Biochemical acclimation, stomatal limitation and precipitation patterns underlie decreases in photosynthetic stimulation of soybean (Glycine max) at elevated [CO₂] and temperatures under fully open air field conditions

Cover crop inclusion and residue retention improves soybean production and physiology in drought conditions

Soybean (Glycine max (L.) Merr.) planting has increased in central and western North Dakota despite frequent drought occurrences that limit productivity. Soybean plants need high photosynthetic and transpiration rates to be productive, but they also need high water use efficiency when water is limited. Crop residues and cover crops in crop rotations may improve soybean drought tolerance in northern Great Plains. We aimed to examine how a management practice that included cover crops and residue retention impacts agronomic, ecosystem water and carbon dioxide flux, and canopy-scale physiological attributes of soybeans in the northern Great Plains under drought conditions. The experiment consisted of two soybean fields over two years with business-as-usual (no-cover crops and spring wheat residue removal) and aspirational management (cover crops and spring wheat residue retention) during a drought year. We compared yield; aboveground biomass; green chromatic coordinates, and CO2 and H2O fluxes from eddy covariance, Phenocam images, and ancillary micrometeorological measurements. These measurements were used to derive ecosystem-scale physical, and physiological attributes with the 'big leaf' framework to diagnose underlying processes. Soybean yields were 29 % higher under drought conditions in the field managed in a system that included cover crops and residue retention. This yield increase was associated with a 5 day increase in the green-chromatic-coordinate defined maturity phenophase, increasing agronomic and intrinsic water use efficiency by 27 % and 33 %, respectively, increasing water uptake, and increasing the rubisco-limited photosynthetic capacity (Vcmax25) by 42 %. The inclusion of cover crops and residue retention into a cropping system improved soybean productivity because of differences in water use, phenology timing, and photosynthetic capacity. These results suggest that farmers can improve soybean productivity and yield stability by incorporating cover crops and residue retention into their management suite because these practices to facilitate more aggressive water uptake.

Short- and long-term warming events on photosynthetic physiology, growth, and yields of field grown crops

Global temperatures are rising from increasing concentrations of greenhouse gases in the atmosphere associated with anthropogenic activities. Global warming includes a warmer shift in mean temperatures as well as increases in the probability of extreme heating events, termed heat waves. Despite the ability of plants to cope with temporal variations in temperature, global warming is increasingly presenting challenges to agroecosystems. The impact of warming on crop species has direct consequences on food security, therefore understanding impacts and opportunities to adapt crops to global warming necessitates experimentation that allows for modification of growth environments to represent global warming scenarios. Published studies addressing crop responses to warming are extensive, however, in-field studies where growth temperature is manipulated to mimic global warming are limited. Here, we provide an overview of in-field heating techniques employed to understand crop responses to warmer growth environments. We then focus on key results associated with season-long warming, as expected with rising global mean temperatures, and with heat waves, as a consequence of increasing temperature variability and rising global mean temperatures. We then discuss the role of rising temperatures on atmospheric water vapor pressure deficit and potential implications for crop photosynthesis and productivity. Finally, we review strategies by which crop photosynthetic processes might be optimized to adapt crops to the increasing temperatures and frequencies of heat waves. Key findings from this review are that higher temperatures consistently reduce photosynthesis and yields of crops even as atmospheric carbon dioxide increases, yet potential strategies to minimize losses from high-temperature exist.

Predicting biochemical acclimation of leaf photosynthesis in soybean under in-field canopy warming using hyperspectral reflectance

Traditional gas exchange measurements are cumbersome, which makes it difficult to capture variation in biochemical parameters, namely the maximum rate of carboxylation measured at a reference temperature (Vcmax25 ) and the maximum electron transport at a reference temperature (Jmax25 ), in response to growth temperature over time from days to weeks. Hyperspectral reflectance provides reliable measures of Vcmax25 and Jmax25 ; however, the capability of this method to capture biochemical acclimations of the two parameters to high growth temperature over time has not been demonstrated. In this study, Vcmax25 and Jmax25 were measured over multiple growth stages during two growing seasons for field-grown soybeans using both gas exchange techniques and leaf spectral reflectance under ambient and four elevated canopy temperature treatments (ambient+1.5, +3, +4.5, and +6°C). Spectral vegetation indices and machine learning methods were used to build predictive models for Vcmax25 and Jmax25 , based on the leaf reflectance. Results showed that these models yielded an R2 of 0.57-0.65 and 0.48-0.58 for Vcmax25 and Jmax25 , respectively. Hyperspectral reflectance captured biochemical acclimation of leaf photosynthesis to high temperature in the field, improving spatial and temporal resolution in the ability to assess the impact of future warming on crop productivity.

Genotypic variation in the response of soybean to elevated CO2

The impact of elevated CO₂ (eCO₂) on soybean productivity is essential to the global food supply because it is the world's leading source of vegetable proteins. This study aimed to understand the yield responses and nutritional impact under free-air CO₂ enrichment (FACE) conditions of soybean genotypes. Here we report that grain yield increased by 46.9% and no reduction in harvest index was observed among soybean genotypes. Elevated CO₂ improved the photosynthetic carbon assimilation rate, leaf area, plant height, and aboveground biomass at vegetative and pod filling stages. Besides the positive effects on yield parameters, eCO₂ differentially affected the overall grain quality. The levels of calcium (Ca), phosphorous (P), potassium (K), magnesium (Mg), manganese (Mn), iron (Fe), boron (B), and zinc (Zn) grain minerals decreased by 22.9, 9.0, 4.9, 10.1, 21.3, 28.1, 18.5, and 25.9% under eCO₂ conditions, respectively. Soluble sugars and starch increased by 9.1 and 16.0%, respectively, phytic acid accumulation increased by 8.1%, but grain protein content significantly decreased by 5.6% across soybean genotypes. Furthermore, the antioxidant activity decreased by 36.9%, but the total phenolic content was not affected by eCO₂ conditions. Genotypes, such as Winsconsin Black, Primorskaja, and L-117, were considered the most responsive to eCO₂ in terms of yield enhancement and less affected in the nutritional quality. Our results confirm the existence of genetic variability in soybean responses to eCO₂, and differences between genotypes in yield improvement and decreased sensitivity to eCO₂ in terms of grain quality loss could be included in future soybean selection to enable adaptation to climate change.

Impact of water stress under ambient and elevated carbon dioxide across three temperature regimes on soybean canopy gas exchange and productivity

The present study investigated the interactive effects of three environmental stress factors elevated CO₂, temperature, and drought stress on soybean growth and yield. Experiments were conducted in the sunlit, controlled environment Soil–Plant–Atmosphere–Research chambers under two-level of irrigation (WW-well water and WS-water stress-35%WW) and CO₂ (aCO_2-ambient 400 µmol mol⁻¹ and eCO₂-elevated 800 µmol mol⁻¹) and each at the three day/night temperature regimes of 24/18 °C (MLT-moderately low), 28/22 °C (OT-optimum), and 32/26 °C (MHT-moderately high). Results showed the greatest negative impact of WS on plant traits such as canopy photosynthesis (P_Cnet), total dry weight (TDwt), and seed yield. The decreases in these traits under WS ranged between 40 and 70% averaged across temperature regimes with a greater detrimental impact in plants grown under aCO₂ than eCO₂. The MHT had an increased P_Cnet, TDwt, and seed yield primarily under eCO_2, with a greater increase under WW than WS conditions. The eCO₂ stimulated P_Cnet, TDwt, and seed yield more under WS than WW. For instance, on average across T regimes, eCO₂ stimulated around 25% and 90% dry mass under WW and WS, respectively, relative to aCO₂. Overall, eCO₂ appears to benefit soybean productivity, at least partially, under WS and the moderately warmer temperature of this study.

Effects of Elevated Carbon Dioxide and Chronic Warming on Nitrogen (N)-Uptake Rate, -Assimilation, and -Concentration of Wheat

The concentration of nitrogen (N) in vegetative tissues is largely dependent on the balance among growth, root N uptake, and N assimilation. Elevated CO₂ (eCO₂) plus warming is likely to affect the vegetative-tissue N and protein concentration of wheat by altering N metabolism, but this is poorly understood. To investigate this, spring wheat (Triticum aestivum) was grown for three weeks at two levels of CO₂ (400 or 700 ppm) and two temperature regimes (26/21 or 31/26 °C, day/night). Plant dry mass, plant %N, protein concentrations, NO₃⁻ and NH₄⁺ root uptake rates (using ¹⁵NO₃ or ¹⁵NH₄), and whole-plant N- and NO₃^--assimilation were measured. Plant growth, %N, protein concentration, and root N-uptake rate were each significantly affected only by CO₂, while N- and NO₃⁻-assimilation were significantly affected only by temperature. However, plants grown at eCO₂ plus warming had the lowest concentrations of N and protein. These results suggest that one strategy breeding programs can implement to minimize the negative effects of eCO₂ and warming on wheat tissue N would be to target the maintenance of root N uptake rate at eCO₂ and N assimilation at higher growth temperatures.

Soybean photosynthetic and biomass responses to carbon dioxide concentrations ranging from pre-industrial to the distant future

Increasing atmospheric carbon dioxide concentration ([CO2]) directly impacts C3 plant photosynthesis and productivity, and the rate at which [CO2] is increasing is greater than initially predicted by worst-case scenario climate models. Thus, it is increasingly important to assess the physiological responses of C3 plants, especially those that serve as important crops, to [CO2] beyond the mid-range levels used in traditional experiments. Here, we grew the C3 crop soybean (Glycine max) at eight different [CO2] levels spanning subambient (340 ppm) to the highest level thought plausible (~2000 ppm) in chambers for 5 weeks. Physiological development was delayed and plant height and total leaf area increased at [CO2] levels higher than ambient conditions, with very little difference in these parameters among the elevated [CO2] treatments >900 ppm. Daily photosynthesis initially increased with rising [CO2] but began to level off at ~1000 ppm CO2. Similar results occurred in biomass accumulation. Thus, as [CO2] continues to match or exceed the worst-case emission scenarios, these results indicate that carbon gain, growth, and potentially yield increases will diminish, thereby ultimately constraining the positive impact that continuing increases in atmospheric [CO2] could have on crop productivity and global terrestrial carbon sinks.

Impacts of CO2 elevation on the physiology and seed quality of soybean

Understanding the responses of crops to elevated atmospheric carbon dioxide concentrations (E[CO₂]) is very important in terms of global food supplies. The present study investigates the effects of CO₂ enrichment (to 800 μmol mol^-1) on the physiology of soybean plants and the nutritional value of their seeds under growth chamber conditions. The photosynthesis of soybean was significantly promoted by E[CO₂] at all growth stages, but leaf area and specific leaf weight were not affected. The levels of mineral elements in the leaves decreased under E[CO₂]. The soil properties after soybean cultivation under E[CO₂] were not affected, except for a decrease in available potassium. Moreover, the levels of soluble sugars in the seeds were not affected by E[CO₂], but the levels of natural antioxidants decreased. In addition, the level of oleic acid decreased under E[CO₂]. However, levels of fatty acid peroxidation and saturation were maintained. In conclusion, E[CO₂] appears to have positive effects on the growth of cultivated soybean plants, but its influence on the nutritional values of soybean seeds is complex.

Yield response of field-grown soybean exposed to heat waves under current and elevated [CO2 ]

Elevated atmospheric CO2 concentration ([CO2 ]) generally enhances C3 plant productivity, whereas acute heat stress, which occurs during heat waves, generally elicits the opposite response. However, little is known about the interaction of these two variables, especially during key reproductive phases in important temperate food crops, such as soybean (Glycine max). Here, we grew soybean under elevated [CO2 ] and imposed high- (+9°C) and low- (+5°C) intensity heat waves during key temperature-sensitive reproductive stages (R1, flowering; R5, pod-filling) to determine how elevated [CO2 ] will interact with heat waves to influence soybean yield. High-intensity heat waves, which resulted in canopy temperatures that exceeded optimal growth temperatures for soybean, reduced yield compared to ambient conditions even under elevated [CO2 ]. This was largely due to heat stress on reproductive processes, especially during R5. Low-intensity heat waves did not affect yields when applied during R1 but increased yields when applied during R5 likely due to relatively lower canopy temperatures and higher soil moisture, which uncoupled the negative effects of heating on cellular- and leaf-level processes from plant-level carbon assimilation. Modeling soybean yields based on carbon assimilation alone underestimated yield loss with high-intensity heat waves and overestimated yield loss with low-intensity heat waves, thus supporting the influence of direct heat stress on reproductive processes in determining yield. These results have implications for rain-fed cropping systems and point toward a climatic tipping point for soybean yield when future heat waves exceed optimum temperature.

Novel transcriptional responses to heat revealed by turning up the heat at night

KEY MESSAGE

The circadian clock controls many molecular activities, impacting experimental interpretation. We quantify the genome-wide effects of time-of-day on the heat-shock response and the effects of "diurnal bias" in stress experiments. Heat stress has significant adverse effects on plant productivity worldwide. Most experiments examining heat stress are performed during daytime hours, generating a 'diurnal bias' in the pathways and regulatory mechanisms identified. Such bias may confound downstream interpretations and limit our understanding of the full response to heat stress. Here we show that the transcriptional and physiological responses to a sudden heat shock in Arabidopsis are profoundly sensitive to the time of day. We observe that plant tolerance and acclimation to heat shock vary throughout the day and are maximal at dusk. Consistently, over 75% of heat-responsive transcripts show a time of day-dependent response, including many previously characterized heat-response genes. This temporal sensitivity implies a complex interaction between time and temperature where daily variations in basal transcription influence thermotolerance. When we examined these transcriptional responses, we uncovered novel night-response genes and cis-regulatory elements, underpinning new aspects of heat stress responses not previously appreciated. Exploiting this temporal variation can be applied to most environmental responses to understand the underlying network wiring. Therefore, we propose that using time as a perturbagen is an approach that will enhance our understanding of plant regulatory networks and responses to environmental stresses.

Isolated and combined effects of elevated CO2 and high temperature on the whole-plant biomass and the chemical composition of soybean seeds

Soybean plants of the variety 'MG/BR Conquista' were grown in open top chambers, simulating elevated CO2 concentration ([CO2]) and high temperature under the following treatments: 1) ambient [CO2] and ambient temperature (Amb); 2) elevated [CO2] (eCO2) and ambient temperature (Elev); 3) ambient [CO2] and high temperature (Amb/Temp); 4) elevated CO2 and high temperature (Elev/Temp). The aim was to evaluate responses to elevated [CO2] and high temperature, with focus on plant development and seed yield, and composition. Elev stimulated grain yield and Amb/Temp had opposite effect. Several biochemical parameters were affected by Amb/Temp, most of them reversed by simultaneous application of Elev. The oil obtained with Elev/Temp had lower degree of unsaturation. A network of relationships among biochemical parameters of grains at three developmental stages revealed that Amb/Temp and Elev/Temp affect significantly both carbohydrate and lipid metabolisms. No significant difference was obtained comparing networks corresponding to Amb and Elev/Temp.

Crops, Nitrogen, Water: Are Legumes Friend, Foe, or Misunderstood Ally?

Biological nitrogen fixation (BNF) by crop legumes reduces demand for industrial nitrogen fixation (INF). Nonetheless, rates of BNF in agriculture remain low, with strong negative feedback to BNF from reactive soil nitrogen (N) and drought. We show that breeding for yield has resulted in strong relationships between photosynthesis and leaf N in non-leguminous crops, whereas grain legumes show strong relations between leaf N and water use efficiency (WUE). We contrast these understandings with other studies that draw attention to the water costs of grain legume crops, and their potential for polluting the biosphere with N. We propose that breeding grain legumes for reduced stomatal conductance can increase WUE without compromising production or BNF. Legume crops remain a better bet than relying on INF.

Sensitivity and requirement of improvements of four soybean crop simulation models for climate change studies in Southern Brazil

Crop growth models have many uncertainties that affect the yield response to climate change. Based on that, the aim of this study was to evaluate the sensitivity of crop models to systematic changes in climate for simulating soybean attainable yield in Southern Brazil. Four crop models were used to simulate yields: AQUACROP, MONICA, DSSAT, and APSIM, as well as their ensemble. The simulations were performed considering changes of air temperature (0, + 1.5, + 3.0, + 4.5, and + 6.0 °C), [CO2] (380, 480, 580, 680, and 780 ppm), rainfall (- 30, - 15, 0, + 15, and + 30%), and solar radiation (- 15, 0, + 15), applied to daily values. The baseline climate was from 1961 to 2014, totalizing 53 crop seasons. The crop models simulated a reduction of attainable yield with temperature increase, reaching 2000 kg ha-1 for the ensemble at + 6 °C, mainly due to shorter crop cycle. For rainfall, the yield had a higher rate of reduction when it was diminished than when rainfall was increased. The crop models increased yield variability when solar radiation was changed from - 15 to + 15%, whereas [CO2] rise resulted in yield gains, following an asymptotic response, with a mean increase of 31% from 380 to 680 ppm. The models used require further attention to improvements in optimal and maximum cardinal temperature for development rate; runoff, water infiltration, deep drainage, and dynamic of root growth; photosynthesis parameters related to soil water availability; and energy balance of soil-plant system to define leaf temperature under elevated CO2.

Elevated CO2 and temperature increase soil C losses from a soybean-maize ecosystem

Warming temperatures and increasing CO2 are likely to have large effects on the amount of carbon stored in soil, but predictions of these effects are poorly constrained. We elevated temperature (canopy: +2.8 °C; soil growing season: +1.8 °C; soil fallow: +2.3 °C) for 3 years within the 9th-11th years of an elevated CO2 (+200 ppm) experiment on a maize-soybean agroecosystem, measured respiration by roots and soil microbes, and then used a process-based ecosystem model (DayCent) to simulate the decadal effects of warming and CO2 enrichment on soil C. Both heating and elevated CO2 increased respiration from soil microbes by ~20%, but heating reduced respiration from roots and rhizosphere by ~25%. The effects were additive, with no heat × CO2 interactions. Particulate organic matter and total soil C declined over time in all treatments and were lower in elevated CO2 plots than in ambient plots, but did not differ between heat treatments. We speculate that these declines indicate a priming effect, with increased C inputs under elevated CO2 fueling a loss of old soil carbon. Model simulations of heated plots agreed with our observations and predicted loss of ~15% of soil organic C after 100 years of heating, but simulations of elevated CO2 failed to predict the observed C losses and instead predicted a ~4% gain in soil organic C under any heating conditions. Despite model uncertainty, our empirical results suggest that combined, elevated CO2 and temperature will lead to long-term declines in the amount of carbon stored in agricultural soils.

Soybean grown under elevated CO2 benefits more under low temperature than high temperature stress: Varying response of photosynthetic limitations, leaf metabolites, growth, and seed yield

To evaluate the combined effect of temperature and CO2 on photosynthetic processes, leaf metabolites and growth, soybean was grown under a controlled environment at low (22/18°C, LT), optimum (28/24°C, OT) and high (36/32°C HT) temperatures under ambient (400μmolmol-1; aCO2) or elevated (800μmolmol-1; eCO2) CO2 concentrations during the reproductive stage. In general, the rate of photosynthesis (A), stomatal (gs) and mesophyll (gm) conductance, quantum yield of photosystem II, rates of maximum carboxylation (VCmax), and electron transport (J) increased with temperature across CO2 levels. However, compared with OT, the percentage increases in these parameters at HT were lower than the observed decline at LT. The photosynthetic limitation at LT and OT was primarily caused by photo-biochemical processes (49-58%, Lb) followed by stomatal (27-32%, Ls) and mesophyll (15-19%, Lm) limitations. However, at HT, it was primarily caused by Ls (41%) followed by Lb (33%) and Lm (26%). The dominance of Lb at LT and OT was associated with the accumulation of non-structural carbohydrates (e.g., starch) and several organic acids, whereas this accumulation did not occur at HT, indicating increased metabolic activities. Compared with OT, biomass and seed yield declined more at HT than at LT. The eCO2 treatment compensated for the temperature-stress effects on biomass but only partially compensated for the effects on seed yield, especially at HT. Photosynthetic downregulation at eCO2 was possibly due to the accumulation of non-structural carbohydrates and the decrease in gs and Astd (standard A measured at 400μmolmol-1 sub-stomatal CO2 concentration), as well as the lack of CO2 effect on gm, VCmax, and J, and photosynthetic limitation. Thus, the photosynthetic limitation was temperature-dependent and was primarily influenced by the alteration in photo-biochemical processes and metabolic activities. Despite the inconsistent response of photosynthesis (or biomass accumulation) and seed yield, eCO2 tended to fully or partially compensate for the adverse effect of the respective LT and HT stresses under well-watered and sufficient nutrient conditions.

Intensifying drought eliminates the expected benefits of elevated carbon dioxide for soybean

Stimulation of C3 crop yield by rising concentrations of atmospheric carbon dioxide ([CO2]) is widely expected to counteract crop losses that are due to greater drought this century. But these expectations come from sparse field trials that have been biased towards mesic growth conditions. This eight-year study used precipitation manipulation and year-to-year variation in weather conditions at a unique open-air field facility to show that the stimulation of soybean yield by elevated [CO2] diminished to zero as drought intensified. Contrary to the prevalent expectation in the literature, rising [CO2] did not counteract the effect of strong drought on photosynthesis and yield because elevated [CO2] interacted with drought to modify stomatal function and canopy energy balance. This new insight from field experimentation under hot and dry conditions, which will become increasingly prevalent in the coming decades, highlights the likelihood of negative impacts from interacting global change factors on a key global commodity crop in its primary region of production.

Quantitative RT-PCR Platform to Measure Transcript Levels of C and N Metabolism-Related Genes in Durum Wheat: Transcript Profiles in Elevated [CO2] and High Temperature at Different Levels of N Supply

Only limited public transcriptomics resources are available for durum wheat and its responses to environmental changes. We developed a quantitative reverse transcription-PCR (qRT-PCR) platform for analysing the expression of primary C and N metabolism genes in durum wheat in leaves (125 genes) and roots (38 genes), based on available bread wheat genes and the identification of orthologs of known genes in other species. We also assessed the expression stability of seven reference genes for qRT-PCR under varying environments. We therefore present a functional qRT-PCR platform for gene expression analysis in durum wheat, and suggest using the ADP-ribosylation factor as a reference gene for qRT-PCR normalization. We investigated the effects of elevated [CO(2)] and temperature at two levels of N supply on C and N metabolism by combining gene expression analysis, using our qRT-PCR platform, with biochemical and physiological parameters in durum wheat grown in field chambers. Elevated CO(2) down-regulated the photosynthetic capacity and led to the loss of N compounds, including Rubisco; this effect was exacerbated at low N. Mechanistically, the reduction in photosynthesis and N levels could be associated with a decreased transcription of the genes involved in photosynthesis and N assimilation. High temperatures increased stomatal conductance, and thus did not inhibit photosynthesis, even though Rubisco protein and activity, soluble protein, leaf N, and gene expression for C fixation and N assimilation were down-regulated. Under a future scenario of climate change, the extent to which C fixation capacity and N assimilation are down-regulated will depend upon the N supply.

Heat waves imposed during early pod development in soybean (Glycine max) cause significant yield loss despite a rapid recovery from oxidative stress

Heat waves already have a large impact on crops and are predicted to become more intense and more frequent in the future. In this study, heat waves were imposed on soybean using infrared heating technology in a fully open-air field experiment. Five separate heat waves were applied to field-grown soybean (Glycine max) in central Illinois, three in 2010 and two in 2011. Thirty years of historical weather data from Illinois were analyzed to determine the length and intensity of a regionally realistic heat wave resulting in experimental heat wave treatments during which day and night canopy temperatures were elevated 6 °C above ambient for 3 days. Heat waves were applied during early or late reproductive stages to determine whether and when heat waves had an impact on carbon metabolism and seed yield. By the third day of each heat wave, net photosynthesis (A), specific leaf weight (SLW), and leaf total nonstructural carbohydrate concentration (TNC) were decreased, while leaf oxidative stress was increased. However, A, SLW, TNC, and measures of oxidative stress were no different than the control ca. 12 h after the heat waves ended, indicating rapid physiological recovery from the high-temperature stress. That end of season seed yield was reduced (~10%) only when heat waves were applied during early pod developmental stages indicates the yield loss had more to do with direct impacts of the heat waves on reproductive process than on photosynthesis. Soybean was unable to mitigate yield loss after heat waves given during late reproductive stages. This study shows that short high-temperature stress events that reduce photosynthesis and increase oxidative stress resulted in significant losses to soybean production in the Midwest, U.S. The study also suggests that to mitigate heat wave-induced yield loss, soybean needs improved reproductive and photosynthetic tolerance to high but increasingly common temperatures.