The impact of Great Cormorants on biogenic pollution of land ecosystems: Stable isotope signatures in small mammals

Shrews Under-Represented in Fruit Farms and Homesteads

Shrews are a less studied group of small mammals than rodents. Between 2018 and 2022, we surveyed 23 sites in Lithuania, including natural and anthropogenic habitats, with the aim to assess the proportion of Soricidae in small mammal communities and their diet based on stable isotope analysis. The average representation of Soricidae was 3.1%, about half the long-term average in other habitats in the country. The highest proportions were in meadows and farmsteads, at 4.9% and 5.0% respectively. Shrews were not trapped on farms or in young orchards, and their relative abundance was very low in intensively managed orchards (0.006 individuals per 100 trap days). Neomys fodiens and N. anomalus were unexpectedly found in homesteads, including in outbuildings. Sorex araneus and S. minutus had similar diets. The trophic carbon/nitrogen discrimination factor between invertebrates and shrew hair was 2.74‱/3.98‱ for S. araneus, 1.90‱/3.78‱ for S. minutus in the orchards. The diet of N. fodiens and N. anomalus at the homesteads requires further investigation. We propose that the under-abundance of shrews may be due to contamination by plant protection products and a lack of invertebrates under intensive agricultural practices.

The influence of seabirds on their breeding, roosting and nesting grounds: A systematic review and meta-analysis

Seabird species world-wide are integral to both marine and terrestrial environments, connecting the two systems by transporting vast quantities of marine-derived nutrients and pollutants to terrestrial breeding, roosting and nesting grounds via the deposition of guano and other allochthonous inputs (e.g. eggs, feathers). We conducted a systematic review and meta-analysis and provide insight into what types of nutrients and pollutants seabirds are transporting, the influence these subsidies are having on recipient environments, with a particular focus on soil, and what may happen if seabird populations decline. The addition of guano to colony soils increased nutrient levels compared to control soils for all seabirds studied, with cascading positive effects observed across a range of habitats. Deposited guano sometimes led to negative impacts, such as guanotrophication, or guano-induced eutrophication, which was often observed where there was an excess of guano or in areas with high seabird densities. While the literature describing nutrients transported by seabirds is extensive, literature regarding pollutant transfer is comparatively limited, with a focus on toxic and bioaccumulative metals. Research on persistent organic pollutants and plastics transported by seabirds is likely to increase in coming years. Studies were limited geographically, with hotspots of research activity in a few locations, but data were lacking from large regions around the world. Studies were also limited to seabird species listed as Least Concern on the IUCN Red List. As seabird populations are impacted by multiple threats and steep declines have been observed for many species world-wide, gaps in the literature are particularly concerning. The loss of seabirds will impact nutrient cycling at localized levels and potentially on a global scale as well, yet it is unknown what may truly happen to areas that rely on seabirds if these populations disappear.

Isotopic Niche of Syntopic Granivores in Commercial Orchards and Meadows

Simple Summary

Granivorous murids, namely striped field (Apodemus agrarius), yellow-necked (Apodemus flavicollis), and harvest (Micromys minutus) mice, occur in a variety of habitats and live syntopically in agricultural areas. Agroecosystems may be quite complex isotopically with δ¹⁵N values being influenced by many internal and external fluxes. Using isotopic (δ¹⁵N and δ¹³C) compositions from hair samples, we analysed isotopic niches of granivores in apple and plum orchards, raspberry and currant plantations, and nearby meadows in Lithuania. As the main hypothesis, we expected differences in the isotopic niches of these species (being a proxy for their diet), minimising interspecific competition. Striped field and yellow-necked mice were trapped in every habitat. Therefore, syntopic co-occurrence of granivores depended on the presence of harvest mice in the apple orchards, raspberry plantations, and meadows that served as control habitats. All species were fully separated according to δ¹⁵N values, presuming different amounts of food of animal origin in their diet. The separation of species according to δ¹³C was not expressed in all habitats. The core dietary niches of these species were fully separated in the apple orchards and raspberry plantations. Intraspecific differences of the isotopic niche were not present in any of the three species: that is, resources were equally used by males and females, adults, subadults, and juveniles.

Abstract

In agricultural habitats, diets and trophic positions of syntopic granivorous small mammals are not known sufficiently. Agroecosystems may be quite complex isotopically and the most complex situation concerns the nitrogen-15 isotope as δ¹⁵N values are influenced by many internal and external fluxes. We analysed the isotopic niches of striped field (Apodemus agrarius), yellow-necked (Apodemus flavicollis), and harvest (Micromys minutus) mice living sympatrically and syntopically in apple and plum orchards, raspberry and currant plantations, and nearby meadows that were used as control habitats. Carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotope ratios from hair samples were used as a proxy for their diet. As the main hypothesis, we expected differences in the isotopic niches of these three species, minimising interspecific competition. All species were fully separated according to δ¹⁵N values, presuming different amounts of food of animal origin in their diet. The separation of species according to δ¹³C was not expressed in all habitats. The core dietary niches of these species were fully separated in the apple orchards and raspberry plantations. Intraspecific differences of the isotopic niche were not present in any of the three species: that is, resources were equally used by males and females, adults, subadults, and juveniles.

Stable Isotopes Reveal the Dominant Species to Have the Widest Trophic Niche of Three Syntopic Microtus Voles

Simple Summary

Diets and the trophic positions of animals are fundamental issues in their ecology. We analysed the isotopic niches (as a proxy for trophic niches) of common (Microtus arvalis), field (M. agrestis), and root (M. oeconomus) voles co-occurring in orchards, berry plantations, and nearby meadows using isotopic (δ¹⁵N and δ¹³C) compositions from hair samples. We tested if the niche of the dominant common vole was widest, whether its width was related to the presence of other Microtus species, and whether there were intraspecific differences in average δ¹³C and δ¹⁵N stable isotope values. The obtained results showed relative stability in the trophic niche across the vegetative period. The isotopic niche of the common vole was the widest, exceeding the other two Microtus species by 1.6–3 times. Co-occurring vole species were separated according to δ¹³C (i.e., used different plants as main food), but they maintained similarity according to δ¹⁵N distribution. The effect of animal age and gender on the width of the trophic niche was strongest in root vole, which is a species that has spread across the country in the last 70 years. These results give new insights into the trophic ecology small herbivores, showing the impact of species co-occurrence.

Abstract

Diets and trophic positions of co-occurring animals are fundamental issues in their ecology, and these issues in syntopic rodents have been studied insufficiently. Using carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotope ratios from hair samples, we analysed the trophic niches of common (Microtus arvalis), field (M. agrestis), and root (M. oeconomus) voles co-occurring in orchards, berry plantations, and nearby meadows (as control habitat to orchards and plantations). We tested if the niche of the dominant common vole was the widest, whether its width depended on the presence of other vole species, and whether there were intraspecific differences. Results suggest stability in the trophic niches of all three Microtus species, as season explained only 2% of the variance. The widest trophic niche was a characteristic of the dominant common vole, the range of δ¹³C values exceeding the other two species by 1.6, the range of δ¹⁵N values exceeding the other two species by 1.9, and the total area of niche exceeding that of the other voles by 2.3–3 times. In the meadows and apple orchards, co-occurring vole species were separated according to δ¹³C (highest values in the dominant common vole), but they maintained similar δ¹⁵N values. Results give new insights into the trophic ecology small herbivores, showing the impact of species co-occurrence.

Seasonal and daily activity patterns of mammals in the colony of great cormorants

Despite extreme changes of ecosystems made by breeding colonies of great cormorants (Phalacrocorax carbo), these territories are still used by mammals. We present results of the analysis of mammal seasonal and daily activity patterns, registered by camera traps in two colonies of the great cormorants in Lithuania. Red foxes and raccoon dogs mainly visited colonies in the cormorant breeding time, April to July. In the inland colony of great cormorants in Lukštas Lake, average red fox relative shooting frequency in cormorant breeding time considerably exceeded that in non-breeding time (on average, 41.8 and 5.9 photos/100 days respectively). In the peninsular colony of great cormorants in Juodkrantė average relative shooting frequency of red fox in the breeding time was 7.8 versus 3.4 photos/100 days in non-breeding time, relative shooting frequencies of raccoon dog were 50.0 versus 1.3 photos/100 days, respectively. Daily activity patterns of wild boar and red fox in both colonies, as well as activity patterns of raccoon dog in Lukštas were related to the activity of cormorants with various degree of significance.

Resource partitioning confirmed by isotopic signatures allows small mammals to share seasonally flooded meadows

Meadows in river deltas are characterized by a high diversity and abundance of small mammals. However, neither their spatial arrangement nor differences in their use of microhabitat can necessarily explain the dense co-occurrence of sympatric species. We investigated how several small mammal species share a seasonally flooded meadow of limited size, testing predictions (P1) that herbivore, granivore, insectivore, and omnivore species are separated in time (dominant in different years), (P2) that sympatric species undergo isotopic partitioning, and (P3) that there are intraspecific differences in diet. Stable carbon and nitrogen isotope signatures in the hair of seven synantropic shrew, vole, and mice species were used as a proxy for their diet. We found that the three most abundant species in eight of the nine years were from different diet groups. However, based on the number of species in the functional groups, the state of small mammal community was considered unfavored in five out of the nine investigation years. In years with the greatest dominance of Apodemus agrarius, the small mammal community was characterized by decreased diversity and Micromys minutus was either in low abundance or absent. In 2014 and 2016, years of low abundance or absence of M. oeconomus, M. agrestis, and M. glareolus were both recorded in high numbers. Differences in the isotopic signatures of the three most abundant small mammal species in the community were clearly expressed and core areas in the isotopic space were separated, showing their dependence on different dietary resources. Intraspecific dietary separation between young and adult animals was observed only in M. oeconomus. Thus, the high species diversity of small mammals and the formation of their community in this investigated flooded meadow are maintained by isotopic partitioning (segregation in dietary space) and by changes in their number over time (shifting dominance).

Seasonal Variation in Stable Isotope Ratios of Cow Milk in Vilnius Region, Lithuania

Various studies have shown that stable isotope analysis has the potential to verify the geographic origin of foods and drinks. However, stable isotope composition is not always constant in the environment and can even change in the same area. Dairy products are of particular interest as a group of foods that play an important role in feeding the population. The composition of milk is fundamentally dependent on the feeding of the cows, and thereby on a particular environment. To better understand the amount of variation in δ18O, δ13C, and δ15N values in the milk from the same area, we measured stable isotope ratios in cow milk water, artesian water, and precipitation (δ18O) as well as in bulk milk samples (δ13C and δ15N) collected in 2014⁻2016. Different water and food sources were available during the winter (artesian water only and dry grass) and summer (artesian water and fresh grass), and spring and autumn seasons reflected transitional periods. Oxygen stable isotope ratios in milk water were relatively lower in winter and transitional seasons and higher in summer, showing the dependence on the main water source. δ13C values reflected particular food sources. This study shows the applicability of the stable isotope ratio method in linking cow milk to specific environments and reveals the amount of variation in stable isotope ratios in the same area. These results could be valuable for other studies on geographical origin determination of dairy products.

Accumulation of chemical elements in yellow-necked mice under a colony of great cormorants

This study represents the first investigation into the accumulation of chemical elements in small mammals inhabiting the territory of a great cormorant colony. Trapping was done in the Juodkrantė great cormorant colony, one of the largest colonies in Europe. The accumulation of 20 chemical elements in the bodies (muscle and bones) of yellow-necked mice (Apodemus flavicollis) was investigated using the energy-dispersive x-ray fluorescence equipment Spectro Xepos HE. Two groups of positively inter-correlated chemical elements (Mg, Al, P, Ca and Al, S, Cl, K) were identified. The concentrations of five elements differed significantly between mice trapped in different zones of the colony with differing intensities of cormorant influence: the values of K and Cu in A. flavicollis increased in line with an increase in the influence of the cormorants, while the concentrations of Rb and Pb decreased. The concentrations of Mn differed between zones, but were not related to the intensity of bird influence. Differences in the concentration of Zn (ANOVA F = 24.38; p < 0.001), Fe (F = 4.60; p < 0.05) and Mo (F = 4.47; p < 0.05) were related to the gender factor, all concentrations being higher in females. The concentrations of Zn were age-dependent, being highest in adult individuals (21.7 ± 4.5 μg g^-1) and exceeding those in subadult (19.4 ± 3.4 μg g^-1) individuals or juveniles (16.7 ± 1.3 μg g^-1). In general, the concentrations of accumulated elements in A. flavicollis from the territory of the cormorant colony were lower than in rodents from industrially polluted sites.

Parasites in Myodes glareolus and their association with diet assessed by stable isotope analysis

Vertebrates are hosts to numerous parasites, belonging to many different taxa. These parasites differ in transmission, being through either direct contact, a faecal-oral route, ingestion of particular food items, vertical or sexual transmission, or by a vector. Assessing the impact of diet on parasitism can be difficult because analysis of faecal and stomach content are uncertain and labourious; and as with molecular methods, do not provide diet information over a longer period of time. We here explored whether the analysis of stable isotopes in hair provides insight into the impact of diet and the presence of parasites in the rodent Myodes glareolus. Twenty-one animals were examined for parasites and their hair analysed for stable isotopes (C and N). A positive correlation between δ15N and one species of intestinal parasite was observed in females. Furthermore, several ectoparasites were negatively correlated with δ15N, indicating that infections are further associated with foraging habits (size and layout of the home range, length and timing of foraging, interaction with other rodents, etc.) that set the rodents in direct contact with infected hosts. Although a limited number of animals were included, it seemed that the isotope values allowed for identification of the association between diet and parasite occurrence in this rodent. We therefore propose that this method is useful in providing further insight into host biology, feeding preferences and potential exposure to parasites species, contributing to the understanding of the complex relationship between hosts and parasites.

Stable isotope ratio method for the characterisation of the poultry house environment

Stable isotope analysis was applied to describe the poultry house environment. The poultry house indoor environment was selected for this study due to the relevant health problems in animals and their caretakers. Air quality parameters including temperature, relative humidity, airflow rate, NH₃, CO₂ and total suspended particles, as well as mean levels of total airborne bacteria and fungi count, were measured. Carbon isotope ratios (¹³C/¹²C) were obtained in size-segregated aerosol particles. The carbon (¹³C/¹²C) and nitrogen (¹⁵N/¹⁴N) isotope ratios were measured in feed, litter, scrapings from the ventilation system, feathers and eggs. Additionally, the distribution of δ¹³C and δ¹⁵N values in different tissues of the chicken was examined. The airborne bacteria and fungi extracted from the air filters collected from poultry farms were grown in the laboratory in media with known isotope values and measured for stable isotope ratios. Analysis of isotope fractionation between microorganisms and their media indicated the applicability of stable isotope analysis in bulk samples for the identification of source material. The analysed examples imply that stable isotope analysis can be used to examine the indoor environment along with its biology and ecology, and serve as an informative bioanalytical tool.