Zhibo Li
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
| | - Benjamin Neuhäuser
- Department of Nutritional Crop Physiology, Institute of Crop Science, University of Hohenheim, Stuttgart, 70593, Germany
| | - Uwe Ludewig
- Department of Nutritional Crop Physiology, Institute of Crop Science, University of Hohenheim, Stuttgart, 70593, Germany
| | - Xuna Wu
- Department of Plant Systems Biology, Institute for Physiology and Biotechnology of Plants, University of Hohenheim, Stuttgart, 70593, Germany
| | - Waltraud X Schulze
- Department of Plant Systems Biology, Institute for Physiology and Biotechnology of Plants, University of Hohenheim, Stuttgart, 70593, Germany
| | - Fanjun Chen
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
| | - Gu Feng
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
| | - Hans Lambers
- School of Biological Science and Institute of Agriculture, University of Western Australia, Perth, WA6009, Australia
| | - Fusuo Zhang
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, MOE, China Agricultural University, Beijing, 100193, China
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8
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Rui W, Mao Z, Li Z. The Roles of Phosphorus and Nitrogen Nutrient Transporters in the Arbuscular Mycorrhizal Symbiosis. Int J Mol Sci 2022; 23:11027. [PMID: 36232323 PMCID: PMC9570102 DOI: 10.3390/ijms231911027] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 09/08/2022] [Accepted: 09/16/2022] [Indexed: 11/16/2022] Open
Abstract
More than 80% of land plant species can form symbioses with arbuscular mycorrhizal (AM) fungi, and nutrient transfer to plants is largely mediated through this partnership. Over the last few years, great progress has been made in deciphering the molecular mechanisms underlying the AM-mediated modulation of nutrient uptake progress, and a growing number of fungal and plant genes responsible for the uptake of nutrients from soil or transfer across the fungal-root interface have been identified. In this review, we outline the current concepts of nutrient exchanges within this symbiosis (mechanisms and regulation) and focus on P and N transfer from the fungal partner to the host plant, with a highlight on a possible interplay between P and N nutrient exchanges. Transporters belonging to the plant or AM fungi can synergistically process the transmembrane transport of soil nutrients to the symbiotic interface for further plant acquisition. Although much progress has been made to elucidate the complex mechanism for the integrated roles of nutrient transfers in AM symbiosis, questions still remain to be answered; for example, P and N transporters are less studied in different species of AM fungi; the involvement of AM fungi in plant N uptake is not as clearly defined as that of P; coordinated utilization of N and P is unknown; transporters of cultivated plants inoculated with AM fungi and transcriptomic and metabolomic networks at both the soil-fungi interface and fungi-plant interface have been insufficiently studied. These findings open new perspectives for fundamental research and application of AM fungi in agriculture.
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Affiliation(s)
| | | | - Zhifang Li
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, Department of Vegetable Science, College of Horticulture, China Agricultural University (CAU), Haidian District, Yuanmingyuanxilu 2, Beijing 100193, China
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9
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Arbuscular mycorrhizae: natural modulators of plant–nutrient relation and growth in stressful environments. Arch Microbiol 2022; 204:264. [DOI: 10.1007/s00203-022-02882-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Revised: 03/20/2022] [Accepted: 03/28/2022] [Indexed: 11/02/2022]
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10
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Wang Y, He X, Yu F. Non-host plants: Are they mycorrhizal networks players? PLANT DIVERSITY 2022; 44:127-134. [PMID: 35505991 PMCID: PMC9043302 DOI: 10.1016/j.pld.2021.06.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 06/01/2021] [Accepted: 06/15/2021] [Indexed: 05/04/2023]
Abstract
Common mycorrhizal networks (CMNs) that connect individual plants of the same or different species together play important roles in nutrient and signal transportation, and plant community organization. However, about 10% of land plants are non-mycorrhizal species with roots that do not form any well-recognized types of mycorrhizas; and each mycorrhizal fungus can only colonize a limited number of plant species, resulting in numerous non-host plants that could not establish typical mycorrhizal symbiosis with a specific mycorrhizal fungus. If and how non-mycorrhizal or non-host plants are able to involve in CMNs remains unclear. Here we summarize studies focusing on mycorrhizal-mediated host and non-host plant interaction. Evidence has showed that some host-supported both arbuscular mycorrhizal (AM) and ectomycorrhizal (EM) hyphae can access to non-host plant roots without forming typical mycorrhizal structures, while such non-typical mycorrhizal colonization often inhibits the growth but enhances the induced system resistance of non-host plants. Meanwhile, the host growth is also differentially affected, depending on plant and fungi species. Molecular analyses suggested that the AMF colonization to non-hosts is different from pathogenic and endophytic fungi colonization, and the hyphae in non-host roots may be alive and have some unknown functions. Thus we propose that non-host plants are also important CMNs players. Using non-mycorrhizal model species Arabidopsis, tripartite culture system and new technologies such as nanoscale secondary ion mass spectrometry and multi-omics, to study nutrient and signal transportation between host and non-host plants via CMNs may provide new insights into the mechanisms underlying benefits of intercropping and agro-forestry systems, as well as plant community establishment and stability.
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Affiliation(s)
- Yanliang Wang
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
| | - Xinhua He
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
- Department of Land, Air and Water Resources, University of California at Davis, Davis, CA, 95616, USA
- School of Biological Sciences, University of Western Australia, Perth, WA, 6009, Australia
| | - Fuqiang Yu
- The Germplasm Bank of Wild Species, Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
- Corresponding author.
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11
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Xie K, Ren Y, Chen A, Yang C, Zheng Q, Chen J, Wang D, Li Y, Hu S, Xu G. Plant nitrogen nutrition: The roles of arbuscular mycorrhizal fungi. JOURNAL OF PLANT PHYSIOLOGY 2022; 269:153591. [PMID: 34936969 DOI: 10.1016/j.jplph.2021.153591] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2021] [Revised: 12/08/2021] [Accepted: 12/09/2021] [Indexed: 06/14/2023]
Abstract
Nitrogen (N) is the most abundant mineral nutrient required by plants, and crop productivity depends heavily on N fertilization in many soils. Production and application of N fertilizers consume huge amounts of energy and substantially increase the costs of agricultural production. Excess N compounds released from agricultural systems are also detrimental to the environment. Thus, increasing plant N uptake efficiency is essential for the development of sustainable agriculture. Arbuscular mycorrhizal (AM) fungi are beneficial symbionts of most terrestrial plants that facilitate plant nutrient uptake and increase host resistance to diverse environmental stresses. AM association is an endosymbiotic process that relies on the differentiation of both host plant roots and AM fungi to create novel contact interfaces within the cells of plant roots. AM plants have two pathways for nutrient uptake: either direct uptake via the root hairs and root epidermis, or indirectly through AM fungal hyphae into root cortical cells. Over the last few years, great progress has been made in deciphering the molecular mechanisms underlying the AM-mediated modulation of nutrient uptake processes, and a growing number of fungal and plant genes responsible for the uptake of nutrients from soil or transfer across the fungi-root interface have been identified. Here, we mainly summarize the recent advances in N uptake, assimilation, and translocation in AM symbiosis, and also discuss how N interplays with C and P in modulating AM development, as well as the synergies between AM fungi and soil microbial communities in N uptake.
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Affiliation(s)
- Kun Xie
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Yuhan Ren
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Aiqun Chen
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China.
| | - Congfan Yang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Qingsong Zheng
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Jun Chen
- College of Horticulture Technology, Suzhou Polytechnic Institute of Agriculture, Suzhou, 215008, China
| | - Dongsheng Wang
- Department of Ecological Environment and Soil Science, Nanjing Institute of Vegetable Science, Nanjing, Jiangsu, China
| | - Yiting Li
- Key Laboratory of Tobacco Genetic Improvement and Biotechnology, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China
| | - Shuijin Hu
- Department of Entomology & Plant Pathology, North Carolina State University, Raleigh, NC, 27695, USA
| | - Guohua Xu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
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Abstract
Rhizophagus irregularis is one of the most extensively studied arbuscular mycorrhizal fungi (AMF) that forms symbioses with and improves the performance of many crops. Lack of transformation protocol for R. irregularis renders it challenging to investigate molecular mechanisms that shape the physiology and interactions of this AMF with plants. Here, we used all published genomics, transcriptomics, and metabolomics resources to gain insights into the metabolic functionalities of R. irregularis by reconstructing its high-quality genome-scale metabolic network that considers enzyme constraints. Extensive validation tests with the enzyme-constrained metabolic model demonstrated that it can be used to (i) accurately predict increased growth of R. irregularis on myristate with minimal medium; (ii) integrate enzyme abundances and carbon source concentrations that yield growth predictions with high and significant Spearman correlation (ρS = 0.74) to measured hyphal dry weight; and (iii) simulate growth rate increases with tighter association of this AMF with the host plant across three fungal structures. Based on the validated model and system-level analyses that integrate data from transcriptomics studies, we predicted that differences in flux distributions between intraradical mycelium and arbuscles are linked to changes in amino acid and cofactor biosynthesis. Therefore, our results demonstrated that the enzyme-constrained metabolic model can be employed to pinpoint mechanisms driving developmental and physiological responses of R. irregularis to different environmental cues. In conclusion, this model can serve as a template for other AMF and paves the way to identify metabolic engineering strategies to modulate fungal metabolic traits that directly affect plant performance. IMPORTANCE Mounting evidence points to the benefits of the symbiotic interactions between the arbuscular mycorrhiza fungus Rhizophagus irregularis and crops; however, the molecular mechanisms underlying the physiological responses of this fungus to different host plants and environments remain largely unknown. We present a manually curated, enzyme-constrained, genome-scale metabolic model of R. irregularis that can accurately predict experimentally observed phenotypes. We show that this high-quality model provides an entry point into better understanding the metabolic and physiological responses of this fungus to changing environments due to the availability of different nutrients. The model can be used to design metabolic engineering strategies to tailor R. irregularis metabolism toward improving the performance of host plants.
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13
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Differential effectiveness of Arbuscular Mycorrhizae in improving Rhizobial symbiosis by modulating Sucrose metabolism and Antioxidant defense in Chickpea under As stress. Symbiosis 2022. [DOI: 10.1007/s13199-021-00815-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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14
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Fungi: Essential Elements in the Ecosystems. Fungal Biol 2022. [DOI: 10.1007/978-3-030-89664-5_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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15
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Wang Y, Bao X, Li S. Effects of Arbuscular Mycorrhizal Fungi on Rice Growth Under Different Flooding and Shading Regimes. Front Microbiol 2021; 12:756752. [PMID: 34764946 PMCID: PMC8577809 DOI: 10.3389/fmicb.2021.756752] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 10/06/2021] [Indexed: 11/24/2022] Open
Abstract
Arbuscular mycorrhizal fungi (AMF) are present in paddy fields, where they suffer from periodic soil flooding and sometimes shading stress, but their interaction with rice plants in these environments is not yet fully explained. Based on two greenhouse experiments, we examined rice-growth response to AMF under different flooding and/or shading regimes to survey the regulatory effects of flooding on the mycorrhizal responses of rice plants under different light conditions. AMF had positive or neutral effects on the growth and yields of both tested rice varieties under non-flooding conditions but suppressed them under all flooding and/or shading regimes, emphasizing the high importance of flooding and shading conditions in determining the mycorrhizal effects. Further analyses indicated that flooding and shading both reduced the AMF colonization and extraradical hyphal density (EHD), implying a possible reduction of carbon investment from rice to AMF. The expression profiles of mycorrhizal P pathway marker genes (GintPT and OsPT11) suggested the P delivery from AMF to rice roots under all flooding and shading conditions. Nevertheless, flooding and shading both decreased the mycorrhizal P benefit of rice plants, as indicated by the significant decrease of mycorrhizal P responses (MPRs), contributing to the negative mycorrhizal effects on rice production. The expression profiles of rice defense marker genes OsPR1 and OsPBZ1 suggested that regardless of mycorrhizal growth responses (MGRs), AMF colonization triggered the basal defense response, especially under shading conditions, implying the multifaceted functions of AMF symbiosis and their effects on rice performance. In conclusion, this study found that flooding and shading both modulated the outcome of AMF symbiosis for rice plants, partially by influencing the mycorrhizal P benefit. This finding has important implications for AMF application in rice production.
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Affiliation(s)
- Yutao Wang
- Key Laboratory of Ecology and Environmental Science in Guangdong Higher Education and Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Sciences, South China Normal University, Guangzhou, China
| | - Xiaozhe Bao
- Key Laboratory of Ecology and Environmental Science in Guangdong Higher Education and Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Sciences, South China Normal University, Guangzhou, China
| | - Shaoshan Li
- Key Laboratory of Ecology and Environmental Science in Guangdong Higher Education and Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Sciences, South China Normal University, Guangzhou, China
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16
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Zhou X, Li J, Tang N, Xie H, Fan X, Chen H, Tang M, Xie X. Genome-Wide Analysis of Nutrient Signaling Pathways Conserved in Arbuscular Mycorrhizal Fungi. Microorganisms 2021; 9:1557. [PMID: 34442636 PMCID: PMC8401276 DOI: 10.3390/microorganisms9081557] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 07/13/2021] [Accepted: 07/16/2021] [Indexed: 01/03/2023] Open
Abstract
Arbuscular mycorrhizal (AM) fungi form a mutualistic symbiosis with a majority of terrestrial vascular plants. To achieve an efficient nutrient trade with their hosts, AM fungi sense external and internal nutrients, and integrate different hierarchic regulations to optimize nutrient acquisition and homeostasis during mycorrhization. However, the underlying molecular networks in AM fungi orchestrating the nutrient sensing and signaling remain elusive. Based on homology search, we here found that at least 72 gene components involved in four nutrient sensing and signaling pathways, including cAMP-dependent protein kinase A (cAMP-PKA), sucrose non-fermenting 1 (SNF1) protein kinase, target of rapamycin kinase (TOR) and phosphate (PHO) signaling cascades, are well conserved in AM fungi. Based on the knowledge known in model yeast and filamentous fungi, we outlined the possible gene networks functioning in AM fungi. These pathways may regulate the expression of downstream genes involved in nutrient transport, lipid metabolism, trehalase activity, stress resistance and autophagy. The RNA-seq analysis and qRT-PCR results of some core genes further indicate that these pathways may play important roles in spore germination, appressorium formation, arbuscule longevity and sporulation of AM fungi. We hope to inspire further studies on the roles of these candidate genes involved in these nutrient sensing and signaling pathways in AM fungi and AM symbiosis.
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Affiliation(s)
- Xiaoqin Zhou
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
| | - Jiangyong Li
- Institute for Environmental and Climate Research, Jinan University, Guangzhou 511443, China;
| | - Nianwu Tang
- UMR Interactions Arbres/Microorganismes, Centre INRA-Grand Est-Nancy, 54280 Champenoux, France;
| | - Hongyun Xie
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
| | - Xiaoning Fan
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
| | - Hui Chen
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
| | - Ming Tang
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
| | - Xianan Xie
- State Key Laboratory of Conservation and Utilization of Subtropical Agro-Bioresources, Lingnan Guangdong Laboratory of Modern Agriculture, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; (X.Z.); (H.X.); (X.F.); (H.C.)
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17
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Singh U, Akhtar O, Mishra R, Zoomi I, Kehri HK, Pandey D. Arbuscular Mycorrhizal Fungi: Biodiversity, Interaction with Plants, and Potential Applications. Fungal Biol 2021. [DOI: 10.1007/978-3-030-67561-5_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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18
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Rani M, Jogawat A, Loha A. Sugar Transporters in Plant–Fungal Symbiosis. Fungal Biol 2021. [DOI: 10.1007/978-3-030-60659-6_14] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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19
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Ingraffia R, Amato G, Sosa-Hernández MA, Frenda AS, Rillig MC, Giambalvo D. Nitrogen Type and Availability Drive Mycorrhizal Effects on Wheat Performance, Nitrogen Uptake and Recovery, and Production Sustainability. FRONTIERS IN PLANT SCIENCE 2020; 11:760. [PMID: 32636854 PMCID: PMC7318877 DOI: 10.3389/fpls.2020.00760] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 05/13/2020] [Indexed: 05/23/2023]
Abstract
Plant performance is strongly dependent on nitrogen (N), and thus increasing N nutrition is of great relevance for the productivity of agroecosystems. The effects of arbuscular mycorrhizal (AM) fungi on plant N acquisition are debated because contradictory results have been reported. Using 15N-labeled fertilizers as a tracer, we evaluated the effects of AM fungi on N uptake and recovery from mineral or organic sources in durum wheat. Under sufficient N availability, AM fungi had no effects on plant biomass but increased N concentrations in plant tissue, plant N uptake, and total N recovered from the fertilizer. In N-deficient soil, AM fungi led to decreased aboveground biomass, which suggests that plants and AM fungi may have competed for N. When the organic source had a low C:N ratio, AM fungi favored both plant N uptake and N recovery. In contrast, when the organic source had a high C:N ratio, a clear reduction in N recovery from the fertilizer was observed. Overall, the results indicate an active role of arbuscular mycorrhizae in favoring plant N-related traits when N is not a limiting factor and show that these fungi help in N recovery from the fertilizer. These results hold great potential for increasing the sustainability of durum wheat production.
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Affiliation(s)
- Rosolino Ingraffia
- Department of Agricultural, Food and Forest Sciences, Università degli Studi di Palermo, Palermo, Italy
| | - Gaetano Amato
- Department of Agricultural, Food and Forest Sciences, Università degli Studi di Palermo, Palermo, Italy
| | - Moisés A Sosa-Hernández
- Plant Ecology, Institute of Biology, Freie Universität Berlin, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research, Berlin, Germany
| | - Alfonso S Frenda
- Department of Agricultural, Food and Forest Sciences, Università degli Studi di Palermo, Palermo, Italy
| | - Matthias C Rillig
- Plant Ecology, Institute of Biology, Freie Universität Berlin, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research, Berlin, Germany
| | - Dario Giambalvo
- Department of Agricultural, Food and Forest Sciences, Università degli Studi di Palermo, Palermo, Italy
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Zhu X, Li X, Xing F, Chen C, Huang G, Gao Y. Interaction Between Root Exudates of the Poisonous Plant Stellera chamaejasme L. and Arbuscular Mycorrhizal Fungi on the Growth of Leymus chinensis (Trin.) Tzvel. Microorganisms 2020; 8:microorganisms8030364. [PMID: 32143469 PMCID: PMC7142538 DOI: 10.3390/microorganisms8030364] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2020] [Revised: 02/26/2020] [Accepted: 02/28/2020] [Indexed: 12/02/2022] Open
Abstract
The growth of a large number of poisonous plants is an indicator of grassland degradation. Releasing allelochemicals through root exudates is one of the strategies with which poisonous plants affect neighboring plants in nature. Arbuscular mycorrhizal fungi (AMF) can form a mutualistic symbiosis with most of the higher plants. However, the manner of interaction between root exudates of poisonous plants and AMF on neighboring herbage in grasslands remains poorly understood. Stellera chamaejasme L., a common poisonous plant with approved allelopathy, is widely distributed with the dominant grass of Leymus chinensis in the degradeds of Northern China. In this study, we investigated the addition of S. chamaejasme root exudates (SRE), the inoculation of AMF, and their interaction on the growth and tissue nitrogen contents of L. chinensis, the characteristics of rhizosphere AMF, and soil physicochemical properties. Results showed that SRE had significant effects on ramet number, aboveground biomass, and total nitrogen of L. chinensis in a concentration dependent manner. Additionally, SRE had a significant negative effect on the rate of mycorrhiza infection and spore density of the AMF. Meanwhile, the addition of SRE significantly affected soil pH, electrical conductivity, available nitrogen (AN), available phosphorus (AP), total nitrogen (TN), and total carbon (TC) contents; while neither inoculation of AMF itself nor the interaction of AMF with SRE significantly affected the growth of L. chinensis. The interaction between AMF and SRE dramatically changed the pH, AP, and TC of rhizosphere soil. Therefore, we suggested SRE of S. chamaejasme affected the growth of L. chinensis by altering soil pH and nutrient availability. AMF could change the effect of SRE on soil nutrients and have the potential to regulate the allelopathic effects of S. chamaejasme and the interspecific interaction between the two plant species. We have provided new evidence for the allelopathic mechanism of S. chamaejasme and the regulation effects of AMF on the interspecific relationship between poisonous plants and neighboring plants. Our findings reveal the complex interplay between the root exudates of poisonous plants and rhizosphere AMF in regulating population growth and dynamics of neighboring plants in degraded grassland ecosystems.
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Affiliation(s)
- Xinrui Zhu
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
| | - Xiaote Li
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
| | - Fu Xing
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
- Correspondence: (F.X.); (Y.G.)
| | - Chen Chen
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
| | - Guohui Huang
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
| | - Ying Gao
- Institute of Grassland Science, Northeast Normal University, Changchun 130024, China; (X.Z.); (X.L.); (C.C.); (G.H.)
- Key Laboratory of Vegetation Ecology, Ministry of Education, Changchun 130024, China
- Correspondence: (F.X.); (Y.G.)
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A Whole-Plant Culture Method to Study Structural and Functional Traits of Extraradical Mycelium. Methods Mol Biol 2020; 2146:33-41. [PMID: 32415593 DOI: 10.1007/978-1-0716-0603-2_3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
An in vivo whole-plant bi-dimensional experimental system has been devised and tested with different host plants, in order to obtain extraradical mycelium (ERM) produced by different arbuscular mycorrhizal fungi (AMF). In this system, a host plant germling is inoculated with AMF to establish mycorrhizal symbiosis, and, after colonization, newly formed extraradical hyphae and spores are removed. Then the mycorrhizal root system is wrapped in a nylon net and placed between membranes in a Petri dish, allowing ERM to grow on the membrane surface. Such extraradical hyphae may be used for in situ morphometric analyses or collected for molecular or biochemical assays: in the latter case, the plant with its root sandwich may be reassembled to renew mycelium production. In this experimental system, which was tested with diverse host plant species and lines, values of explored membrane surface areas and densities of ERM showed wide ranges of variation, and its length ranged from 9.7 ± 2.0 to 48.8 ± 9.9 m per plant, depending on host and AMF identity. Across the different plant-AMF combinations tested, the whole-plant system produced 2.0 ± 0.6 to 5.3 ± 0.3 mg of ERM fresh biomass per plant per harvest. This experimental system can be used for a wide range of AMF and host plants species, either establishing arbuscular mycorrhizas or other mycorrhizal interactions. ERM produced and collected in the whole-plant system is suitable for morphological, physiological, and molecular analyses, facilitating studies on the different aspects of mycorrhizal symbiotic interactions.
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22
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Laser Microdissection as a Useful Tool to Study Gene Expression in Plant and Fungal Partners in AM Symbiosis. Methods Mol Biol 2020; 2146:171-184. [PMID: 32415603 DOI: 10.1007/978-1-0716-0603-2_13] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Laser microdissection (LMD) technology has been widely applied to plant tissues, offering novel information on the role of different cell-type populations during plant-microbe interactions. In this chapter, protocols to apply the LMD approach to study plant and fungal transcript profiles in different cell-type populations from arbuscular mycorrhizal (AM) roots are described in detail, starting from the biological material preparation to gene expression analyses by RT-PCR and RT-qPCR.
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Calabrese S, Cusant L, Sarazin A, Niehl A, Erban A, Brulé D, Recorbet G, Wipf D, Roux C, Kopka J, Boller T, Courty PE. Imbalanced Regulation of Fungal Nutrient Transports According to Phosphate Availability in a Symbiocosm Formed by Poplar, Sorghum, and Rhizophagus irregularis. FRONTIERS IN PLANT SCIENCE 2019; 10:1617. [PMID: 31921260 PMCID: PMC6920215 DOI: 10.3389/fpls.2019.01617] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Accepted: 11/18/2019] [Indexed: 05/05/2023]
Abstract
In arbuscular mycorrhizal (AM) symbiosis, key components of nutrient uptake and exchange are specialized transporters that facilitate nutrient transport across membranes. As phosphate is a nutrient and a regulator of nutrient exchanges, we investigated the effect of P availability to extraradical mycelium (ERM) on both plant and fungus transcriptomes and metabolomes in a symbiocosm system. By perturbing nutrient exchanges under the control of P, our objectives were to identify new fungal genes involved in nutrient transports, and to characterize in which extent the fungus differentially modulates its metabolism when interacting with two different plant species. We performed transportome analysis on the ERM and intraradical mycelium of the AM fungus Rhizophagus irregularis associated to Populus trichocarpa and Sorghum bicolor under high and low P availability in ERM, using quantitative RT-PCR and Illumina mRNA-sequencing. We observed that mycorrhizal symbiosis induces expression of specific phosphate and ammonium transporters in both plants. Furthermore, we identified new AM-inducible transporters and showed that a subset of phosphate transporters is regulated independently of symbiotic nutrient exchange. mRNA-Sequencing revealed that the fungal transportome was not similarly regulated in the two host plant species according to P availability. Mirroring this effect, many plant carbohydrate transporters were down-regulated in P. trichocarpa mycorrhizal root tissue. Metabolome analysis revealed further that AM root colonization led to a modification of root primary metabolism under low and high P availability and to a decrease of primary metabolite pools in general. Moreover, the down regulation of the sucrose transporters suggests that the plant limits carbohydrate long distance transport (i.e. from shoot to the mycorrhizal roots). By simultaneous uptake/reuptake of nutrients from the apoplast at the biotrophic interface, plant and fungus are both able to control reciprocal nutrient fluxes.
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Affiliation(s)
- Silvia Calabrese
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Basel, Switzerland
| | - Loic Cusant
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, UPS, CNRS, Castanet-Tolosan, France
| | - Alexis Sarazin
- Department of Biology at the Swiss Federal Institute of Technology Zurich, Zurich, Switzerland
| | - Annette Niehl
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Basel, Switzerland
| | - Alexander Erban
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Daphnée Brulé
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Basel, Switzerland
- Agroécologie, AgroSup Dijon, CNRS, INRAE, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Ghislaine Recorbet
- Agroécologie, AgroSup Dijon, CNRS, INRAE, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Daniel Wipf
- Agroécologie, AgroSup Dijon, CNRS, INRAE, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Christophe Roux
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, UPS, CNRS, Castanet-Tolosan, France
| | - Joachim Kopka
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Thomas Boller
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Basel, Switzerland
| | - Pierre-Emmanuel Courty
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Basel, Switzerland
- Agroécologie, AgroSup Dijon, CNRS, INRAE, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
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24
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Moonjely S, Zhang X, Fang W, Bidochka MJ. Metarhizium robertsii ammonium permeases (MepC and Mep2) contribute to rhizoplane colonization and modulates the transfer of insect derived nitrogen to plants. PLoS One 2019; 14:e0223718. [PMID: 31618269 PMCID: PMC6795453 DOI: 10.1371/journal.pone.0223718] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Accepted: 09/26/2019] [Indexed: 12/14/2022] Open
Abstract
The endophytic insect pathogenic fungi (EIPF) Metarhizium promotes plant growth through symbiotic association and the transfer of insect-derived nitrogen. However, little is known about the genes involved in this association and the transfer of nitrogen. In this study, we assessed the involvement of six Metarhizium robertsii genes in endophytic, rhizoplane and rhizospheric colonization with barley roots. Two ammonium permeases (MepC and Mep2) and a urease, were selected since homologous genes in arbuscular mycorrhizal fungi were reported to play a pivotal role in nitrogen mobilization during plant root colonization. Three other genes were selected on the basis on RNA-Seq data that showed high expression levels on bean roots, and these encoded a hydrophobin (Hyd3), a subtilisin-like serine protease (Pr1A) and a hypothetical protein. The root colonization assays revealed that the deletion of urease, hydrophobin, subtilisin-like serine protease and hypothetical protein genes had no impact on endophytic, rhizoplane and rhizospheric colonization at 10 or 20 days. However, the deletion of MepC resulted in significantly increased rhizoplane colonization at 10 days whereas ΔMep2 showed increased rhizoplane colonization at 20 days. In addition, the nitrogen transporter mutants also showed significantly higher 15N incorporation of insect derived nitrogen in barley leaves in the presence of nutrients. Insect pathogenesis assay revealed that disruption of MepC, Mep2, urease did not reduce virulence toward insects. The enhanced rhizoplane colonization of ΔMep2 and ΔMepC and insect derived nitrogen transfer to plant hosts suggests the role of MepC and Mep2 in Metarhizium-plant symbiosis.
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Affiliation(s)
- Soumya Moonjely
- Department of Biological Sciences, Brock University, St. Catharines, ON Canada
| | - Xing Zhang
- Institute of Microbiology, Zhejiang University, Hangzhou, China
| | - Weiguo Fang
- Institute of Microbiology, Zhejiang University, Hangzhou, China
| | - Michael J Bidochka
- Department of Biological Sciences, Brock University, St. Catharines, ON Canada
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25
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Kameoka H, Maeda T, Okuma N, Kawaguchi M. Structure-Specific Regulation of Nutrient Transport and Metabolism in Arbuscular Mycorrhizal Fungi. PLANT & CELL PHYSIOLOGY 2019; 60:2272-2281. [PMID: 31241164 DOI: 10.1093/pcp/pcz122] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2019] [Accepted: 06/14/2019] [Indexed: 06/09/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) establish symbiotic relationships with most land plants, mainly for the purpose of nutrient exchange. Many studies have revealed the regulation of processes in AMF, such as nutrient absorption from soil, metabolism and exchange with host plants, and the genes involved. However, the spatial regulation of the genes within the structures comprising each developmental stage is not well understood. Here, we demonstrate the structure-specific transcriptome of the model AMF species, Rhizophagus irregularis. We performed an ultra-low input RNA-seq analysis, SMART-seq2, comparing five extraradical structures, germ tubes, runner hyphae, branched absorbing structures (BAS), immature spores and mature spores. In addition, we reanalyzed the recently reported RNA-seq data comparing intraradical mycelium and arbuscule. Our analyses captured the distinct features of each structure and revealed the structure-specific expression patterns of genes related to nutrient transport and metabolism. Of note, the transcriptional profiles suggest distinct functions of BAS in nutrient absorption. These findings provide a comprehensive dataset to advance our understanding of the transcriptional dynamics of fungal nutrition in this symbiotic system.
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Affiliation(s)
- Hiromu Kameoka
- Division of Symbiotic Systems, National Institute for Basic Biology, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, Japan
| | - Taro Maeda
- Division of Symbiotic Systems, National Institute for Basic Biology, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, Japan
| | - Nao Okuma
- The Graduate University for Advanced Studies, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, Japan
| | - Masayoshi Kawaguchi
- Division of Symbiotic Systems, National Institute for Basic Biology, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, Japan
- The Graduate University for Advanced Studies, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, Japan
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26
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Wipf D, Krajinski F, van Tuinen D, Recorbet G, Courty PE. Trading on the arbuscular mycorrhiza market: from arbuscules to common mycorrhizal networks. THE NEW PHYTOLOGIST 2019; 223:1127-1142. [PMID: 30843207 DOI: 10.1111/nph.15775] [Citation(s) in RCA: 141] [Impact Index Per Article: 28.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Accepted: 02/20/2019] [Indexed: 05/08/2023]
Abstract
Arbuscular mycorrhiza (AM) symbiosis occurs between obligate biotrophic fungi of the phylum Glomeromycota and most land plants. The exchange of nutrients between host plants and AM fungi (AMF) is presumed to be the main benefit for the two symbiotic partners. In this review article, we outline the current concepts of nutrient exchanges within this symbiosis (mechanisms and regulation). First, we focus on phosphorus and nitrogen transfer from the fungal partner to the host plant, and on the reciprocal transfer of carbon compounds, with a highlight on a possible interplay between nitrogen and phosphorus nutrition during AM symbiosis. We further discuss potential mechanisms of regulation of these nutrient exchanges linked to membrane dynamics. The review finally addresses the common mycorrhizal networks formed AMF, which interconnect plants from similar and/or different species. Finally the best way to integrate this knowledge and the ensuing potential benefits of AM into sustainable agriculture is discussed.
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Affiliation(s)
- Daniel Wipf
- Agroécologie, AgroSup Dijon, CNRS, Univ. Bourgogne, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Franziska Krajinski
- Institute of Biology, Faculty of Life Sciences, Leipzig University, Johannisallee 21-23, 04103, Leipzig, Germany
| | - Diederik van Tuinen
- Agroécologie, AgroSup Dijon, CNRS, Univ. Bourgogne, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Ghislaine Recorbet
- Agroécologie, AgroSup Dijon, CNRS, Univ. Bourgogne, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Pierre-Emmanuel Courty
- Agroécologie, AgroSup Dijon, CNRS, Univ. Bourgogne, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
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27
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Fernández I, Cosme M, Stringlis IA, Yu K, de Jonge R, van Wees SM, Pozo MJ, Pieterse CMJ, van der Heijden MGA. Molecular dialogue between arbuscular mycorrhizal fungi and the nonhost plant Arabidopsis thaliana switches from initial detection to antagonism. THE NEW PHYTOLOGIST 2019; 223:867-881. [PMID: 30883790 DOI: 10.1111/nph.15798] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2019] [Accepted: 03/11/2019] [Indexed: 06/09/2023]
Abstract
Approximately 29% of all vascular plant species are unable to establish an arbuscular mycorrhizal (AM) symbiosis. Despite this, AM fungi (Rhizophagus spp.) are enriched in the root microbiome of the nonhost Arabidopsis thaliana, and Arabidopsis roots become colonized when AM networks nurtured by host plants are available. Here, we investigated the nonhost-AM fungus interaction by analyzing transcriptional changes in Rhizophagus, Arabidopsis and the host plant Medicago truncatula while growing in the same mycorrhizal network. In early interaction stages, Rhizophagus activated the Arabidopsis strigolactone biosynthesis genes CCD7 and CCD8, suggesting that detection of AM fungi is not completely impaired. However, in colonized Arabidopsis roots, fungal nutrient transporter genes GintPT, GintAMT2, GintMST2 and GintMST4, essential for AM symbiosis, were not activated. RNA-seq transcriptome analysis pointed to activation of costly defenses in colonized Arabidopsis roots. Moreover, Rhizophagus colonization caused a 50% reduction in shoot biomass, but also led to enhanced systemic immunity against Botrytis cinerea. This suggests that early signaling between AM fungi and Arabidopsis is not completely impaired and that incompatibility appears at later interaction stages. Moreover, Rhizophagus-mediated defenses coincide with reduced Arabidopsis growth, but also with systemic disease resistance, highlighting the multifunctional role of AM fungi in host and nonhost interactions.
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Affiliation(s)
- Iván Fernández
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Marco Cosme
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Ioannis A Stringlis
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Ke Yu
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Ronnie de Jonge
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, B-9052, Belgium
- VIB Center for Plant Systems Biology, Ghent, B-9052, Belgium
| | - SaskiaC M van Wees
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Maria J Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (CSIC), Granada, 18008, Spain
| | - Corné M J Pieterse
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
| | - Marcel G A van der Heijden
- Plant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, 3508 TB, Utrecht, the Netherlands
- Plant-Soil-Interactions, Agroscope, Zürich, 8046, Switzerland
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28
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Gómez-Gallego T, Benabdellah K, Merlos MA, Jiménez-Jiménez AM, Alcon C, Berthomieu P, Ferrol N. The Rhizophagus irregularis Genome Encodes Two CTR Copper Transporters That Mediate Cu Import Into the Cytosol and a CTR-Like Protein Likely Involved in Copper Tolerance. FRONTIERS IN PLANT SCIENCE 2019; 10:604. [PMID: 31156674 PMCID: PMC6531763 DOI: 10.3389/fpls.2019.00604] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Accepted: 04/24/2019] [Indexed: 05/31/2023]
Abstract
Arbuscular mycorrhizal fungi increase fitness of their host plants under Cu deficient and toxic conditions. In this study, we have characterized two Cu transporters of the CTR family (RiCTR1 and RiCTR2) and a CTR-like protein (RiCTR3A) of Rhizophagus irregularis. Functional analyses in yeast revealed that RiCTR1 encodes a plasma membrane Cu transporter, RiCTR2 a vacuolar Cu transporter and RiCTR3A a plasma membrane protein involved in Cu tolerance. RiCTR1 was more highly expressed in the extraradical mycelia (ERM) and RiCTR2 in the intraradical mycelia (IRM). In the ERM, RiCTR1 expression was up-regulated by Cu deficiency and down-regulated by Cu toxicity. RiCTR2 expression increased only in the ERM grown under severe Cu-deficient conditions. These data suggest that RiCTR1 is involved in Cu uptake by the ERM and RiCTR2 in mobilization of vacuolar Cu stores. Cu deficiency decreased mycorrhizal colonization and arbuscule frequency, but increased RiCTR1 and RiCTR2 expression in the IRM, which suggest that the IRM has a high Cu demand. The two alternatively spliced products of RiCTR3, RiCTR3A and RiCTR3B, were more highly expressed in the ERM. Up-regulation of RiCTR3A by Cu toxicity and the yeast complementation assays suggest that RiCTR3A might function as a Cu receptor involved in Cu tolerance.
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Affiliation(s)
- Tamara Gómez-Gallego
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain
| | - Karim Benabdellah
- Genomic Medicine Department, GENYO, Centre for Genomics and Oncological Research, Pfizer-University of Granada-Andalusian Regional Government, Granada, Spain
| | - Miguel A. Merlos
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain
| | - Ana M. Jiménez-Jiménez
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain
| | - Carine Alcon
- Biochimie et Physiologie Moléculaire des Plantes, Institut National de la Recherche Agronomique, Centre National de la Recherche Scientifique, Université de Montpellier, Montpellier SupAgro, Montpellier, France
| | - Pierre Berthomieu
- Biochimie et Physiologie Moléculaire des Plantes, Institut National de la Recherche Agronomique, Centre National de la Recherche Scientifique, Université de Montpellier, Montpellier SupAgro, Montpellier, France
| | - Nuria Ferrol
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain
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29
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Arbuscular Mycorrhizal Fungi Alleviate Soil Salinity Stress in Arid and Semiarid Areas. SOIL BIOLOGY 2019. [DOI: 10.1007/978-3-030-18975-4_16] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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30
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Wang R, Wang M, Chen K, Wang S, Mur LAJ, Guo S. Exploring the Roles of Aquaporins in Plant⁻Microbe Interactions. Cells 2018; 7:E267. [PMID: 30545006 PMCID: PMC6316839 DOI: 10.3390/cells7120267] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Revised: 11/23/2018] [Accepted: 12/06/2018] [Indexed: 11/16/2022] Open
Abstract
Aquaporins (AQPs) are membrane channel proteins regulating the flux of water and other various small solutes across membranes. Significant progress has been made in understanding the roles of AQPs in plants' physiological processes, and now their activities in various plant⁻microbe interactions are receiving more attention. This review summarizes the various roles of different AQPs during interactions with microbes which have positive and negative consequences on the host plants. In positive plant⁻microbe interactions involving rhizobia, arbuscular mycorrhizae (AM), and plant growth-promoting rhizobacteria (PGPR), AQPs play important roles in nitrogen fixation, nutrient transport, improving water status, and increasing abiotic stress tolerance. For negative interactions resulting in pathogenesis, AQPs help plants resist infections by preventing pathogen ingress by influencing stomata opening and influencing defensive signaling pathways, especially through regulating systemic acquired resistance. Interactions with bacterial or viral pathogens can be directly perturbed through direct interaction of AQPs with harpins or replicase. However, whilst these observations indicate the importance of AQPs, further work is needed to develop a fuller mechanistic understanding of their functions.
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Affiliation(s)
- Ruirui Wang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
| | - Min Wang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
| | - Kehao Chen
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
| | - Shiyu Wang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
| | - Luis Alejandro Jose Mur
- Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth SY23 3DA, UK.
| | - Shiwei Guo
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
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31
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Shi Z, Zhang J, Wang F, Li K, Yuan W, Liu J. Arbuscular mycorrhizal inoculation increases molybdenum accumulation but decreases molybdenum toxicity in maize plants grown in polluted soil. RSC Adv 2018; 8:37069-37076. [PMID: 35557779 PMCID: PMC9089312 DOI: 10.1039/c8ra07725h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Accepted: 10/29/2018] [Indexed: 11/21/2022] Open
Abstract
Molybdenum (Mo) is an important micronutrient required by both plants and microorganisms, but may become toxic when presents in excess concentration. However, Mo toxicity in soil-plant systems as influenced by arbuscular mycorrhizal (AM) fungi (AMF) still remains unknown. Here, a pot culture experiment was conducted to study the effects of inoculation with Claroideoglomus etunicatum BEG 168 on the growth and Mo content of maize plants growing in soil supplemented with different levels (0, 1000, 2000, and 4000 mg kg-1) of Mo. Results show that the added Mo had no significant effects on AM colonization rate, which ranged from 77% to 92%. Mo addition decreased plant dry weights and leaf pigment contents, as well as nutrient uptake of P, N, Fe, Mg and Cu in shoots and roots, and in most cases, the highest level (4000 mg kg-1) showed the most inhibitory effects. Overall, AM inoculation enhanced plant growth, mineral nutrient uptake, leaf pigment contents and photosynthetic rate under all Mo addition levels. Mo concentrations in plants without Mo addition ranged from 13.1 to 40.1 mg kg-1 in roots, and from 42.8 to 58.4 mg kg-1 in shoots. Addition of Mo increased Mo concentrations in both shoots and roots of all the plants, but showed no significant dose-dependent effects. In non-inoculated plants receiving Mo addition, Mo concentrations were not lower than 400 mg kg-1 in shoots and higher than 1300 mg kg-1 in roots respectively. AM inoculation further enhanced Mo concentrations in shoots and roots, but decreased shoot/root Mo ratio at 2000 and 4000 mg kg-1 Mo addition levels. In AM inoculation treatments, soil pH exhibited a decreasing trend with increasing Mo addition level. In conclusion, excess Mo caused toxicity in maize plants, while AM fungus C. etunicatum BEG 168 was tolerant to the added Mo, and could alleviate the Mo-induced phytotoxicity by improving plants' mineral nutrition, leaf pigment contents and photosynthetic properties, and by mediating Mo partitioning in plants and soil pH. Our present results suggest a specific protection mechanism exists in AM plants against excess Mo, and their promising potential in ecological restoration and phytoremediation of Mo-polluted sites.
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Affiliation(s)
- Zhaoyong Shi
- College of Agriculture, Henan University of Science and Technology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Plant Nutrition and Environmental Ecology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Symbiotic Microorganism and Green Development Luoyang Henan Province 471023 P. R. China
| | - Jiacheng Zhang
- College of Agriculture, Henan University of Science and Technology Luoyang Henan Province 471023 P. R. China
| | - Fayuan Wang
- College of Environment and Safety Engineering, Qingdao University of Science and Technology Qingdao Shandong Province 266042 P. R. China
- Key Laboratory of Soil Resources and Environment in Qianbei of Guizhou Province, Zunyi Normal University Zunyi Guizhou Province 563002 P. R. China
| | - Ke Li
- College of Agriculture, Henan University of Science and Technology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Plant Nutrition and Environmental Ecology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Symbiotic Microorganism and Green Development Luoyang Henan Province 471023 P. R. China
| | - Weikang Yuan
- College of Agriculture, Henan University of Science and Technology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Plant Nutrition and Environmental Ecology Luoyang Henan Province 471023 P. R. China
- Luoyang Key Laboratory of Symbiotic Microorganism and Green Development Luoyang Henan Province 471023 P. R. China
| | - Jianbo Liu
- College of Environment and Safety Engineering, Qingdao University of Science and Technology Qingdao Shandong Province 266042 P. R. China
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32
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Tamayo E, Knight SAB, Valderas A, Dancis A, Ferrol N. The arbuscular mycorrhizal fungus Rhizophagus irregularis
uses a reductive iron assimilation pathway for high-affinity iron uptake. Environ Microbiol 2018; 20:1857-1872. [DOI: 10.1111/1462-2920.14121] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Accepted: 03/26/2018] [Indexed: 12/12/2022]
Affiliation(s)
- Elisabeth Tamayo
- Departamento de Microbiología del Suelo y Sistemas Simbióticos; Estación Experimental del Zaidín, CSIC; Granada Spain
| | - Simon A. B. Knight
- Department of Medicine, Division of Hematology-Oncology; Perelman School of Medicine, University of Pennsylvania; Philadelphia PA USA
| | - Ascensión Valderas
- Departamento de Microbiología del Suelo y Sistemas Simbióticos; Estación Experimental del Zaidín, CSIC; Granada Spain
| | - Andrew Dancis
- Department of Medicine, Division of Hematology-Oncology; Perelman School of Medicine, University of Pennsylvania; Philadelphia PA USA
| | - Nuria Ferrol
- Departamento de Microbiología del Suelo y Sistemas Simbióticos; Estación Experimental del Zaidín, CSIC; Granada Spain
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33
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Sánchez-Bel P, Sanmartín N, Pastor V, Mateu D, Cerezo M, Vidal-Albalat A, Pastor-Fernández J, Pozo MJ, Flors V. Mycorrhizal tomato plants fine tunes the growth-defence balance upon N depleted root environments. PLANT, CELL & ENVIRONMENT 2018; 41:406-420. [PMID: 29194658 DOI: 10.1111/pce.13105] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2017] [Revised: 11/07/2017] [Accepted: 11/13/2017] [Indexed: 05/06/2023]
Abstract
In low nutritive environments, the uptake of N by arbuscular mycorrhizal (AM) fungi may confer competitive advantages for the host. The present study aims to understand how mycorrhizal tomato plants perceive and then prepare for an N depletion in the root environment. Plants colonized by Rhizophagus irregularis displayed improved responses to a lack of N than nonmycorrhizal (NM) plants. These responses were accomplished by a complex metabolic and transcriptional rearrangement that mostly affected the gibberellic acid and jasmonic acid pathways involving DELLA and JAZ1 genes, which were responsive to changes in the C/N imbalance of the plant. N starved mycorrhizal plants showed lower C/N equilibrium in the shoots than starved NM plants and concomitantly a downregulation of the JAZ1 repressor and the increased expression of the DELLA gene, which translated into a more active oxylipin pathway in mycorrhizal plants. In addition, the results support a priorization in AM plants of stress responses over growth. Therefore, these plants were better prepared for an expected stress. Furthermore, most metabolites that were severely reduced in NM plants following the N depletion remained unaltered in starved AM plants compared with those normally fertilized, suggesting that the symbiosis buffered the stress, improving plant development in a stressed environment.
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Affiliation(s)
- P Sánchez-Bel
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - N Sanmartín
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - V Pastor
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - D Mateu
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - M Cerezo
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - A Vidal-Albalat
- Departament de Química Inorgànica i Orgànica, Universitat Jaume I, Castellón, 12071, Spain
| | - J Pastor-Fernández
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
| | - M J Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (CSIC), Granada, 18160, Spain
| | - V Flors
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (EEZ-CSIC)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Castellón, 12071, Spain
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Chen A, Gu M, Wang S, Chen J, Xu G. Transport properties and regulatory roles of nitrogen in arbuscular mycorrhizal symbiosis. Semin Cell Dev Biol 2018. [DOI: 10.1016/j.semcdb.2017.06.015] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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Drechsler N, Courty PE, Brulé D, Kunze R. Identification of arbuscular mycorrhiza-inducible Nitrate Transporter 1/Peptide Transporter Family (NPF) genes in rice. MYCORRHIZA 2018; 28:93-100. [PMID: 28993893 DOI: 10.1007/s00572-017-0802-z] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Accepted: 10/04/2017] [Indexed: 05/17/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) colonize up to 90% of all land plants and facilitate the acquisition of mineral nutrients by their hosts. Inorganic orthophosphate (Pi) and nitrogen (N) are the major nutrients transferred from the fungi to plants. While plant Pi transporters involved in nutrient transfer at the plant-fungal interface have been well studied, the plant N transporters participating in this process are largely unknown except for some ammonium transporters (AMT) specifically assigned to arbuscule-colonized cortical cells. In plants, many nitrate transporter 1/peptide transporter family (NPF) members are involved in the translocation of nitrogenous compounds including nitrate, amino acids, peptides and plant hormones. Whether NPF members respond to AMF colonization, however, is not yet known. Here, we investigated the transcriptional regulation of 82 rice (Oryza sativa) NPF genes in response to colonization by the AMF Rhizophagus irregularis in roots of plants grown under five different nutrition regimes. Expression of the four OsNPF genes NPF2.2/PTR2, NPF1.3, NPF6.4 and NPF4.12 was strongly induced in mycorrhizal roots and depended on the composition of the fertilizer solution, nominating them as interesting candidates for nutrient signaling and exchange processes at the plant-fungal interface.
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Affiliation(s)
- Navina Drechsler
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Freie Universität Berlin, 14195, Berlin, Germany
| | - Pierre-Emmanuel Courty
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France
| | - Daphnée Brulé
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France
| | - Reinhard Kunze
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Freie Universität Berlin, 14195, Berlin, Germany.
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36
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Liese R, Lübbe T, Albers NW, Meier IC. The mycorrhizal type governs root exudation and nitrogen uptake of temperate tree species. TREE PHYSIOLOGY 2018; 38:83-95. [PMID: 29126247 DOI: 10.1093/treephys/tpx131] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Accepted: 09/25/2017] [Indexed: 06/07/2023]
Abstract
Even though the two dominant mycorrhizal associations of temperate tree species differentially couple carbon (C) and nitrogen (N) cycles in temperate forests, systematic differences between the biogeochemical cycles of arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) tree species remain poorly described. A classification according to the mycorrhizal type offers the chance, though, to develop a global frame concept for the prediction of temperate ecosystem responses to environmental change. Focusing on the influence of mycorrhizal types on two key plant processes of biogeochemical cycling (root exudation and N acquisition), we investigated four temperate deciduous tree species per mycorrhizal type in a drought experiment in large mesocosms. We hypothesized that (H1) C loss by root exudation is higher in ECM than in AM trees, (H2) drought leads to higher reductions in root exudation of drought-sensitive ECM trees and (H3) inorganic N uptake is higher in AM than in ECM trees. In contradiction to H2, we found no systematic difference in root exudation between the mycorrhizal types at ample soil moisture, but almost twofold higher exudation in ECM trees when exposed to soil drought. In addition, photosynthetic C cost of root exudation strongly increased by ~10-fold in drought-treated ECM trees, while it only doubled in AM trees, which confirms H1. With respect to H3, we corroborated that AM trees had higher absolute and relative inorganic N acquisition rates than ECM trees, while the organic N uptake did not differ between mycorrhizal types. We conclude that ECM trees are less efficient in inorganic N uptake than AM trees, but ECM trees increase root C release as an adaptive response to dry soil to maintain hydraulic conductivity and/or nutrient availability. These systematic differences in key biogeochemical processes support hints on the key role of the mycorrhizal types in coupling C and N cycles in temperate forests.
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Affiliation(s)
- Rebecca Liese
- Plant Ecology, Albrecht-von-Haller Institute for Plant Sciences, University of Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany
| | - Torben Lübbe
- Plant Ecology, Albrecht-von-Haller Institute for Plant Sciences, University of Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany
| | - Nora W Albers
- Plant Ecology, Albrecht-von-Haller Institute for Plant Sciences, University of Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany
| | - Ina C Meier
- Plant Ecology, Albrecht-von-Haller Institute for Plant Sciences, University of Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany
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Fochi V, Falla N, Girlanda M, Perotto S, Balestrini R. Cell-specific expression of plant nutrient transporter genes in orchid mycorrhizae. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 263:39-45. [PMID: 28818382 DOI: 10.1016/j.plantsci.2017.06.015] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Accepted: 06/14/2017] [Indexed: 05/03/2023]
Abstract
Orchid mycorrhizal protocorms and roots are heterogeneous structures composed of different plant cell-types, where cells colonized by intracellular fungal coils (the pelotons) are close to non-colonized plant cells. Moreover, the fungal coils undergo rapid turnover inside the colonized cells, so that plant cells containing coils at different developmental stages can be observed in the same tissue section. Here, we have investigated by laser microdissection (LMD) the localization of specific plant gene transcripts in different cell-type populations collected from mycorrhizal protocorms and roots of the Mediterranean orchid Serapias vomeracea colonized by Tulasnella calospora. RNAs extracted from the different cell-type populations have been used to study plant gene expression, focusing on genes potentially involved in N uptake and transport and previously identified as up-regulated in symbiotic protocorms. Results clearly showed that some plant N transporters are differentially expressed in cells containing fungal coils at different developmental stages, as well as in non-colonized cells, and allowed the identification of new functional markers associated to coil-containing cells.
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Affiliation(s)
- Valeria Fochi
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli, 25, 10125 Torino, Italy; CNR-Istituto per la Protezione Sostenibile delle Piante (IPSP), Viale Mattioli, 25, 10125 Torino, Italy
| | - Nicole Falla
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli, 25, 10125 Torino, Italy
| | - Mariangela Girlanda
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli, 25, 10125 Torino, Italy; CNR-Istituto per la Protezione Sostenibile delle Piante (IPSP), Viale Mattioli, 25, 10125 Torino, Italy
| | - Silvia Perotto
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli, 25, 10125 Torino, Italy; CNR-Istituto per la Protezione Sostenibile delle Piante (IPSP), Viale Mattioli, 25, 10125 Torino, Italy.
| | - Raffaella Balestrini
- CNR-Istituto per la Protezione Sostenibile delle Piante (IPSP), Viale Mattioli, 25, 10125 Torino, Italy.
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38
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Pepe A, Sbrana C, Ferrol N, Giovannetti M. An in vivo whole-plant experimental system for the analysis of gene expression in extraradical mycorrhizal mycelium. MYCORRHIZA 2017; 27:659-668. [PMID: 28573458 DOI: 10.1007/s00572-017-0779-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2017] [Accepted: 05/16/2017] [Indexed: 05/09/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) establish beneficial mutualistic symbioses with land plants, receiving carbon in exchange for mineral nutrients absorbed by the extraradical mycelium (ERM). With the aim of obtaining in vivo produced ERM for gene expression analyses, a whole-plant bi-dimensional experimental system was devised and tested with three host plants and three fungal symbionts. In such a system, Funneliformis mosseae in symbiosis with Cichorium intybus var. foliosum, Lactuca sativa, and Medicago sativa produced ERM whose lengths ranged from 9.8 ± 0.8 to 20.8 ± 1.2 m per plant. Since ERM produced in symbiosis with C. intybus showed the highest values for the different structural parameters assessed, this host was used to test the whole-plant system with F. mosseae, Rhizoglomus irregulare, and Funneliformis coronatus. The whole-plant system yielded 1-7 mg of ERM fresh biomass per plant per harvest, and continued producing new ERM for 6 months. Variable amounts of high-quality and intact total RNA, ranging from 15 to 65 μg RNA/mg ERM fresh weight, were extracted from the ERM of the three AMF isolates. Ammonium transporter gene expression was successfully determined in the cDNAs obtained from ERM of the three fungal symbionts by RT-qPCR using gene-specific primers designed on available (R. irregulare) and new (F. mosseae and F. coronatus) ammonium transporter gene sequences. The whole-plant experimental system represents a useful research tool for large production and easy collection of ERM for morphological, physiological, and biochemical analyses, suitable for a wide variety of AMF species, for a virtually limitless range of host plants and for studies involving diverse symbiotic interactions.
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Affiliation(s)
- Alessandra Pepe
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124, Pisa, Italy
| | - Cristiana Sbrana
- CNR, Institute of Agricultural Biology and Biotechnology, UOS Pisa, Via del Borghetto 80, 56124, Pisa, Italy
| | - Nuria Ferrol
- Departamento de Microbiologia del Suelo y Sistemas Simbioticos, Estacion Experimental del Zaidin, CSIC, Profesor Albareda 1, 18008, Granada, Spain
| | - Manuela Giovannetti
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124, Pisa, Italy.
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Koegel S, Mieulet D, Baday S, Chatagnier O, Lehmann MF, Wiemken A, Boller T, Wipf D, Bernèche S, Guiderdoni E, Courty PE. Phylogenetic, structural, and functional characterization of AMT3;1, an ammonium transporter induced by mycorrhization among model grasses. MYCORRHIZA 2017; 27:695-708. [PMID: 28667402 DOI: 10.1007/s00572-017-0786-8] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2017] [Accepted: 06/13/2017] [Indexed: 06/07/2023]
Abstract
In the arbuscular mycorrhizal (AM) symbiosis, plants satisfy part of their nitrogen (N) requirement through the AM pathway. In sorghum, the ammonium transporters (AMT) AMT3;1, and to a lesser extent AMT4, are induced in cells containing developing arbuscules. Here, we have characterized orthologs of AMT3;1 and AMT4 in four other grasses in addition to sorghum. AMT3;1 and AMT4 orthologous genes are induced in AM roots, suggesting that in the common ancestor of these five plant species, both AMT3;1 and AMT4 were already present and upregulated upon AM colonization. An artificial microRNA approach was successfully used to downregulate either AMT3;1 or AMT4 in rice. Mycorrhizal root colonization and hyphal length density of knockdown plants were not affected at that time, indicating that the manipulation did not modify the establishment of the AM symbiosis and the interaction between both partners. However, expression of the fungal phosphate transporter FmPT was significantly reduced in knockdown plants, indicating a reduction of the nutrient fluxes from the AM fungus to the plant. The AMT3;1 knockdown plants (but not the AMT4 knockdown plants) were significantly less stimulated in growth by AM fungal colonization, and uptake of both 15N and 33P from the AM fungal network was reduced. This confirms that N and phosphorus nutrition through the mycorrhizal pathway are closely linked. But most importantly, it indicates that AMT3;1 is the prime plant transporter involved in the mycorrhizal ammonium transfer and that its function during uptake of N cannot be performed by AMT4.
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Affiliation(s)
- Sally Koegel
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland
| | | | - Sefer Baday
- SIB Swiss Institute of Bioinformatics and Biozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland
- Applied Informatics Department, Informatics Institute, Istanbul Technical University, 34469, Istanbul, Turkey
| | - Odile Chatagnier
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France
| | - Moritz F Lehmann
- Department of Environmental Sciences, Aquatic and Stable Isotope Biogeochemistry, University of Basel, Basel, Switzerland
| | - Andres Wiemken
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland
| | - Thomas Boller
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland
| | - Daniel Wipf
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France
| | - Simon Bernèche
- SIB Swiss Institute of Bioinformatics and Biozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland
| | | | - Pierre-Emmanuel Courty
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse 1, 4056, Basel, Switzerland.
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
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Wang W, Shi J, Xie Q, Jiang Y, Yu N, Wang E. Nutrient Exchange and Regulation in Arbuscular Mycorrhizal Symbiosis. MOLECULAR PLANT 2017; 10:1147-1158. [PMID: 28782719 DOI: 10.1016/j.molp.2017.07.012] [Citation(s) in RCA: 190] [Impact Index Per Article: 27.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 07/29/2017] [Accepted: 07/31/2017] [Indexed: 05/19/2023]
Abstract
Most land plants form symbiotic associations with arbuscular mycorrhizal (AM) fungi. These are the most common and widespread terrestrial plant symbioses, which have a global impact on plant mineral nutrition. The establishment of AM symbiosis involves recognition of the two partners and bidirectional transport of different mineral and carbon nutrients through the symbiotic interfaces within the host root cells. Intriguingly, recent discoveries have highlighted that lipids are transferred from the plant host to AM fungus as a major carbon source. In this review, we discuss the transporter-mediated transfer of carbon, nitrogen, phosphate, potassium and sulfate, and present hypotheses pertaining to the potential regulatory mechanisms of nutrient exchange in AM symbiosis. Current challenges and future perspectives on AM symbiosis research are also discussed.
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Affiliation(s)
- Wanxiao Wang
- College of Life and Environment Sciences, Shanghai Normal University, Shanghai 200234, China; National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Jincai Shi
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Qiujin Xie
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Yina Jiang
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Nan Yu
- College of Life and Environment Sciences, Shanghai Normal University, Shanghai 200234, China.
| | - Ertao Wang
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
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Calabrese S, Kohler A, Niehl A, Veneault-Fourrey C, Boller T, Courty PE. Transcriptome analysis of the Populus trichocarpa-Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under Nitrogen Starvation. PLANT & CELL PHYSIOLOGY 2017; 58:1003-1017. [PMID: 28387868 DOI: 10.1093/pcp/pcx044] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2016] [Accepted: 03/17/2017] [Indexed: 05/21/2023]
Abstract
Nutrient transfer is a key feature of the arbuscular mycorrhizal (AM) symbiosis. Valuable mineral nutrients are transferred from the AM fungus to the plant, increasing its fitness and productivity, and, in exchange, the AM fungus receives carbohydrates as an energy source from the plant. Here, we analyzed the transcriptome of the Populus trichocarpa-Rhizophagus irregularis symbiosis using RNA-sequencing of non-mycorrhizal or mycorrhizal fine roots, with a focus on the effect of nitrogen (N) starvation. In R. irregularis, we identified 1,015 differentially expressed genes, whereby N starvation led to a general induction of gene expression. Genes of the functional classes of cell growth, membrane biogenesis and cell structural components were highly abundant. Interestingly, N starvation also led to a general induction of fungal transporters, indicating increased nutrient demand upon N starvation. In non-mycorrhizal P. trichocarpa roots, 1,341 genes were differentially expressed under N starvation. Among the 953 down-regulated genes in N starvation, most were involved in metabolic processes including amino acids, carbohydrate and inorganic ion transport, while the 342 up-regulated genes included many defense-related genes. Mycorrhization led to the up-regulation of 549 genes mainly involved in secondary metabolite biosynthesis and transport; only 24 genes were down-regulated. Mycorrhization specifically induced expression of three ammonium transporters and one phosphate transporter, independently of the N conditions, corroborating the hypothesis that these transporters are important for symbiotic nutrient exchange. In conclusion, our data establish a framework of gene expression in the two symbiotic partners under high-N and low-N conditions.
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Affiliation(s)
- Silvia Calabrese
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse, Basel, Switzerland
| | - Annegret Kohler
- INRA, UMR1136 Interactions Arbres-Microorganismes, Champenoux, France
- Université de Lorraine, UMR1136 Interactions Arbres-Microorganismes, Vandoeuvre-lès-Nancy, France
| | - Annette Niehl
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse, Basel, Switzerland
| | - Claire Veneault-Fourrey
- INRA, UMR1136 Interactions Arbres-Microorganismes, Champenoux, France
- Université de Lorraine, UMR1136 Interactions Arbres-Microorganismes, Vandoeuvre-lès-Nancy, France
| | - Thomas Boller
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse, Basel, Switzerland
| | - Pierre-Emmanuel Courty
- Department of Environmental Sciences, Botany, Zurich-Basel Plant Science Center, University of Basel, Hebelstrasse, Basel, Switzerland
- Agroécologie, AgroSupDijon, CNRS, INRA, Université de Bourgogne Franche-Comté, Dijon, France
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42
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Plant Aquaporins and Mycorrhizae: Their Regulation and Involvement in Plant Physiology and Performance. PLANT AQUAPORINS 2017. [DOI: 10.1007/978-3-319-49395-4_15] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Fochi V, Chitarra W, Kohler A, Voyron S, Singan VR, Lindquist EA, Barry KW, Girlanda M, Grigoriev IV, Martin F, Balestrini R, Perotto S. Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas. THE NEW PHYTOLOGIST 2017; 213:365-379. [PMID: 27859287 DOI: 10.1111/nph.14279] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2016] [Accepted: 09/19/2016] [Indexed: 05/03/2023]
Abstract
Orchids are highly dependent on their mycorrhizal fungal partners for nutrient supply, especially during early developmental stages. In addition to organic carbon, nitrogen (N) is probably a major nutrient transferred to the plant because orchid tissues are highly N-enriched. We know almost nothing about the N form preferentially transferred to the plant or about the key molecular determinants required for N uptake and transfer. We identified, in the genome of the orchid mycorrhizal fungus Tulasnella calospora, two functional ammonium transporters and several amino acid transporters but found no evidence of a nitrate assimilation system, in agreement with the N preference of the free-living mycelium grown on different N sources. Differential expression in symbiosis of a repertoire of fungal and plant genes involved in the transport and metabolism of N compounds suggested that organic N may be the main form transferred to the orchid host and that ammonium is taken up by the intracellular fungus from the apoplatic symbiotic interface. This is the first study addressing the genetic determinants of N uptake and transport in orchid mycorrhizas, and provides a model for nutrient exchanges at the symbiotic interface, which may guide future experiments.
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Affiliation(s)
- Valeria Fochi
- Department of Life Sciences and Systems Biology, University of Turin, 10125, Turin, Italy
- Institute for Sustainable Plant Protection (IPSP)-CNR, 10125, Turin, Italy
| | - Walter Chitarra
- Institute for Sustainable Plant Protection (IPSP)-CNR, 10125, Turin, Italy
| | - Annegret Kohler
- Lab of Excellence ARBRE, INRA-Nancy and Lorraine University, Unité Mixte de Recherche 1136, 54280, Champenoux, France
| | - Samuele Voyron
- Department of Life Sciences and Systems Biology, University of Turin, 10125, Turin, Italy
| | - Vasanth R Singan
- US Department of Energy, Joint Genome Institute, Walnut Creek, CA, 94598, USA
| | - Erika A Lindquist
- US Department of Energy, Joint Genome Institute, Walnut Creek, CA, 94598, USA
| | - Kerrie W Barry
- US Department of Energy, Joint Genome Institute, Walnut Creek, CA, 94598, USA
| | - Mariangela Girlanda
- Department of Life Sciences and Systems Biology, University of Turin, 10125, Turin, Italy
- Institute for Sustainable Plant Protection (IPSP)-CNR, 10125, Turin, Italy
| | - Igor V Grigoriev
- US Department of Energy, Joint Genome Institute, Walnut Creek, CA, 94598, USA
| | - Francis Martin
- Lab of Excellence ARBRE, INRA-Nancy and Lorraine University, Unité Mixte de Recherche 1136, 54280, Champenoux, France
| | | | - Silvia Perotto
- Department of Life Sciences and Systems Biology, University of Turin, 10125, Turin, Italy
- Institute for Sustainable Plant Protection (IPSP)-CNR, 10125, Turin, Italy
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Abstract
ABSTRACT
Mycorrhizal fungi belong to several taxa and develop mutualistic symbiotic associations with over 90% of all plant species, from liverworts to angiosperms. While descriptive approaches have dominated the initial studies of these fascinating symbioses, the advent of molecular biology, live cell imaging, and “omics” techniques have provided new and powerful tools to decipher the cellular and molecular mechanisms that rule mutualistic plant-fungus interactions. In this article we focus on the most common mycorrhizal association, arbuscular mycorrhiza (AM), which is formed by a group of soil fungi belonging to Glomeromycota. AM fungi are believed to have assisted the conquest of dry lands by early plants around 450 million years ago and are found today in most land ecosystems. AM fungi have several peculiar biological traits, including obligate biotrophy, intracellular development inside the plant tissues, coenocytic multinucleate hyphae, and spores, as well as unique genetics, such as the putative absence of a sexual cycle, and multiple ecological functions. All of these features make the study of AM fungi as intriguing as it is challenging, and their symbiotic association with most crop plants is currently raising a broad interest in agronomic contexts for the potential use of AM fungi in sustainable production under conditions of low chemical input.
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Xie X, Lin H, Peng X, Xu C, Sun Z, Jiang K, Huang A, Wu X, Tang N, Salvioli A, Bonfante P, Zhao B. Arbuscular Mycorrhizal Symbiosis Requires a Phosphate Transceptor in the Gigaspora margarita Fungal Symbiont. MOLECULAR PLANT 2016; 9:1583-1608. [PMID: 27688206 DOI: 10.1016/j.molp.2016.08.011] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Revised: 08/03/2016] [Accepted: 08/17/2016] [Indexed: 06/06/2023]
Abstract
The majority of terrestrial vascular plants are capable of forming mutualistic associations with obligate biotrophic arbuscular mycorrhizal (AM) fungi from the phylum Glomeromycota. This mutualistic symbiosis provides carbohydrates to the fungus, and reciprocally improves plant phosphate uptake. AM fungal transporters can acquire phosphate from the soil through the hyphal networks. Nevertheless, the precise functions of AM fungal phosphate transporters, and whether they act as sensors or as nutrient transporters, in fungal signal transduction remain unclear. Here, we report a high-affinity phosphate transporter GigmPT from Gigaspora margarita that is required for AM symbiosis. Host-induced gene silencing of GigmPT hampers the development of G. margarita during AM symbiosis. Most importantly, GigmPT functions as a phosphate transceptor in G. margarita regarding the activation of the phosphate signaling pathway as well as the protein kinase A signaling cascade. Using the substituted-cysteine accessibility method, we identified residues A146 (in transmembrane domain [TMD] IV) and Val357 (in TMD VIII) of GigmPT, both of which are critical for phosphate signaling and transport in yeast during growth induction. Collectively, our results provide significant insights into the molecular functions of a phosphate transceptor from the AM fungus G. margarita.
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Affiliation(s)
- Xianan Xie
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Hui Lin
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Xiaowei Peng
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Congrui Xu
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Zhongfeng Sun
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Kexin Jiang
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Antian Huang
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Xiaohui Wu
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Nianwu Tang
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China
| | - Alessandra Salvioli
- Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125 Torino, Italy
| | - Paola Bonfante
- Department of Life Sciences and Systems Biology, University of Torino, Viale Mattioli 25, 10125 Torino, Italy
| | - Bin Zhao
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, P.R.China.
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Ferrol N, Tamayo E, Vargas P. The heavy metal paradox in arbuscular mycorrhizas: from mechanisms to biotechnological applications. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:6253-6265. [PMID: 27799283 DOI: 10.1093/jxb/erw403] [Citation(s) in RCA: 127] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Arbuscular mycorrhizal symbioses that involve most plants and Glomeromycota fungi are integral and functional parts of plant roots. In these associations, the fungi not only colonize the root cortex but also maintain an extensive network of hyphae that extend out of the root into the surrounding environment. These external hyphae contribute to plant uptake of low mobility nutrients, such as P, Zn, and Cu. Besides improving plant mineral nutrition, arbuscular mycorrhizal fungi (AMF) can alleviate heavy metal (HM) toxicity to their host plants. HMs, such as Cu, Zn, Fe, and Mn, play essential roles in many biological processes but are toxic when present in excess. This makes their transport and homeostatic control of particular importance to all living organisms. AMF play an important role in modulating plant HM acquisition in a wide range of soil metal concentrations and have been considered to be a key element in the improvement of micronutrient concentrations in crops and in the phytoremediation of polluted soils. In the present review, we provide an overview of the contribution of AMF to plant HM acquisition and performance under deficient and toxic HM conditions, and summarize current knowledge of metal homeostasis mechanisms in arbuscular mycorrhizas.
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Affiliation(s)
- Nuria Ferrol
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, CSIC, C. Profesor Albareda 1, 18008, Granada, Spain
| | - Elisabeth Tamayo
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, CSIC, C. Profesor Albareda 1, 18008, Granada, Spain
| | - Paola Vargas
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, CSIC, C. Profesor Albareda 1, 18008, Granada, Spain
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Garcia K, Doidy J, Zimmermann SD, Wipf D, Courty PE. Take a Trip Through the Plant and Fungal Transportome of Mycorrhiza. TRENDS IN PLANT SCIENCE 2016; 21:937-950. [PMID: 27514454 DOI: 10.1016/j.tplants.2016.07.010] [Citation(s) in RCA: 107] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Revised: 07/18/2016] [Accepted: 07/25/2016] [Indexed: 05/21/2023]
Abstract
Soil nutrient acquisition and exchanges through symbiotic plant-fungus interactions in the rhizosphere are key features for the current agricultural and environmental challenges. Improved crop yield and plant mineral nutrition through a fungal symbiont has been widely described. In return, the host plant supplies carbon substrates to its fungal partner. We review here recent progress on molecular players of membrane transport involved in nutritional exchanges between mycorrhizal plants and fungi. We cover the transportome, from the transport proteins involved in sugar fluxes from plants towards fungi, to the uptake from the soil and exchange of nitrogen, phosphate, potassium, sulfate, and water. Together, these advances in the comprehension of the mycorrhizal transportome will help in developing the future engineering of new agro-ecological systems.
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Affiliation(s)
- Kevin Garcia
- Department of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA
| | - Joan Doidy
- Center for Genomics and Systems Biology, Department of Biology, New York University, New York, NY 10003, USA
| | - Sabine D Zimmermann
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA), Montpellier SupAgro, Université de Montpellier, 34060 Montpellier, France
| | - Daniel Wipf
- Agroécologie, AgroSup Dijon, CNRS, INRA, Université de Bourgogne Franche-Comté, 21000 Dijon, France
| | - Pierre-Emmanuel Courty
- University of Fribourg, Department of Biology, 3 rue Albert Gockel, 1700 Fribourg, Switzerland.
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Sanchez-Bel P, Troncho P, Gamir J, Pozo MJ, Camañes G, Cerezo M, Flors V. The Nitrogen Availability Interferes with Mycorrhiza-Induced Resistance against Botrytis cinerea in Tomato. Front Microbiol 2016; 7:1598. [PMID: 27790197 PMCID: PMC5064179 DOI: 10.3389/fmicb.2016.01598] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2016] [Accepted: 09/26/2016] [Indexed: 12/04/2022] Open
Abstract
Mycorrhizal plants are generally quite efficient in coping with environmental challenges. It has been shown that the symbiosis with arbuscular mycorrhizal fungi (AMF) can confer resistance against root and foliar pathogens, although the molecular mechanisms underlying such mycorrhiza-induced resistance (MIR) are poorly understood. Tomato plants colonized with the AMF Rhizophagus irregularis display enhanced resistance against the necrotrophic foliar pathogen Botrytis cinerea. Leaves from arbuscular mycorrhizal (AM) plants develop smaller necrotic lesions, mirrored also by a reduced levels of fungal biomass. A plethora of metabolic changes takes place in AMF colonized plants upon infection. Certain changes located in the oxylipin pathway indicate that several intermediaries are over-accumulated in the AM upon infection. AM plants react by accumulating higher levels of the vitamins folic acid and riboflavin, indolic derivatives and phenolic compounds such as ferulic acid and chlorogenic acid. Transcriptional analysis support the key role played by the LOX pathway in the shoots associated with MIR against B. cinerea. Interestingly, plants that have suffered a short period of nitrogen starvation appear to react by reprogramming their metabolic and genetic responses by prioritizing abiotic stress tolerance. Consequently, plants subjected to a transient nitrogen depletion become more susceptible to B. cinerea. Under these experimental conditions, MIR is severely affected although still functional. Many metabolic and transcriptional responses which are accumulated or activated by MIR such NRT2 transcript induction and OPDA and most Trp and indolic derivatives accumulation during MIR were repressed or reduced when tomato plants were depleted of N for 48 h prior infection. These results highlight the beneficial roles of AMF in crop protection by promoting induced resistance not only under optimal nutritional conditions but also buffering the susceptibility triggered by transient N depletion.
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Affiliation(s)
- Paloma Sanchez-Bel
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (Estación Experimental del Zaidín)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Castellón, Spain
| | - Pilar Troncho
- Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Castellón, Spain
| | - Jordi Gamir
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (Estación Experimental del Zaidín)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume ICastellón, Spain; Department of Biology. University of FribourgFribourg, Switzerland
| | - Maria J Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, Spain Unidad Asociada-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Granada, Spain
| | - Gemma Camañes
- Bioquímica y Biotecnología, Plant Physiology Section, Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Castellón, Spain
| | - Miguel Cerezo
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (Estación Experimental del Zaidín)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Castellón, Spain
| | - Víctor Flors
- Metabolic Integration and Cell Signaling Laboratory, Plant Physiology Section, Unidad Asociada al Consejo Superior de Investigaciones Científicas (Estación Experimental del Zaidín)-Department of Ciencias Agrarias y del Medio Natural, Universitat Jaume I Castellón, Spain
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Castro-Rodríguez V, Assaf-Casals I, Pérez-Tienda J, Fan X, Avila C, Miller A, Cánovas FM. Deciphering the molecular basis of ammonium uptake and transport in maritime pine. PLANT, CELL & ENVIRONMENT 2016; 39:1669-1682. [PMID: 26662862 DOI: 10.1111/pce.12692] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2015] [Revised: 11/06/2015] [Accepted: 11/09/2015] [Indexed: 06/05/2023]
Abstract
Ammonium is the predominant form of inorganic nitrogen in the soil of coniferous forests. Despite the ecological and economic importance of conifers, the molecular basis of ammonium uptake and transport in this group of gymnosperms is largely unknown. In this study, we describe the functional characterization of members of the AMT gene family in Pinus pinaster: PpAMT1.1, PpAMT1.2 and PpAMT1.3 (subfamily 1) and PpAMT2.1 and PpAMT2.3 (subfamily 2). Our phylogenetic analysis indicates that in conifers, all members of the AMT1 subfamily evolved from a common ancestor that is evolutionarily related to the ancient PpAMT1.2 gene. Individual AMT genes are developmentally and nutritionally regulated, and their transcripts are specifically distributed in different organs. PpAMT1.3 was predominantly expressed in the roots, particularly during N starvation and mycorrhizal interaction, whereas PpAMT2.3 was preferentially expressed in lateral roots. Immunolocalization studies of roots with varied nitrogen availability revealed that PpAMT1 and PpAMT2 proteins play complementary roles in the uptake of external ammonium. Heterologous expression in yeast and Xenopus oocytes revealed that the AMT genes encode functional transporters with different kinetics and with different capacities for ammonium transport. Our results provide new insights on how nitrogen is acquired and transported in conifers.
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Affiliation(s)
- Vanessa Castro-Rodríguez
- Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071, Málaga, Spain
| | - Iman Assaf-Casals
- Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071, Málaga, Spain
| | - Jacob Pérez-Tienda
- Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071, Málaga, Spain
| | - Xiaorong Fan
- Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich, Norfolk, NR4 7UH, UK
| | - Concepción Avila
- Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071, Málaga, Spain
| | - Anthony Miller
- Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich, Norfolk, NR4 7UH, UK
| | - Francisco M Cánovas
- Departamento de Biología Molecular y Bioquímica, Instituto Andaluz de Biotecnología, Universidad de Málaga, 29071, Málaga, Spain
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50
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Fiorilli V, Belmondo S, Khouja HR, Abbà S, Faccio A, Daghino S, Lanfranco L. RiPEIP1, a gene from the arbuscular mycorrhizal fungus Rhizophagus irregularis, is preferentially expressed in planta and may be involved in root colonization. MYCORRHIZA 2016; 26:609-621. [PMID: 27075897 DOI: 10.1007/s00572-016-0697-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2016] [Accepted: 04/05/2016] [Indexed: 06/05/2023]
Abstract
Transcriptomics and genomics data recently obtained from the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis have offered new opportunities to decipher the contribution of the fungal partner to the establishment of the symbiotic association. The large number of genes which do not show similarity to known proteins witnesses the uniqueness of this group of plant-associated fungi. In this work, we characterize a gene that was called RiPEIP1 (Preferentially Expressed In Planta). Its expression is strongly induced in the intraradical phase, including arbuscules, and follows the expression profile of the Medicago truncatula phosphate transporter MtPT4, a molecular marker of a functional symbiosis. Indeed, mtpt4 mutant plants, which exhibit low mycorrhizal colonization and an accelerated arbuscule turnover, also show a reduced RiPEIP1 mRNA abundance. To further characterize RiPEIP1, in the absence of genetic transformation protocols for AM fungi, we took advantage of two different fungal heterologous systems. When expressed as a GFP fusion in yeast cells, RiPEIP1 localizes in the endomembrane system, in particular to the endoplasmic reticulum, which is consistent with the in silico prediction of four transmembrane domains. We then generated RiPEIP1-expressing strains of the fungus Oidiodendron maius, ericoid endomycorrhizal fungus for which transformation protocols are available. Roots of Vaccinium myrtillus colonized by RiPEIP1-expressing transgenic strains showed a higher mycorrhization level compared to roots colonized by the O. maius wild-type strain, suggesting that RiPEIP1 may regulate the root colonization process.
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Affiliation(s)
- Valentina Fiorilli
- Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.
| | - Simone Belmondo
- Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy
| | - Hassine Radhouane Khouja
- Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy
| | - Simona Abbà
- Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy
| | - Antonella Faccio
- Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy
| | - Stefania Daghino
- Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy
| | - Luisa Lanfranco
- Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy
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