Limitations of experiments performed in artificially made OECD standard soils for predicting cadmium, lead and zinc toxicity towards organisms living in natural soils

Genetic evidence behind the Cd resistance of wild Metaphire californica: The global RNA regulation rather than specific mutation of well-known gene

Heavy metal contamination presents a profound threat to terrestrial biodiversity, yet the genetic adaptation and evolution of field organisms under persistent stress are poorly understood. In this study, the Cd-resistant earthworms Metaphire californica collected from the control (Meihua, MHC) and elevated-pollution (Lupu, LPC) pairwise sites were used to elucidate the underlying genetic mechanism. A 48-h acute test showed that LPC worms exhibited 2.34 times higher LC50 (50% lethal concentration values) compared to MHC ones. The Cd bioaccumulation, metallothionein (MT) protein contents, and MT gene expression of LPC M.californica were all significantly higher than those of MHC worms. The well-known MT gene of M.californica was successfully cloned and identified, however, the encoding nucleotide and amino acids displayed non-observable mutations and the phylogenetic tree also revealed that different populations clustered together. Additionally, the results of transcriptomics sequencing demonstrated 173 differentially expressed genes between LPC and MHC worms, primarily involved in stress-response and detoxification pathways, including signal transduction, material metabolism, and protein exports. The above results confirmed that the crucial MT gene did not undergo genetic mutations but rather exhibited global mRNA regulation responsible for the Cd resistance of M.californica. The current study partially disclosed the stress adaptation and evolution of organisms under long-term in situ contamination, which provides insights into maintaining biodiversity under adverse environment.

Impact of progressively cumulative exposure of AgNPs on earthworms (Eisenia fetida) and implication for eco-toxicological risk assessment

Hazardous pollutants released into the real environment mostly own long-lasting cumulative characteristics and have progressively negative impacts on organisms, which are always neglected in laboratory toxicological tests. Here in this study, the different ecotoxicity of Ag nanoparticles (AgNPs) on earthworm Eisenia fetida was compared via various endpoints and transcriptional sequencing between the 28-day progressively repeated (from 60 to 80, final 100 mg/kg) and one-step (directly to 100 mg/kg) exposure. The results showed that earthworms under progressively repeated exposure showed significantly less biomass loss and reproductive inhibition, as well as lower Ag bioaccumulation (15.6 mg/kg) compared with one-step exposure (17.9 mg/kg). The increases in enzyme activities (superoxide enzyme and catalase) and gene expression (metallothionein) also implied higher antioxidant and genetic toxicity in one-step exposed earthworms compared with those from progressively repeated exposure. Furthermore, the transcriptomic analysis identified 582 and 854 differentially expressed genes in the treatments of one-step and repeated exposure respectively compared with the control group. The results of pathway annotation and classification suggested similar enrichments of damage induction but different in toxic stress responses, whereas earthworms from repeated exposure possessed more detoxification-related pathways like translation and multicellular organismal processes. This study innovatively took into account the impacts of processive exposure occurring in the real environment and elucidated distinctions of toxicity and adaptation caused by different exposure patterns, which provided the theoretical basis for real risk identification under the framework and guidance of traditional toxicology, also the implication for the improvement of eco-toxicological risk assessment.

Are the Brazilian prevention values for copper and zinc in soils suitable for protecting earthworms against metal toxicity?

The current Brazilian copper (Cu) and zinc (Zn) prevention values (PV) for soil quality do not take into account the ecotoxicological impacts on soil organisms, which suggests these guiding values may not be protective of soil ecological trophic levels. This study assessed the acute (mortality) and chronic toxicity (reproduction), as well as the cumulative (bioaccumulation) potential of Cu and Zn (pseudo-total and available fractions) for earthworms Eisenia andrei in a Tropical Artificial Soil (TAS) and two tropical field soils (Oxisol and Alfisol). Toxicity data based on pseudo-total fractions were compared to PV. The Lowest Observed Effect Concentrations (LOEC) for the mortality endpoint were found at Cu and Zn concentrations higher than their PV (60 and 300 mg kg^-1, respectively), regardless of the soil type. However, concentrations lower than PV reduced the reproduction of E. andrei by 20% (compared to the controls) for Cu in all tested soils (EC₂₀s from 31.7 to 51.2 mg kg^-1) and by 50% for Zn in Oxisol and Alfisol (EC₅₀s = 225 and 283 mg kg^-1, respectively). In TAS, only the EC₂₀ (273 mg kg^-1) for Zn was lower than PV. Increases of Cu in earthworm tissues occurred at concentrations higher than PV in all tested soils (LOEC values from 70 to 107 mg kg^-1). The same was observed for Zn in TAS (LOEC = 497 mg kg^-1), while in the field soils, the increases of Zn in earthworm tissues were lower than PV (LOEC = 131 and 259 mg kg^-1 in Alfisol and Oxisol, respectively). We suggest the following: (1) The current Brazilian PV for Cu and Zn are not protective for earthworms (E. andrei) in the field soils tested; (2) PV derived from ecotoxicological assays in artificial soil cannot be representative for Brazilian field soils; (3) Using PV based on the pseudo-total fraction, without a soil-type normalizing factor, may limit the representativeness of this threshold for different soil types.

The effect of polystyrene microplastic and biosolid application on the toxicity and bioaccumulation of cadmium for Enchytraeus crypticus

Plastics smaller than 5 mm that end up in a soil environment are known as microplastics (MPs). Microplastics have become a common contaminant in agricultural areas in addition to metals. However, the effect of cadmium (Cd) on soil organisms has not been clearly defined in the presence of MPs. In addition to MPs, biosolid application as a soil amendment in agricultural lands is also leading to shifts in soil conditions, such as the concentrations of nutrients and organic matter. Therefore, the aim of this study is to investigate the toxicity and bioaccumulation of Cd for Enchytraeus crypticus in the presence of polystyrene (PS)-MPs and biosolids to provide insight into their possible interactions. The lethal toxic concentration (LC50) for Cd was higher than 650 mg Cd/kg dry soil for all conditions. The presence of PS-MPs increased the toxicity of Cd for which EC50 was 102 and 38 mg Cd/kg dry soil without and with Cd, respectively, which may be the result of an increased exposure rate through adsorption of Cd on PS-MPs. On the contrary, the presence of biosolids decreased the toxicity of Cd where EC50 was 193 and 473 mg Cd/kg dry soil for the sets applied with 0.6 and 0.9 g biosolids, respectively. Coexistence of biosolids and PS-MPs decreased the reproduction toxicity of Cd, which is similar to the biosolid effect (EC50 is 305 mg Cd/kg dry soil). Bioaccumulation of Cd only positively correlated with its initial concentration in soil and was not affected by the presence of PS-MPs or biosolids. Integr Environ Assess Manag 2023;19:489-500. © 2022 SETAC.

Effects of Trophic Level and Land Use on the Variation of Animal Antibiotic Resistome in the Soil Food Web

In recent years, it has been increasingly recognized that soil animals are hidden reservoirs of antibiotic resistance genes (ARGs) and play a vital role in spreading ARGs in soil ecosystems. However, little is known about the variation of ARGs among different animals in the soil food web and effects of trophic levels and land uses on them. We characterized the antibiotic resistomes of 495 soil animal samples collected from six regions across China, including two different land uses. A total of 265 ARGs were detected in all animal samples, and relative abundances of ARGs in animals were significantly higher than in soils. In addition, significant differences in ARGs were observed among different animal groups. Twelve common ARGs were identified among all animal groups, accounting for 17.4% of total ARGs abundance. A positive and significant correlation was found between δ¹⁵N values (trophic level) and total ARGs abundance in animals. The relative abundance of ARGs in the soil food web from arable land was higher than forest land. Changes in soil antibiotics may indirectly affect animal resistome by altering soil ARGs. This study suggests that the risk of ARGs spreading through the food web is greater in arable than in forest ecosystems.

Physiochemical responses of earthworms (Eisenia fetida) under exposure to lanthanum and cerium alone or in combination in artificial and contaminated soils

Rare earth elements inevitably release into the soil due to their widespread application. However, it is unclear how they affect the soil animals. The study surveyed the growth and physiological responses of earthworm (Eisenia fetida) exposed into artificial soils spiked with La, Ce, and their mixture, and actual mine soil collected from an abandoned La-Ce mining area (Mianning, Sichuan). The results showed that the 1000-1200 mg/kg combined exposure in two soils induced significant histopathological and phenotypic changes of earthworms. Concentration significantly affected the superoxide dismutase (SOD), peroxidase (POD), malondialdehyde (MDA), and protein of E. fetida and the effects differentiated with the prolonging duration. These indicators were negatively affected under the La stress ≥800 mg/kg (SOD, POD, and protein), the 1200 mg/kg (SOD), Ce stress ≥1000 mg/kg (protein), and the combination ≥800 mg/kg (SOD, POD) and ≥1000 mg/kg (protein). Artificial combination had -15.04% (SOD), 8.87% (POD), 5.64% (MDA), and -8.34% (protein) difference compared with the contamination soil, respectively. Overall, E. fetida respond sensitively under the La and Ce stress, the antioxidant defense system and the lipid peroxidation were stimulated, and the artificial soil might overestimate eco-toxicological effect.

Foliar application of 3-hydroxy-4-pyridinone Fe-chelate [Fe(mpp)3 ] induces responses at the root level amending iron deficiency chlorosis in soybean

Iron (Fe) deficiency chlorosis (IDC) affects the growth of several crops, especially when growing in alkaline soils. The application of synthetic Fe-chelates is one of the most commonly used strategies in IDC amendment, despite their associated negative environmental impacts. In a previous work, the Fe-chelate tris(3-hydroxy-1-(H)-2-methyl-4-pyridinonate) iron(III) [Fe(mpp)3 ] has shown great potential for alleviating IDC in soybean (Glycine max) in the early stages of plant development under hydroponic conditions. Herein, its efficacy was verified under soil conditions in soybean grown from seed to full maturity. Chlorophyll levels, plant growth, root and shoot mineral accumulation (K, Mg, Ca, Na, P, Mn, Zn, Ni, and Co) and FERRITIN expression were accessed at V5 phenological stage. Compared to a commonly used Fe chelate, FeEDDHA, supplementation with [Fe(mpp)3 ] led to a 29% higher relative chlorophyll content, 32% higher root biomass, 36% higher trifoliate Fe concentration, and a twofold increase in leaf FERRITIN gene expression. [Fe(mpp)3 ] supplementation also resulted in increased accumulation of P, K, Zn, and Co. At full maturity, the remaining plants were harvested and [Fe(mpp)3 ] application led to a 32% seed yield increase when compared to FeEDDHA. This is the first report on the use of [Fe(mpp)3 ] under alkaline soil conditions for IDC correction, and we show that its foliar application has a longer-lasting effect than FeEDDHA, induces efficient root responses, and promotes the uptake of other nutrients.

Characteristics of Cadmium and Lead Accumulation and Transfer by Chenopodium Quinoa Will

Potentially toxic elements are persistent in the environment and plants have the ability to absorb and transfer them from soil in edible parts. The objectives of this study were to characterize the distribution of Cd and Pb in quinoa tissues and to investigate their accumulation and transfer from irrigated water in edible parts of quinoa. For the purpose of this study experiment and simulated pollution in the form of different metal concentration in water that was used for irrigation was designed. Distribution of metals in quinoa were determined and analyzed in seed formation and maturation stage. Bioaccumulation and translocation factors were calculated to characterize the efficiency of quinoa to absorb metals. The results of our study indicated that quinoa adopts potentially toxic metals from substrate but does not accumulate them. The potential of such a conclusion is useful for exploring the use of quinoa as lead and cadmium excluders.

Transcriptome analysis reveals comprehensive responses to cadmium stress in maize inoculated with arbuscular mycorrhizal fungi

Biological strategy of utilization of plants-microbe's interactions to remediate cadmium (Cd) contaminated soils is effective and practical. However, limited evidence at transcriptome level is available about how microbes work with host plants to alleviate Cd stress. In the present study, comparative transcriptomic analysis was performed between maize seedlings inoculated with arbuscular mycorrhizal (AM) fungi and non-AM fungi inoculation under distinct concentrations of CdCl₂ (0, 25, and 50 mg per kg soil). Significantly higher levels of Cd were found in root tissues of maize colonized by AM fungi, whereas, Cd content was reduced as much as 50% in leaf tissues when compared to non-AM seedlings, indicating that symbiosis between AM fungi and maize seedlings can significantly block translocation of Cd from roots to leaf tissues. Moreover, a total of 5827 differentially expressed genes (DEG) were determined and approximately 68.54% DEGs were downregulated when roots were exposed to high Cd stress. In contrast, 67.16% (595) DEGs were significantly up-regulated when seedlings were colonized by AM fungi under 0 mg CdCl₂. Based on hierarchical clustering analysis, global expression profiles were split into eight distinct clusters. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that hundreds of genes functioning in plant hormone signal transduction, mitogen-activated protein kinase (MAPK) signaling pathway and glutathione metabolism were enriched. Furthermore, MapMan pathway analysis indicated a more comprehensive overview response, including hormone metabolism, especially in JA, glutathione metabolism, transcription factors and secondary metabolites, to Cd stress in mycorrhizal maize seedlings. These results provide an overview, at the transcriptome level, of how inoculation of maize seedlings by AM fungi could facilitate the relief of Cd stress.

Degradation of tricyclic polyaromatic hydrocarbons in water, soil and river sediment with a novel TiO2 based heterogeneous nanocomposite

Polycyclic aromatic hydrocarbons (PAHs), pervasive and precedence pollutants have potential to decimate the bionetwork and human health. Therefore, photocatalytic degradation of toxic three membered PAHs, namely acenaphthene (ACN), phenanthrene (PHN) and fluorene (FLU) was explored in water and soil. Titanium dioxide based zinc hexacyanoferrate framework (TiO₂@ZnHCF) nanocomposite was synthesized via a two step A. indica mediated co-precipitation method. Under sunlight, fall in concentration of PAHs (Water- 93%-96%, soil- 82%-86% and river sediment- 81.63%-85.43%) with time revealed superior activity of nanocomposite (TiO₂@ZnHCF) as compared to the bared one. Slower degradation in soil and sediment could be attributed to the reduced diffusion caused by the interaction between the organic content of soil/sediment with PAHs. Doping caused an increase in surface area (118.15 m²g^-1) with decrease in band gap energy (1.65 eV) and photoluminescence intensity. PAHs removal (X_m = 9.48 mg g^-1 of ACN, 9.35 mg g^-1 of PHN and 8.96 mg g^-1 of FLU) involved role of "cation- π" interaction with nanocomposite. Besides, it reduced t_1/2 values of ACN (1.88 h), PHN (2.09 h) and FLU (2.86 h) and resulted into smaller by-products. Smaller by-products like (Z)-prop-1-ene-1,2,3-triol (m/z = 91) and (E)-3-hydroxyacrylaldehyde (m/z = 71) identified in GC-MS, evidently braced e^- excitement from encapsulated nanocatalyst followed by OH (active species) based oxidation of PAHs. Lower photoluminescence intensity indicates the least charge carrier recombination with highest photocatalytic activity of nanocomposites. Inclusive of the present study provides promising photocatalyst with greater surface activity, low quantum yield with charge separation, reusable up to ten cycles deprived of substantial loss of its action and suppressing the cost of process.

The Heavy-Metal Resistance Determinant of Newly Isolated Bacterium from a Nickel-Contaminated Soil in Southwest Slovakia

A bacterial isolate MR-CH-I2 [KC809939] isolated from soil contaminated mainly by high nickel concentrations in southwest Slovakia was previously found carrying nccA-like heavy-metal resistance determinant, marked as MR-CH-I2-HMR [KF218096]. According to phylogenetic analysis of short (696 bp) 16S rDNA (16S rRNA) sequences this bacterium was tentatively assigned to Uncultured beta proteobacterium clone GC0AA7ZA05PP1 [JQ913301]. nccA-like gene product was on the same base of its partial (581 bp) sequences tentatively assigned to CzcA family heavy metal efflux pump [YP_001899332] from Ralstonia picketii 12J with 99% similarity. In this study the bacterium MR-CH-I2 and its heavy-metal resistance determinant were more precisely identified. This bacterial isolate was on the base of phylogenetic analysis of almost the whole (1,500 bp) 16S rDNA (16S rRNA) sequence, MR-CH-I2 [MF102046], and sequence for gyrB gene and its product respectively, MR-CH-I2-gyrB [MF134666], assigned to R. picketii 12J [CP001068] with 99 and 100% similarities, respectively. In addition, the whole nccA-like heavy-metal resistance gene sequence (3,192 bp), marked as MR-CH-I2-nccA [KR476581], was obtained and on the base of phylogenetic analysis its assignment was confirmed to MULTISPECIES: cation efflux system protein CzcA [WP_004635342] from Burkholderiaceae with 98% similarity. Furthermore, although the bacterium carried one high molecular plasmid of about 50 kb in size, nccA-like gene was not located on this plasmid. Finally, the results from RT-PCR analysis showed that MR-CH-I2-nccA gene was significantly induced only by the addition of nickel.

Immobilization of cadmium and improvement of bacterial community in contaminated soil following a continuous amendment with lime mixed with fertilizers: A four-season field experiment

The effects of the continuous amendments with lime (L), lime mixed with organic manure (LO), or phosphate fertilizer (LP) on the soil bacterial community, soil available cadmium (Cd) content, and Cd accumulation in rice planted in a Cd contaminated paddy soil were determined through a four-season field experiment. The results showed that with continuous application of amendments during the four seasons, the soil pH increased significantly compared with the control, while the soil available Cd content significantly decreased by 12.9-18.2%, 13.1-17.3% and 0.09-23.2% under the L, LO, or LP treatments, and the Cd content of rice was significantly reduced by 28.5-56.2%, 37.6-53.4%, and 31.2-44.6%, respectively. The rice Cd content in each season at amendment treatments was lower than the National Food Safety Standard of China (maximum level of Cd in grains is 0.2 mg/kg). The diversity and richness of soil bacteria significantly increased after the continuous amendments in soil for four-season cropping. Soil pH and available Cd content were important factors for soil bacterial community. Lime mixed with phosphate fertilizer or organic manure had been characterized by a significant increase of Proteobacteria, Nitrospirae, and Chloroflexi and a decrease of Acidobacteria based on an Illumina Miseq sequencing analysis. The results indicate that the continuous application of lime mixed with organic manure or phosphate fertilizer is a very important measure to ensure the quality safety of rice and improve soil quality in a Cd-contaminated paddy.

Terrestrial Ecotoxic Impacts Stemming from Emissions of Cd, Cu, Ni, Pb and Zn from Manure: A Spatially Differentiated Assessment in Europe

Metallic elements present in livestock manure as co-contaminants have the potential to cause terrestrial ecotoxic impacts when the manure is used as fertilizer on agricultural soils. The magnitude of this impact at country scale in Europe has, to date, not been quantified. Here, we address this knowledge gap by combining recently developed national emission inventories of Cd, Cu, Ni, Pb and Zn releases from manure with metal- and soil-specific comparative toxicity potentials (CTP) calculated for cropland grid cells at 1 × 1 km resolution for 33 European countries. The CTPs account for speciation in environmental fate, exposure and effects, including reduction in the solid-phase reactivity of a metal when it is associated with organic carbon present in the manure. Given the scarcity of inventory data at sub-national level, it was assumed that each unit area of cropland within a given country has the same probability to receive manure. The resulting CTPs span a range of several orders of magnitude reflecting the influence of soil type and properties on the speciation patterns and resulting CTP values. However, when combined with the use of manure in each European country, the resulting national impact scores were mainly explained by the total mass input of metal released to soil rather than by geographic variability in the CTP values. Simple linear regression is then sufficient to predict terrestrial ecotoxic impacts from input mass. Although some changes in ranking of metals and countries were observed, both mass- and impact-based comparisons between metals agreed that Zn and Cu are dominant contributors to total impacts, and that top contributing countries were those emitting the largest amounts of metals. Our findings show that spatially differentiated impact assessment is important for ranking of countries when differences in national emission inventories between countries are smaller than a factor of two (Ni), a factor of three (Cd, Cu, Zn) or a factor of four (Pb). In other cases, ranking of countries can be based on national emission inventories.