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McClymont H, Lambert SB, Barr I, Vardoulakis S, Bambrick H, Hu W. Internet-based Surveillance Systems and Infectious Diseases Prediction: An Updated Review of the Last 10 Years and Lessons from the COVID-19 Pandemic. J Epidemiol Glob Health 2024; 14:645-657. [PMID: 39141074 PMCID: PMC11442909 DOI: 10.1007/s44197-024-00272-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Accepted: 06/26/2024] [Indexed: 08/15/2024] Open
Abstract
The last decade has seen major advances and growth in internet-based surveillance for infectious diseases through advanced computational capacity, growing adoption of smart devices, increased availability of Artificial Intelligence (AI), alongside environmental pressures including climate and land use change contributing to increased threat and spread of pandemics and emerging infectious diseases. With the increasing burden of infectious diseases and the COVID-19 pandemic, the need for developing novel technologies and integrating internet-based data approaches to improving infectious disease surveillance is greater than ever. In this systematic review, we searched the scientific literature for research on internet-based or digital surveillance for influenza, dengue fever and COVID-19 from 2013 to 2023. We have provided an overview of recent internet-based surveillance research for emerging infectious diseases (EID), describing changes in the digital landscape, with recommendations for future research directed at public health policymakers, healthcare providers, and government health departments to enhance traditional surveillance for detecting, monitoring, reporting, and responding to influenza, dengue, and COVID-19.
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Affiliation(s)
- Hannah McClymont
- Ecosystem Change and Population Health (ECAPH) Research Group, School of Public Health and Social Work, Queensland University of Technology (QUT), Brisbane, Australia
| | - Stephen B Lambert
- Communicable Diseases Branch, Queensland Health, Brisbane, Australia
- National Centre for Immunisation Research and Surveillance, Sydney Children's Hospitals Network, Westmead, Australia
| | - Ian Barr
- WHO Collaborating Centre for Reference and Research on Influenza, The Peter Doherty Institute for Infection and Immunity, Melbourne, Australia
- Department of Microbiology and Immunology, University of Melbourne, Melbourne, Australia
| | - Sotiris Vardoulakis
- Health Research Institute, University of Canberra, Canberra, Australia
- Healthy Environments and Lives (HEAL) National Research Network, Canberra, Australia
| | - Hilary Bambrick
- National Centre for Epidemiology and Population Health, College of Health and Medicine, The Australian National University, Canberra, Australia
| | - Wenbiao Hu
- Ecosystem Change and Population Health (ECAPH) Research Group, School of Public Health and Social Work, Queensland University of Technology (QUT), Brisbane, Australia.
- Healthy Environments and Lives (HEAL) National Research Network, Canberra, Australia.
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Lu C, Wang L, Barr I, Lambert S, Mengersen K, Yang W, Li Z, Si X, McClymont H, Haque S, Gan T, Vardoulakis S, Bambrick H, Hu W. Developing a Research Network of Early Warning Systems for Infectious Diseases Transmission Between China and Australia. China CDC Wkly 2024; 6:740-753. [PMID: 39114314 PMCID: PMC11301605 DOI: 10.46234/ccdcw2024.166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 06/18/2024] [Indexed: 08/10/2024] Open
Abstract
This article offers a thorough review of current early warning systems (EWS) and advocates for establishing a unified research network for EWS in infectious diseases between China and Australia. We propose that future research should focus on improving infectious disease surveillance by integrating data from both countries to enhance predictive models and intervention strategies. The article highlights the need for standardized data formats and terminologies, improved surveillance capabilities, and the development of robust spatiotemporal predictive models. It concludes by examining the potential benefits and challenges of this collaborative approach and its implications for global infectious disease surveillance. This is particularly relevant to the ongoing project, early warning systems for Infectious Diseases between China and Australia (NetEWAC), which aims to use seasonal influenza as a case study to analyze influenza trends, peak activities, and potential inter-hemispheric transmission patterns. The project seeks to integrate data from both hemispheres to improve outbreak predictions and develop a spatiotemporal predictive modeling system for seasonal influenza transmission based on socio-environmental factors.
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Affiliation(s)
- Cynthia Lu
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
| | - Liping Wang
- Division of Infectious Disease, National Key Laboratory of Intelligent Tracking and Forcasting for Infectious Diseases, Chinese Centre for Disease Control and Prevention, Beijing, China
| | - Ian Barr
- WHO Collaborating Centre for Reference and Research on Influenza, VIDRL, Doherty Institute, Melbourne, Australia
- Department of Microbiology and Immunology, University of Melbourne, Victoria, Australia
| | - Stephen Lambert
- Communicable Disease Branch, Queensland Health, Brisbane, Queensland, Australia
- National Centre for Immunisation Research and Surveillance, Sydney Children’s Hospitals Network, Westmead, NSW, Australia
| | - Kerrie Mengersen
- School of Mathematical Sciences, Faculty of Science, Queensland University of Technology, Brisbane, Queensland, Australia
| | - Weizhong Yang
- School of Population Medicine & Public Health, Chinese Academy of Medical Science/Peking Union Medical College, Beijing, China
| | - Zhongjie Li
- School of Population Medicine & Public Health, Chinese Academy of Medical Science/Peking Union Medical College, Beijing, China
| | - Xiaohan Si
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
| | - Hannah McClymont
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
| | - Shovanur Haque
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
| | - Ting Gan
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
| | - Sotiris Vardoulakis
- HEAL Global Research Centre, Health Research Institute, University of Canberra, Australian Capital Territory, Australia
| | - Hilary Bambrick
- National Centre for Epidemiology and Population Health, College of Health and Medicine, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Wenbiao Hu
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, Australia
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Si X, Wang L, Mengersen K, Hu W. Epidemiological features of seasonal influenza transmission among 11 climate zones in Chinese Mainland. Infect Dis Poverty 2024; 13:4. [PMID: 38200542 PMCID: PMC10777546 DOI: 10.1186/s40249-024-01173-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 01/02/2024] [Indexed: 01/12/2024] Open
Abstract
BACKGROUND Previous studies provided some evidence of meteorological factors influence seasonal influenza transmission patterns varying across regions and latitudes. However, research on seasonal influenza activities based on climate zones are still in lack. This study aims to utilize the ecological-based Köppen Geiger climate zones classification system to compare the spatial and temporal epidemiological characteristics of seasonal influenza in Chinese Mainland and assess the feasibility of developing an early warning system. METHODS Weekly influenza cases number from 2014 to 2019 at the county and city level were sourced from China National Notifiable Infectious Disease Report Information System. Epidemic temporal indices, time series seasonality decomposition, spatial modelling theories including Moran's I and local indicators of spatial association were applied to identify the spatial and temporal patterns of influenza transmission. RESULTS All climate zones had peaks in Winter-Spring season. Arid, desert, cold (BWk) showed up the first peak. Only Tropical, savannah (Aw) and Temperate, dry winter with hot summer (Cwa) zones had unique summer peak. Temperate, no dry season and hot summer (Cfa) zone had highest average incidence rate (IR) at 1.047/100,000. The Global Moran's I showed that average IR had significant clustered trend (z = 53.69, P < 0.001), with local Moran's I identified high-high cluster in Cfa and Cwa. IR differed among three age groups between climate zones (0-14 years old: F = 26.80, P < 0.001; 15-64 years old: F = 25.04, P < 0.001; Above 65 years old: F = 5.27, P < 0.001). Age group 0-14 years had highest average IR in Cwa and Cfa (IR = 6.23 and 6.21) with unique dual peaks in winter and spring season showed by seasonality decomposition. CONCLUSIONS Seasonal influenza exhibited distinct spatial and temporal patterns in different climate zones. Seasonal influenza primarily emerged in BWk, subsequently in Cfa and Cwa. Cfa, Cwa and BSk pose high risk for seasonal influenza epidemics. The research finds will provide scientific evidence for developing seasonal influenza early warning system based on climate zones.
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Affiliation(s)
- Xiaohan Si
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, QLD, 4059, Australia
| | - Liping Wang
- Information Center, Chinese Center for Disease Control and Prevention, Beijing, 102206, China
| | - Kerrie Mengersen
- School of Mathematical Sciences, Queensland University of Technology, Brisbane, QLD, 4000, Australia
| | - Wenbiao Hu
- Ecosystem Change and Population Health Research Group, School of Public Health and Social Work, Queensland University of Technology, Brisbane, QLD, 4059, Australia.
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Ostherr K. The future of translational medical humanities: bridging the data/narrative divide. MEDICAL HUMANITIES 2023; 49:529-536. [PMID: 38114273 PMCID: PMC10803967 DOI: 10.1136/medhum-2023-012627] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 11/06/2023] [Indexed: 12/21/2023]
Abstract
This essay argues that emerging forms of translational work in the field of medical humanities offer valuable methods for engaging with communities outside of academic settings. The first section of the essay provides a synthetic overview of definitions and critical engagements with the concept of 'translation' in the context of medical humanities, a field that, in the wake of the COVID pandemic, can serve as an exemplar for other fields of the humanities. The second section explains the 'data/narrative' divide in medicine and health to demonstrate the need for new translational methodologies that can address this nexus of concern, particularly in collaboration with constituencies outside of academic settings. The third section maps out the sites and infrastructures where digital medical humanities is poised to make significant translational interventions. The final section of the essay considers data privacy and health ecology as conceptual frameworks that are necessary for bridging the data/narrative divide. Examples are drawn from the 'Translational Humanities for Public Health' website, which aggregates projects worldwide to demonstrate these emerging methodologies.
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Affiliation(s)
- Kirsten Ostherr
- Medical Humanities Research Institute, Rice University, Houston, TX 77005, USA
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Xu R, Yu P, Liu Y, Chen G, Yang Z, Zhang Y, Wu Y, Beggs PJ, Zhang Y, Boocock J, Ji F, Hanigan I, Jay O, Bi P, Vargas N, Leder K, Green D, Quail K, Huxley R, Jalaludin B, Hu W, Dennekamp M, Vardoulakis S, Bone A, Abrahams J, Johnston FH, Broome R, Capon T, Li S, Guo Y. Climate change, environmental extremes, and human health in Australia: challenges, adaptation strategies, and policy gaps. THE LANCET REGIONAL HEALTH. WESTERN PACIFIC 2023; 40:100936. [PMID: 38116505 PMCID: PMC10730315 DOI: 10.1016/j.lanwpc.2023.100936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 09/18/2023] [Accepted: 09/27/2023] [Indexed: 12/21/2023]
Abstract
Climate change presents a major public health concern in Australia, marked by unprecedented wildfires, heatwaves, floods, droughts, and the spread of climate-sensitive infectious diseases. Despite these challenges, Australia's response to the climate crisis has been inadequate and subject to change by politics, public sentiment, and global developments. This study illustrates the spatiotemporal patterns of selected climate-related environmental extremes (heatwaves, wildfires, floods, and droughts) across Australia during the past two decades, and summarizes climate adaptation measures and actions that have been taken by the national, state/territory, and local governments. Our findings reveal significant impacts of climate-related environmental extremes on the health and well-being of Australians. While governments have implemented various adaptation strategies, these plans must be further developed to yield concrete actions. Moreover, Indigenous Australians should not be left out in these adaptation efforts. A collaborative, comprehensive approach involving all levels of government is urgently needed to prevent, mitigate, and adapt to the health impacts of climate change.
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Affiliation(s)
- Rongbin Xu
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Pei Yu
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Yanming Liu
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Gongbo Chen
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Zhengyu Yang
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Yiwen Zhang
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Yao Wu
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Paul J. Beggs
- Faculty of Science and Engineering, School of Natural Sciences, Macquarie University, Sydney, NSW 2109, Australia
| | - Ying Zhang
- Sydney School of Public Health, The University of Sydney, Sydney, NSW 2006, Australia
| | - Jennifer Boocock
- Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS 7005, Australia
| | - Fei Ji
- NSW Department of Planning and Environment, Sydney, NSW 2150, Australia
| | - Ivan Hanigan
- WHO Collaborating Centre for Climate Change and Health Impact Assessment, School of Population Health, Curtin University, Perth, WA 6102, Australia
| | - Ollie Jay
- Heat and Health Research Incubator, Faculty of Medicine and Health, University of Sydney, Sydney, NSW 2006, Australia
| | - Peng Bi
- School of Public Health, The University of Adelaide, Adelaide, SA 5005, Australia
| | - Nicole Vargas
- Heat and Health Research Incubator, Faculty of Medicine and Health, University of Sydney, Sydney, NSW 2006, Australia
- School of Medicine and Psychology, College of Health & Medicine, The Australian National University, Canberra, ACT 2601, Australia
| | - Karin Leder
- School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Donna Green
- School of Biological, Earth & Environmental Sciences, The University of New South Wales, Sydney, NSW 2052, Australia
| | - Katie Quail
- School of Biological, Earth & Environmental Sciences, The University of New South Wales, Sydney, NSW 2052, Australia
| | - Rachel Huxley
- Faculty of Health, Deakin University, Melbourne, VIC 3125, Australia
| | - Bin Jalaludin
- School of Population Health, The University of New South Wales, Sydney, NSW 2052, Australia
| | - Wenbiao Hu
- School of Public Health & Social Work, Queensland University of Technology, Brisbane, QLD 4000, Australia
| | - Martine Dennekamp
- Environment Protection Authority Victoria, Melbourne, VIC 3053, Australia
| | - Sotiris Vardoulakis
- Healthy Environments And Lives (HEAL) National Research Network, College of Health and Medicine, The Australian National University, Canberra, ACT 2601, Australia
| | - Angie Bone
- Monash Sustainable Development Institute, Monash University, Melbourne, VIC 3800, Australia
| | - Jonathan Abrahams
- Monash University Disaster Resilience Initiative, Melbourne, VIC 3800, Australia
| | - Fay H. Johnston
- Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS 7005, Australia
| | - Richard Broome
- The New South Wales Ministry of Health, Sydney, NSW 2065, Australia
| | - Tony Capon
- Monash Sustainable Development Institute, Monash University, Melbourne, VIC 3800, Australia
| | - Shanshan Li
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
| | - Yuming Guo
- Climate, Air Quality Research Unit, School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC 3004, Australia
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McClymont H, Si X, Hu W. Using weather factors and google data to predict COVID-19 transmission in Melbourne, Australia: A time-series predictive model. Heliyon 2023; 9:e13782. [PMID: 36845036 PMCID: PMC9941072 DOI: 10.1016/j.heliyon.2023.e13782] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Revised: 02/09/2023] [Accepted: 02/10/2023] [Indexed: 02/23/2023] Open
Abstract
Background Forecast models have been essential in understanding COVID-19 transmission and guiding public health responses throughout the pandemic. This study aims to assess the effect of weather variability and Google data on COVID-19 transmission and develop multivariable time series AutoRegressive Integrated Moving Average (ARIMA) models for improving traditional predictive modelling for informing public health policy. Methods COVID-19 case notifications, meteorological factors and Google data were collected over the B.1.617.2 (Delta) outbreak in Melbourne, Australia from August to November 2021. Timeseries cross-correlation (TSCC) was used to evaluate the temporal correlation between weather factors, Google search trends, Google Mobility data and COVID-19 transmission. Multivariable time series ARIMA models were fitted to forecast COVID-19 incidence and Effective Reproductive Number (R eff ) in the Greater Melbourne region. Five models were fitted to compare and validate predictive models using moving three-day ahead forecasts to test the predictive accuracy for both COVID-19 incidence and R eff over the Melbourne Delta outbreak. Results Case-only ARIMA model resulted in an R squared (R2) value of 0.942, Root Mean Square Error (RMSE) of 141.59, and Mean Absolute Percentage Error (MAPE) of 23.19. The model including transit station mobility (TSM) and maximum temperature (Tmax) had greater predictive accuracy with R2 0.948, RMSE 137.57, and MAPE 21.26. Conclusion Multivariable ARIMA modelling for COVID-19 cases and R eff was useful for predicting epidemic growth, with higher predictive accuracy for models including TSM and Tmax. These results suggest that TSM and Tmax would be useful for further exploration for developing weather-informed early warning models for future COVID-19 outbreaks with potential application for the inclusion of weather and Google data with disease surveillance in developing effective early warning systems for informing public health policy and epidemic response.
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Hamdana AH, Mohsin H, Habib Tharwani Z, Masood W, Furqana AQ, Sohail A, Durdana AR, Ashraf MT, Uddin N, Islam Z, Essar MY, Marzo RR, Habib Z. Monkeypox Virus and Other Emerging Outbreaks: An Overview and Future Perspective. INQUIRY : A JOURNAL OF MEDICAL CARE ORGANIZATION, PROVISION AND FINANCING 2023; 60:469580231175437. [PMID: 37190997 PMCID: PMC10192795 DOI: 10.1177/00469580231175437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 04/20/2023] [Accepted: 04/25/2023] [Indexed: 05/17/2023]
Abstract
Monkeypox (MPX) is a zoonotic disease caused by the MPX virus from the poxviridae family of orthopoxviruses. Typically, endemic in central and west Africa, it has now become a matter of concern since cases have been reported in non-endemic countries around mid-June 2022, especially in the European region, with the transmission not related to travel. The diagnosis is made by PCR testing of the skin lesions. Even though treatment is symptomatic, antiretrovirals, such as tecovirimat, are used in severe cases. Vaccination with second and third generation vaccines is approved for prophylaxis in high risk individuals. Unfortunately, these options of treatment and prevention are only available in high income countries at the moment. This review, through a thorough literature search of articles from 2017 onward, focuses on epidemiology, clinical manifestations, challenges, treatment, prevention and control of MPX virus and how they can be corelated with other viral outbreaks including COVID-19, Acute Hepatitis of unknown origin, Measles and Dengue, to better predict and therefore prevent its transmission. The previous COVID-19 pandemic increased the disease burden on healthcare infrastructure of low-middle income countries, therefore, this recent MPX outbreak calls for a joint effort from healthcare authorities, political figures, and NGOs to combat the disease and prevent its further spread not only in high income but also in middle- and low-income countries.
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Affiliation(s)
| | - Habiba Mohsin
- Dow University of Health Sciences,
Karachi, Pakistan
| | | | | | | | - Affan Sohail
- Dow University of Health Sciences,
Karachi, Pakistan
| | | | | | - Naseer Uddin
- Dow University of Health Sciences,
Karachi, Pakistan
| | - Zarmina Islam
- Dow University of Health Sciences,
Karachi, Pakistan
| | - Mohammad Yasir Essar
- Afghanistan National Charity
Organization for Special Diseases, Kabul, Afghanistan
- Kabul University of Medical Sciences,
Kabul, Afghanistan
| | - Roy Rillera Marzo
- Department of Community Medicine,
International Medical School, Management and Science University, Malaysia
- Global Public Health, Jeffrey Cheah
School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway,
Malaysia
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Vardoulakis S, Matthews V, Bailie RS, Hu W, Salvador‐Carulla L, Barratt AL, Chu C. Building resilience to Australian flood disasters in the face of climate change. Med J Aust 2022; 217:342-345. [PMID: 35717626 PMCID: PMC9795877 DOI: 10.5694/mja2.51595] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 04/23/2022] [Accepted: 05/04/2022] [Indexed: 12/30/2022]
Affiliation(s)
- Sotiris Vardoulakis
- National Centre for Epidemiology and Population HealthAustralian National UniversityCanberraACT,Healthy Environments And Lives (HEAL) National Research NetworkAustralia
| | - Veronica Matthews
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,University Centre for Rural Health, University of SydneyLismoreNSW
| | - Ross S Bailie
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,University of SydneySydneyNSW
| | - Wenbiao Hu
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,Queensland University of TechnologyBrisbaneQLD
| | - Luis Salvador‐Carulla
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,Health Research InstituteUniversity of CanberraCanberraACT
| | - Alexandra L Barratt
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,University of SydneySydneyNSW
| | - Cordia Chu
- Healthy Environments And Lives (HEAL) National Research NetworkAustralia,Centre for Environment and Population HealthGriffith UniversityBrisbaneQLD
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