Microbial nitrogen transformations tracked by natural abundance isotope studies and microbiological methods: A review

Nitrogen is an essential nutrient in the environment that exists in multiple oxidation states in nature. Numerous microbial processes are involved in its transformation. Knowledge about very complex N cycling has been growing rapidly in recent years, with new information about associated isotope effects and about the microbes involved in particular processes. Furthermore, molecular methods that are able to detect and quantify particular processes are being developed, applied and combined with other analytical approaches, which opens up new opportunities to enhance understanding of nitrogen transformation pathways. This review presents a summary of the microbial nitrogen transformation, including the respective isotope effects of nitrogen and oxygen on different nitrogen-bearing compounds (including nitrates, nitrites, ammonia and nitrous oxide), and the microbiological characteristics of these processes. It is supplemented by an overview of molecular methods applied for detecting and quantifying the activity of particular enzymes involved in N transformation pathways. This summary should help in the planning and interpretation of complex research studies applying isotope analyses of different N compounds and combining microbiological and isotopic methods in tracking complex N cycling, and in the integration of these results in modelling approaches.

Insights into anthropogenic impact on atmospheric inorganic aerosols in the largest city of the Tibetan Plateau through multidimensional isotope analysis

Particulate inorganic nitrogen aerosols (PIN) significantly influence air pollution and pose health risks worldwide. Despite extensive observations on ammonium (pNH4+) and nitrate (pNO3-) aerosols in various regions, their key sources and mechanisms in the Tibetan Plateau remain poorly understood. To bridge this gap, this study conducted a sampling campaign in Lhasa, the Tibetan Plateau's largest city, with a focus on analyzing the multiple isotopic signatures (δ15N, ∆17O). These isotopes were integrated into a Bayesian mixing model to quantify the source contributions and oxidation pathways for pNH4+ and pNO3-. Our results showed that traffic was the largest contributor to pNH4+ (31.8 %), followed by livestock (25.4 %), waste (21.8 %), and fertilizer (21.0 %), underscoring the impact of vehicular emissions on urban NH3 levels in Lhasa. For pNO3-, coal combustion emerged as the largest contributor (27.3 %), succeeded by biomass burning (26.3 %), traffic emission (25.3 %), and soil emission (21.1 %). In addition, the ∆17O-based model indicated a dominant role of NO2 + OH (52.9 %) in pNO3- production in Lhasa, which was similar to previous observations. However, it should be noted that the NO3 + volatile organic component (VOC) contributed up to 18.5 % to pNO3- production, which was four times higher than the Tibetan Plateau's background regions. Taken together, the multidimensional isotope analysis performed in this study elucidates the pronounced influence of anthropogenic activities on PIN in the atmospheric environment of Lhasa.

Tracing the impacts of ecological water replenishment on the sources and transformation of groundwater nitrate through isotope and microbial analysis

Ecological water replenishment (EWR) changes the recharge conditions, flow fields, and physicochemical properties of regional groundwater. However, the resulting impacts on mechanisms regulating the sources and transformation of groundwater nitrate remain unclear. This study investigated how EWR influences the sources and transformation processes of groundwater nitrate using an integrated approach of Water chemistry analysis and stable isotopes (δ15N-NO3- and δ18O-NO3-) along with microbial techniques. The results showed that groundwater NO3-N decreased from 12.98 ± 7.39 mg/L to 7.04 ± 8.52 mg/L after EWR. Water chemistry and isotopic characterization suggested that groundwater nitrate mainly originated from sewage and manure. The Bayesian isotope mixing model (MixSIAR) indicated that EWR increased the average contribution of sewage and manure sources to groundwater nitrate from 46 % to 61 %, whereas that of sources of chemical fertilizer decreased from 43 % to 21 %. Microbial community analysis revealed that EWR resulted in a substantial decrease in the relative abundance of Pseudomonas spp denitrificans, from 13.7 % to 0.6 %. Both water chemistry and microbial analysis indicated that EWR weakened denitrification and enhanced nitrification in groundwater. EWR increases the contribution of nitrate to groundwater by promoting the release of sewage and feces in the unsaturated zone. However, the dilution effect caused by EWR was stronger than the contribution of sewage and fecal sources to groundwater nitrate. As a result, EWR helped to reduce groundwater nitrate concentrations. This study showed the effectiveness of integrated isotope and microbial techniques for delineating the sources and transformations of groundwater nitrate influenced by EWR.

Denitrification regulates spatiotemporal pattern of N2O emission in an interconnected urban river-lake network

Urban rivers are hotspots of N2O production and emission. Interconnected river-lake networks are constructed to improve the water quality and hydrodynamic conditions of urban rivers in many cities of China. However, the impact of the river-lake connectivity project on N2O production and emission remains unclear. This study investigated dissolved N2O and emission of the river-lake network in Wuhan City, China from March 2021 to December 2021. The results showed that river-lake connection greatly decreased riverine Nitrogen (N) concentration and increased dissolved oxygen (DO) concentration compare to traditional urban rivers. N2O emissions from the urban river interconnected with lakes (LUR: 67.3 ± 92.6 μmol/m2/d) were much lower than those from the traditional urban rivers (UR: 467.3 ± 1075.7 μmol/m2/d) and agricultural rivers (AR: 20.4 ± 15.3μmol/m2/d). Regression tree analysis suggested that the N2O concentrations were extremely high when hypoxia exists (DO < 1.6 mg/L), and TDN was the primary factor regulating N2O concentrations when hypoxia does not occur. Thus, we ascribe the low N2O emission in the LUR and AR to the lower N contents and higher DO concentrations. The microbial process of N2O production and consumption were quantitatively estimated by isotopic models. The mean proportion of denitrification derived N2O (fbD) was 63.5 %, 55.6 %, 42.3 % and 42.7 % in the UR, LUR, lakes and AR, suggested denitrification dominated N2O production in the urban rivers, but nitrification dominated N2O production in the lakes and AR. The positive correlation between logN2O and fbD suggested that denitrification is the key process to regulate the N2O production and emission. The abundance of denitrification genes (nirS and nirK) was much higher than that of nitrification genes (amoA and amoB), also evidenced that denitrification was the main N2O source. Therefore, river-lake interconnected projects changed the nutrients level and hypoxic condition, leading to the inhibition of denitrification and nitrification, and ultimately resulting in a decrease of N2O production and emission. These results advance the knowledge on the microbial processes that regulate N2O emissions in inland waters and illustrate the integrated management of water quality and N2O emission.

Uptake patterns for nitrogen and sulfur source by aquatic plants and various nitrogen acquisition strategies: Affected by mining activities

Understanding the nitrogen and sulfur uptake strategies of mine plants, including sources and preferences for nitrogen forms (ammonium nitrogen (NH4+) vs nitrate nitrogen (NO3-)), is critical to improving understanding of the role of plants in participating in the biogeochemical cycles of nitrogen and sulfur in mining areas. In this study, the stable N and S isotopic compositions of two species of aquatic plants (calamus and reed) in Linhuan mining area were analyzed to determine their absorption strategies for different nitrogen and sulfur sources. The results showed that river water was the largest source of nitrogen and sulfur, contributing 54.6% and 53.9% respectively. NO3- is the main form of nitrogen uptake by reed and calamus, followed by NH4+. In order to adapt to the change of nitrogen form in the environment, reed and calamus tend to absorb and utilize NO3- to maintain their absorption of nitrogen. Mine effluents from mining activities provide at least 12.9% and 16.8% sulfate to reed and calamus respectively, and the effect of mine effluents on reed and calamus sulfur has been underestimated. This study reveals the key factors controlling plant isotope composition, and the use of nitrogen and sulfur isotope composition of aquatic plants can help quantify the level of influence of mining activities, and understand the biogeochemical cycle of nitrogen and sulfur in mining areas.

Microbial, chemical, and isotopic monitoring integrated approach to assess potential leachate contamination of groundwater in a karstic aquifer (Apulia, Italy)

Landfill sites are subjected to long-term risks of accidental spill of leachate through the soil and consequential contamination of the groundwater. Wide areas surrounding the landfill can seriously be threatened with possible consequences to human health and the environment. Given the potential impact of different coexisting anthropic pollution sources (i.e., agriculture and cattle farming) on the same site, the perturbation of the groundwater quality may be due to multiple factors. Therefore, it is a challenging issue to correctly establish the pollution source of an aquifer where the landfill is not isolated from other anthropic land uses, especially in the case of a karstic coastal aquifer. The present study is aimed at setting in place an integrated environmental monitoring system that included microbiological, chemical, and isotope methods to evaluate potential groundwater pollution in a landfill district in the south of Italy located in Murgia karstic aquifer. Conventional (microbial plate count and physical-chemical analyses) and advanced methods (PCR-ARISA, isotope analysis of δ18O, δ2H, 3H, δ 13C, δ 15N-NO3-, and δ 18O-NO3-) were included in the study. Through data integration, it was possible to reconstruct a scenario in which agriculture and other human activities along with seawater intrusion in the karst aquifer were the main drivers of groundwater pollution at the monitored site. The microbiological, chemical, and isotope results confirmed the absence of leachate effects on groundwater quality, showing the decisive role of fertilizers as potential nitrate sources. The next goal will be to extend long-term integrated monitoring to other landfill districts, with different geological and hydrogeological characteristics and including different sources of pollution, to support the ecological restoration of landfills.

Salinity, mineralogy, porosity, and hydrodynamics as drivers of carbon burial in urban mangroves from a megacity

Mangrove ecosystems are an important blue carbon store but exhibit considerable variation in soil carbon stocks globally. Unravelling the conditions controlling carbon stock is critical for assessing current and future carbon budgets. Mangrove soil biogeochemical cycles can strongly influence carbon storage capacities. We thus investigated carbon sequestration and the environmental parameters shaping variability in biogeochemical cycling and carbon storage in sediment samples from four mangrove sites along an estuarine-to-marine gradient in Hong Kong, a megacity. Our results showed that organic matter in Hong Kong mangroves is sourced principally from autochthonous mangrove plants. Total nitrogen was higher in the freshwater-influenced sites and supplied from different sources. Marine-influenced sites had larger sulfur fractionations, reflecting higher marine-sourced sulfate concentrations and indicating a relatively open sulfate system. We estimated an average organic carbon stock of 115 ± 8 Mg C ha-1 in the upper 100 cm soil layer placing Hong Kong mangroves at the lower end of the global spectrum of the soil carbon stock. Carbon accumulation was found to be driven by a combination of higher total organic matter inputs, soil fluxes, and porosity. Notably, despite having the highest mass-specific soil organic carbon contents, Mai Po had the lowest integrated soil organic carbon storage (77 ± 3 Mg C ha-1). This was primarily due to lower sediment density and higher tidal pumping leading to a decrease in carbon retention. Total organic matter input, sediment characteristics, and hydrodynamics were the main factors influencing soil organic carbon storage. Overall, our results suggest that (1) while multiple parameters can enhance soil organic carbon content and increase carbon storage capacities, (2) hydrodynamics and sediment characteristics can increase the potential for leakage of carbon, and (3) high carbon content does not always equal high carbon sequestration and stock.

Identification of methane cycling pathways in Quaternary alluvial-lacustrine aquifers using multiple isotope and microbial indicators

Groundwater rich in dissolved methane is often overlooked in the global or regional carbon cycle. Considering the knowledge gap in understanding the biogeochemical behavior of methane in shallow aquifers, particularly those in humid alluvial-lacustrine plains with high organic carbon content, we investigated methane sources and cycling pathways in groundwater systems at the central Yangtze River basins. Composition of multiple stable isotopes (2H/18O in water, 13C in dissolved inorganic carbon, 13C/2H in methane, and 13C in carbon dioxide) was combined with the characteristics of microbes and dissolved organic matter (DOM) in the study. The results revealed significant concentrations of biogenic methane reaching up to 13.05 mg/L in anaerobic groundwater environments with abundant organic matter. Different pathways for methane cycling (methanogenic CO2-reduction and acetate-fermentation, and methane oxidation) were identified. CO2-reduction dominated acetate-fermentation in the two methanogenic pathways primarily associated with humic DOM, while methane oxidation was more closely associated with microbially derived DOM. The abundance of obligate CO2-reduction microorganisms (Methanobacterium and Methanoregula) was higher in samples with substantial CO2-reduction, as indicated by isotopic composition. The obligate acetate-fermentation microorganism (Methanosaeta) was more abundant in samples exhibiting evident acetate-fermentation. Additionally, a high abundance of Candidatus Methanoperedens was identified in samples with apparent methane oxidation. Comparing our findings with those in other areas, we found that various factors, such as groundwater temperature, DOM abundance and types, and hydrogeological conditions, may lead to differences in groundwater methane cycling. This study offered a new perspective and understanding of methane cycling in worldwide shallow alluvial-lacustrine aquifer systems without geothermal disturbance.

Geographic source of bats killed at wind-energy facilities in the eastern United States

Bats subject to high rates of fatalities at wind-energy facilities are of high conservation concern due to the long-term, cumulative effects they have, but the impact on broader bat populations can be difficult to assess. One reason is the poor understanding of the geographic source of individual fatalities and whether they constitute migrants or more local individuals. Here, we used stable hydrogen isotopes, trace elements and species distribution models to determine the most likely summer geographic origins of three different bat species (Lasiurus borealis, L. cinereus, and Lasionycteris noctivagans) killed at wind-energy facilities in Ohio and Maryland in the eastern United States. In Ohio, 41.6%, 21.3%, 2.2% of all individuals of L. borealis, L. cinereus, and L. noctivagans, respectively, had evidence of movement. In contrast, in Maryland 77.3%, 37.1%, and 27.3% of these same species were classified as migrants. Our results suggest bats killed at a given wind facility are likely derived from migratory as well as resident populations. Finally, there is variation in the proportion of migrants killed between seasons for some species and evidence of philopatry to summer roosts. Overall, these results indicate that the impact of wind-energy facilities on bat populations occurs across a large geographic extent, with the proportion of migrants impacted likely to vary across species and sites. Similar studies should be conducted across a broader geographic scale to understand the impacts on bat populations from wind-energy facilities.

Isotopic characteristics and source analysis of atmospheric ammonia during agricultural periods in the Xichuan area of the Danjiangkou Reservoir

Nitrogen deposition is an important means of exogenous nitrogen input in reservoir water. Agricultural activities around the reservoir lead to a sharp increase in the concentration of ammonia in the atmosphere, which poses a threat to the reservoir water body. Clarifying the contribution of agricultural ammonia release to atmospheric NHx (gaseous NH3 and particulate NH4+), in the reservoir area can provide a theoretical foundation for local reactive nitrogen control. We collected atmospheric NH3 and NH4+ samples during the agricultural periods and analyzed the isotopic characteristics of atmospheric NHx and the contribution rates of different ammonia sources in the Xichuan area of the Danjiangkou Reservoir. The results showed that the initial δ15N values of NH3 (-30.0‰ to -7.2‰) and particulate NH4+(-33‰ to +4.9‰ for finer and coarser particles, respectively) are different, and their contribution ratios from dissimilar ammonia sources are also different, among which NH4+ is more susceptible to meteorological factors. However, since the atmospheric NHx in the Xichuan area is mainly gaseous NH3, the final sources of atmospheric ammonia nitrogen source depend on gaseous NH3. Agricultural sources (59%-74%) were the main NH3 sources in this area. Among them, the fertilizer use emission was dominant; it had the highest contribution rate in summer during the agricultural period and a more prominent impact in areas with less human interference. Reasonable regulation of the application of high-ammonia releasing fertilizer, especially during the agricultural period in summer, is an effective way to reduce the threat of atmospheric ammonia to water health.

Nitrate budget of a terrestrial-to-marine continuum in South China: Insights from isotopes and a Markov chain Monte Carlo model

Anthropogenic nitrate (NO3-) production has been increasing and is exported to the ocean via river networks, causing eutrophication and ecological damage. While studies have focused on river NO3- pollution, what has been lacking is the quantification of the sources of NO3- in coastal rivers. This study applied the dual isotopes (δ15N/δ18O-NO3-) to quantify the sources and their fluxes of NO3- in two inflow rivers of the Qinzhou Bay. By adding our results to the NO3- source apportionment in Qinzhou Bay, we, for the first time, established the NO3- budgets of the terrestrial-to-marine continuum in both high- and low-flow seasons. We quantitatively showed the direct and indirect roles (e.g., the stimulation of nitrification by sewage ammonium-NH4+) of terrestrial sources in driving the high NO3- loading in the estuary. The results highlighted the necessity to consider coastal rivers and estuary as a whole, which could shed light on the effective reduction of NO3- pollution in coastal environments.

Tracking flowpaths in a complex karst system through tracer test and hydrogeochemical monitoring: Implications for groundwater protection (Gran Sasso, Italy)

Groundwater in karst aquifers is frequently tapped for drinking purposes, due to frequent huge volumes of resources. Unfortunately, vulnerability of these aquifers can be high, due to possible fast transfer of recharge water on springs by the karst network. On Gran Sasso Mountain regional aquifer, several springs are subjected to drinking withdrawal and an updated evaluation of their potential is now a fundamental issue to be considered, facing climate change effects, which reflect on variation of discharge regimen and values. To distinguish between different contribution of spring recharge, a tracer test has been carried out on the Vitella d'Oro spring, fed both by the regional aquifer and by a local system exposed to karst features developed in the Rigopiano Conglomerates formation. Thanks to hydrogeological, hydrogeochemical and isotopic data, a conceptual model of spring recharge has been proposed and subsequently validated by the tracer test results. All information confirms the superimposition on the regional base flow, by a relevant contribution of the karst network, influencing the spring discharge in recharge periods. In detail, a fast flow component is responsible for discharge peaks and frequently of turbidity events, having a mean velocity ranging from 30 to 70 m/h in the aquifer. Besides of this fast flow, an additional aliquot of the recharge is due to the same local aquifer, but slower flow clearly identifiable by hydrochemistry and isotopic data. Thanks to these findings, a renewed management of the spring has been suggested, considering the different degrees of aquifer vulnerability (turbidity occurrence) directly related to the discharge regimen.

Tracing sulfate sources and transformations of surface water using multiple isotopes in a mining-rural-urban agglomeration area

Rapid urbanization and mining activities are exacerbating sulfate (SO42-) pollution in surface water, and the information on its sources and transformations is crucial for understanding the sulphur cycle in mining areas. In this study, the SO42- in the surface water of Huaibei mining area were monitored and the main sources of pollution and biogeochemical processes were identified using stable isotopes (δD, δ18O-H2O, δ34S-SO42- and δ18O-SO42-) and water chemistry. The results demonstrated the SO42- content in the Huihe River and Linhuan subsidence water area (SWA) is higher than that in other rivers and SWAs, which exceeded the environmental quality standard of surface water. The SO42- content of different rivers and SWAs showed seasonal differences, and the dry season was higher than the wet season. In addition, the SO42- in Tuohe River and Suihe River is primarily caused by urban sewage and agriculture activities, while in Zhonghu and Shuoxihu SWA is mainly contributed by natural evaporate dissolution. Notably, the input of SO42- in the Huihe River and Linhuan SWA caused by mining activities cannot be disregarded. The aerobic environment and isotopic fractionation of surface water indicate that sulfide oxidation is not the major cause of SO42- formation. This work has revealed the multiple sources and transformation mechanisms of SO42-, and provided a reference for the development of comprehensive management and effective remediation strategies of SO42- contamination in surface water around mining areas.

The dominant genera of nitrogenase (nifH) affects soil biological nitrogen fixation along an elevational gradient in the Hengduan mountains

Biological nitrogen (N) fixation by diazotrophic microbes is an essential process for the N input. However, the patterns of biological N fixation and its biological or environmental mechanism along an elevational gradient in mountain ecosystems are not fully understood. In this study, a field experiment was conducted in the Hengduan Mountains to investigate the biological N fixation associated with the diversity and abundance of the nifH gene. Our results showed that both the abundance of the nifH gene and the biological N fixation displayed hump-shaped trends along an elevation gradient in the wet and dry seasons. However, the diversity of the nifH gene showed an inverse unimodal trend along an elevation gradient. We observed that biological N fixation was jointly associated with the abundance of the nifH gene, especially dominant genera, as well as soil chartacteristics. Among them, clay content played a preeminent role in the regulation of N fixation potentially through the formation of microaggregates and microenvironments. In general, our results revealed that biological N fixation was correlated with the abundance of microorganisms, especially dominant genera, and soil texture. These results highlighted the importance of dominant genera, which should be considered in the modeling and forecasting of N cycling under future environmental change.

Production of Isotopically Labeled KRAS4b

Isotopically labelled proteins are important reagents in structural biology as well as in targeted drug development. The field continues to advance with complex multi-isotope labeling. We have combined our experience in high-level soluble KRAS4b expression with protocols for isotope incorporation, to achieve reliable and efficient approaches for several labeling strategies. Typical experiments achieve nearly 100% 15N incorporation, with yields in the range of 1.3-24.6 mg/L (median = 6.4 mg/L, n = 53). Improvements in the growth parameters in the presence of deuterium reduce the standard time of fermentation from 5 days to 3 days by modifying the medium used during the weaning process. The methods described are compatible with multi-isotope labeling and site-specific labeling.

Geological and hydrochemical controls on water chemistry and stable isotopes of hot springs in the Three Parallel Rivers Region, southeast Tibetan Plateau: The genesis of geothermal waters

The Three Parallel Rivers Region (TPRR) is a tectonically active area in the middle segment of the Sanjiang Tethys Orogen, southeast Tibetan Plateau, characterized by many hot springs. This area is up-and-coming for producing geothermal energy, a CO2-free energy source, which will help China in reducing the effects of climate change. We report here the results of 37 geothermal springs that have been sampled to investigate the physical and chemical characteristics of the thermal water and evolution patterns. These springs are drained along three major N-S faults zones (the Lujiang Fault, the Lancangjiang Fault and the Jinshajiang-Red River Fault) to the interior of the Lanping Basin. Five hydrochemical water facies were recognized with Na-HCO3 being the primary type. Fluorine and boron that are produced through water-rock interactions are commonly enriched in these waters, and their concentrations are further controlled by secondary hydrochemical processes during water migration. The water's stable isotopes (δ18O and δD) suggest the meteoric origin of all thermal waters in the TPRR. The estimated reservoir temperatures range between 61 °C and 118 °C with the relatively hot reservoirs (> 100 °C) generally developed in major shear zones. These results indicate variable water circulation depth exceeding 3000 m, implying that the large-scale shearing displacement plays a vital role in heat acquisition. Conductive cooling and possible mixing of the thermal water with near-surface cold water occurred as the thermal water ascended along the fault systems and was ejected along the outlets of the springs. This study adds insights into hydrogeochemical constrains on evolution of water solutes over a large-scale hydrological cycle in the TPRR.

U-13C-glucose incorporation into source leaves of Brassica napus highlights light-dependent regulations of metabolic fluxes within central carbon metabolism

Plant central carbon metabolism comprises several important metabolic pathways acting together to support plant growth and yield establishment. Despite the emergence of 13C-based dynamic approaches, the regulation of metabolic fluxes between light and dark conditions has not yet received sufficient attention for agronomically relevant plants. Here, we investigated the impact of light/dark conditions on carbon allocation processes within central carbon metabolism of Brassica napus after U-13C-glucose incorporation into leaf discs. Leaf gas-exchanges and metabolite contents were weakly impacted by the leaf disc method and the incorporation of glucose. 13C-analysis by GC-MS showed that U-13C-glucose was converted to fructose for de novo biosynthesis of sucrose at similar rates in both light and dark conditions. However, light conditions led to a reduced commitment of glycolytic carbons towards respiratory substrates (pyruvate, alanine, malate) and TCA cycle intermediates compared to dark conditions. Analysis of 13C-enrichment at the isotopologue level and metabolic pathway isotopic tracing reconstructions identified the contribution of multiple pathways to serine biosynthesis in light and dark conditions. However, the direct contribution of the glucose-6-phosphate shunt to serine biosynthesis was not observed. Our results also provided isotopic evidences for an active metabolic connection between the TCA cycle, glycolysis and photorespiration in light conditions through a rapid reallocation of TCA cycle decarboxylations back to the TCA cycle through photorespiration and glycolysis. Altogether, these results suggest the active coordination of core metabolic pathways across multiple compartments to reorganize C-flux modes.

Multiple drivers for carbon stocks and fluxes in different types of mangroves

Mangroves are highly efficient in sequestering carbon from the atmosphere and can accumulate carbon in sediments for millennials. However, The fate of mangrove carbon has not been well constrained due to the lack of data on different pools of sediment carbon sinks and sources. This study examined the variation of carbon stocks and fluxes at the water-sediment-air interface in both estuarine mangroves (natural: Mai Po, restored: Gei Wai) and oceanic mangroves (Ting Kok). There are divergent patterns in biogeochemical variables at the sediment-water-air interface, likely due to significant variation within sites. Total sediment carbon stocks (TCs) ranked in the order of restored estuarine mangroves (392.5 ± 8.8 Mg ha-1), natural estuarine mangroves affected by aquaculture (315.2 ± 21.4 Mg ha-1) and oceanic mangroves (229.1 ± 32.3 Mg ha-1). Sediment organic carbon stocks (SOC) and inorganic carbon stocks (SIC) accounted for 84.1-90.2 % and 9.8-15.9 % of TC, respectively. The highest sediment-air CO2 and CH4 fluxes occurred in restored and natural estuarine mangroves affected by aquaculture, respectively. The isotope of CO2 fluxes (δ13C-CO2) indicates higher contributions from the degradation of mangrove-derived organic carbon in restored (-25.94 ‰ ± 3.37 ‰) and natural estuarine mangroves affected by aquaculture (-25.54 ‰ ± 0.96 ‰) than in oceanic mangroves (-21.55 ‰ ± 1.36 ‰). The isotope of CH4 fluxes (δ13C-CH4) indicates CH4 production dominated by acetate fermentation in restored estuarine mangroves but dominated by the reduction of CO2 for other sites. Future studies should better constrain the fate of mangrove carbon by considering local drivers.

Investigation of source and infiltration of toxic metals in indoor PM2.5 using Pb isotopes during a season of high pollution in an urban area

Lead (Pb) isotope ratio has been applied in source investigation for particulate matter in size < 2.5 μm. However, arsenic (As) and cadmium (Cd) are carcinogenic to human and their isotope analysis is difficult. This study investigated whether the Pb isotope ratio was a useful indicator in identifying the sources of As and Cd indoors and investigating its influencing factors. This study also calculated the infiltration factor (Finf) for metals to assess the influences of indoor- and outdoor-generated metals to indoor air. The As and Cd concentrations in indoor air were 0.87 ± 0.69 and 0.19 ± 0.15 ng/m3, respectively; the corresponding values for outdoor air were 1.44 ± 0.80 and 0.33 ± 0.19 ng/m3. The Finf of As and Cd were 0.60 ± 0.37 and 0.58 ± 0.39, and outdoor was a predominant contributor to indoor As and Cd. The Pb isotopes ratio indicated that traffic-related emission was a major contributor to Pb. The Pb concentration was associated with those of As and Cd in indoor or outdoor air, as was the 208Pb/207Pb ratio in outdoor air. Significant correlations between indoor 208Pb/207Pb values and As and Cd concentrations in indoor air were found only in study houses with air change rate > 1.5 h-1. These findings suggested that traffic-related emission was identified as a major source of As and Cr. The 208Pb/207Pb is a useful indicator in investigating the source of As and Cd; however, the air change rate influences the applicability of this approach on source identification.

The suitability of isotopic methods in identifying water sources of a shallow-rooted herbaceous plant in a desert steppe

Isotopic methodologies have gained prominence in investigating the composition of plant water sources; however, concerns regarding their suitability and reliability in diverse environments have emerged in recent years. This study presents a comparative analysis of root, soil, and liquid water (precipitation, dew, and groundwater) samples obtained from a desert steppe using isotope ratio infrared spectrometry (IRIS) and isotope ratio mass spectrometry (IRMS). The objective was to evaluate the applicability of these techniques in discerning the water sources of Stipa breviflora, a shallow-rooted herbaceous plant species. Additionally, we explored the root water uptake characteristics and water use strategy of S. breviflora. Our findings indicate that the IRIS method had more enriched values of D compared to the IRMS method across all samples, while no discernible pattern was observed for 18O. Notably, the differences observed among all samples exceeded the instruments' accuracies. Moreover, an unexpected occurrence was noted, whereby both D and 18O values in the root water were more enriched than in any of the considered water sources, rendering identification of the plant water sources unattainable. By conducting a re-analysis of more refined soil layer samples, we discovered that S. breviflora exhibits the ability to absorb and utilize water sources in close proximity to the soil surface. It further suggested that the shallow-rooted herbaceous plants in desert steppes can exploit small rainfalls, frequently overlooked in their ecological importance. Considering the distinctive soil and plant characteristics of desert steppes, we recommend adopting IRMS methods in conjunction with refined surface soil sampling for isotopic analysis aiming to identify water sources of shallow-rooted herbaceous plants. This study provides novel insights into assessing the suitability of isotopic techniques for analyzing plant water sources, while enhancing our understanding of water use strategies and environmental adaptation mechanisms employed by shallow-rooted herbaceous plants within xerophytic grassland ecosystems.

Assessing the present levels of 137Cs in the remote ecosystem of Bjornoya (South Svalbard)

The remoteness and small size of Bjornoya (S Svalbard) make the island one of the most unreachable places in the Arctic. Limited accessibility contributes to still-existing knowledge gap on isotope accumulation in compartments of its ecosystem. Therefore, in this study we aimed to investigate the current concentration of 137Cs in the terrestrial samples of vascular plants, cryptogams, and soil collected on Bjornoya in 2021. The measured average activity of 137Cs in bryophytes was 56.5 Bq kg-1, lichens 27.6 Bq kg-1, vascular plants 7.26 Bq kg-1, and soil 9.63 Bq kg-1. In the case of bryophytes, 137Cs activity was negatively correlated with δ15N. Our results suggest that bird guano was the main source of nitrogen and 137Cs for vascular plants. For bryophytes, significantly lower values of δ15N than in vascular plants suggests that this group is more sensitive to atmospheric N intake, with fallout being the main source of 137Cs.

Selenoneine Is Methylated in the Bodies of Mice and then Excreted in Urine as Se-Methylselenoneine

Oral intake of purified selenoneine and seafoods has been reported to result in selenoneine accumulation in erythrocytes in mice and human. In addition, Se-methylselenoneine was suggested to be produced as a metabolite of selenoneine in the urine and whole blood of humans. In order to confirm the molecular mechanism of production of Se-methylselenoneine, a stable isotope (Se-76) labeled selenoneine was biosynthesized using genetically modified fission yeast and administered to mice. The Se-76-labeled Se-methylselenoneine was detected in urine but Se-78 and Se-80-labeled Se-methylselenoneine arising from natural isotopes of Se was hardly detected. These results suggest that Se-methylselenoneine was a metabolite and the excreted form of selenoneine. The methylation of selenoneine in mice administered selenoneine continuously was evaluated by the analyses of organs using an online liquid chromatograph system with an inductively coupled plasma mass spectrometer (LC-ICP-MS). These experiments indicate that selenoneine is methylated in the liver and (or) kidneys.

Hydrological niche regulation induced by different resistance strategies facilitates coexistence of P. longipes and L. communis under drought stress

Under global warming, the availability of water resources is one of the most important factors affecting trait evolution and plant species distribution across terrestrial ecosystems, and the relationships between drought resistance strategies and the hydrological niche characteristics of plants are worth studying. We continuously monitored physiological drought response parameters such as gs , Tr , proline, soluble sugar, gene expression and activities of SOD, POD, and CAT to assess drought resistance strategies of Platycarya longipes and Lindera communis; determined plant soil hydrological niche separation by stable H and O isotope analysis; and analysed the effects of interspecific water competition by comparing the differences in morphological and physiological parameters between solo and mixed planting. Under drought stress, L. communis exhibited a drought avoidance strategy, and P. longipes exhibited a drought tolerance strategy. L. communis utilized the water within the shallow soil layer, while P. longipes mainly utilized the water in the deeper soil layer; there were fewer parameters with significant differences between the solo planting and the mixed planting of L. communis compared to P. longipes. Overall, P. longipes benefited from coexistence with L. communis under drought stress, which may be because L. communis employs a drought avoidance strategy, reducing soil water consumption in the drought environment. These results suggested that differences in functional traits or resistance strategies among species benefit species' coexistence in a community under drought stress.

Parts per billion of nitrite in microcrystalline cellulose by ion chromatography mass spectrometry with isotope labeled internal standard

Regulatory authorities like the U.S. Food and Drug Administration (FDA) have set strict specification levels for N-nitrosamines in finished drug products. Nitrite is a potential precursor for the formation of probable carcinogenic N-nitrosamines when secondary or tertiary amines are also present in the active pharmaceutical ingredient (API) synthesis or drug formulation process. An accurate and sensitive determination of nitrite will be useful when a drug product manufacturer chooses to investigate the reaction kinetics between nitrite and amines or to select appropriate excipients for its drug formulation. Pharmaceutical excipient manufacturers may also need an accurate nitrite measurement to investigate the nitrite content in their excipients. This study details the development and validation of an ion chromatography mass spectrometry (IC-MS) method for trace nitrite determination in microcrystalline cellulose materials, one of the important pharmaceutical excipients used in many drug formulations. MS operated under selected ion monitoring mode was used to solve the commonly encountered interference issue with conductivity detection, and nitrite isotope internal standard was employed to address the ion suppression issue with MS detection. The installation of an after-column "jumper" to flush water with an auxiliary pump through the MS when it is not used for data collection avoided sensitivity loss due to trace salt accumulation in the ion source. Validation of the optimized method was satisfactory, with linearity of nitrite in the concentration range of 0.02-7.50 ppm (µg/g) having a regression coefficient of > 0.999, precision of RSD < 9.5% at 0.03 ppm and RSD < 3.4% at 0.4 ppm and recovery of 92.0-103.0%. The limit of detection and limit of quantitation were 0.005 and 0.016 ppm, respectively.

Variation in habitat use and its consequences for mercury exposure in two Eastern Ontario bat species, Myotis lucifugus and Eptesicus fuscus

The St. Lawrence River in Eastern Ontario, Canada, has been a designated an area of concern due to past industrial contamination of sediment in some areas and transport of mercury from tributaries. Previous research using bats as sentinel species identified elevated concentrations of total mercury (THg) in fur of local bats and species-specific variation between little brown bats (Myotis lucifugus) and big brown bats (Eptesicus fuscus). Here, we investigated the mercury exposure pathways for these two species by testing the hypothesis that diet variation, particularly the reliance on aquatic over terrestrial insects, is a determinant of local bat mercury concentrations. We analyzed THg concentration and stable isotope ratios of δ15N and δ13C in fur of little and big brown bats, and in aquatic and terrestrial insects. Big brown bats, especially males, accumulated significantly higher THg concentrations in their fur compared to little brown bats. However, this difference was not related to diet because big brown bats consumed terrestrial insects, which were lower in mercury than aquatic insects, the primary prey for little brown bats. We also evaluated whether fur THg concentrations translate into molecular changes in tissues linked to (methyl)mercury toxicity by quantifying tissue changes in global DNA methylation and mitochondrial DNA abundance. No significant changes in DNA molecular markers were observed in relation to fur THg concentration, suggesting mercury exposure to local bats did not impact molecular level changes at the DNA level. Higher mercury in bats was not associated with local aquatic contamination or genotoxicity in this study area.

Unexpectedly high nitrate levels in a pristine forest river on the Southeastern Qinghai-Tibet Plateau

River nitrate (NO₃^-) pollution is a global environmental issue. Recently, high NO₃^- levels in some pristine or minimally-disturbed rivers were reported, but their drivers remain unclear. This study integrated river isotopes (δ¹⁸O/δ¹⁵N-NO₃^- and δD/¹⁸O-H₂O), ¹⁵N pairing experiments, and qPCR to reveal the processes driving the high NO₃^- levels in a nearly pristine forest river on the Qinghai-Tibet Plateau. The river isotopes suggested that, at the catchment scale, NO₃^- removal was prevalent in summer, but weak in winter. The pristine forest soils contributed more than 90 % of the riverine NO₃^-, indicating the high NO₃^- backgrounds. The release of soil NO₃^- to the river was "transport-limited" in both seasons, i.e., the NO₃^- production/stock in the soils exceeded the capacity of hydrological NO₃^- leaching. In summer, this regime and the NO₃^--plentiful conditions in the soils associated with the strong NO₃^- nitrification led to the high riverine NO₃^- levels. While the in-soil nitrification was weak in winter, the leaching of legacy NO₃^- resulted in the consistently high NO₃^- levels. This study provides insights into the reasons for high NO₃^- levels in pristine or minimally-disturbed rivers worldwide and highlights the necessity to consider NO₃^- backgrounds when evaluating anthropogenic NO₃^- pollution in rivers.

National-scale investigation of dual nitrate isotopes and chloride ion in South Korea: Nitrate source apportionment for stream water

Nitrate sources in surface water have been identified using dual-isotope compositions of nitrate with various tools to efficiently manage the water quality at the local scale. Correlation between Cl and NO₃ has also been used to identify NO₃. In this study, we assess the reliability of the dual-isotope approach and Cl in terms of nitrate source apportionment. To this end, we collected stream water samples throughout South Korea to estimate nitrate sources in streams and determine whether the land-use pattern was closely related to nitrate sources. The δ¹⁵N-NO₃ ranging from -1.3 to 14.8‰ showed a spatial distribution that was lower in mountain ranges (<7‰) than plain areas (>8‰). The Cl concentration in this national-scale distribution was also assessed. The relationship between the proportion of Cl and δ¹⁵N-NO₃ classifies nitrate sources into areas characterized by three land-use patterns: (1) agricultural and business areas, (2) forests in highlands, and (3) lowland forests, of which (1) had proportions of Cl >50%, while (2) and (3) were <50%. The samples in (3) showed δ¹⁵N-NO₃ values > 6‰, similar to those of (1). Deuterium excess of samples was negatively correlated (R² = 0.53) with δ¹⁵N-NO₃, accounting for the fact that δ¹⁵N-NO₃ reflected land-use patterns. Samples were dominantly affected by agriculture-derived sources and domestic sewage showed NO₃/Cl of <0.4 and δ¹⁵N-NO₃ of >6‰. These results suggest that nitrate source apportionment should be comprehensively evaluated considering the dual-isotope approach, land-use patterns, and Cl proportions.

Decryption analysis of antimony pollution sources in PM2.5 through a multi-source isotope mixing model based on lead isotopes

Antimony (Sb) in PM_2.5 has attracted close attention as a new air pollutant due to its extensive use in daily life. The identification of antimony sources in PM_2.5 by scientific methods is important to control its pollution. In this study, the Sb and other elements concentrations and Pb isotopic compositions in PM_2.5 and possible pollution sources (soil, road dust, traffic emission, coal-fired fly ash, local factory emission dust and cement dust) were analyzed. The results showed that the Sb in the PM_2.5 samples had seasonal change. The enrichment factors of Sb in PM_2.5 samples were all above 100 in four seasons, which indicated anthropogenic pollution. The average value of potential ecological risk index was at extremely high-risk level greater than 320. Based on Pearson correlation coefficient and hierarchical cluster analysis results, the pollution sources of antimony and lead in PM_2.5 samples were highly consistent which means that Pb isotopes might be a new and feasible tracer for Sb pollution in air. The sources analysis results based on Pb isotopes indicated that the proportion of Pb and Sb from coal-fired fly ash was the highest in winter (47.7%) and inclined to road dust in spring (34.5%), but it was mainly from traffic emissions in summer and autumn (34.2% and 32.8%). This study showed that Pb isotope tracing can be applied to predict the potential pollution sources, and it was also a feasible substitute for tracing Sb pollution in PM_2.5.

Particulate organic carbon potentially increases methane emissions from oxic water of eutrophic lakes

Lakes are hot spots for methane (CH₄) emissions and particulate organic carbon (POC) production, which describes the methane paradox phenomenon. However, the current understanding of the source of POC and its effect on CH₄ emissions during eutrophication remains unclear. In this study, 18 shallow lakes in different trophic states were selected to investigate the POC source and its contribution to CH₄ production, particularly to reveal the underlying mechanisms of the methane paradox. The carbon isotopic analysis showed that the δ¹³C_poc ranged from -30.28 ‰ to -21.14 ‰, indicating that cyanobacteria-derived carbon is an important source of POC. The overlying water was aerobic but contained high concentrations of dissolved CH₄. Particularly, in hyper-eutrophic lakes, such as Lakes Taihu, Chaohu, and Dianshan, the dissolved CH₄ concentrations were 2.11, 1.01, and 2.44 μmol/L, while the dissolved oxygen concentrations were 3.11, 2.92, and 3.17 mg/L, respectively. The intensified eutrophication increased the POC concentration, concomitantly promoting the dissolved CH₄ concentration and the CH₄ flux. These correlations revealed the role of POC in CH₄ production and emission fluxes, particularly as a possible cause of the methane paradox, which is crucial for accurately evaluating the carbon budget and balance in shallow freshwater lakes.

Coupling geochemical and microbial molecular techniques to reveal catchment-scale nitrate yield and fluvial export dynamics

The disturbance of reactive nitrogen (N) on ecosystems and biogeochemical cycles is now one of the most severe environmental problems worldwide. Nitrate (NO₃^-) is usually a dominant reactive N species in river ecosystems. Excessive NO₃^- concentrations in rivers have led to eutrophication and consequent ecological and environmental damages. Quantifying catchment-scale NO₃^- yield and export dynamics is crucial for effective remediation of river NO₃^- pollution. Frequently, natural abundance isotopes of NO₃^- in a river (δ¹⁵N/δ¹⁸O-NO₃^-) are applied to identify sources and potential transformations of NO₃^- at a catchment scale, while microbial molecular techniques and ¹⁵N pairing experiments are employed to reveal the NO₃^- production and removal processes and their underlying mechanisms in microenvironments (e.g., sediments and soils). In this study, we developed a novel protocol that couples these complementary geochemical and molecular techniques to quantify catchment-scale NO₃^- yield and fluvial export dynamics. The protocol links microscopic processes with catchment-scale geochemical characteristics to explicitly describe the NO₃^- cycling processes and their underlying abiotic and biotic mechanisms within a catchment. We applied the protocol to the Dadu and Jiazela catchments on the Qinghai-Tibet Plateau, and demonstrated the effectiveness of the protocol in determining NO₃^- yield and export dynamics in the catchments.

Anthropogenic impacts on the nitrate pollution in an urban river: Insights from a combination of natural-abundance and paired isotopes

Urban rivers are often characterized by high nitrate (NO₃^-) loadings. High NO₃^- loadings cause water quality and ecological damages, which undermines the sustainable development of cities. To date, the drivers of these high NO₃^- loadings remain unclear. This study, for the first time, integrated natural-abundance isotopes (δ¹⁵ N/δ¹⁸O-NO₃^- and δD/δ¹⁸O-H₂O) and ¹⁵N-pairing techniques to comprehensively reveal the anthropogenic impacts on the NO₃^- pollution in an urban river. Natural-abundance isotopes suggested that in both the wet and dry seasons, the NO₃^- was predominantly from the conservative mixing of different sources, and biological NO₃^- removal was minor. The ¹⁵N-pairing experiments supported the natural-abundance isotope data, quantitatively showing that in-soil nitrification was prevailing, while NO₃^- removal processes (denitrification, anammox, and dissimilatory NO₃^- reduction to ammonium) were weak. A Bayesian isotope-mixing model showed that soil sources (soil organic nitrogen and chemical fertilizer) dominated the NO₃^- in the upper reaches, while in the lower reaches, the impermeable riparian zone short-circuited the access of soils to the river. Here, the wastewater treatment plants became a significant source of NO₃^-. This study quantitatively revealed the drivers of high NO₃^- loadings in an urban river, and generated important clues for effective NO₃^- pollution control and remediation in urban rivers.

Investigation of chemical linkages between lignin and carbohydrates in cultured poplar cambium tissues via double isotope labeling

Lignin precursor labeled with ¹³C (coniferin-¹³Cα), carbohydrate precursor labeled with D (6,6-D₂-glucose) were put into cambium tissue stripped from a growing poplar. The tissue was further cultured in vitro for 18d. Then, the isotopic abundance was determined. The results showed that the labeled precursors could be normally involved in the formation of new xylem. The labeled new xylem tissue was fractionated by ionic liquid DMSO/TBAH system to obtain two components: glucan-lignin complex (GL) and xylan-lignin complex (XL). The X-ray diffraction (XRD) results indicated that the crystalline form of cellulose in the GL component was transformed from type I to type II after the ionic liquid separation. Then the GL and XL were purified and modified by enzymatic and chemical methods, and their structures were elucidated by nuclear magnetic resonance (NMR) spectroscopy. The results showed that lignin subunits in the cultured tissues were mainly connected by β-5 and β-O-4 linkages, of which the β-O-4 substructure unit predominated. Lignin and carbohydrates were mainly connected by acetal bonds, ether bonds, and ester bonds. Combined with the carbohydrate composition and XRD analysis results, the GL components also confirmed the existence of acetal bonds, ester bonds and ether bonds between lignin and cellulose.

Pollution source and chemicals structure of the water-soluble fractions in PM2.5 that induce apoptosis in China

Identify risk drivers is the key condition in air pollution control, and biological effect-directed analysis is the most commented method for combing chemical identify and human health. The water-soluble organic matter contained in PM_2.5 plays an important role in human health, while it is also the most difficult to identify its chemical information. Exploring the structural characteristics and pollution sources of its key toxic components is the optimized strategy to meet this question. In this study, the induction of apoptosis by the water-soluble fractions (WSF) of PM_2.5 samples collected in 10 major cities in China over a period of 1 year was observed in vitro in Beas-2b cells. Organic carbon structures were examined using nuclear magnetic resonance; air potential sources were identified using δ¹³C and ¹⁴C isotopic markers. Apoptosis induction by WSF in PM_2.5 was generally stronger in northern cities than in southern cities, and in winter than in summer. Organic compounds with aromatic and double-bond carbon structures from secondary products of motor vehicle exhausts, coal-derived emissions, and emissions derived from the burning of core residues may be primarily responsible for apoptosis induction by PM_2.5. Our results will contribute to understanding the toxic substances contained in WSF and provide basic data for accurate pollution control.

Nitrate removal rates, isotopic fractionation, and denitrifying bacteria in a woodchip-based permeable reactive barrier system: a long-term column experiment

This study evaluated the effectiveness of using organic carbon materials (i.e., woodchips) to remove nitrate from groundwater. The results of our flow-through column experiment, which was conducted over 1.6 years, suggested that denitrifying bacteria reduce nitrate by using it as an electron acceptor and woodchips as an electron donor. The nitrate removal rates were sufficiently high (0.39-1.04 mmol L-1 day-1) during the operation of the column. Denitrification process was supported by fractionation of nitrogen and oxygen isotopes (δ15N and δ18O), with the δ15N and δ18O values enriched from 7.4‰ and 22.3‰ to 21.2‰ and 30.4‰, respectively. Enrichment factors ([Formula: see text]) for 15 N and 18O were calculated using the Rayleigh fractionation model, with values of - 13.2‰ for ε15N and - 7.1‰ for ε18O. The fractionation ratio of 15 N to 18O was 1.9:1, confirming denitrification. The most abundant bacterial genera in the soil used for inoculation were Enterobacter (86.7%), Nitrospira (1.8%), and Arthrobacter (1.5%), while those in the column effluent were Macrococcus (37.1%), Escherichia (14.7%), and Shigella (14.6%), indicating that bacterial communities changed in response to geochemical conditions in the column. This study suggests that nitrate in groundwater can be effectively removed using woodchip-based passive treatment systems and that information on isotopic fractionation and denitrifying bacteria can be key tools to understand denitrification.

Quantitative identification of groundwater contamination sources by combining isotope tracer technique with PMF model in an arid area of northwestern China

Nowadays, groundwater quality has deteriorated because of intensive human activities. It is important to accurately identify the pollution source for controlling the deterioration of groundwater quality. However, the accuracy of the current source analysis method needs to be improved. In this study, we combined hydrochemical method, isotope tracing technique and PMF model, for the first time, to trace the source of groundwater pollution in Beichuan River basin, Qinghai Province, China. According to the results, there were 35.8% of Fe, 34.1% of total hardness, 24.3% of SO₄^2- and 8.09% of NO₃^- samples exceeded the Grade III standards for Groundwater quality in China, which indicated that the groundwater in the study area has been significantly affected by human activities. Hydrochemical method suggested that the chemical component originated from rock weathering, cation exchange and mineral dissolution. Based on isotope tracing technique (δ¹⁵N-NO₃^-, δ¹⁸O-NO₃^-, δ³⁴S-SO₄^2- and δ¹⁸O-SO₄^2-), the primary sources of nitrate and sulfate in groundwater were soil nitrogen and oxidation of sulfide minerals in the forest area, domestic sewage and oxidation of sulfide minerals in the urban and industrial area, and mixed sources in the village and agricultural area. Finally, the pollution source of groundwater was distinguished by combining the PMF model, isotope tracing technique and hydrochemical method. Results showed that the main pollutant of groundwater is domestic sewage in the urban, village and industrial area. The contribution rates to groundwater pollution were 60.7%, 60.8% and 57.8%, respectively. However, in the forest and agricultural area, the main source changed to water-rock interaction and chemical fertilizer, and the contribution rates to groundwater quality were 53.5% and 61.0%, respectively. Our results suggested that the coupling tracing methodology can improve the accuracy of source resolution in the water environment and it can be applied to other areas of the world.

Isotopic and hydrogeochemical tracking of dissolved nutrient dynamics in the Brahmaputra River System: A source delineation perspective

The Brahmaputra river system (BRS) produces the largest discharge in India, supplying water to more than 62 million inhabitants. The present study aims to quantify the environmental elements that affect the spatio-temporal variation of nutrients in the Brahmaputra river system (BRS). The association of physico-chemical characteristics of floodplain sediments with the distribution pattern of P during wet and dry periods in different depths were also studied. The seasonal variation suggest that the average dissolved inorganic nitrogen and dissolve inorganic phosphorus are found higher in monsoon while the average dissolve silica were higher in post-monsoon. The spatial variation of dissolve inorganic phosphate and nitrate concentration suggests both the nutrient are higher in upstream sites. The DiS concentrations tended to be higher in downstream. In 70% of the sampled tributaries, the average molar ratio for dissolved inorganic nitrogen/dissolved inorganic phosphorous (DIN/DIP) was greater than 16:1, which indicates phosphate limited biological productivity. In contrast, an average molar ratio of dissolved inorganic silica/DIN (DSi/DIN) of 3.8 ± 3.0 favoured diatom growth in those tributaries where DSi/DIN molar ratio was lower than 1, indicating eutrophication. The BRS transported 24.7, 5.93, and 312 × 10⁴ tons/year^-1 of DIN, PO₄-P and SiO₂-Si, respectively. The depth-wise variation of P-fraction during monsoon suggests that the authigenic phosphorus was most abundant followed by Fe-bound, exchangeable, detrital and organic. In the post-monsoon, Fe-bound P was found at a higher concentration followed by authigenic phosphorus. High nutrient concentrations with more δ¹⁸O depleted water implied precipitation being the major source of nutrients in the BRS.

Delineation of highland saline groundwater sources in Ba'kelalan region of NE Borneo to improve the salt-making production using geochemical and geophysical approaches

The extraction of mountain salt from the saline waters is the basic livelihood of the Ba'kelalan communities of Sarawak. The current integrated approach is the first attempt to study the sources and geochemical processes of the saline groundwaters in this mountain region. Hence, in this study, saline groundwater samples from five existing wells in different seasons were analysed for hydrochemical parameters and multi-isotope composition (δ¹⁸O, δD, δ³⁴S, δ¹¹B and δ³⁷Cl). The significant increase in TDS, EC and salinity was due to seasonal variation and fluctuation in water level based on hourly, daily and monthly observations. The geochemical ratios and the statistical techniques revealed that the salinity was due to the dissolution of marine evaporites as a dominant process, coupled with other factors such as water-rock interaction, ion exchange and sulphate reduction. From the isotopic signatures, it was inferred that the origin of saline groundwater was from the intense dissolution of marine evaporites such as halite dissolution and oxidation of -sulphide (pyrite). 2D electrical resistivity and seismic refraction methods were used to identify the lithological variations, depth of potential sources of saline groundwater, and the subsurface structures. It was inferred the probability of a conductive zone at a depth of 1-14 m, from which the saline groundwater plume migrates towards the perched aquifer. The presence of subsurface faults facilitated the movement of hypersaline groundwater from the saturated zone to the surface. The outcome of the study will support the dependent community to enhance their commercial salt production.

Dual isotopes of nitrite in the Amundsen Sea in summer

Nitrite (NO₂^-) is a key intermediate in the nitrogen (N) cycle, and its transformation is accomplished by microbial communities. However, due to few studies on the nitrite cycle, a clear assessment of the contribution to the marine biogeochemical cycle is missing. Here, we present data on nitrogen and oxygen isotopic composition of NO₂^- in the Amundsen Sea in summer, and explore the biogeochemical processes that influence the NO₂^- cycle. Extremely low δ¹⁵N_NO2 and abnormally high δ¹⁸O_NO2 were found in the upper waters of the Amundsen Sea, with δ¹⁵N_NO2 as low as -58.4 ‰ and δ¹⁸O_NO2 as high as 44.4 ‰. Enzymatic isotopic exchange reactions between nitrate and nitrite have been proposed to be responsible for these isotopic anomalies. The mirror-symmetrical variation between δ¹⁵N_NO2 and δ¹⁸O_NO2 suggests that the isotopic fractionation effects of nitrogen and oxygen are opposite in isotope exchange reactions. Dual isotopes of nitrite indicate that ammonia oxidation is the main source of nitrite, thus nitrification plays an important role in the formation of primary nitrite maximum in the upper Amundsen Sea. The nitrogen and oxygen isotopic compositions of nitrite provide support for clarifying multiple processes of marine nitrogen cycle.

Backgrounds as a potentially important component of riverine nitrate loads

Nitrate (NO₃^-) is a major trigger for river eutrophication. While efforts have been made to understand the anthropogenic NO₃^- pollution in rivers, the role of background NO₃^- in determining NO₃^- loads remains to be studied. In this study, we used dual-isotopes (δ¹⁵N/δ¹⁸O-NO₃^-) and an isotope-mixing model to reveal the natural and anthropogenic processes regulating the NO₃^- loads in a forest river that acts as a headwater source for the China's South to North Water Transfer Project. Even though the basin is sparsely populated, the mean NO₃^--N concentration (0.6 ± 0.2 mg/L) was much higher than the median concentration of global rivers (0.3 ± 0.2 mg/L). Meanwhile, the δ¹⁵N-NO₃^- was extremely depleted (as low as -14.4‰). The correlations between the NO₃^- concentrations and isotopes indicate that the nitrification of different sources (i.e., soil organic nitrogen, chemical fertilizer, manure, and sewage) dominates the NO₃^- loads. Soil organic nitrogen accounted for c.a. 60% of the riverine NO₃^- in the high-flow season, which alone exceeds China's national standard. This finding clearly shows that high NO₃^- loads in rivers could not all be ascribed to direct anthropogenic inputs, and background NO₃^- could be critical triggers. Therefore, when evaluating the NO₃^- pollution of rivers, the background NO₃^- concentrations must be considered along with the actual NO₃^- loads. In the low-flow season, the contribution from manure and sewage (c.a. 34%) increases. This study highlights the potentially important role of background NO₃^- in regulating riverine NO₃^- loads, providing important implications for understanding high riverine NO₃^- loads worldwide.

Feammox in alluvial-lacustrine aquifer system: Nitrogen/iron isotopic and biogeochemical evidences

Groundwater nitrogen contamination is becoming increasingly serious worldwide, and natural nitrogen attenuation processes such as anaerobic ammonium oxidation coupled to iron reduction ("Feammox") play an important role in mitigating contamination. Although there has been intensive study of Feammox in soils and sediments, still lacks research on this process in groundwater. This study makes effort to demonstrate the occurrence of Feammox in groundwater by combining information from Fe/N isotope composition, the quantitative polymerase chain reaction (qPCR) assay, and 16S rRNA gene sequencing. Poyang Lake Plain of Yangtze River in central China was selected as the case study area. The critical evidences that indicate Feammox in groundwater include favorable hydrogeochemical conditions of the alluvia-lacustrine aquifer systems, the simultaneous enrichment of ¹⁵N in ammonium and ⁵⁶Fe, the relative high abundance of Acidimicrobiaceae bacterium A6, and the joint elevation of the abundance of the Feammox bacteria and the concentration of Fe(III). Redundancy analysis (RDA) indicated that Geothrix and Rhodobacter may participate directly or cooperatively in the Feammox process. Ammonium-oxidizing archaea (AOA) involved in ammonium-oxidizing or Feammox process may be stimulated by Fe(III) under a low oxygen concentration and weakly acidic condition. Anammox may be indirectly enhanced by products of the nitrogen transformation processes involving Feammox bacteria and AOA. Fe(III) concentration is an important environmental factor affecting the abundance of functional microorganisms related to nitrogen cycling and the composition of ammonium-oxidizing and iron-reducing microbes. Specific geological background (such as the widespread red soils) and anthropogenic input of ammonium, iron, and acidic substances may jointly promote Feammox in groundwater.

Enhanced microbial nitrification-denitrification processes in a subtropical metropolitan river network

Urban rivers are hotspots of regional nitrogen (N) pollution and N transformations. Previous studies have reported that the microbial community of urban rivers was different from that of natural rivers. However, how microbial community affects N transformations in the urban rivers is still unclear. In this study, we employed N nutrients-related isotope technology (includes natural-abundance isotopes survey and isotope-labeling method) and bioinformatics methods (includes 16S rRNA high-throughput sequencing and quantitative PCR analysis) to investigate the major N transformations, microbial communities as well as functional gene abundances in a metropolitan river network. Our results suggested that the bacterial community structure in the highly urbanized rivers was characterized by higher richness, less complexity and increased abundances of nitrification and denitrifying bacterium compared to those in the suburban rivers. These differences were mainly caused by high sewage discharge and N loadings. In addition, the abundances of nitrifier gene (amoA) and denitrifier genes (nirK and nirS) were significantly higher in the highly urbanized rivers (2.36 × 10³, 7.43 × 10⁷ and 2.28 × 10⁷ copies·mL^-1) than that in the suburban rivers (0.43 × 10³, 2.18 × 10⁷ and 0.99 × 10⁷ copies·mL^-1). These changes in microbes have accelerated nitrification-denitrification processes in the highly urbanized rivers as compared to those in the suburban rivers, which was evidenced by environmental isotopes and the rates of nitrification (10.52 vs. 0.03 nmol·L^-1·h^-1) and denitrification (83.31 vs. 22.49 nmol·g^-1·h^-1). Overall, this study concluded that the excess exogenous N has significantly shaped the specific aquatic bacterial communities, which had a potential for enhancing nitrification-denitrification processes in the highly urbanized river network. This study provides a further understanding of microbial N cycling in urban river ecosystems and expands the combined application of isotopic technology and bioinformatics methods in studying biogeochemical cycling.

Trophic transfer of methylmercury and brominated flame retardants in adjacent riparian and aquatic food webs: 13C indicates biotransport of contaminants through food webs

Biomagnification of persistent toxic substances (PTSs) in food chains is of environmental concern, but studies on biotransport of PTSs across aquatic and riparian food chains are still incomplete. In this study, biomagnification of several PTSs including methylmercury (MeHg), polybrominated diphenyl ethers (PBDEs), and 1,2-bis (2,4,6-tribromophenoxy) ethane (BTBPE) was investigated in adjacent aquatic and riparian food webs. Concentrations of MeHg and PBDEs ranged from 2.37 to 353 ng/g dry weight (dw) and not detected (Nd) to 65.1 ng/g lipid weight (lw) in riparian samples, respectively, and ranged from Nd to 705 ng/g dw and Nd to 187 ng/g lw in aquatic samples, respectively. Concentrations of MeHg were significantly correlated with δ¹³C (p < 0.01) rather than δ¹⁵N (p > 0.05) values in riparian organisms, while a significant correlation was observed between concentrations of MeHg and δ¹⁵N (p < 0.01) in aquatic organisms. Biomagnification factors (BMFs) and trophic magnification factors (TMFs) of PBDE congeners were similar in riparian and aquatic food webs, while BMFs and TMFs of MeHg were much higher in aquatic food web than those in riparian food web. The results indicate the biotransport of MeHg from aquatic insects to terrestrial birds, and δ¹³C can be a promising ecological indicator for biotransport of pollutants across ecosystems.

Effect of sulfur sources on the competition between denitrification and DNRA

The fate of nitrogen is controlled by the competition between nitrate reduction pathways. Denitrification removes nitrogen in the system to the atmosphere, whereas dissimilatory nitrate reduction to ammonia (DNRA) retains nitrate in the form of ammonia. Different microbes specialize in the oxidation of different electron donors, thus electron donors might influence the outcomes of the competition. Here, we investigated the fate of nitrate with five forms of sulfur as electron donors. Chemoautotrophic nitrate reduction did not continue after the passages of the enrichments with sulfide, sulfite and pyrite. Nitrate reduction rate was the highest in the enrichment with thiosulfate. Denitrification was stimulated and no DNRA was observed with thiosulfate, while both denitrification and DNRA were stimulated with elemental sulfur. Metagenomes of the enrichments were assembled and binned into ten genomes. The enriched populations with thiosulfate included Thiobacillus, Lentimicrobium, Sulfurovum and Hydrogenophaga, all of which contained genes involved in sulfur oxidation. Elemental sulfur-based DNRA was performed by Thiobacillus (with NrfA and NirB) and Nocardioides (with only NirB). Our study established a link between sulfur sources, nitrate reduction pathways and microbial populations.

Changes in forest nitrogen cycling across deposition gradient revealed by δ15N in tree rings

Tree rings provide valuable insight into past environmental changes. This study aimed to evaluate perturbations in tree ring width (TRW) and δ¹⁵N alongside soil acidity and nutrient availability gradients caused by the contrasting legacy of air pollution (nitrogen [N] and sulphur [S] deposition) and tree species (European beech, Silver fir and Norway spruce). We found consistent declines of tree ring δ¹⁵N, which were temporarily unrelated to the changes in the TRW. The rate of δ¹⁵N change in tree rings was related to the contemporary foliar carbon (C) to phosphorus (P) ratio. This observation suggested that the long-term accumulation of ¹⁵N depleted N in tree rings, likely mediated by retained N from deposition, was restricted primarily to stands with currently higher P availability. The shifts observed in tree-ring δ¹⁵N and TRW suggest that acidic air pollution rather than changes in stand productivity determined alteration of N and C cycles. Stable N isotopes in tree rings provided helpful information on the trajectory of the N cycle over the last century with direct consequences for a better understanding of future interactions among N, P and C cycles in terrestrial ecosystems.

Zinc in soil reflecting the intensive coal mining activities: Evidence from stable zinc isotopes analysis

In the mining area affected by coal mining activities for a long time, heavy metal Zn pollution poses a serious threat to soil quality and human health, and direct evidence showing the relationship between Zn accumulation mechanism in soils and mining activities is lacking. In this study, the Zn content and isotopes composition (δ⁶⁶Zn) from soil and environmental samples around mining area were determined and analyzed to clarify the Zn characteristics in soil. Moreover, the distribution and source of Zn content in soil of mining area were analyzed by mathematical statistics, correlation analysis and isotope mass mixing model. The results showed that: (1) the Zn content in soil ranged from 95 to 327 mg·kg^-1 (mean: 233 mg·kg^-1), exceeding the control point and the soil background value of Anhui Province; (2) the results of Zn isotope analysis showed that Zn in soil mainly derived from the wind dispersion input of fine particles in gangue and fly ash, followed by the natural weathering of parent material; (3) isotopic mass mixing model can be used to distinguish the contribution of anthropogenic and natural Zn sources. Mining input was the main contribution source of Zn in soil (mean: 67%), followed by natural background (mean: 33%). The employment of Zn isotopes can effectively evaluate the impact of anthropogenic and natural long-term processes on Zn in the soil of the mining area, and provide important information for the formulation of soil metal pollution control measures.

Nitrogen isotope constraint on the zonation of multiple transformations between dissolved and particulate organic nitrogen in the Changjiang plume

Information on the sources and transformations of particulate organic N (PN) and dissolved organic N (DON) at the coastal interface remains insufficient due to technological difficulties and complicated features of intensive physical mixing and rapid biological activities. Here, we investigated the spatial distribution of concentrations and isotopic compositions of PN and DON in the Changjiang plume during the summer flood period. In average, DON and PN accounted for 25.6 ± 12.1% and 8.1 ± 9.1% (n = 55), respectively, of the total N pool, with the remaining N primarily in the form of nitrate (NO₃^-). Mean δ¹⁵N values were the lowest for DON (-0.1 ± 2.7‰, n = 58) and slightly higher for PN (2.0 ± 1.6‰, n = 101), and the highest for NO₃^- (6.5 ± 2.2‰, n = 67), suggesting multiple transformations had occurred to differentiate isotopic characteristics among the three N pools. By applying a conservative mixing model, we found DON deficits (-3.5 ± 3.7 μmol L^-1, n = 43) and negative shift in δ¹⁵N_DON (-3.6 ± 2.2‰, n = 43) in the Changjiang plume, revealing nonconservative DON behaviors. In the offshore surface plume where Chlorophyll a was high, the most likely cause is the DON uptake by phytoplankton with a strong inverse isotope effect (around -40‰). This DON assimilation by phytoplankton contributed to ~16 ± 12% of the PN production, with the remaining supported by NO₃^- assimilation, producing an overall isotope effect of 4-9‰. However, in waters near the river mouth and at the bottom of the offshore plume where total suspended matter concentrations were high (>5 mg L^-1), the DON deficit was most likely induced by the selective adsorption of ¹⁵N enriched moieties of DON onto particulate surfaces (with an isotope effect of -20‰ to -5‰). Unlike dissolved organic carbon to behave conservatively in most estuaries, our results show that active transformations had occurred between the DON and PN pools in the Changjiang plume.

Mercury in sediment reflecting the intensive coal mining activities: Evidence from stable mercury isotopes and Bayesian mixing model analysis

Severe environmental issues are caused by long-term coal mining activities; however, the process of mercury (Hg) response in mining subsidence area sediments (MSAS) is still unclear, and direct evidence showing the relationship between Hg accumulation mechanism in sediments and mining activities is lacking. In this study, the characteristics of total mercury (THg) content in MSAS were investigated. Moreover, Hg isotopes were obtained to determine the main sources and environmental process of mercury in MSAS, and a MixSIAR mixing model was first used to estimate the potential Hg sources. The THg content ranged from 27.5 to 113.9 ng/g, with a mean of 65.8 ± 29.4 ng/g, exceeding the local soil background value (19.7 ng/g). The Hg in MSAS was affected by clay and organic matter. The Δ199Hg and Δ201Hg in the sediments varied from - 0.05-0.05‰ (mean: -0.01 ± 0.03‰) and - 0.07-0.01‰ (mean: -0.02 ± 0.03‰), respectively, with the fitting results suggesting that a photochemical reaction occurred in some of the Hg in the sediments prior to deposition. The results of the MixSIAR mixing model revealed that the Hg in MSAS was mainly derived from gangue, soil erosion, coal, fly ash, and feed, and their corresponding percentage contribution was 51.5 ± 9.6%, 23.8 ± 13.1%, 13.9 ± 7.9%, 8.1 ± 5.4%, and 3.1 ± 1.4%, respectively. Hg isotopes can be used to trace the transport and transformation of environmental pollutants, and this may provide an important reference for the assessment and prevention of Hg pollution in typical areas such as coal mining and coal-fired.

Study on stable carbon isotope fractionation of rape honey from rape flowers (Brassica napus L.) to its unifloral ripe honey

A new idea and strategy for honey traceability and identification was provided by studying the carbon isotope fractionation of rape honey and its components in the different ripening process, as well as the fractionation from rape flowers, stamens, nectar to rape honey. The results showed the moisture content of rape honey continued to decrease, and the glucose and fructose content continued to increase during the ripening process. The δ¹³C of rape honey and its protein were less affected by honey ripeness, while the δ¹³C of sugars in rape honey were greatly affected by this. At the same time, the fractionation of carbon isotope from rape flowers to honey was significant. The δ¹³C of rape honey and its protein, disaccharide, fructose, and glucose had a strong correlation, and the δ¹³C of rape honey and its components were mainly related to rape flowers and its stamens.

A review on moss nitrogen and isotope signatures evidence for atmospheric nitrogen deposition

Moss nitrogen (N) concentration and isotopic composition (δ¹⁵N) values can reveal a better understanding of atmospheric N deposition patterns. Here, we summarize the moss N content and δ¹⁵N signatures using data compiled from 104 papers. Based on the dataset, we summarize the models for assessing the level and reduced (NH_x): oxidised compounds (NO_x) ratio of atmospheric N deposition. Results showed a historical increase in N concentration and ¹⁵N depletion of specimen mosses close to anthropogenic N sources from intensive animal production and agricultural activities (NH_x emission) since the 1800s. However, an increase of moss N with a less negative ¹⁵N observed in the last three decades could be due to a substantial fossil fuel combustion contributed NO_x emission. Spatially, N deposition in Europe decreased due to successful control actions, but Asia has become a hotspot for NH_x emission from agriculture. The present results highlight the importance of moss N and δ¹⁵N values for estimating atmospheric N deposition patterns at spatio-temporal trends.

Distribution, behavior and budget of Pb in suspended particles in the Changjiang Estuary and adjacent east China sea

Content, isotopes and budget of Pb in suspended particulate matter (SPM) in the Changjiang Estuary and adjacent East China Sea (ECS) were determined to investigate the biogeochemical cycling of particulate Pb in coastal sea. The content of particulate Pb ranged from 11.3 to 669.4 μg/g in February (winter) and from 20.1 to 79.4 μg/g in August (summer). Except in surface water, particulate Pb content in August is higher than that in February. In lower water, particulate Pb and Th and SPM all decreased gradually from the estuary towards the sea, indicating their lithogenic origin from the Changjiang River. Particulate Pb displayed abnormally high concentration in February surface water, resulting from the atmospheric deposition of anthropogenic Pb in winter. ²⁰⁸Pb/²⁰⁶Pb and ²⁰⁷Pb/²⁰⁶Pb in surface water north to the estuary were higher than background values, suggesting anthropogenic disturbance of Pb. Particulate Pb content in the Changjiang River and the estuary had increased by 77-78% from the 1980s to 2016 due to pollution. Pb was also scavenged by organic matter, leading to higher Pb content in waters with high productivity. Budget of particulate Pb in the northern ECS was established. The Changjiang River contributed 97.0% and 58.1% of particulate Pb input in summer and winter half year, respectively. 88.8% of particulate Pb was deposited in the estuary and adjacent coastal sea in summer but 88.7% was exported with southward coastal currents in winter.