Fine-scale determinants of conservation value of river reaches in a hotspot of native and non-native species diversity

Assessing the effectiveness of terrestrial protected areas towards riverine ecosystems

Protected areas are one of the main tools for biological conservation worldwide. They have been designed largely focused on terrestrial and marine habitats and species, despite the worldwide deterioration of freshwater ecosystems. Yet, the effectiveness of terrestrial protected areas towards the protection freshwater ecosystems located within their borders is still poorly known and the few studies on the subject have yielded mixed results. Historical records on benthic diatom communities and environmental data, gathered in 174 Portuguese streams (128 inside terrestrial protected areas and 91 without any kind of statutory protection), were used to explore trends in biological quality and biodiversity in response to the existence of a protection status (spatial comparisons) and of different protection categories. Temporal comparisons were also made, when data was available. The biological quality was assessed using the Indice de Polluosensibilité Spécifique (IPS) and data on diatom traits such as life-forms, ecological guilds, or cell size. The results suggest that although terrestrial protected areas don't have the conservation of freshwater ecosystems as a priority, they can contribute nonetheless to their preservation, since both the biological quality and the average abundance of threatened species were significantly higher inside terrestrial protected areas. Yet, the diversity of diatom communities wasn't significantly different when comparing protected and unprotected sites. The existence of several cumulative protection categories towards que quality of freshwater ecosystems didn't always prove beneficial. In particular RAMSAR sites didn't provide additional protection when compared to other protection categories. Our results reinforce the need to designate dedicated freshwater protected areas as an effective way to preserve these ecosystems in all their components.

Community-wide correlations between species richness, abundance and population genomic diversity in a freshwater biodiversity hotspot

Understanding patterns of diversity across macro (e.g. species-level) and micro (e.g. molecular-level) scales can shed light on community function and stability by elucidating the abiotic and biotic drivers of diversity within ecological communities. We examined the relationships among taxonomic and genetic metrics of diversity in freshwater mussels (Bivalvia: Unionidae), an ecologically important and species-rich group in the southeastern United States. Using quantitative community surveys and reduced-representation genome sequencing across 22 sites in seven rivers and two river basins, we surveyed 68 mussel species and sequenced 23 of these species to characterize intrapopulation genetic variation. We tested for the presence of species diversity-abundance correlations (i.e. the more-individuals hypothesis, MIH), species-genetic diversity correlations (SGDCs) and abundance-genetic diversity correlations (AGDCs) across all sites to evaluate relationships between different metrics of diversity. Sites with greater cumulative multispecies density (a standardized metric of abundance) had a greater number of species, consistent with the MIH hypothesis. Intrapopulation genetic diversity was strongly associated with the density of most species, indicating the presence of AGDCs. However, there was no consistent evidence for SGDCs. Although sites with greater overall densities of mussels had greater species richness, sites with higher genetic diversity did not always exhibit positive correlations with species richness, suggesting that there are spatial and evolutionary scales at which the processes influencing community-level diversity and intraspecific diversity differ. Our work reveals the importance of local abundance as indicator (and possibly a driver) of intrapopulation genetic diversity.

Streams in the Mediterranean Region are not for mussels: Predicting extinctions and range contractions under future climate change

Climate change is becoming the leading driver of biodiversity loss. The Mediterranean region, particularly southwestern Europe, is already confronting the consequences of ongoing global warming. Unprecedented biodiversity declines have been recorded, particularly within freshwater ecosystems. Freshwater mussels contribute to essential ecosystem services but are among the most threatened faunal groups on Earth. Their poor conservation status is related to the dependence on fish hosts to complete the life cycle, which also makes them particularly vulnerable to climate change. Species Distribution Models (SDMs) are commonly used to predict species distributions, but often disregard the potential effect of biotic interactions. This study investigated the potential impact of future climate on the distribution of freshwater mussel species while considering their obligatory interaction with fish hosts. Specifically, ensemble models were used to forecast the current and future distribution of six mussel species in the Iberian Peninsula, including environmental conditions and the distribution of fish hosts as predictors. We found that climate change is expected to severely impact the future distribution of Iberian mussels. Species with narrow ranges, namely Margaritifera margaritifera and Unio tumidiformis, were predicted to have their suitable habitats nearly lost and could potentially be facing regional and global extinctions, respectively. Anodonta anatina, Potomida littoralis, and particularly Unio delphinus and Unio mancus, are expected to suffer distributional losses but may gain new suitable habitats. A shift in their distribution to new suitable areas is only possible if fish hosts are able to disperse while carrying larvae. We also found that including the distribution of fish hosts in the mussels' models avoided the underprediction of habitat loss under climate change. This study warns of the imminent loss of mussel species and populations and the urgent need of management actions to reverse current trends and mitigate irreversible damage to species and ecosystems in Mediterranean regions.

Patterns of species richness, abundance and individual-size distributions in native stream-fish assemblages invaded by exotic and translocated fishes

Predicting the impacts of species introductions long has attracted the attention of ecologists yet there still is limited insight into how impacts on native assemblages vary with the degree of shared evolutionary context. Here, we used data from 535 stream-fish surveys from 15 catchments in north-eastern Spain (99,700 km²) to explore whether the relative effects on native fishes differ between fish introductions from two different ecoregions (i.e., evolutionary contexts), namely, catchments within Iberian Peninsula (i.e., 'translocated species') and catchments beyond Iberian Peninsula (i.e., 'exotic fishes'). We used hierarchical Bayesian models to relate taxon richness, abundance, and the individual-size distributions (ISDs) of native fishes to the presence, abundance, and weighted trophic level (TL) of translocated and exotic fishes, conditional on geographic and habitat covariates. Environmental covariates dominated the percentage of explained variance (≥ 65%) for all responses. Translocated fishes accounted for more of the explained variance than did exotic fishes for ISDs and abundance, but not for native fish species richness. The presence of translocated fishes was associated with lower abundance and richness of native fishes, with individuals being smaller in the presence of translocated fishes of higher TL. The presence of exotic fishes was associated with a greater abundance and richness of native fishes, with individuals generally being larger in the presence of exotic fishes. Our study suggests that translocated fishes could be as problematic as exotic fishes when angling and water transfers among catchments to deal with climate change may increase the establishment of translocated fishes. We also discuss the difficulties of using fish body size as species-blind, transferable assemblage-level trait in fish monitoring.

A Fine-Scale Hotspot at the Edge: Epigean Arthropods from the Atacama Coast (Paposo-Taltal, Antofagasta Region, Chile)

Simple Summary

The identification and surveying of fine-scale or micro-hotspots of biodiversity is a crucial strategy for better driving conservation efforts at global hotspots. This seems to be especially relevant at the edges of environments suitable for life, i.e., in desert margins with high levels of endemism, such as the Atacama coast. We surveyed a 100 km section of the Atacama coast including the emblematic Paposo and Taltal sites. We studied the taxonomic composition, richness, and abundance of terrestrial arthropods and were able to identify 173 arthropod species grouped into 118 genera and 57 families. The most abundant orders were Hymenoptera, Coleoptera, and Collembola, which accounted for 90.0% of the total captured. Most abundant families were Melyridae (Coleoptera), Poduridae (Collembola), Tenebrionidae (Coleoptera), and an indeterminate family of Psocoptera. Among remarkable Coleoptera, we were able to register Ectinogonia barrigai (Buprestidae) and Luispenaia paposo (Scarabaeidae). We also documented the presence of the tenebrionid Gyriosomus angustus, and several species of the genera Nycterinus (Paranycterinus) and Scotobius. We also could find the four species of scorpions that have been described for the Paposo area recently, and an undescribed species. The relevance of the area for future prospections and as a conservation site and a fine-scale hotspot of biodiversity has been confirmed based on the epigean arthropods.

Abstract

The Atacama Desert at its margins harbors a unique biodiversity that is still very poorly known, especially in coastal fog oases spanning from Perú towards the Atacama coast. An outstanding species-rich fog oasis is the latitudinal fringe Paposo-Taltal, that is considered an iconic site of the Lomas formation. This contribution is the first to reveal the knowledge on arthropods of this emblematic coastal section. We used pitfall traps to study the taxonomic composition, richness, and abundance of terrestrial arthropods in 17 sample sites along a 100 km section of the coast between 24.5 and 25.5 southern latitude, in a variety of characteristic habitats. From a total of 9154 individuals, we were able to identify 173 arthropod species grouped into 118 genera and 57 families. The most diverse group were insects, with 146 species grouped in 97 genera and 43 families, while arachnids were represented by 27 species grouped into 21 genera and 14 families. Current conservation challenges on a global scale are driving the creation and evaluation of potential conservation sites in regions with few protected areas, such as the margins of the Atacama Desert. Better taxonomic, distributional, and population knowledge is urgently needed to perform concrete conservation actions in a biodiversity hotspot at a desert edge.

Liver biomarkers response of the neotropical fish Aequidens metae to environmental stressors associated with the oil industry

The Acacias River in Colombia receives large volumes of industrial effluents mostly derived from the oil industry. To contribute to the study of the possible effects of industrial wastewaters on the aquatic environment and particularly on fish populations, a native neotropical fish, Aequidens metae was used as a sentinel species. Wild specimens of A. metae were caught at three different places of the Acacias River taking as reference the point of discharge of an oil industry effluent; upstream, downstream, and at the vicinity of the discharge pipe. A fourth sampling site was chosen as a reference site away from urban settlements. Samplings were performed twice, during the rainy and dry seasons. After anesthesia animals were weighted and measured, and humanely sacrificed. Livers were extracted, frozen on site and transported to the laboratory. Condition indices were calculated. Total protein content and the detoxification 7-ethoxyresorufin-O-deethylase (EROD) enzyme activity were estimated. Histopathological alterations were also evaluated. Water quality was estimated through the measurement of several variables. Results obtained evidenced that the highest induction in EROD activity and the strongest histological alterations in liver of the monitored fish appeared during the dry seasons at the discharge site and downstream to this point.

Biochemical aspects of susceptibility to stressors in two small cyprinids Squalius laietanus and Barbus meridionalis from the NW Mediterranean

Specimens of two endemic cyprinids, Squalius laietanus (Catalan chub) and Barbus meridionalis (Mediterranean barbel), were sampled from a reference site in a small stream of the Ripoll River (NW Mediterranean) outside of their reproductive season. Biomarkers involved in xenobiotic-mediated responses were individually contrasted in fish of both species and 17 perfluoroalkyl substances (PFASs) analysed in muscle to reveal bioaccumulation trends. The parameters were in muscle: cholinesterases, metabolic lactate dehydrogenase (LDH) and citrate synthase (CS); and in liver: cytochrome P450 dependent activities (EROD and BFCOD), carboxylesterase (CE), glutathione S-transferase (GST), glutathione reductase (GR), glutathione peroxidase (GPX) and catalase (CAT). All markers are considered adaptive defence mechanism to face stress. Sensitivity to a model pesticide: dichlorvos was also contrasted in vitro in muscular acetylcholinesterase (AChE) and hepatic CE to reveal species sensitivity to neurotoxic chemicals. Enzymatic activities related to protective mechanisms such as butyrylcholinesterase (BuChE), CE and CAT were higher in chub whereas the antioxidant defences GR and GPX were higher in barbel. Aerobic CS was also higher in barbel while anaerobic LDH was so in chub. EROD activity did not differ between the two species but BFCOD activity was higher in barbel. Levels of PFAS were higher in barbel likely due to its benthic habitat. The in vitro tests revealed higher sensitivity to dichlorvos of muscular AChE in chub (lower IC50) which was probably compensated by a higher catalytic efficiency of CE. All these former biochemical particularities are discussed in terms of fish ecological performance in front of anthropogenic stressors.

Managing small, highly prolific invasive aquatic species: Exploring an ecosystem approach for the eastern mosquitofish (Gambusia holbrooki)

Invasive exotic species threaten native biodiversity worldwide and their management is on the agenda of an increasing number of countries. We explored the potential of an ecosystem approach for the natural control of Gambusia holbrooki, which is among the most pernicious and widely distributed fish invaders. Individual-based linear mixed models were used to identify the ecosystem factors (conspecific density, environment and piscivorous birds) that most influenced life-history variation in male and female G. holbrooki (N = 654). All traits (body condition, growth, length, gonad weight, offspring size and number, real and potential fertility) were associated with at least one ecosystem factor from the 18 water bodies surveyed in north-eastern Spain. Models for female reproductive traits had the highest fit (R² = 0.89) and those for body condition in both sexes the lowest (0.12). The life history of G. holbrooki was mostly affected by its density; increasing offspring number at the expense of offspring size at the sites with the highest fish density. Weaker effects on G. holbrooki life history were observed for the abundance of piscivorous birds and water-quality conditions, including turbidity and nutrient concentrations. Although effects were not consistent between traits, outputs supported that G. holbrooki has a wide tolerance to changes in water quality. Therefore, actions based solely on environmental changes within the range tested probably will fail in reducing the proliferation of G. holbrooki, especially if its body condition improved at the most naturalised sites. Overall, this study suggests that the management of G. holbrooki using ecologically sound treatments is likely to be very difficult in stagnant waters. Preventing new introductions and direct removal once established are the most appropriate actions for the management of this small, highly prolific fish invader.

Ecologically relevant biomarkers reveal that chronic effects of nitrate depend on sex and life stage in the invasive fish Gambusia holbrooki

Agricultural intensification and shifts in precipitation regimes due to global climate change are expected to increase nutrient concentrations in aquatic ecosystems. However, the direct effects of nutrients widely present in wastewaters, such as nitrate, are poorly studied. Here, we use multiple indicators of fish health to experimentally test the effects of three ecologically relevant nitrate concentrations (<10, 50 and 250 mg NO₃^-/l) on wild-collected mosquitofish (Gambusia holbrooki), a species widely introduced for mosquito biocontrol in often eutrophic waters. Overall, biomarkers (histopathology, feeding assays, growth and caloric content and stable isotopes as indicators of energy content) did not detect overt signs of serious disease in juveniles, males or females of mosquitofish. However, males reduced food intake at the highest nitrate concentration compared to the controls and females. Similarly, juveniles reduced energy reserves without significant changes in growth or food intake. Calorimetry was positively associated with the number of perivisceral fat cells in juveniles, and the growth rate of females was negatively associated with δ¹⁵N signature in muscle. This study shows that females are more tolerant to nitrate than males and juveniles and illustrates the advantages of combing short- and long-term biomarkers in environmental risk assessment, including when testing for the adequacy of legal thresholds for pollutants.

Environmental correlates of food-chain length, mean trophic level and trophic level variance in invaded riverine fish assemblages

Examining how the trophic structure of biotic assemblages is affected by human impacts, such as habitat degradation and the introduction of alien species, is important for understanding the consequences of such impacts on ecosystem functioning. We used general linear mixed models and hierarchical partitioning analyses of variance to examine for the first time the applicability of three hypotheses (ecosystem-size, productivity and disturbance) for explaining food-chain length (FCL) in invaded fish assemblages. We used Fishbase trophic level (TL) estimates for 16 native and 18 alien fish species in an extensive riverine system in north-eastern Spain (99,700 km², 15 catchments, 530 sites). The FCL of assemblages ranged from 2.7 to 4.42. Ecosystem size-related variables (Strahler stream order, physical habitat diversity) and human-disturbance (conductivity) made the largest contribution to the explained variance in the FCL model after accounting for spatial confounding factors and collinearity among predictors. Within-assemblage TL also was positively associated with Strahler stream order, suggesting that large rivers have the highest trophic diversity. High conductivity was negatively associated with FCL, as did with the mean TL of fish assemblages. However, an inverse association was found between mean TL and Strahler stream order, possibly because the presence of fish species of high TL may be offset by larger numbers of alien species of lower TL in large rivers. Given that there may be trophic replacements among native and alien species, this inference needs to be addressed with detailed trophic studies. However, reducing water conductivity by improved wastewater treatment and better agricultural practices probably would help to conserve the fish species on the apices of aquatic food-webs.

Life-history strategies in zooplankton promote coexistence of competitors in extreme environments with high metal content

The toxicity of pollutants on aquatic communities is determined by the specific sensitivities and by the ecological relationships between species, although the role of ecological interactions on the specific sensitivity to pollutants is complex. We tested the effect of exposure to copper on the life-history strategies of two coexisting rotifer species of the genus Brachionus from Inca-Coya lagoon, an isolated water body located in Atacama Desert. The experiments looked at differences in the response to the stress by chemical pollution mimicking field conditions of copper exposure, levels of food, and salinity, between single-species cultures and coexisting species. Under single species cultures, B. ‘Nevada’ had lower densities, growth rates, and resting eggs production than B. quadridentatus; when in competition, B. ‘Nevada’ performed better than B. quadridentatus in most life-history traits. B. ‘Nevada’ was a copper-tolerant species, which outcompeted B. quadridentatus, more copper-sensitive, with higher levels of copper. Species-specific responses to environmental conditions and pollution, plus differential relationships between population density and production of resting eggs, resulted in reduced niche overlap between species, allowing stabilized coexistence. The extreme environmental conditions and the isolation of the Inca-Coya lagoon, make it an excellent model to understand the adaption of aquatic organisms to stressed environments.

Functional diversity measures revealed impacts of non-native species and habitat degradation on species-poor freshwater fish assemblages

Trait-based ecology has been developed for decades to infer ecosystem responses to stressors based on the functional structure of communities, yet its value in species-poor systems is largely unknown. Here, we used an extensive dataset in a Spanish region highly prone to non-native fish invasions (15 catchments, N=389 sites) to assess for the first time how species-poor communities respond to large-scale environmental gradients using a taxonomic and functional trait-based approach in riverine fish. We examined total species richness and three functional trait-based indices available when many sites have ≤3 species (specialization, FSpe; originality, FOri and entropy, FEnt). We assessed the responses of these taxonomic and functional indices along gradients of altitude, water pollution, physical habitat degradation and non-native fish biomass. Whilst species richness was relatively sensitive to spatial effects, functional diversity indices were responsive across natural and anthropogenic gradients. All four diversity measures declined with altitude but this decline was modulated by physical habitat degradation (richness, FSpe and FEnt) and the non-native:total fish biomass ratio (FSpe and FOri) in ways that varied between indices. Furthermore, FSpe and FOri were significantly correlated with Total Nitrogen. Non-native fish were a major component of the taxonomic and functional structure of fish communities, raising concerns about potential misdiagnosis between invaded and environmentally-degraded river reaches. Such misdiagnosis was evident in a regional fish index widely used in official monitoring programs. We recommend the application of FSpe and FOri to extensive datasets from monitoring programs in order to generate valuable cross-system information about the impacts of non-native species and habitat degradation, even in species-poor systems. Scoring non-native species apart from habitat degradation in the indices used to determine ecosystem health is essential to develop better management strategies.

The presence of non-native species is not associated with native fish sensitivity to water pollution in greatly hydrologically altered rivers

There is a risk of 'ecological surprises' if multiple potentially interacting stressors are managed individually, which is a question attracting significant current interest. Habitat degradation and species introductions are major threats to global biodiversity, and riverine fish are among the most threatened taxa in the world. Our interest was whether the presence of non-native species can affect native fish sensitivity to water quality deterioration in a large region in northeastern Spain (99,700km², 15 catchments, 530 sites). We used a 'base model' with geographical and hydro-morphological variables, which are the major shaping factors in rivers. We tested whether water pollution, non-native species, or their interaction provided an improved understanding of patterns of distributions and health measurements of the twelve most common native species. There was little evidence that variation in native species abundance, where they occurred, the presence of diseases and changes in mean fish length or body condition was affected by water deterioration, the presence of non-native species, or their interaction. The disease rate and occurrence of native species might be affected, to a minor degree, by water quality changes and the presence of non-native species. Environmental conditions between sites with and without non-native fish differed in the condition of riparian areas and in water quality. Based on presence-absence data and changes in abundances through weighted average equations we also derived potential safe levels of salinization, nutrient pollution, and pH for the native fish. Overall, additive effects of stressors prevail over interactions, and the restoration of natural hydro-morphology in rivers is likely to be the most effective management approach to improving the prospects for the native fish fauna.