1
|
Hosseini F, Lashani E, Moghimi H. Simultaneous bioremediation of phenol and tellurite by Lysinibacillus sp. EBL303 and characterization of biosynthesized Te nanoparticles. Sci Rep 2023; 13:1243. [PMID: 36690691 PMCID: PMC9870877 DOI: 10.1038/s41598-023-28468-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Accepted: 01/18/2023] [Indexed: 01/24/2023] Open
Abstract
Aromatic compounds and metalloid oxyanions are abundant in the environment due to natural resources and industrial wastes. The high toxicity of phenol and tellurite poses a significant threat to all forms of life. A halotolerant bacterium was isolated and identified as Lysinibacillus sp. EBL303. The remediation analysis shows that 500 mg/L phenol and 0.5 mM tellurite can be remediated entirely in separate cultures within 74 and 56 h, respectively. In addition, co-remediation of pollutants resulted in the same phenol degradation and 27% less tellurite reduction within 98 h. Since phenol and tellurite exhibited inhibitory behavior, their removal kinetics fitted well with the first-order model. In the characterization of biosynthesized tellurium nanoparticles (TeNPs), transmission electron microscopy, dynamic light scattering, FE-SEM, and dispersive X-ray (EDX) showed that the separated intracellular TeNPs were spherical and consisted of only tellurium with 22-148 nm in size. Additionally, investigations using X-ray diffraction and Fourier-transform infrared spectroscopy revealed proteins and lipids covering the surface of these amorphous TeNPs. Remarkably, this study is the first report to demonstrate the simultaneous bioremediation of phenol and tellurite and the biosynthesis of TeNPs, indicating the potential of Lysinibacillus sp. EBL303 in this matter, which can be applied to environmental remediation and the nanotechnology industry.
Collapse
Affiliation(s)
- Firooz Hosseini
- Department of Microbial Biotechnology, School of Biology, College of Science, University of Tehran, Tehran, 1417864411, Iran
| | - Elham Lashani
- Department of Microbial Biotechnology, School of Biology, College of Science, University of Tehran, Tehran, 1417864411, Iran
| | - Hamid Moghimi
- Department of Microbial Biotechnology, School of Biology, College of Science, University of Tehran, Tehran, 1417864411, Iran.
| |
Collapse
|
2
|
He Y, Wang Z, Li T, Peng X, Tang Y, Jia X. Biodegradation of phenol by Candida tropicalis sp.: Kinetics, identification of putative genes and reconstruction of catabolic pathways by genomic and transcriptomic characteristics. CHEMOSPHERE 2022; 308:136443. [PMID: 36116634 DOI: 10.1016/j.chemosphere.2022.136443] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 08/24/2022] [Accepted: 09/10/2022] [Indexed: 06/15/2023]
Abstract
Candida tropicalis sp. was isolated with predominant biodegradation capability to phenol compounds, even with high concentration or in acid environment. The biodegradation of phenol was evaluated at the following concentrations 10-1750 mg L-1, the strain exhibited well biodegradation efficiency. The maximum specific growth rate was 0.660 h-1 and the specific biodegradation rates was 0.47 mg (phenol) [(mg (VSS) h]-1. Differentially expressed genes were screened out, and results revealed a complete process of energy and carbon metabolism. The genes' arrangements and phylogenetic information showed the unique genetic characteristics of the strain. Catabolic pathways were reconstructed and some key phenol-degrading genes were obviously upregulated, including pheA, catA, OXCT and fadA. A notable detail that CMBL encoding carboxymethylenebutenolidase was speculated to be involved in a shortened pathway of phenol biodegradation, thereby contributing to the reconstruction of the novel phenol catabolic pathway through the hydrolases of dienelactone. Finally, key enzymes were verified by the analysis of specific activity.
Collapse
Affiliation(s)
- Yuzhe He
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China
| | - Zhangna Wang
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China
| | - Tianyu Li
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China
| | - Xingxing Peng
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China; Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou, 510275, China.
| | - Yetao Tang
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China; Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou, 510275, China
| | - Xiaoshan Jia
- School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, 510006, China; Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou, 510275, China.
| |
Collapse
|
3
|
Zhang X, Linghu S, Chen Z, Gu H, Chen X, Wei X, Hu X, Yang Y, Gao Y. Bacterial diversity evolution process based on physicochemical characteristics of sludge treating hydroquinone during acclimation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:31686-31699. [PMID: 35001263 DOI: 10.1007/s11356-021-17325-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Accepted: 10/29/2021] [Indexed: 06/14/2023]
Abstract
Hydroquinone is one of the main pollutants in coal-gasification wastewater, which is biologically toxic and difficult to remove. The aerobic biodegradation rate, organic toxicity, and microbial community structure at different acclimation stages of degradation of hydroquinone by activated sludge were investigated. In each acclimation cycle, the removal of hydroquinone reached 100% after 5 days, indicating that high-concentration hydroquinone in the activated sludge could be completely biodegraded. When the microbial flora was inhibited by the influent hydroquinone, the enzyme system experienced stress conditions and led to the secretion of secondary metabolites, extracellular protein of 5-10 kDa mainly contributing to the sludge organic toxicity. Microbial diversity analysis showed that with the increase of the concentration of hydroquinone, β-Proteus bacteria such as Azoarcus and Dechloromonas gradually accumulated, which improved the removal of hydroquinone with aerobic activated sludge in the sequencing batch reactor (SBR) system. As the inhibition degree exceeded the appropriate tolerance range of microorganisms, bacteria would secrete much more secondary metabolites, and the organic toxicity of sludge would reach a relatively high level.
Collapse
Affiliation(s)
- Xinyu Zhang
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Shanshan Linghu
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Zhichong Chen
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Hao Gu
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Xiurong Chen
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China.
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China.
| | - Xiao Wei
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Xueyang Hu
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Yingying Yang
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| | - Yuqing Gao
- National Engineering Laboratory for High-Concentration Refractory Organic Wastewater Treatment Technologies (NELHROWTT), East China University of Science and Technology, Shanghai, 200237, China
- Protection Key Laboratory of Environmental Risk Assessment and Control on Chemical Process, East China University of Science and Technology, Shanghai, 200237, China
| |
Collapse
|
4
|
Fang Y, Hu J, Wang H, Chen D, Zhang A, Wang X, Ni Y. Development of stable agar/carrageenan-Fe 3O 4-Klebsiella pneumoniae composite beads for efficient phenol degradation. ENVIRONMENTAL RESEARCH 2022; 205:112454. [PMID: 34856163 DOI: 10.1016/j.envres.2021.112454] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Revised: 11/21/2021] [Accepted: 11/24/2021] [Indexed: 06/13/2023]
Abstract
It's of practical importance but highly challenging for cell immobilization supports to maintain mechanical strength and reduce microbial leakage in environmental and industrial applications. Herein, we developed an agar/κ-carrageenan composite hydrogel to entrap Klebsiella pneumoniae with the combination of nano-Fe3O4 for processing phenol wastes. The agar/carrageenan-K. pneumoniae composite bead showed good pelletizing properties, superior material strength and high cell loading. Introduction of nano-Fe3O4 to the composite gel further enhanced phenol degradation rate by >10% owing to strengthened phenol oxidation by Fe3O4-induced hydroxyl radicals (·OH) and improved mass and electron transfers. 50 successive cycles of degradation and recycling using the agar/carrageenan-K. pneumoniae composite bead showed that 1500 mg/L phenol was fully degraded for all cycles with the highest rate of 55.12 mg L-1·h-1 obtained at the 15th cycles. The improved stability and recyclability render the as-prepared immobilized phenol-degrading bacteria with great potential for industrial applications.
Collapse
Affiliation(s)
- Yuting Fang
- College of Bioresources Chemical & Materials Engineering, College of Environmental Science & Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, Shaanxi, China
| | - Jun Hu
- State Key Laboratory of Multiphase Flow in Power Engineering, Xi'an Jiaotong University, Xi'an, 710049, Shaanxi, China
| | - Haonan Wang
- College of Bioresources Chemical & Materials Engineering, College of Environmental Science & Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, Shaanxi, China
| | - Duo Chen
- College of Bioresources Chemical & Materials Engineering, College of Environmental Science & Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, Shaanxi, China
| | - Anlong Zhang
- College of Bioresources Chemical & Materials Engineering, College of Environmental Science & Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, Shaanxi, China
| | - Xueqing Wang
- College of Bioresources Chemical & Materials Engineering, College of Environmental Science & Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, Shaanxi, China; Department of Chemical Engineering, University of New Brunswick, Fredericton, New Brunswick, E3B 5A3, Canada.
| | - Yonghao Ni
- Department of Chemical Engineering, University of New Brunswick, Fredericton, New Brunswick, E3B 5A3, Canada
| |
Collapse
|
5
|
Maity D, Kundu P, Adhikari S. Isolation and characterization of 4-chlorophenol degrading bacterial strain from pharmaceutical xenobiotic compounds contaminated soil using enrichment technique. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2021.100336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
6
|
Chen X, Feng L, Zheng W, Chen S, Yang Y, Xie S. Shifts in structure and function of bacterial community in river and fish pond sediments after a phenol spill. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:14987-14998. [PMID: 34622407 DOI: 10.1007/s11356-021-16514-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 09/09/2021] [Indexed: 06/13/2023]
Abstract
Phenol is widely used in industrial processes and has microbial toxicity. However, the effects of a phenol spill on the microbial community are not clear. The present study explored the changes of bacterial communities in river and fish pond sediments after a phenol spill. The bacterial richness and diversity in river sediments were lower on day 30 (36 days after the spill) than on day 0, while they increased in fish pond sediments. The structures and functions of bacterial communities in both river and fish pond sediments were changed, and a more dramatical variation was detected in fish pond sediments. In river sediments, Proteobacteria, Chloroflexi, Acidobacteria, Bacteroidetes, and Nitrospirae were the major bacterial phyla, and Chloroflexi was enriched. In fish pond sediments, genera Brevibacillus dominated bacterial communities initially, and bacterial composition showed a dramatic change on day 30. Most predicted metabolism functions, as well as genetic information processing functions of translation, replication, and repair, were enhanced in both river and fish pond sediments, while they showed an opposite change trend for xenobiotic degradation function. This work could strengthen our understanding of the effects of phenol spills on sediment bacterial communities in both lotic and lentic ecosystems.
Collapse
Affiliation(s)
- Xiuli Chen
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Engineering, Peking University, Beijing, 100871, China
| | - Lishi Feng
- South China Institute of Environmental Sciences (SCIES), Ministry of Ecology and Environment (MEE), Guangzhou, 510655, China
| | - Wenli Zheng
- South China Institute of Environmental Sciences (SCIES), Ministry of Ecology and Environment (MEE), Guangzhou, 510655, China
| | - Sili Chen
- South China Institute of Environmental Sciences (SCIES), Ministry of Ecology and Environment (MEE), Guangzhou, 510655, China.
| | - Yuyin Yang
- South China Institute of Environmental Sciences (SCIES), Ministry of Ecology and Environment (MEE), Guangzhou, 510655, China
| | - Shuguang Xie
- State Key Joint Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Engineering, Peking University, Beijing, 100871, China.
| |
Collapse
|
7
|
|
8
|
Biological treatment of coke plant effluents: from a microbiological perspective. Biol Futur 2021; 71:359-370. [PMID: 34554459 DOI: 10.1007/s42977-020-00028-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 07/01/2020] [Indexed: 10/23/2022]
Abstract
During coke production, large volume of effluent is generated, which has a very complex chemical composition and contains several toxic and carcinogenic substances, mainly aromatic compounds, cyanide, thiocyanate and ammonium. The composition of these high-strength effluents is very diverse and depends on the quality of coals used and the operating and technological parameters of coke ovens. In general, after initial physicochemical treatment, biological purification steps are applied in activated sludge bioreactors. This review summarizes the current knowledge on the anaerobic and aerobic transformation processes and describes key microorganisms, such as phenol- and thiocyanate-degrading, floc-forming, nitrifying and denitrifying bacteria, which contribute to the removal of pollutants from coke plant effluents. Providing the theoretical basis for technical issues (in this case the microbiology of coke plant effluent treatment) aids the optimization of existing technologies and the design of new management techniques.
Collapse
|
9
|
Gamal AA, Abbas HY, Abdelwahed NAM, Kashef MT, Mahmoud K, Esawy MA, Ramadan MA. Optimization strategy of Bacillus subtilis MT453867 levansucrase and evaluation of levan role in pancreatic cancer treatment. Int J Biol Macromol 2021; 182:1590-1601. [PMID: 34015407 DOI: 10.1016/j.ijbiomac.2021.05.056] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Revised: 04/30/2021] [Accepted: 05/07/2021] [Indexed: 10/21/2022]
Abstract
Pancreatic cancer is the fourth most lethal cancer type worldwide. Due to multiple levan applications including anticancer activities, studies related to levansucrase production are of interest. To our knowledge, levan effect on pancreatic cancer cells has not been tested previously. In this work, among eighteen bacterial honey isolates, Bacillus subtilis MT453867 showed the highest levan yield (33 g/L) and levansucrase production (8.31 U/mL). One-factor-at-a-time technique increased levansucrase activity by 60% when MgSO4 was eliminated. The addition of 60 g/L banana peels enhanced the enzyme activity (192 U/mL). Placket Burman design determined the media composition for maximum levan yield (54.8 g/L) and levansucrase production (505 U/mL). The identification of levan was confirmed by thin-layer chromatography, Fourier-Transform Infrared spectrometric analysis, 13C-nuclear-magnetic resonance, and 1H-nuclear-magnetic resonance. Both crude and dialyzed levan completely inhibited the pancreatic cancer cell line at 100 ppm with no cytotoxicity on the normal retinal cell line. The LD50 of crude levan was 4833 mg/kg body weight. Levan had strong antioxidant activity and significantly reduced the expression of CXCR4 and MCM7 genes in pancreatic cancer cells with significant DNA fragmentation. In conclusion, Bacillus subtilis MT453867 levan is a promising adjunct to pancreatic-anticancer agents with both anti-cancer and chemoprotective effects.
Collapse
Affiliation(s)
- Amira A Gamal
- Chemistry of Natural and Microbial Products Department, Pharmaceutical Industries Research Division, National Research Centre, 33 El Bohouth st.(former El Tahrir st.), P.O 12622, Dokki, Cairo, Egypt
| | - Heba Y Abbas
- Department of Microbiology and Immunology, Faculty of Pharmacy, University of Sadat City
| | - Nayera A M Abdelwahed
- Chemistry of Natural and Microbial Products Department, Pharmaceutical Industries Research Division, National Research Centre, 33 El Bohouth st.(former El Tahrir st.), P.O 12622, Dokki, Cairo, Egypt
| | - Mona T Kashef
- Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University
| | - Khaled Mahmoud
- Pharmacognosy Department, Pharmaceutical Industries Research Division, National Research Centre, 33 El Bohouth st.(former El Tahrir st.), P.O 12622, Dokki, Cairo, Egypt
| | - Mona A Esawy
- Chemistry of Natural and Microbial Products Department, Pharmaceutical Industries Research Division, National Research Centre, 33 El Bohouth st.(former El Tahrir st.), P.O 12622, Dokki, Cairo, Egypt.
| | - Mohammed A Ramadan
- Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University
| |
Collapse
|
10
|
Tomei MC, Mosca Angelucci D, Clagnan E, Brusetti L. Anaerobic biodegradation of phenol in wastewater treatment: achievements and limits. Appl Microbiol Biotechnol 2021; 105:2195-2224. [PMID: 33630152 DOI: 10.1007/s00253-021-11182-5] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 02/09/2021] [Accepted: 02/14/2021] [Indexed: 11/30/2022]
Abstract
Anaerobic biodegradation of toxic compounds found in industrial wastewater is an attractive solution allowing the recovery of energy and resources but it is still challenging due to the low kinetics making the anaerobic process not competitive against the aerobic one. In this review, we summarise the present state of knowledge on the anaerobic biodegradation process for phenol, a typical target compound employed in toxicity studies on industrial wastewater treatment. The objective of this article is to provide an overview on the microbiological and technological aspects of anaerobic phenol degradation and on the research needs to fill the gaps still hindering the diffusion of the anaerobic process. The first part is focused on the microbiology and extensively presents and characterises phenol-degrading bacteria and biodegradation pathways. In the second part, dedicated to process feasibility, anaerobic and aerobic biodegradation kinetics are analysed and compared, and strategies to enhance process performance, i.e. advanced technologies, bioaugmentation, and biostimulation, are critically analysed and discussed. The final section provides a summary of the research needs. Literature data analysis shows the feasibility of anaerobic phenol biodegradation at laboratory and pilot scale, but there is still a consistent gap between achieved aerobic and anaerobic performance. This is why current research demand is mainly related to the development and optimisation of powerful technologies and effective operation strategies able to enhance the competitiveness of the anaerobic process. Research efforts are strongly justified because the anaerobic process is a step forward to a more sustainable approach in wastewater treatment.Key points• Review of phenol-degraders bacteria and biodegradation pathways.• Anaerobic phenol biodegradation kinetics for metabolic and co-metabolic processes.• Microbial and technological strategies to enhance process performance.
Collapse
Affiliation(s)
- M Concetta Tomei
- Water Research Institute, C.N.R., Via Salaria km 29.300, CP 10, 00015, Monterotondo Stazione Rome, Italy.
| | - Domenica Mosca Angelucci
- Water Research Institute, C.N.R., Via Salaria km 29.300, CP 10, 00015, Monterotondo Stazione Rome, Italy
| | - Elisa Clagnan
- Ricicla Group - DiSAA, University of Milan, Via Celoria 2, 20133, Milano, Italy
| | - Lorenzo Brusetti
- Faculty of Science and Technology, Free University of Bozen - Bolzano, Piazza Università 5, 39100, Bolzano, Italy
| |
Collapse
|
11
|
Surkatti R, Al Disi ZA, El-Naas MH, Zouari N, Van Loosdrecht MCM, Onwusogh U. Isolation and Identification of Organics-Degrading Bacteria From Gas-to-Liquid Process Water. Front Bioeng Biotechnol 2021; 8:603305. [PMID: 33520959 PMCID: PMC7844201 DOI: 10.3389/fbioe.2020.603305] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2020] [Accepted: 11/30/2020] [Indexed: 11/24/2022] Open
Abstract
The gas-to-liquid (GTL) process generates considerable amounts of wastewater that are highly acidic and characterized by its high chemical oxygen demand (COD) content, due to the presence of several organic pollutants, such as alcohols, ketones, aldehydes, and fatty acids. The presence of these organics in the process water may lead to adverse effect on the environment and aquatic life. Thus, it is necessary to reduce the COD content of GTL process water to an acceptable limit before discharging or reusing the treated water. Due to several advantages, biological treatment is often utilized as the main step in GTL process water treatment plants. In order to have a successful biotreatment process, it is required to choose effective and suitable bacterial strains that have the ability to degrade the organic pollutants in GTL process water. In this work, bacterial strains were isolated from the GTL process water, identified by 16S rRNA gene sequencing and then used in the biodegradation process. The detailed identification of the strains confirmed the presence of three organics-degrading bacteria identified as Alcaligenes faecalis, Stenotrophomonas sp., and Ochrobactrum sp. Furthermore, biodegradation experiments were carried out and confirmed that the pure culture as well as the mixed culture consortium of the bacterial strains has the ability to reduce the organic pollutants in GTL process water. However, the growth rate and biodegradation efficiency depend on the type of strains and the initial COD content. Indeed, the removal percentage and growth rate were enhanced after 7 days for all cultures and resulted in COD reduction up to 60%. Moreover, the mixed culture of bacterial strains can tolerate and treat GTL process water with a variety of ranges of COD contents.
Collapse
Affiliation(s)
- Riham Surkatti
- Gas Processing Center, Qatar University, Doha, Qatar.,Department of Biotechnology, Delft University of Technology, Delft, Netherlands
| | - Zulfa A Al Disi
- Department of Biological & Environmental Sciences, College of Arts Sciences, Qatar University, Doha, Qatar
| | | | - Nabil Zouari
- Department of Biological & Environmental Sciences, College of Arts Sciences, Qatar University, Doha, Qatar
| | | | | |
Collapse
|
12
|
Li H, Tan J, Sun T, Wang Y, Meng F. Acclimation of Isochrysis galbana Parke (Isochrysidaceae) for enhancing its tolerance and biodegradation to high-level phenol in seawater. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 207:111571. [PMID: 33254419 DOI: 10.1016/j.ecoenv.2020.111571] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 10/23/2020] [Accepted: 10/26/2020] [Indexed: 06/12/2023]
Abstract
Marine microalgae with high removal efficiency of phenol are needed for the remediation of polluted seawater in cases involving phenol spills. To achieve this purpose, adaptive laboratory evolution (ALE) was performed by a microalga Isochrysis galbana Parke MACC/H59, which is capable of degrading phenol at concentrations of less than 100 mg L-1 in 4 d. Two acclimation conditions were used: (i) 90 d at 100 mg L-1 phenol, and (ii) 90 d at 100 mg L-1 phenol followed by another 90 d at 200 mg L-1 phenol. By doing so, two strains (PAS-1 and PAS-2) could be obtained respectively. They grew rapidly at phenol concentrations up to 200 mg L-1 and 300 mg L-1, respectively, with a specific growth rate 2.52-3.40 times and 1.93-3.23 times that of the control (without phenol). Also, both strains had a higher removal capacity of phenol than the unacclimated alga. Phenol at an initial concentration of 200 mg L-1 was completely removed in 5 d thereby. For 300 mg L-1 phenol, a removal efficiency of 92% was achieved in 10 days by using PAS-2, with a removal rate constant of 30.01 d-1 (about twice that of PAS-1) and a half-life of 4.90 d (about half that of PAS-1), showing that a better strain may be obtained by extending the acclimation time. The enhancement of phenol biodegradation can be explained by the elevated activity of phenol hydroxylase (PH) in both strains. These results indicated that ALE could be an efficient tool used to enhance the tolerance and biodegradation of marine microalgae to phenol in seawater.
Collapse
Affiliation(s)
- Hao Li
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Ocean University of China, Qingdao 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao 266100, China
| | - Jun Tan
- National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing 100194, China
| | - Tianli Sun
- National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing 100194, China
| | - Yuejie Wang
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Ocean University of China, Qingdao 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao 266100, China
| | - Fanping Meng
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Ocean University of China, Qingdao 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao 266100, China.
| |
Collapse
|
13
|
Yuan K, Li S, Zhong F. Treatment of coking wastewater in biofilm-based bioaugmentation process: Biofilm formation and microbial community analysis. JOURNAL OF HAZARDOUS MATERIALS 2020; 400:123117. [PMID: 32574876 DOI: 10.1016/j.jhazmat.2020.123117] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2019] [Revised: 05/22/2020] [Accepted: 06/02/2020] [Indexed: 06/11/2023]
Abstract
Coking wastewater (CWW) containing complicated organic compositions and strong toxicity cause potential hazards to natural water bodies as well as human health. The aim of this study was integrating newly isolated Comamonas sp. ZF-3, biofilm-based bioaugmentation and fluidized bed reactor into an anoxic filter-fluidized bed reactor (AF-FBR) system to treat actual CWW. The results showed that 93 % of chemical oxygen demand (COD) and 97 % of ammonia nitrogen (NH4+-N) removal efficiency were achieved with hydraulic retention time of 70 h. The main pollutants including phenolic compounds, heterocyclic compounds and polycyclic aromatic hydrocarbons could be removed via biofilm-based process in AF-FBR. The formation of carrier biofilm was consistent with the system performance as well as the biofilm community evolution, during which the microbial community was gradually dominated by some functional genus (e.g., Comamonas, Thiobacillus, Pseudomonas and Thauera), meanwhile, ammonium-oxidizing bacteria Nitrosomonas, nitrite-oxidizing bacteria Nitrospira and denitrifiers (e.g., Pseudomonas, Thiobacillus and Bacillus) coexisted in biofilm to form a microbial community for biological nitrogen removal. Such microbial community structure explained the observed simultaneous removal of COD and NH4+-N in the AF-FBR.
Collapse
Affiliation(s)
- Ke Yuan
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China
| | - Suqin Li
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China.
| | - Fa Zhong
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China
| |
Collapse
|
14
|
Duraisamy P, Sekar J, Arunkumar AD, Ramalingam PV. Kinetics of Phenol Biodegradation by Heavy Metal Tolerant Rhizobacteria Glutamicibacter nicotianae MSSRFPD35 From Distillery Effluent Contaminated Soils. Front Microbiol 2020; 11:1573. [PMID: 32760369 PMCID: PMC7373764 DOI: 10.3389/fmicb.2020.01573] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 06/17/2020] [Indexed: 11/13/2022] Open
Abstract
Biodegradation of phenol using bacteria is recognized as an efficient, environmentally friendly and cost-effective approach for reducing phenol pollutants compared to the current conventional physicochemical processes adopted. A potential phenol degrading bacterial strain Glutamicibacter nicotianae MSSRFPD35 was isolated and identified from Canna indica rhizosphere grown in distillery effluent contaminated sites. It showed high phenol degrading efficiency up to 1117 mg L–1 within 60 h by the secretion of catechol 1,2-dioxygenase via ortho intradial pathway. The strain MSSRFPD35 possess both the catechol 1,2 dioxygenase and catechol 2,3 dioxygenase coding genes that drive the ortho and meta pathways, but the enzymatic assay revealed that the strain cleaves catechol via ortho pathway. Haldane’s kinetic method was well fit to exponential growth data and the following kinetic parameter was obtained: μ∗ = 0.574 h–1, Ki = 268.1, Ks = 20.29 mg L–1. The true μmax and Sm were calculated as 0.37 h–1 and 73.76 mg L–1, respectively. The Haldane’s constant values were similar to earlier studies and healthy fitness depicted in correlation coefficient value R2 of 0.98. Phenol degrading kinetic’s was predicted using Haldane’s model as qmax 0.983, Ki′ 517.5 and Ks′ 9.152. Further, MSSRFPD35 was capable of utilizing different monocyclic and polycyclic aromatic hydrocarbons and to degrade phenol in the presence of different heavy metals. This study for the first time reports high phenol degrading efficiency of G. nicotianae MSSRFPD35 in the presence of toxic heavy metals. Thus, the strain G. nicotianae MSSRFPD35 can be exploited for the bioremediation of phenol and its derivatives polluted environments, co-contaminated with heavy metals.
Collapse
Affiliation(s)
- Purushothaman Duraisamy
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Jegan Sekar
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Anu D Arunkumar
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Prabavathy V Ramalingam
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| |
Collapse
|
15
|
Yuan K, Li S, Zhong F. Characterization of a newly isolated strain Comamonas sp. ZF-3 involved in typical organics degradation in coking wastewater. BIORESOURCE TECHNOLOGY 2020; 304:123035. [PMID: 32111454 DOI: 10.1016/j.biortech.2020.123035] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Revised: 02/13/2020] [Accepted: 02/15/2020] [Indexed: 06/10/2023]
Abstract
The aim of this study was to investigate the characteristic of a newly isolated strain Comamonas sp. ZF-3 involved in typical organics degradation in coking wastewater (CWW). The results showed that the isolated strain had efficient biodegradability of phenolic compounds and heterocyclic compounds in CWW, meanwhile, phenol and indole could be respectively used as sole carbon source for its growth, which demonstrated the bioaugmentation potential of the isolated strain in CWW treatment. During phenol and indole degradation processes, part of metabolites (e.g., 2,3-hexanedione, 2-ethyl-1-hexanol, nonanal, 2-propyl-1-heptanol, butanoic acid, butyl ester and butanoic acid, anhydride) remained in effluents, with NH4+-N concentration having no obvious reduction, which implied the biological treatment of CWW should be accomplished by complex microbial communities in many steps.
Collapse
Affiliation(s)
- Ke Yuan
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China
| | - Suqin Li
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China.
| | - Fa Zhong
- School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing 100083, China
| |
Collapse
|
16
|
Li H, Meng F, Duan W, Lin Y, Zheng Y. Biodegradation of phenol in saline or hypersaline environments by bacteria: A review. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 184:109658. [PMID: 31520955 DOI: 10.1016/j.ecoenv.2019.109658] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2019] [Revised: 07/27/2019] [Accepted: 09/05/2019] [Indexed: 06/10/2023]
Abstract
With the continuous demand from industry for chemical raw materials, a large amount of high-salinity wastewater containing phenol is discharged into the aquatic environment, and the leakage of dangerous chemicals into the sea may lead to phenol pollution of the ocean. Phenol is a common chemical posing serious environmental hazard. Biodegradation is an effective, low-cost, environment-friendly method of removing phenol from water, but in hypersaline environments, traditional freshwater organisms are less efficacious. Here, at least 17 genera of bacteria from three phyla are found that can degrade phenol in different saline environments. The sources and taxonomy of halotolerant and halophilic bacteria are reviewed. Moreover, the pathway of phenol removal, kinetics of biodegradation, influencing factors, and recent treatment processes of wastewater are discussed.
Collapse
Affiliation(s)
- Hao Li
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China
| | - Fanping Meng
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China.
| | - Weiyan Duan
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China
| | - Yufei Lin
- National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing, 100194, China
| | - Yang Zheng
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China; National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing, 100194, China
| |
Collapse
|
17
|
Hassan M, Essam T, Mira A, Megahed S. Biomonitoring detoxification efficiency of an algal-bacterial microcosm system for treatment of coking wastewater: Harmonization between Chlorella vulgaris microalgae and wastewater microbiome. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 677:120-130. [PMID: 31055095 DOI: 10.1016/j.scitotenv.2019.04.304] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2019] [Revised: 04/20/2019] [Accepted: 04/20/2019] [Indexed: 06/09/2023]
Abstract
Nowadays, due to worldwide water shortage, water utilities are forced to re-evaluate treated wastewater. Consequently, wastewater treatment plants need to conduct biomonitoring. Coking wastewater (CWW) has toxic, mutative and carcinogenic components with threatening effect on the environment. CWW was selected as a model for complex highly toxic industrial wastewater that should be treated. CWW from Egypt was treated in a nine-liter photobioreactor using an algal-bacterial system. The photobioreactor was operated for 154 days changing different parameters (toxic load and light duration) for optimization. Optimized conditions achieved significant reduction (45%) in the operation cost. The algal-bacterial system was monitored using chemical assays (chemical oxygen demand and phenol analysis), bioassays (phytotoxicity, Artemia-toxicity, cytotoxicity, algal-bacterial ratio and settleability) and Illumina-MiSeq sequencing of 16S rRNA gene. The algal-bacterial system detoxified (in terms of phytotoxicity, cytotoxicity and Artemia-toxicity) CWW introduced as influent through all phases. A significant difference was recorded in the microbial diversity between influent and effluent samples. Four phyla dominated influent samples; Proteobacteria (77%), Firmicutes (11%), Bacteroidetes (5%) and Deferribacteres (3%) compared to only two in effluent samples; Proteobacteria (66%) and Bacteroidetes (26%). The significant relative-abundance of versatile aromatic degraders (Comamonadaceae and Pseudomonadaceae families) in influent samples conformed to the nature of CWW. Microbial community shifted and promoted the activity of catabolically versatile and xenobiotics degrading families (Chitinophagaceae and Xanthomonadaceae). Co-culture of microalgae had a positive effect on the biodegrading bacteria that was reflected by enhanced treatment efficiency, significant increase in relative abundance of bacterial genera with cyanide-decomposing potential and negative effect on waterborne pathogens.
Collapse
Affiliation(s)
- Mariam Hassan
- Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt.
| | - Tamer Essam
- Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt
| | - Alex Mira
- Department of Genomics and Health, Center for Advanced Research in Public Health, FISABIO Foundation, Valencia, Spain
| | - Salwa Megahed
- Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt; Department of Microbiology and Immunology, Faculty of Pharmacy, October University for Modern Sciences and Arts (MSA), Cairo, Egypt
| |
Collapse
|
18
|
Hassan M, Essam T, Megahed S. Illumina sequencing and assessment of new cost-efficient protocol for metagenomic-DNA extraction from environmental water samples. Braz J Microbiol 2018; 49 Suppl 1:1-8. [PMID: 29631893 PMCID: PMC6328898 DOI: 10.1016/j.bjm.2018.03.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2017] [Accepted: 03/14/2018] [Indexed: 10/24/2022] Open
Abstract
In this study, the development and assessment of a modified, efficient, and cost-efficient protocol for mDNA (metagenomic DNA) extraction from contaminated water samples was attempted. The efficiency of the developed protocol was investigated in comparison to a well-established commercial kit (Epicentre, Metagenomic DNA Isolation Kit for Water). The comparison was in terms of degree of shearing, yield, purity, duration, suitability for polymerase chain reaction and next-generation sequencing in addition to the quality of next-generation sequencing data. The DNA yield obtained from the developed protocol was 2.6 folds higher than that of the commercial kit. No significant difference in the alpha (Observed species, Chao1, Simpson and PD whole tree) and beta diversity was found between the DNA samples extracted by the commercial kit and the developed protocol. The number of high-quality sequences of the samples extracted by the developed method was 20% higher than those obtained by the samples processed by the kit. The developed economic protocol successfully yielded high-quality pure mDNA compatible with complex molecular applications. Thus we propose the developed protocol as a gold standard for future metagenomic studies investigating a large number of samples.
Collapse
Affiliation(s)
- Mariam Hassan
- Cairo University, Faculty of Pharmacy, Department of Microbiology and Immunology, Cairo, Egypt.
| | - Tamer Essam
- Cairo University, Faculty of Pharmacy, Department of Microbiology and Immunology, Cairo, Egypt
| | - Salwa Megahed
- Cairo University, Faculty of Pharmacy, Department of Microbiology and Immunology, Cairo, Egypt; October University for Modern Sciences and Arts (MSA), Faculty of Pharmacy, Department of Microbiology and Immunology, Cairo, Egypt
| |
Collapse
|
19
|
Zhu J, Chen L, Zhang Y, Zhu X. Revealing the anaerobic acclimation of microbial community in a membrane bioreactor for coking wastewater treatment by Illumina Miseq sequencing. J Environ Sci (China) 2018; 64:139-148. [PMID: 29478633 DOI: 10.1016/j.jes.2017.06.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2016] [Revised: 03/29/2017] [Accepted: 06/01/2017] [Indexed: 06/08/2023]
Abstract
The dynamic change of microbial community during sludge acclimation from aerobic to anaerobic in a MBR for coking wastewater treatment was revealed by Illumina Miseq sequencing in this study. The diversity of both Bacteria and Archaea showed an increase-decrease trajectory during acclimation, and exhibited the highest at the domestication interim. Ignavibacteria changed from a tiny minority (less than 1%) to the dominant bacterial group (54.0%) along with acclimation. The relative abundance of Betaproteobacteria kept relatively steady, as in this class some species increased coupled with some other species decreased during acclimation. The dominant Archaea shifted from Halobacteria in initial aerobic sludge to Methanobacteria in the acclimated anaerobic sludge. The dominant bacterial and archaeal groups in different acclimation stages were indigenous microorganisms in the initial sludge, though some of them were very rare. This study supported that the species in "rare biosphere" might eventually become dominant in response to environmental change.
Collapse
Affiliation(s)
- Jiadi Zhu
- School of Environment, Tsinghua University, Beijing 100084, China.
| | - Lujun Chen
- School of Environment, Tsinghua University, Beijing 100084, China; Zhejiang Provincial Key Laboratory of Water Science and Technology, Department of Environmental Technology and Ecology, Yangtze Delta Region Institute of Tsinghua University, Zhejiang, Jiaxing 314050, China
| | - Yan Zhang
- School of Environmental and Civil Engineering, Jiangnan University, Wuxi 214122, China.
| | - Xiaobiao Zhu
- College of Chemical Engineering, Beijing University of Chemical Technology, Beijing 100029, China
| |
Collapse
|
20
|
Sommaggio LRD, Mazzeo DEC, Sant' Anna DDAES, Levy CE, Marin-Morales MA. Ecotoxicological and microbiological assessment of sewage sludge associated with sugarcane bagasse. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 147:550-557. [PMID: 28918337 DOI: 10.1016/j.ecoenv.2017.09.009] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2017] [Revised: 09/01/2017] [Accepted: 09/05/2017] [Indexed: 06/07/2023]
Abstract
Sewage sludge (SS) obtained after sewage treatment process may contain several toxic substances. Bioremediation can decrease the toxicity of the sludge, mainly when it is associated with stimulant agents, such as sugarcane bagasse (B). Samples of pure SS (SSP); SS+B; SS+Soil; and SS+B+Soil were bioremediated for 1, 3, and 6 months (T1, T2, and T3, respectively). After each period, the cytotoxic, genotoxic, and mutagenic potentials of the solid samples and their respective aqueous extracts (aqueous eluate and percolate water) were evaluated by the Allium cepa test. A microbiological analysis of the samples was also performed after each period tested. All solid samples of SS+B (in T1, T2, and T3) and the solid sample of SSP (treatment T3) showed a significant decrease of cell division (cytotoxic effects). The aqueous eluate extracts of SS+B (T1 and T3) and SSP (T2 and T3) induced cytotoxic effect. The solid sample of SS+B (T2 and T3) and aqueous extracts of SSP (T1) were genotoxic, indicating a harmful effect of SS on A. cepa, even after 6 months of bioremediation. There was an alternation in the microbial community both in diversity and in abundance, with the predominance of nonfermenting gram-negative bacilli. The tested bioremediation periods were not sufficient for the complete detoxification of SS, and the use of B did not seem to contribute to the degradation of the pollutants to inert compounds. These data emphasize that a specific relationship should exist between the sludge characteristic and the biostimulating agent used to promote a more efficient bioremediation. These results suggest the necessity to study longer periods of biodegradation and the use of other decomposing agents for greater safety and sustainability for the agricultural use of this residue.
Collapse
Affiliation(s)
- Lais Roberta Deroldo Sommaggio
- Department of Biology, Institute of Biosciences, São Paulo State University (Unesp), Av. 24-A, 1515, 13506-900 Rio Claro, SP, Brazil.
| | - Dânia Elisa Christofoletti Mazzeo
- Department of Analytical Chemistry, Institute of Chemistry, São Paulo State University (Unesp), Rua Professor Francisco Degni, 55, 14800-060, Araraquara, SP, Brazil.
| | - Débora de Andrade E Silva Sant' Anna
- Department of Clinical Pathology, Faculty of Medical Sciences, State University of Campinas (UNICAMP), Rua Alexander Fleming, 105, 13081-970 Campinas, SP, Brazil.
| | - Carlos Emílio Levy
- Department of Clinical Pathology, Faculty of Medical Sciences, State University of Campinas (UNICAMP), Rua Alexander Fleming, 105, 13081-970 Campinas, SP, Brazil.
| | - Maria Aparecida Marin-Morales
- Department of Biology, Institute of Biosciences, São Paulo State University (Unesp), Av. 24-A, 1515, 13506-900 Rio Claro, SP, Brazil.
| |
Collapse
|
21
|
Jadhav K, Jadhav I. Sulfur oxidation by Achromobacter xylosoxidans strain wsp05 reveals ecological widening over which thiotrophs are distributed. World J Microbiol Biotechnol 2017; 33:192. [PMID: 28975472 DOI: 10.1007/s11274-017-2359-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Accepted: 09/26/2017] [Indexed: 10/18/2022]
Abstract
Achromobacter xylosoxidans is a versatile bacterium known for its ability to degrade aromatic compounds. However, its ability to oxidize sulfur compounds for electron and energy source is not reported much. In the present work, the Gram-negative bacterium Achromobacter xylosoxidans strain wsp05 isolated from a waste stabilization ponds (WSPs) system was studied for its ability to oxidize reduced sulfur compounds. The strain was able to oxidize thiosulfate and sodium sulfite. To observe the effect of physicochemical parameters on the rate of sulfur oxidation, strain wsp05 was grown in thiosulfate (20 mM) containing minimal salt medium at varied pH, temperature and ammonium and phosphate ions concentration. Maximum thiosulfate oxidation was observed at 30 °C with initial pH of 7-7.2. The strain was characterized using universal 16S rRNA gene primers revealing high similarity (> 99%) with Achromobacter xylosoxidans NBRC 15126T belonging to β-proteobacteria. In the present study, we investigated the sulfur oxidation properties of the Achromobacter xylosoxidans strain wsp05, which revealed an ecological and phylogenetic widening over which the thiotrophs are distributed.
Collapse
Affiliation(s)
- Kapilesh Jadhav
- School of Studies in Botany, Vikram University Ujjain, Ujjain, 456010, India. .,School of Life Sciences, Jaipur National University, Jaipur, 302017, India.
| | - Indrani Jadhav
- School of Studies in Botany, Vikram University Ujjain, Ujjain, 456010, India.,School of Life Sciences, Jaipur National University, Jaipur, 302017, India
| |
Collapse
|
22
|
The influence of different modes of bioreactor operation on the efficiency of phenol degradation by Rhodococcus UKMP-5M. RENDICONTI LINCEI-SCIENZE FISICHE E NATURALI 2016. [DOI: 10.1007/s12210-016-0567-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
23
|
Biodegradation of ketoprofen using a microalgal–bacterial consortium. Biotechnol Lett 2016; 38:1493-502. [DOI: 10.1007/s10529-016-2145-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2016] [Accepted: 05/24/2016] [Indexed: 10/21/2022]
|
24
|
Optimization of rhamnolipid production by biodegrading bacterial isolates using Plackett–Burman design. Int J Biol Macromol 2016; 82:573-9. [DOI: 10.1016/j.ijbiomac.2015.09.057] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2015] [Revised: 09/02/2015] [Accepted: 09/27/2015] [Indexed: 11/22/2022]
|
25
|
|
26
|
Geng Y, Deng Y, Chen F, Jin H, Tao K, Hou T. Biodegradation of isopropanol by a solvent-tolerant Paracoccus denitrificans strain. Prep Biochem Biotechnol 2015; 45:491-9. [PMID: 24840098 DOI: 10.1080/10826068.2014.923452] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
The biodegradation of high concentration isopropanol (2-propanol, IPA) at 16 g/L was investigated by a solvent-tolerant strain of bacteria identified as Paracoccus denitrificans for the first time by 16S rDNA gene sequencing. The strain P. denitrificans GH3 was able to utilize the high concentration of IPA as the sole carbon source within a minimal salts medium with a cell density of 1.5×10(8) cells/mL. The optimal conditions were found as follows: initial pH 7.0, incubation temperature 30°C, with IPA concentration 8 g/L. Under the optimal conditions, strain GH3 utilized 90.3% of IPA in 7 days. Acetone, the major intermediate of aerobic IPA biodegradation, was also monitored as an indicator of microbial IPA utilization. Both IPA and acetone were completely removed from the medium following 216 hr and 240 hr, respectively. The growth of strain GH3 on IPA as a sole carbon and energy source was well described by the Andrews model with a maximum growth rate (μmax)=0.0277/hr, a saturation constant (KS)=0.7333 g/L, and an inhibition concentration (Ki)=8.9887 g/L. Paracoccus denitrificans GH3 is considered to be well used in degrading IPA in wastewater.
Collapse
Affiliation(s)
- Yucong Geng
- a Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education , College of Life Sciences, Sichuan University , Chengdu , P.R. China
| | | | | | | | | | | |
Collapse
|
27
|
Essam T, ElRakaiby M, Agha A. Remediation of the effect of adding cyanides on an algal/bacterial treatment of a mixture of organic pollutants in a continuous photobioreactor. Biotechnol Lett 2014; 36:1773-81. [DOI: 10.1007/s10529-014-1557-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2014] [Accepted: 05/13/2014] [Indexed: 10/25/2022]
|
28
|
Cao J, Lai Q, Li G, Shao Z. Pseudopedobacter beijingensis gen. nov., sp. nov., isolated from coking wastewater activated sludge, and reclassification of Pedobacter saltans as Pseudopedobacter saltans comb. nov. Int J Syst Evol Microbiol 2014; 64:1853-1858. [PMID: 24573160 DOI: 10.1099/ijs.0.053991-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A taxonomic study was carried out on strain GCS-AE-31(T), which was isolated from a phenol-degrading consortium, enriched from coking wastewater activated sludge of the Beijing Shougang Company Limited during the screening of phenol-degrading bacteria. Cells of strain GCS-AE-31(T) were Gram-stain-negative, short rods, motile by gliding, oxidase- and catalase-positive. Growth was observed at salinities of 0-3% and at temperatures of 10-37 °C. On the basis of 16S rRNA gene sequence similarity, strain GCS-AE-31(T) was most closely related to Pedobacter saltans LMG 10337(T) (96.17%), but it showed low similarity to all other species of the genus Pedobacter (89.28-92.45%). It also showed low 16S rRNA gene similarity to all other species of the family Sphingobacteriaceae (87.25-92.45%) examined. The dominant fatty acids were iso-C(15 : 0), summed feature 3 (C(16 : 1)ω7c/C(16 : 1)ω6c), anteiso-C(15 : 0) and iso-C(17 : 0) 3-OH. The menaquinones were MK-7 (95.5%) and MK-6 (4.5%). The polar lipids were phosphatidylethanolamine, three aminolipids and three unknown phospholipids. Sphingolipid was present. The G+C content of the chromosomal DNA was 36.2 mol%. According to its phylogenetic position and phenotypic traits, the novel strain could not be assigned to the genus Pedobacter; it should be classified as representing a novel species of a novel genus in the family Sphingobacteriaceae, for which the name Pseudopedobacter beijingensis gen. nov., sp. nov. is proposed (type strain GCS-AE-31(T) = MCCC 1A01299(T) = CGMCC 1.12329(T) = LMG 27180(T)). The misclassified species Pedobacter saltans is transferred to the novel genus as Pseudopedobacter saltans comb. nov. (type strain LMG 10337(T) = MCCC 1A06472(T) = DSM 12145(T) = CCUG 39354(T) = CIP 105500(T) = JCM 21818(T) = NBRC 100064(T)).
Collapse
Affiliation(s)
- Junwei Cao
- State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China.,School of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin 150090, PR China
| | - Qiliang Lai
- State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China
| | - Guizhen Li
- State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China
| | - Zongze Shao
- State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China.,School of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin 150090, PR China
| |
Collapse
|
29
|
Basak B, Bhunia B, Dutta S, Chakraborty S, Dey A. Kinetics of phenol biodegradation at high concentration by a metabolically versatile isolated yeast Candida tropicalis PHB5. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2014; 21:1444-1454. [PMID: 23917743 DOI: 10.1007/s11356-013-2040-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2013] [Accepted: 07/23/2013] [Indexed: 06/02/2023]
Abstract
A highly tolerant phenol-degrading yeast strain PHB5 was isolated from wastewater effluent of a coke oven plant and identified as Candida tropicalis based on phylogenetic analysis. Biodegradation experiments with C. tropicalis PHB5 showed that the strain was able to utilize 99.4% of 2,400 mg l(-1) phenol as sole source of carbon and energy within 48 h. Strain PHB5 was also observed to grow on 18 various aromatic hydrocarbons. Haldane model was used to fit the exponential growth data and the following kinetic parameters were obtained: μ max = 0.3407 h(-1), K S = 15.81 mg l(-1), K i = 169.0 mg l(-1) (R (2) = 0.9886). The true specific growth rate, calculated from μ max, was 0.2113. A volumetric phenol degradation rate (V max) was calculated by fitting the phenol consumption data with Gompertz model and specific degradation rate (q) was calculated from V max. The q values were fitted with Haldane model, yielding following parameters: q max = 0.2766 g g(-1) h(-1), K S ' = 2.819 mg l(-1), K i ' = 2,093 (R (2) = 0.8176). The yield factor (Y X/S ) varied between 0.185 to 0.96 g g(-1) for different initial phenol concentrations. Phenol degradation by the strain proceeded through a pathway involving production of intermediates such as catechol and cis,cis-muconic acid which were identified by enzymatic assays and HPLC analysis.
Collapse
Affiliation(s)
- Bikram Basak
- Department of Biotechnology, National Institute of Technology Durgapur, Mahatma Gandhi Avenue, Durgapur, 713209, India
| | | | | | | | | |
Collapse
|
30
|
Cadmium increases catechol 2,3-dioxygenase activity in Variovorax sp. 12S, a metal-tolerant and phenol-degrading strain. Antonie van Leeuwenhoek 2013; 104:845-53. [DOI: 10.1007/s10482-013-9997-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2013] [Accepted: 08/05/2013] [Indexed: 11/26/2022]
|
31
|
Hydroquinone: environmental pollution, toxicity, and microbial answers. BIOMED RESEARCH INTERNATIONAL 2013; 2013:542168. [PMID: 23936816 PMCID: PMC3727088 DOI: 10.1155/2013/542168] [Citation(s) in RCA: 98] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2013] [Accepted: 06/20/2013] [Indexed: 12/12/2022]
Abstract
Hydroquinone is a major benzene metabolite, which is a well-known haematotoxic and carcinogenic agent associated with malignancy in occupational environments. Human exposure to hydroquinone can occur by dietary, occupational, and environmental sources. In the environment, hydroquinone showed increased toxicity for aquatic organisms, being less harmful for bacteria and fungi. Recent pieces of evidence showed that hydroquinone is able to enhance carcinogenic risk by generating DNA damage and also to compromise the general immune responses which may contribute to the impaired triggering of the host immune reaction. Hydroquinone bioremediation from natural and contaminated sources can be achieved by the use of a diverse group of microorganisms, ranging from bacteria to fungi, which harbor very complex enzymatic systems able to metabolize hydroquinone either under aerobic or anaerobic conditions. Due to the recent research development on hydroquinone, this review underscores not only the mechanisms of hydroquinone biotransformation and the role of microorganisms and their enzymes in this process, but also its toxicity.
Collapse
|
32
|
Genome implosion elicits host-confinement in Alcaligenaceae: evidence from the comparative genomics of Tetrathiobacter kashmirensis, a pathogen in the making. PLoS One 2013; 8:e64856. [PMID: 23741407 PMCID: PMC3669393 DOI: 10.1371/journal.pone.0064856] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2013] [Accepted: 04/19/2013] [Indexed: 11/24/2022] Open
Abstract
This study elucidates the genomic basis of the evolution of pathogens alongside free-living organisms within the family Alcaligenaceae of Betaproteobacteria. Towards that end, the complete genome sequence of the sulfur-chemolithoautotroph Tetrathiobacter kashmirensis WT001T was determined and compared with the soil isolate Achromobacter xylosoxidans A8 and the two pathogens Bordetella bronchiseptica RB50 and Taylorella equigenitalis MCE9. All analyses comprehensively indicated that the RB50 and MCE9 genomes were almost the subsets of A8 and WT001T, respectively. In the immediate evolutionary past Achromobacter and Bordetella shared a common ancestor, which was distinct from the other contemporary stock that gave rise to Tetrathiobacter and Taylorella. The Achromobacter-Bordetella precursor, after diverging from the family ancestor, evolved through extensive genome inflation, subsequent to which the two genera separated via differential gene losses and acquisitions. Tetrathiobacter, meanwhile, retained the core characteristics of the family ancestor, and Taylorella underwent massive genome degeneration to reach an evolutionary dead-end. Interestingly, the WT001T genome, despite its conserved architecture, had only 85% coding density, besides which 578 out of its 4452 protein-coding sequences were found to be pseudogenized. Translational impairment of several DNA repair-recombination genes in the first place seemed to have ushered the rampant and indiscriminate frame-shift mutations across the WT001T genome. Presumably, this strain has just come out of a recent evolutionary bottleneck, representing a unique transition state where genome self-degeneration has started comprehensively but selective host-confinement has not yet set in. In the light of this evolutionary link, host-adaptation of Taylorella clearly appears to be the aftereffect of genome implosion in another member of the same bottleneck. Remarkably again, potent virulence factors were found widespread in Alcaligenaceae, corroborating which hemolytic and mammalian cell-adhering abilities were discovered in WT001T. So, while WT001T relatives/derivatives in nature could be going the Taylorella way, the lineage as such was well-prepared for imminent host-confinement.
Collapse
|
33
|
Guzik U, Hupert-Kocurek K, Sałek K, Wojcieszyńska D. Influence of metal ions on bioremediation activity of protocatechuate 3,4-dioxygenase from Stenotrophomonas maltophilia KB2. World J Microbiol Biotechnol 2013; 29:267-73. [PMID: 23014843 PMCID: PMC3543765 DOI: 10.1007/s11274-012-1178-z] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2012] [Accepted: 09/19/2012] [Indexed: 11/23/2022]
Abstract
The aim of this paper was to describe the effect of various metal ions on the activity of protocatechuate 3,4-dioxygenase from Stenotrophomonas maltophilia KB2. We also compared activity of different dioxygenases isolated from this strain, in the presence of metal ions, after induction by various aromatic compounds. S. maltophilia KB2 degraded 13 mM 3,4-dihydroxybenzoate, 10 mM benzoic acid and 12 mM phenol within 24 h of incubation. In the presence of dihydroxybenzoate and benzoate, the activity of protocatechuate 3,4-dioxygenase and catechol 1,2-dioxygenase was observed. Although Fe(3+), Cu(2+), Zn(2+), Co(2+), Al(3+), Cd(2+), Ni(2+) and Mn(2+) ions caused 20-80 % inhibition of protocatechuate 3,4-dioxygenase activity, the above-mentioned metal ions (with the exception of Ni(2+)) inhibited catechol 1,2-dioxygenase to a lesser extent or even activate the enzyme. Retaining activity of at least one of three dioxygenases from strain KB2 in the presence of metal ions makes it an ideal bacterium for bioremediation of contaminated areas.
Collapse
Affiliation(s)
- Urszula Guzik
- Department of Biochemistry, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, Jagiellonska 28, 40-032 Katowice, Poland.
| | | | | | | |
Collapse
|
34
|
Photosynthetic based algal-bacterial combined treatment of mixtures of organic pollutants and CO2 mitigation in a continuous photobioreactor. World J Microbiol Biotechnol 2013; 29:969-74. [DOI: 10.1007/s11274-013-1254-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2012] [Accepted: 01/02/2013] [Indexed: 11/27/2022]
|
35
|
Liu J, Wang Q, Yan J, Qin X, Li L, Xu W, Subramaniam R, Bajpai RK. Isolation and Characterization of a Novel Phenol Degrading Bacterial Strain WUST-C1. Ind Eng Chem Res 2012. [DOI: 10.1021/ie3012903] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
36
|
Substrate interactions and kinetics study of phenolic compounds biodegradation by Pseudomonas sp. cbp1-3. Biochem Eng J 2012. [DOI: 10.1016/j.bej.2012.06.008] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
37
|
Higher-level production of ascomycin (FK520) by Streptomyces hygroscopicus var. ascomyceticus irradiated by femtosecond laser. BIOTECHNOL BIOPROC E 2012. [DOI: 10.1007/s12257-012-0114-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
|
38
|
Taylor M, Ramond JB, Tuffin M, Burton S, Eley K, Cowan D. Mechanisms and Applications of Microbial Solvent Tolerance. MICROBIOLOGY MONOGRAPHS 2012. [DOI: 10.1007/978-3-642-21467-7_8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
|
39
|
Xiao Z, Huo F, Huang Y, Zhu X, Lu JR. A novel 2,3-xylenol-utilizing Pseudomonas isolate capable of degrading multiple phenolic compounds. BIORESOURCE TECHNOLOGY 2012; 104:59-64. [PMID: 22074902 DOI: 10.1016/j.biortech.2011.10.028] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2011] [Revised: 10/07/2011] [Accepted: 10/11/2011] [Indexed: 05/31/2023]
Abstract
This work characterized a novel 2,3-xylenol-utilizing Pseudomonas isolate XQ23. From 16S rRNA phylogenetic analysis, XQ23 was found to be a member of the Pseudomonas putida group. Most of its physiological characteristics also shared similarities to P. putida. Phenols were catabolized by the meta-cleavage pathway. The dependence of the specific growth rate on 2,3-xylenol concentration could be well fitted by the Haldane model, with the maximum occurring at the concentration around 180 mg l(-1). Kinetic parameters indicated that XQ23 was sensitive to 2,3-xylenol and had low affinity. Three patterns, i.e. constant, linear decline, and allometric decline, were proposed to describe the biomass yields of phenols during bacterial degradation and XQ23 under 2,3-xylenol culturing conditions followed the allometric pattern. In a mineral-salts medium supplemented with 180 mg l(-1) of 2,3-xylenol as the sole carbon and energy source, over 40% of 2,3-xylenol was turned into CO(2) to provide energy by complete oxidization.
Collapse
Affiliation(s)
- Zijun Xiao
- State Key Laboratory of Heavy Oil Processing and Center for Bioengineering & Biotechnology, China University of Petroleum, Qingdao 266555, China.
| | | | | | | | | |
Collapse
|
40
|
Daugulis AJ, Tomei MC, Guieysse B. Overcoming substrate inhibition during biological treatment of monoaromatics: recent advances in bioprocess design. Appl Microbiol Biotechnol 2011; 90:1589-608. [DOI: 10.1007/s00253-011-3229-z] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2011] [Revised: 03/09/2011] [Accepted: 03/09/2011] [Indexed: 11/29/2022]
|