Microbial community structure in aerobic and fluffy granules formed in a sequencing batch reactor supplied with 4-chlorophenol at different settling times

H-NOX Influences Biofilm Formation, Central Metabolism, and Quorum Sensing in Paracoccus denitrificans

The transition from planktonic to biofilm growth in bacteria is often accompanied by greater resistance to antibiotics and other stressors, as well as distinct alterations in physical traits, genetic activity, and metabolic restructuring. In many species, the heme nitric oxide/oxygen binding proteins (H-NOX) play an important role in this process, although the signaling mechanisms and pathways in which they participate are quite diverse and largely unknown. In Paracoccus denitrificans, deletion of the hnox gene results in a severe biofilm-deficient phenotype. Quantitative proteomics was used to assemble a comprehensive data set of P. denitrificans proteins showing altered abundance of those involved in several important metabolic pathways. Further, decreased levels of pyruvate and elevated levels of C16 homoserine lactone were detected for the Δhnox strain, associating the biofilm deficiency with altered central carbon metabolism and quorum sensing, respectively. These results expand our knowledge of the important role of H-NOX signaling in biofilm formation.

Microbial Ecology of Granular Biofilm Technologies for Wastewater Treatment: A Review

Nowadays, the discharge of wastewater is a global concern due to the damage caused to human and environmental health. Wastewater treatment has progressed to provide environmentally and economically sustainable technologies. The biological treatment of wastewater is one of the fundamental bases of this field, and the employment of new technologies based on granular biofilm systems is demonstrating success in tackling the environmental issues derived from the discharge of wastewater. The granular-conforming microorganisms must be evaluated as functional entities because their activities and functions for removing pollutants are interconnected with the surrounding microbiota. The deep knowledge of microbial communities allows for the improvement in system operation, as the proliferation of microorganisms in charge of metabolic roles could be modified by adjustments to operational conditions. This is why engineering must consider the intrinsic microbiological aspects of biological wastewater treatment systems to obtain the most effective performance. This review provides an extensive view of the microbial ecology of biological wastewater treatment technologies based on granular biofilms for mitigating water pollution.

Size-dependent influences of nanoplastics on microbial consortium differentially inhibiting 2, 4-dichlorophenol biodegradation

Nanoplastics (NPs), as a type of newly emerging pollutant, are ubiquitous in various environmental systems, one of which is coexistence with organic pollutants in wastewater, potentially influencing the pollutants' biodegradation. A knowledge gap exists regarding the influence of microbial consortium and NPs interactions on biodegradation efficiency. In this work, a 2,4-dichlorophenol (DCP) biodegradation experiment with presence of polystyrene nanoplastics (PS-NPs) with particle sizes of 100 nm (PS100) or 20 nm (PS20) was conducted to verify that PS-NPs had noticeable inhibitory effect on DCP biodegradation in a size-dependent manner. PS100 at 10 mg/L and 100 mg/L both prolonged the microbial stagnation compared to the control without PS-NPs; PS20 exacerbated greater, with PS20 at 100 mg/L causing a noticeable 6-day lag before the start-up of rapid DCP reduction. The ROS level increased to 1.4-fold and 1.8-fold under PS100 and PS20 exposure, respectively, while the elevated LDH under PS20 exposure indicated the mechanical damage to cell membrane by smaller NPs. PS-NPs exposure also resulted in a decrease in microbial diversity and altered the niches of microbial species, e.g., they decreased the abundance of some functional bacteria such as Brevundimonas and Comamonas, while facilitated some minor members to obtain more proliferation. A microbial network with higher complexity and less competition was induced to mediate PS-NPs stress. Functional metabolism responded differentially to PS100 and PS20 exposure. Specifically, PS100 downregulated amino acid metabolism, while PS20 stimulated certain pathways in response to more severe oxidative stress. Our findings give insights into PS-NPs environmental effects concerning microflora and biological degradation.

Degradation and metagenomic analysis of 4-chlorophenol utilizing multiple metal tolerant bacterial consortium

Chlorophenols are persistent environmental pollutants used in synthesizing dyes, drugs, pesticides, and other industrial products. The chlorophenols released from these processes seriously threaten the environment and human health. The present study describes 4-chlorophenol (4-CP) degradation activity and metagenome structure of a bacterial consortium enriched in a 4-CP-containing medium. The consortium utilized 4-CP as a single carbon source at a wide pH range, temperature, and in the presence of heavy metals. The immobilized consortium retained its degradation capacity for an extended period. The 4-aminoantipyrine colorimetric analysis revealed complete mineralization of 4-CP up to 200 mg/L concentration and followed the zero-order kinetics. The addition of glycerol and yeast extract enhanced the degradation efficiency. The consortium showed both ortho- and meta-cleavage activity of catechol dioxygenase. Whole genome sequence (WGS) analysis revealed the microbial compositions and functional genes related to xenobiotic degradation pathways. The identified genes were mapped on the KEGG database to construct the 4-CP degradation pathway. The results exhibited the high potential of the consortium for bioremediation of 4-CP contaminated sites. To our knowledge, this is the first report on WGS analysis of a 4-CP degrading bacterial consortium.

Metagenomic Analysis of a Continuous-Flow Aerobic Granulation System for Wastewater Treatment

Aerobic granulation is an emerging process in wastewater treatment that has the potential to accelerate sedimentation of the microbial biomass during secondary treatment. Aerobic granulation has been difficult to achieve in the continuous flow reactors (CFRs) used in modern wastewater treatment plants. Recent research has demonstrated that the alternation of nutrient-abundant (feast) and nutrient-limiting (famine) conditions is able to promote aerobic granulation in a CFR. In this study, we conducted a metagenomic analysis with the objective of characterizing the bacterial composition of the granular biomass developed in three simulated plug flow reactors (PFRs) with different feast-to-famine ratios. Phylogenetic analyses revealed a clear distinction between the bacterial composition of aerobic granules in the pilot simulated PFRs as compared with conventional activated sludge. Larger and denser granules, showing improved sedimentation properties, were observed in the PFR with the longest famine time and were characterized by a greater proportion of bacteria producing abundant extracellular polymeric substances (EPS). Functional metagenomic analysis based on KEGG pathways indicated that the large and dense aerobic granules in the PFR with the longest famine time showed increased functionalities related to secretion systems and quorum sensing, which are characteristics of bacteria in biofilms and aerobic granules. This study contributes to a further understanding of the relationship between aerobic granule morphology and the bacterial composition of the granular biomass.

Enhanced effect and mechanism of nano Fe-Ca bimetallic oxide modified substrate on Cu(II) and Ni(II) removal in constructed wetland

In this study, Fe₂O₃ nanoparticles (Fe₂O₃ NPs) and CaO NPs were loaded on the zeolite sphere carrier to create nano Fe-Ca bimetallic oxide (Fe-Ca-NBMO) modified substrate, which was introduced into constructed wetland (CW) to remove Cu(II) and Ni(II) via constructing "substrate-microorganism" system. Adsorption experiments showed that the equilibrium adsorption capacities of Fe-Ca-NBMO modified substrate for Cu(II) and Ni(II) were respectively 706.48 and 410.59 mg/kg at an initial concentration of 20 mg/L, 2.45 and 2.39 times of gravel. The Cu(II) and Ni(II) removal efficiencies in CW with Fe-Ca-NBMO modified substrate respectively reached 99.7% and 99.9% at an influent concentration of 100 mg/L, significantly higher than those in gravel-based CW (47.0% and 34.3%). Fe-Ca-NBMO modified substrate could promote Cu(II) and Ni(II) removal by increasing electrostatic adsorption, chemical precipitation, as well as the abundances of resistant microorganisms (Geobacter, Desulfuromonas, Zoogloea, Dechloromonas, and Desulfobacter) and functional genes (copA, cusABC, ABC.CD.P, gshB, and exbB). This study provided an effective method to enhance Cu(II) and Ni(II) removal of electroplating wastewater by CW with Fe-Ca-NBMO modified substrate.

Application of young maize plant residues alters the microbiome composition and its functioning in a soil under conservation agriculture: a metagenomics study

To increase our knowledge on how application of organic material alters soil microbial populations and functionality, shotgun metagenomic sequencing was used to determine the microbial communities and their potential functionality in an arable soil amended with young maize plants (Zea mays L.) in a laboratory experiment after 3 days. The relative abundance of bacterial and viral groups was strongly affected by organic material application, whereas that of the archaeal, protist and fungal groups was less affected. Cellulose degraders with copiotrophic lifestyle (e.g., Betaproteobacteria) were enriched in the amended soil, whereas the groups with slow growing oligotrophic and chemolithoautotrophic metabolism within Bacteria and Archaea were greater in the unamended than in the amended soil. The soil viral structure and richness were also affected. Caudovirales was the dominant viral family, with members of Siphoviridae enriched in the amended soil and members of Myoviridae in the unamended soil. More specialized metabolic traits related to both the degradation of complex C compounds and denitrification related genes were enriched in the young maize plant amended soil than in the unamended soil, whereas nitrification related genes were enriched in the latter. Copiotrophic life-style bacterial groups were enriched in the amended soil, whereas oligotrophic life-style bacterial groups in the unamended soil. Many bacterial and viral phylotypes were affected by the application of young maize plants, but the number of soil fungi, archaea and protists affected was smaller. Metabolic functionality was affected by the application of organic material as the relative abundance of genes involved in the denitrification process was higher in the maize plant amended soil than in the unamended soil and those involved in the nitrification process was higher in the unamended soil.

Successful application of municipal domestic wastewater as a co-substrate in 2,4,6-trichlorophenol degradation

Wastewater containing 2,4,6-trichlorophenol (2,4,6-TCP) is highly toxic and causes harmful effects on aquatic ecosystems and human health. In this study, wastewater containing high levels of 2,4,6-TCP was successfully co-metabolized by introducing municipal domestic wastewater (MDW) as the co-catabolic carbon source. The concentration of degraded 2,4,6-TCP increased from 0 to 208.71 mg/L by adjusting the influent MDW volume during a 150-day-long operation. An MDW dose of 500 mL was found optimal, with an average concentration of 250 mgCOD/L. Unlike the long-term experiment, changing the MDW adding mode in a typical cycle further increased the concentration of 2,4,6-TCP removed to 317 mg/L. The main MDW components, such as the sugars, VFAs, and slowly biodegradable organic substances, improved 2,4,6-TCP degradation, achieving a TOC removal efficiency of 90.98% and a dechlorination efficiency of 100%. The MDW level did not change the 2,4,6-TCP degradation rate (μ_TCP) in a typical cycle compared to the single carbon source, and the μ_TCP remained at a high level of 50 mg 2,4,6-TCP/h. Macrogenetic analysis demonstrated that MDW addition promoted the growth of 43 bacterial genera (41.49%) responsible for 2,4,6-TCP degradation and intermediates' metabolism. The key genes for 2,4,6-TCP metabolism (pcpA, chqB, mal-r, pcaI, pcaF, and fadA) were detected in the activated sludge, which were distributed among the 43 genera. To conclude, this study proposes a new carbon source for co-metabolism to treat 2,4,6-TCP-polluted wastewater.

Aerobic granular sludge systems for treating hypersaline pharmaceutical wastewater: Start-up, long-term performances and metabolic function

The complex organics, residue pharmaceuticals and high salinity in pharmaceutical wastewater pose great challenges to biological wastewater treatment. In this study, granular sludge process was used for treating pharmaceutical wastewater because of its high pollutant removal efficiency. The results suggested that granules could not form within 90-d cultivation when directly fed with target hypersaline pharmaceutical wastewater (R_P) due to suppression of EPS secretion by high concentration of inhibitory organics, while granules were successfully developed with hypersaline synthetic wastewater (R_S) and diluted pharmaceutical wastewater (R_D), respectively. Further comparison of pollutant removal performance from target pharmaceutical wastewater showed that simultaneous removal of organics (effluent bCOD<1 mg L^-1) and nitrogen (average TN removal efficiency of 70.3%) could be achieved in R_D. Nevertheless, long acclimation period (i.e., 20 d) was needed for granules when carbon source was shifted from simple sodium acetate to complex organic pollutants in pharmaceutical wastewater, with nitrite significantly accumulated in R_S. Analysis of microbial community and nitrogen metabolism pathway indicated the higher abundance of nitrite oxidoreductase than that in the R_S to alleviate nitrite accumulation in the R_D, and functional strains such as Paracoccus and Mycobacterium played critical roles for high efficiency of organic degradation, nitrification and denitrification.

Challenges and opportunities for the biodegradation of chlorophenols: Aerobic, anaerobic and bioelectrochemical processes

Chlorophenols (CPs) are highly toxic and refractory contaminants which widely exist in various environments and cause serious harm to human and environment health and safety. This review provides comprehensive information on typical CPs biodegradation technologies, the most green and benign ones for CPs removal. The known aerobic and anaerobic degradative bacteria, functional enzymes, and metabolic pathways of CPs as well as several improving methods and critical parameters affecting the overall degradation efficiency are systematically summarized and clarified. The challenges for CPs mineralization are also discussed, mainly including the dechlorination of polychlorophenols (poly-CPs) under aerobic condition and the ring-cleavage of monochlorophenols (MCPs) under anaerobic condition. The coupling of functional materials and degraders as well as the operation of sequential anaerobic-aerobic bioreactors and bioelectrochemical system (BES) are promising strategies to overcome some current limitations. Future perspective and research gaps in this field are also proposed, including the further understanding of microbial information and the specific role of materials in CPs biodegradation, the potential application of innovative biotechnologies and new operating modes to optimize and maximize the function of the system, and the scale-up of bioreactors towards the efficient biodegradation of CPs.

Degradation of chlorine dioxide bleaching wastewater and response of bacterial community in the intimately coupled system of visible-light photocatalysis and biodegradation

Intimate coupling of visible-light photocatalysis and biodegradation (ICPB) offers potential for degrading chlorine dioxide bleaching wastewater. In this study, we reported a TiO₂-coated sponge biofilm carrier with significant adhesion of TiO₂ and the ability to accumulate biomass in its interior. Four mechanisms possibly acting in ICPB were tested separately: adsorption of chlorine dioxide bleaching wastewater to the carrier, photolysis, photocatalysis, and biodegradation by the biofilm inside the carrier. The carrier had an adsorption capacity of 17% and 16% for CODcr and AOX, respectively, in the wastewater. The photodegradation rate of wastewater was very low and could be ignored. Both biodegradation (AOX 30.1%, CODcr 33.8%, DOC 26.2%) and photocatalysis (AOX 65.1%, CODcr 71.2%, DOC 62.3%) possessed a certain degradation efficiency of wastewater. However, the removal rate of AOX, CODcr, and DOC in wastewater treatment by protocol ICPB reached 80.3%, 90.5%, and 86.7%. FT-IR and GC-MS analysis showed that the ICPB system had photocatalytic activity on the surface of the porous carrier in vitro, which could transform organic into small molecules for microbial utilization or complete mineralization. Moreover, the biofilm in the interior of the TiO₂-coated sponge carrier could mineralize the photocatalytic products, which enhanced the removal of AOX, CODcr, and DOC by more than 15.2%, 20.0%, and 24.0%, respectively. The biofilm in the carrier of the ICPB system evolved, enriched in Proteobacteria, Chloroflexi, Bacteroidetes, and Actinobacteria, microorganisms known to play active roles in the biodegradation of papermaking wastewater.

Effects of humic acid on sludge performance, antibiotics resistance genes propagation and functional genes expression during Cu(II)-containing wastewater treatment via metagenomics analysis

The humic acid (HA) function on the sludge performance, antibiotics resistance genes (ARGs) propagation and functional genes expression during Cu(II)-containing wastewater treatment was comprehensively investigated via metagenomics analysis. Results showed that the pollutants removal was significantly inhibited after long-term exposure of 5 mg/L Cu(II), while the inhibitory effects were moderately alleviated after addition of 10 mg/L HA. The extracellular polymeric substances (EPS) production with Cu(II) acclimation was higher than the sludge with Cu(II) and HA acclimation. The microbial community was significantly affected by the HA addition, while the relative abundance of dominant ARGs had no distinct differences with or without HA addition under Cu(II) stress. The functional genes were largely implemented for microbial metabolism, while no significant differences were found with HA addition under Cu(II) stress. Thus, the HA function for ARGs propagation and functional genes expression needed to be further research under Cu(II) stress in wastewater treatment.

Impact of electrical stimulation modes on the degradation of refractory phenolics and the analysis of microbial communities in an anaerobic-aerobic-coupled upflow bioelectrochemical reactor

An electrically stimulated anaerobic-aerobic coupled system was developed to improve the biodegradation of refractory phenolics. Expected 4-nitrophenol, 2, 4-dinitrophenol, and COD removals in the system with aerobic cathodic and anaerobic anodic chambers were approximately 53.7%, 45.4%, 22.3% (intermittent mode) and 37.9%, 19.8%, 17.3% (continuous mode) higher than that in the control system (26.0 ± 6.4%, 30.7 ± 7.1%, 49.8 ± 3.0%). 2, 4-dichlorophenol removal in the system with aerobic anodic and anaerobic cathodic chambers was approximately 28.5% higher than that in the control system (71.4 ± 5.7%). The contribution of the aerobic cathodic/anodic chambers to the removal of phenolic compounds was higher than that of the anaerobic cathodic/anodic chambers. The species related to phenolic biodegradation (Rhodococcus, Achromobacter, PSB-M-3, and Sphingobium) were enriched in the cathodic and anodic chambers of the system. These results showed that intermittent electrical stimulation could be a potential alternative for the efficient degradation of refractory phenolics.

Enhancement of PPCPs removal by shaped microbial community of aerobic granular sludge under condition of low C/N ratio influent

The frequent occurrence of pharmaceuticals and personal care products (PPCPs) in domestic wastewater has caused great concern. In this study, the removal of two typical pharmaceuticals (Roxithromycin, ROX; Sulfamethoxazole, SMZ) in aerobic granular sludge (AGS) reactors was investigated under condition of different C/N (carbon to nitrogen) ratios. Results showed that higher removal efficiencies of ROX and SMZ (95.2 % and 92.9 %) were achieved in the AGS reactor fed with low C/N influent. Batch experiments further revealed that the removal of ROX was influenced by the adsorption ability of the AGS while SMZ removal was mainly enhanced by biodegradation process. Analysis of extracellular polymeric substances (EPS) showed that the humic acid-like substances were enriched under low C/N condition, which was in accordance with dynamic change of microbial community. The microbes, like Thauera spp. and Xanthomonadaceae, were highly enriched in the reactor with high nitrogen loading rate and functioned as refractory organics degrader. Overall, the AGS process could achieve enhanced pharmaceuticals removal performance by the regulation of microbial community under low C/N influent, which provides insights into a feasible solution for simultaneous removal of nitrogen and trace organic pollutants in AGS reactor.

Enhanced aerobic granulation at low temperature by stepwise increasing of salinity

High salinity and low temperature are generally considered to have negative effects on the formation, stability and performance of aerobic granular sludge (AGS). This study investigated whether and how salinity acclimation strategies can enhance aerobic granulation at low temperature (12 °C) in three sequencing batch reactors (SBRs). Stepwise increased concentrations of NaCl (2-10 and 4-20 g/L) were added to the influent of R1 and R2 with steps of 1 and 2 g/L per week respectively, while R0 was set as a control (salt-free). The granulation processes in R1 and R2 were rapidly started up within 9 days, and were completed within 21 and 18 days, respectively. By contrast, R0 took 25 days and 49 days to start and complete granulation. The salinity acclimation strategies improved sludge hydrophobicity, reduced repulsion barrier between cells, and stimulated EPS production during granulation processes, which simultaneously promoted the formation of AGS. When the influent salinity reached 14 g/L on day 35, granule hydrophobicity, density and size in R2 sharply decreased and granules began to disintegrate afterwards. When operated under salt-free condition, sludge bulking occurred in R0 since day 60. The treatment performance was thus impaired in these two reactors, especially in R2 with significant biomass loss. Conversely, the AGS developed in R1 maintained stable structure with high biomass concentration (8.0 gSS/L) and excellent treatment performance for COD (90%), ammonium (95%) and total nitrogen (70%). Genera Thauera, Azoarcus, and Nitrosomonas were more enriched, while Flavobacterium and Meganema were more suppressed in R1, which would have contributed to granule stability and treatment performance. In conclusion, great care has to be taken for cultivating and operating AGS at low temperature for treating saline wastewater. Increasing salinity with a lower salt gradient provides a possibility for rapid granulation of AGS with excellent treatment performance under such conditions.

Exploring the effects of carbon source level on the degradation of 2,4,6-trichlorophenol in the co-metabolism process

External organic sources could make up for the lack of carbon in the treatment of chlorophenol; but the impact on external carbon concentration on the degradation of 2,4,6-trichlorophenol (2,4,6-TCP) has rarely been studied. In this study, the effect of carbon addition on the degradation of 2,4,6-TCP was investigated using the lab-scale sequencing batch reactor (SBR). The results indicated that excessive carbon amounts inhibited 2,4,6-TCP degradation in the long-term operation and a typical cycle, while a suitable dosage could increase the removal of 2,4,6-TCP. The application of external carbon rapidly decreased the dissolved oxygen level of the system, resulting in inhibited chlorophenol removal. The concentration of removed 2,4,6-TCP could be increased from 35.49-152.89 mg L^-1 by adjusting the carbon dosage. At the phylum level, Proteobacteria and Acidobacteria phylum bacteria, related to 2,4,6-TCP removal, were dominant when no carbon source was added, while excessive carbon levels resulted in the overgrowth of Saccharibacteria (50.19 %), responsible for carbon metabolism. In co-metabolism systems, chlorophenol-contaminated wastewater can effectively be treated by adjusting the external carbon source.

Effect of transient pH variation on microbial activity and physical characteristics of aerobic granules treating 4-chlorophenol

Chlorophenols are inhibitory compounds that can be biodegraded by aerobic granules in discontinuous processes. Many industrial wastewaters are characterized by transient pH variation over time. These pH changes could affect the overall granule structure and microbial activity during the chlorophenol biodegradation. The objective of this research was to evaluate the effects of transient pH variation on the specific degradation rate (q), granule integrity coefficient (IC), and size in sequencing batch reactors treating 4-chlorophenol (4-CP). First, aerobic granules were acclimated for efficient 4-CP degradation (>99%). The acclimated granules consisted of 55.7% of the phyla Proteobacteria and 40.6% of Bacteroidetes. The main bacteria belong to the order Sphingobacteriales (24%), as well as Amaricoccus, Acidovorax, Shinella, Rhizobium, and Flavobacterium, some of which are new genera reported in acclimated granules degrading 4-CP. Then, pH changes were applied to the acclimated aerobic granules, observing that acid pHs decreased to a greater extent the specific degradation rate (67% to 99%) than basic pHs (34% to 80%). These pH changes caused the granule disaggregation but with lower effects on the IC. The effects of pH change were mainly on the microbial activity more than the physical characteristics of aerobic granules degrading 4-CP.

Long-term alkaline conditions inhibit the relative abundances of tetracycline resistance genes in saline 4-chlorophenol wastewater treatment

Considering the occurrence and spread of antibiotic resistance genes (ARGs) pose significant risks to public health, the effects of long-term exposure to alkaline conditions on the relative abundances of tetracycline resistance genes (TRGs) were studied in saline 4-chlorophenol (4-CP) wastewater treatment. Alkaline conditions were maintained by supplying the co-metabolic carbon source of sodium acetate. Results showed that except for the 4-CP, the removal of pollutants was significantly inhibited, and the relative abundances of the most TRGs were repressed. In addition, the removal of pollutants and the relative abundances of TRGs were moderately affected by the NaCl addition. The proteins in the extracellular polymeric substances (EPS) played key roles in reducing the relative abundances of TRGs, which were altered by the microbial diversity. In conclusion, for the pollutants removal and ARGs reduction in refractory industrial wastewater treatment, alkaline conditions should be maintained by selecting suitable co-metabolic carbon sources.

Peculiarities of biofilm formation by Paracoccus denitrificans

Most bacteria form biofilms, which are thick multicellular communities covered in extracellular matrix. Biofilms can become thick enough to be even observed by the naked eye, and biofilm formation is a tightly regulated process. Paracoccus denitrificans is a non-motile, Gram-negative bacterium that forms a very thin, unique biofilm. A key factor in the biofilm formed by this bacterium is a large surface protein named biofilm-associated protein A (BapA), which was recently reported to be regulated by cyclic diguanosine monophosphate (cyclic-di-GMP or c-di-GMP). Cyclic-di-GMP is a major second messenger involved in biofilm formation in many bacteria. Though cyclic-di-GMP is generally reported as a positive regulatory factor in biofilm formation, it represses biofilm formation in P. denitrificans. Furthermore, quorum sensing (QS) represses biofilm formation in this bacterium, which is also reported as a positive regulator of biofilm formation in most bacteria. The QS signal used in P. denitrificans is hydrophobic and is delivered through membrane vesicles. Studies on QS show that P. denitrificans can potentially form a thick biofilm but maintains a thin biofilm under normal growth conditions. In this review, we discuss the peculiarities of biofilm formation by P. denitrificans with the aim of deepening the overall understanding of bacterial biofilm formation and functions.

Application of humic acid changes the microbial communities and inhibits the expression of tetracycline resistance genes in 4-chlorophenol wastewater treatment

The occurrence and spread of antibiotic resistance genes (ARGs) are concerns that have threatened public health for many years. However, the effects of humic acid (HA) application on the expression of ARGs in chlorophenols wastewater treatment are rarely reported. In this study, we investigated the sludge performance, including the removal of pollutants, changes in the microbial communities, and the expression of tetracycline resistance genes (TRGs), to explore the function of HA in 4-chlorophenol (4-CP) wastewater treatment at different HA concentrations. The results showed that HA application did not significantly stimulate the removal of pollutants, other than the removal of PO₄^3--P. High-throughput sequencing analysis indicated that the application of HA influenced the microbial communities and changed the expression level of TRGs. Quantitative real-time PCR analysis showed that the expression of numerous TRGs (tetC, tetG, tetW, tetX, and intI1) was significantly inhibited by the application of HA (25 mg L^-1) during 4-CP wastewater treatment. In summary, HA application played an important role in treating chlorophenols wastewater and reducing the expression of TRGs. This work aimed to provide an efficient method of reducing the expression level of ARGs in industrial wastewater treatment, which has inevitable environmental significance.

Does duckweed ponds used for wastewater treatment emit or sequester greenhouse gases?

The reduction of greenhouse gases (GHG) emissions is important challenge in the wastewater treatment plants. In this way, the present study aimed to evaluate the GHG emissions and carbon dioxide fixation by duckweed ponds (DWP) applied to treat municipal wastewater in a polishing stage. Two pilot DWP (3000 L) were operated in a series with real wastewater receiving a flow rate of 200 L d^-1 and organic load rate of 39 g COD ha^-1 d^-1. Beyond the standard physicochemical parameters for wastewater monitoring, the gases emissions from pond surface were measures by using a static flux chamber with infrared probes installed inside to detect CO₂ and CH₄ concentration. Operating the DWP with a load of 18.1 kg TN ha^-1 d^-1 and 2 kg TP ha^-1 d^-1, across 425 days of monitoring, higher COD and nutrient removal efficiency was identified (79%, 93% and 84% for COD, TN and TP, respectively). The CO₂ emission rate ranged from 3048 to 6017 mg CO₂ m^-2 d^-1 and the fixation rate ranged from 19,592 to 42,052 mg CO₂ m^-2 d^-1. Methane emission was not detected (less than 0.1%). Moreover, low abundance of archaeal community was identified in both DWP. The results showed that in presented conditions, under low COD loading rate DWP could fix at least three times more CO₂ than it emits, highlighting the sustainability of this natural technology.

Coaggregation of bacterial communities in aerobic granulation and its application on the biodegradation of sulfolane

Aerobic granulation is regarded as the future technology for wastewater treatment that can replace conventional activated sludge. In this study, two approaches of forming sulfolane degrading aerobic granules (SDAG) were successfully developed and evaluated. These include adaptation of pre-grown granules to sulfolane environment and coaggregation of pre-grown granules with bacterial culture native to sulfolane contaminated site. The adaption method required a longer period to form robust SDAG compared to coaggregation method where degradation of sulfolane was observed within 24 h. Electronic images revealed dominant filamentous bacteria on the surface of granules while DNA analysis unveiled the complexity of the dynamic change of microbial community during aerobic granule formation. The rate of sulfolane degradation by coaggregated granules reduced as the concentration of carbon source increased, nevertheless, the rate increased with increased biomass. In addition, the presence of co-contaminants can slightly impact the ability of newly cultivated granules to degrade sulfolane. Finally, the stability and settleability of the new aerobic granules was investigated under different environmental conditions. About 30% of the aerobic granules were lost after 14 d of operation without any continuous supply of carbon sources. The surviving SDAGs continued to display an intact structure coupled with good settleability.

Microbial community dynamics during aerobic granulation in a sequencing batch reactor (SBR)

Microorganisms in aerobic granules formed in sequencing batch reactors (SBR) remove contaminants, such as xenobiotics or dyes, from wastewater. The granules, however, are not stable over time, decreasing the removal of the pollutant. A better understanding of the granule formation and the dynamics of the microorganisms involved will help to optimize the removal of contaminants from wastewater in a SBR. Sequencing the 16S rRNA gene and internal transcribed spacer PCR amplicons revealed that during the acclimation phase the relative abundance of Acinetobacter reached 70.8%. At the start of the granulation phase the relative abundance of Agrobacterium reached 35.9% and that of Dipodascus 89.7% during the mature granule phase. Fluffy granules were detected on day 43. The granules with filamentous overgrowth were not stable and they lysed on day 46 resulting in biomass wash-out. It was found that the reactor operation strategy resulted in stable aerobic granules for 46 days. As the reactor operations remained the same from the mature granule phase to the end of the experiment, the disintegration of the granules after day 46 was due to changes in the microbial community structure and not by the reactor operation.

Treatment of the liquid phase of digestate from a biogas plant for water reuse

Biogas plants struggle with managing nitrogen-rich digestate from manure co-digestion. In this study, the biologically treated liquid phase of digestate from an aerobic granular sludge batch reactor (GSBR) containing oxidized nitrogen forms (NO_x), phosphorus, COD and total suspended solids was post-denitrified (P-D), and then ultrafiltered. In P-D, various hydraulic retention times (from 10 to 60 h) and biomass concentrations (from 6 to 14 g MLSS/L) were tested. Then, waste glycerin (GL) was added to the P-D reactor at a COD_GL/NO_x ratio of 1.1, causing a large number of phosphate-accumulating and denitrifying Janibacter sp., and PHB-accumulating and denitrifying Paracoccus sp. and Thauera sp. to be present in granules, which improved nutrient removal. The effluent was ultrafiltered at 0.3 and 0.5 MPa. After biological treatment supported with GL and followed by ultrafiltration, the purified liquid phase of the digestate met FAO standards for water reuse for irrigation.

Physical and enzymatic properties of a new manganese peroxidase from the white-rot fungus Trametes pubescens strain i8 for lignin biodegradation and textile-dyes biodecolorization

A new manganese peroxidase-producing white-rot basidiomycete fungus was isolated from symptomatic wood of the camphor trees Cinnamomum camphora (L.) at the Hamma Botanical Garden (Algeria) and identified as Trametes pubescens strain i8. The enzyme was purified (MnP TP55) to apparent electrophoretic homogeneity and biochemically characterized. The specific activity and Reinheitzahl value of the purified enzyme were 221 U/mg and 2.25, respectively. MALDI-TOF/MS analysis revealed that the purified enzyme was a monomer with a molecular mass of 55.2 kDa. The NH₂-terminal sequence of the first 26 amino acid residues of MnP TP55 showed high similarity with those of white-rot fungal peroxidases. It revealed optimal activity at pH 5 and 40 °C. This peroxidase was completely inhibited by sodium azide and potassium cyanide, suggesting the presence of heme-components in its tertiary structure. Interestingly, MnP TP55 showed higher catalytic efficiency, organic solvent-tolerance, dye-decolorization ability, and detergent-compatibility than that of horseradish peroxidase (HRP) from roots of Armoracia rustanica, manganese peroxidase from Bjerkandera adusta strain CX-9 (MnP BA30), and manganese peroxidase from Phanerochaete chrysosporium (MnP PC). Overall, the findings provide strong support for the potential candidacy of MnP TP55 for environmental applications, mainly the development of enzyme-based technologies for lignin biodegradation, textile-dyes biodecolorization, and detergent formulations.

Effects of 4-chlorophenol wastewater treatment on sludge acute toxicity, microbial diversity and functional genes expression in an activated sludge process

In this study, the effects of 4-chlorophenol (4-CP) wastewater treatment on sludge acute toxicity of luminescent bacteria, microbial diversity and functional genes expression of Pseudomonas were explored. Results showed that in the entire operational process, the sludge acute toxicity acclimated by 4-CP in a sequencing batch bioreactor (SBR) was significantly higher than the control SBR without 4-CP. The dominant phyla in acclimated SBR were Proteobacteria and Firmicutes, which also existed in control SBR. Some identified genera in acclimated SBR were responsible for 4-CP degradation. At the stable operational stages, the functional genes expression of Pseudomonas in acclimated SBR was down-regulated at the end of SBR cycle, and their expression mechanisms needed further research. This study provides a theoretical support to comprehensively understand the sludge performance in industrial wastewater treatment.

Microbial fuel cell and membrane bioreactor coupling system: recent trends

Membrane bioreactor (MBR) and microbial fuel cell (MFC) are new technologies based on microbial process. MBR takes separation process as the core to achieve the high efficient separation and enrichment the beneficiation of microbes during the biological treatment. MFC is a novel technology based on electrochemical process to realize the mutual conversion between biomass energy and electric energy, in order to solve the problems of serious membrane fouling and low efficiency of denitrification in membrane bioreactor, the low power generation efficiency, and unavailability of bioelectric energy of MFC. In recent years, MFC-MBR coupling system emerged. It can effectively mitigate the membrane fouling and reduce the excess sludge production. Simultaneously, the electricity can be used effectively. The new coupling system has good prospects for development. In this paper, we summarized the research progresses of the two kinds of coupling systems in recent years and analyzed the coupling structure and forms. Based on the above, the future development fields of the MFC-MBR coupling system were prospected.

Effects of carbon sources on sludge performance and microbial community for 4-chlorophenol wastewater treatment in sequencing batch reactors

Considering carbon sources are often supplied to satisfy the removal of high nitrogen and refractory pollutants in industrial wastewater, two sequencing batch reactors (SBRs) were used in this study to treat 1.5 ± 0.5 mg/L 4-chlorophenol (4-CP) wastewater containing ammonium nitrogen and phosphate with different carbon sources. The favorable removal efficiencies of influent COD, NH₄⁺-N, PO₄^3--P, and 4-CP suggested that the both SBRs were not influenced by supplying dissolved starch and sodium acetate, respectively. The phyla Proteobacteria and Bacteroidetes were dominant in both SBRs, while the dominant phylum Candidatus Saccharibacteria was only existed in SBR with carbon source of dissolved starch. The relative abundance of bacterial communities had significant differences at class, family, and order level in both SBRs. And the mutually dominant genus in both SBRs was only Gemmobacter, which was first found in 4-CP wastewater treatment. The changed extracellular polymeric substances (EPS) were related with microbial communities.

Microbial community structure and function in aerobic granular sludge

Aerobic granular sludge (AGS), a self-immobilized microbial consortium containing different functional microorganisms, is receiving growing attention, since it has shown great technological and economical potentials in the field of wastewater treatment. Microbial community is crucial for the formation, stability, and pollutant removal efficiency of aerobic granules. This mini-review systematically summarizes the recent findings of the microbial community structure and function of AGS and discusses the new research progress in the microbial community dynamics during the granulation process and spatial distribution patterns of the microbiota in AGS. The presented information may be helpful for the in-depth theoretical study and practical application of AGS technology in the future.