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Two-dimensional ZnII coordination polymer based on 5-iodoisophthalate: synthesis, crystal and electronic structure. Russ Chem Bull 2023. [DOI: 10.1007/s11172-023-3722-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
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Zherebtsov DA, Sharutin VV, Polozov MA, Naifert SA, Radzhakumar K, Adonin SA, Osipov AA, Lutsenko AI. 2,4,6-TRIIODIDE-3-AMINOBENZOATE NICKEL COMPLEXES: SYNTHESIS, STRUCTURE AND NONCOVALENT INTERACTIONS IN THE SOLID STATE. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622110154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Korobeynikov NA, Usoltsev AN, Abramov PA, Novikov AS, Sokolov MN, Adonin SA. Bromine-rich tin(IV) halide complexes: Experimental and theoretical examination of Br···Br noncovalent interactions in crystalline state. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115912] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Long-Range Supramolecular Synthon Isomerism: Insight from a Case Study of Vinylic Tellurium Trihalides Cl(Ph)C=C(Ph)TeX3 (X = Cl, I). CHEMISTRY 2022. [DOI: 10.3390/chemistry4010017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
A slight modification of the synthetic procedure resulted in a new (Cc) polymorph of vinylic tellurium-trichloride Z-Cl(Ph)C=C(Ph)TeCl3 (1, β-form) which is stabilized by Te⋯Cl chalcogen bonds, assembling its molecules into the zigzag chains. Such a packing motive is in contrast to the known (Pca21) polymorph of Z-Cl(Ph)C=C(Ph)TeCl3 (1, α-form, CCDC refcode: BESHOW), which is built upon Te⋯π(Ph) chalcogen bonded chains. We noted a similar case of [Te⋯halogen] vs. [Te⋯π(Ph)] supramolecular synthon polymorphism in its triiodide congener Z-Cl(Ph)C=CPh(TeI3) (2, α and β-polymorphic forms). Quantum chemical calculations of the intermolecular interaction and lattice energies for 1α–β and 2α–β supported the assumption that α is thermodynamic while β is a kinetic form. Kinetic forms 1β and 2β are isostructural (Cc), while the thermodynamic forms 1α (Pca21) and 2α (P21/c) are not and feature an unusual example of long-range supramolecular synthon module isomerism. In other words, 1α–2α pairs demonstrate very similarly to isostructural Te⋯πPh ChB stabilized chains, which are further packed differently relative to each other, following different angular geometry of type-I Cl⋯Cl and type-II I⋯I halogen bonding. These structural considerations are backed by quantum chemical calculations that support the proposed hierarchy of primary and secondary supramolecular synthons and the assignment of α and β as thermodynamic and kinetic forms, respectively.
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Zaguzin AS, Sukhikh TS, Sakhapov IF, Fedin VP, Sokolov MN, Adonin SA. Zn(II) and Co(II) 3D Coordination Polymers Based on 2-Iodoterephtalic Acid and 1,2-bis(4-pyridyl)ethane: Structures and Sorption Properties. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27041305. [PMID: 35209092 PMCID: PMC8876937 DOI: 10.3390/molecules27041305] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 02/04/2022] [Accepted: 02/06/2022] [Indexed: 11/28/2022]
Abstract
Metal-organic frameworks [M2(2-I-bdc)2bpe] (M = Zn(II) (1), Co(II) (2), 2-I-bdc = 2-iodoterephtalic acid, and bpe = 1,2-bis(4-pyridyl)ethane) were prepared and characterized by X-ray diffractometry. Both compounds retain their 3D structure after the removal of guest DMF molecules. Selectivity of sorption of different organic substrates from the gas phase was investigated for both complexes.
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Affiliation(s)
- Alexander S. Zaguzin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Taisiya S. Sukhikh
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Ilyas F. Sakhapov
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Arbuzov Institute of Organic and Physical Chemistry, RAS, Arbuzov St. 8, 420088 Kazan, Russia
| | - Vladimir P. Fedin
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
| | - Sergey A. Adonin
- South Ural State University, Lenina St. 76, 454080 Chelyabinsk, Russia; (A.S.Z.); (I.F.S.)
- Nikolaev Institute of Inorganic Chemistry, SB RAS, Lavrentieva St. 3, 630090 Novosibirsk, Russia; (T.S.S.); (V.P.F.); (M.N.S.)
- Correspondence:
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Usol’tsev AN, Korobeinikov NA, Sokolov MN, Adonin SA. Synthesis and Crystal Structures of Polyhalide Salts of Copper(I) Complexes [Cu(CH3CN)4]Br5 and [Cu(CH3CN)4]I5. RUSS J INORG CHEM+ 2021. [DOI: 10.1134/s003602362110020x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Ivanov DM, Bokach NA, Yu Kukushkin V, Frontera A. Metal Centers as Nucleophiles: Oxymoron of Halogen Bond-Involving Crystal Engineering. Chemistry 2021; 28:e202103173. [PMID: 34623005 PMCID: PMC9298210 DOI: 10.1002/chem.202103173] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Indexed: 02/06/2023]
Abstract
This review highlights recent studies discovering unconventional halogen bonding (HaB) that involves positively charged metal centers. These centers provide their filled d‐orbitals for HaB, and thus behave as nucleophilic components toward the noncovalent interaction. This role of some electron‐rich transition metal centers can be considered an oxymoron in the sense that the metal is, in most cases, formally cationic; consequently, its electron donor function is unexpected. The importance of Ha⋅⋅⋅d‐[M] (Ha=halogen; M is Group 9 (Rh, Ir), 10 (Ni, Pd, Pt), or 11 (Cu, Au)) interactions in crystal engineering is emphasized by showing remarkable examples (reported and uncovered by our processing of the Cambridge Structural Database), where this Ha⋅⋅⋅d‐[M] directional interaction guides the formation of solid supramolecular assemblies of different dimensionalities.
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Affiliation(s)
- Daniil M Ivanov
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, Saint Petersburg, 199034, Russian Federation
| | - Nadezhda A Bokach
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, Saint Petersburg, 199034, Russian Federation
| | - Vadim Yu Kukushkin
- Institute of Chemistry, Saint Petersburg State University, Universitetskaya Nab. 7/9, Saint Petersburg, 199034, Russian Federation.,Institute of Chemistry and Pharmaceutical Technologies, Altai State University, Barnaul, 656049, Russian Federation
| | - Antonio Frontera
- Department of Chemistry, Universitat de les Illes Balears, Palma de Mallorca (Baleares), 07122, Spain
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Torubaev YV, Skabitsky IV, Raghuvanshi A. The structural landscape of ferrocenyl polychalcogenides. J Organomet Chem 2021. [DOI: 10.1016/j.jorganchem.2021.122006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Bondarenko MA, Novikov AS, Korolkov IV, Sokolov MN, Adonin SA. Cu(II) 2-iodobenzoates: precursor-dependent formation of paddlewheel-like [Cu2(OOCR)4L2] or [Cu2L4(OOCR)2Cl2] binuclear complexes. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120436] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Adonin SA. CRYSTAL STRUCTURES OF BINUCLEAR CHLOROBISMUTHATE COMPLEXES WITH 3-METHYLPYRIDINIUM AND 4-IODOPYRIDINIUM CATIONS. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621080126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Bondarenko MA, A Adonin S. CRYSTAL STRUCTURES OF MIXED-LIGAND BINUCLEAR Zn(II) 2-IODOBENZOATE COMPLEXES WITH 4-ETHYL- AND 3-CHLOROPYRIDINE. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621080114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Bondarenko MA, Novikov AS, Chernova KV, Sokolov MN, Adonin SA. 2-METHYLPYRIDINIUM SALT OF PENTAIODOBENZOIC ACID: ROLE OF THE HALOGEN BOND IN THE FORMATION OF A CRYSTAL PACKING. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621080096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Crystals at a Carrefour on the Way through the Phase Space: A Middle Path. Molecules 2021; 26:molecules26061583. [PMID: 33805629 PMCID: PMC7998266 DOI: 10.3390/molecules26061583] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 03/08/2021] [Accepted: 03/09/2021] [Indexed: 11/30/2022] Open
Abstract
Multiple supramolecular functionalities of cyclic α-alkoxy tellurium-trihalides (including Te---O, Te---X (X = Br, I) and Te---π(C=C) supramolecular synthons) afford rich crystal packing possibilities, which consequently results in polymorphism or Z’ > 1 crystal structures. Example of three crystal forms of cyclohexyl-ethoxy-tellurium-trihalides, one of which combines the packing of two others, affords a unique model to observe the supramolecular synthon evolution at the early stages of crystallization, when crystals on the way find themself at a carrefour between the evolutionally close routes, but fail to choose between two energetically close packing patterns, so taking the “middle path”, which incorporates both of them (and results in two crystallographically independent molecules). In general, this allows a better understanding of the existing structures, and an instrument to search for the new polymorphic forms.
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Karnoukhova VA, Baranov VV, Vologzhanina AV, Kravchenko AN, Fedyanin IV. Self-organization of 1,6-dialkyl-3a,6a-diphenylglycolurils in the crystalline state. CrystEngComm 2021. [DOI: 10.1039/d1ce00434d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Glycolurils with hydrophobic substituents readily form solids with low-energy surfaces and hydrophobic properties.
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Affiliation(s)
- Valentina A. Karnoukhova
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Vladimir V. Baranov
- N. D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Anna V. Vologzhanina
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
| | - Angelina N. Kravchenko
- N. D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
- Plekhanov Russian University of Economics
| | - Ivan V. Fedyanin
- A. N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- 119991 Moscow
- Russian Federation
- Plekhanov Russian University of Economics
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