Mercury speciation, bioavailability, and biomagnification in contaminated streams on the Savannah River Site (SC, USA)

Utilizing biochars to stabilize mercury in contaminated floodplain sediment: Implications on mercury remediation

Major weather events contribute to the mobility and remobilization of legacy mercury (Hg) contamination and sequestration within sediments. Remediation using biochar as a soil amendment is a useful technique to immobilize and decrease Hg toxicity. This study explored whether biochar application is effective at stabilizing labile mercury (LaHg) from floodplain sediment. Controlled mesocosms simulating contamination events and flooding conditions were conducted. Floodplain sediment, which experiences annual periodic flooding, was collected. Sediment was spiked with inorganic Hg, applied with different types of biochar, and experienced simulated flooding events. Four types of biochar, pure rice husk (RH), pure peanut hull (PH), sulfur-modified rice husk (SMRH), and sulfur-modified peanut hull (SMPH), were applied at 10 and 40 g/kg rates (i.e., RH 10, RH 40; PH 10, PH 40, SMRH 10, SMRH 40, SMPH 10, SMPH 40). Total Hg, methylmercury, and LaHg concentrations were analyzed by coupling with redox potential measurements. Results indicate that SMRH 10, PH 10, PH 40, SMPH 10, and SMPH 40 successfully remediate Hg by stabilizing and reducing LaHg species from floodplain sediment. However, a high Hg methylation potential was observed with unsulfated and sulfated peanut hulls (PH 10, PH 40, SMPH 10, and SMPH 40), as they tend to create a reducing microenvironment that favors sulfate reduction reactions. Additionally, sulfur-modified biochar tends to promote Hg methylation potential at high application rates (i.e., 40 g/kg). We thus recommend using SMRH at a relatively low application rate (SMRH 10) for the remediation of Hg from floodplain sediment.

Comparison of mercury (Hg) bioaccumulation with mono- and mixed Lemna minor and Spirodela polyrhiza cultures

Mercury (Hg) is a prevalent and harmful contaminant that persists in the environment. For phytoremediation, it is important to discover which plants can bioaccumulate meaningful amounts of Hg while also tolerating its toxicity. Additionally, increasing biodiversity could create a more resilient and self-sustaining system for remediation. This study explores whether mixed populations of Lemna minor and Spirodela polyrhiza can better bioaccumulate and tolerate Hg than monocultures. Mono- and mixed cultures of L. minor and S. polyrhiza were grown in mesocosms of 0.5 µg/L or 100 µg/L Hg (HgCl2) spiked water for 96 h. Change in weight of duckweed was used to assess Hg tolerance. Diffusive gradients in thin-films (DGTs) were used as surrogate monitoring devices for bioavailable levels of Hg. For biomass growth, the mixed culture of the L. minor was greater than the monoculture at the high dose. The L. minor accumulated more Hg in the mixed culture at the low dose while the S. polyrhiza was higher in the mixed at the high dose. Hg speciation in water was modeled using Windermere Humic Aqueous Model 7 (WHAM7) to compare the bioavailable species indicated by the DGTs.  Potentially due to the controlled conditions, the WHAM7 output of bioavailable Hg was almost 1:1 to that estimated by the DGTs, indicating good predictive capability of geochemical modeling and passive sampler DGT on metal bioavailability. Overall, the mixed cultures statistically performed as well as or better than the monocultures when tolerating and bioaccumulating Hg. However, there needs to be further work to see if the significant differences translate into practical differences worth the extra resources to maintain multiple species.

Differential accumulation of metals in the lacustrine and fluvial Alpine bullheads (Cottus poecilopus) and recovery of fish from metal contamination after a flash flood

The spatiotemporal distribution and transport of mercury, zinc, molybdenum, rubidium, and strontium from alpine terrestrial ecosystems to alpine lake and mountain stream populations of Cottus poecilopus were investigated. Metals were measured for 66 wild fish collected from different lakes and Javorinka stream across. Mercury was measured in the pectoral fins, other elements in the skull. Bullheads contained more metals in the alpine lakes than in the mountain stream. In particular, mercury and zinc concentrations in lake bullheads were 6 and 2.5 times higher, respectively, than those of stream-dwelling fish. New data were generated on metal bioaccumulation in fish of understudied West Carpathian alpine lake environments. In July 2018, a major flood occurred in the area of the Javorinka. Already then, the mercury content in bullheads increased significantly. Bioaccumulation of mercury in fish occurred very quickly after the flood and was also significant in the following 2019. Then, the concentrations of mercury quickly decreased up to 70% in 2021-2022. Average concentrations of molybdenum and rubidium in bullheads in the stream rapidly declined in the year following the flood disturbance, but within less than 2 years, the metal levels stabilized at about the same level as in 2017 prior the flood. Strontium concentrations in fish dropped rapidly immediately after the flood, increased in the following years, and dropped again after 4 years, suggesting that many more factors are influencing strontium bioaccumulation in fish that are comparable in magnitude to the flood. The most serious warning seems to be the absence of biogenic zinc. The average concentration in the Alpine bullheads population in the stream has declined by 70% in less than 5 years and is steadily declining. An important result of this study is the demonstration that disturbance by a single factor (heavy rainfall and flooding) has a clear and timely effect on average metal concentrations in the fish population.

Mercury methylation potential and bioavailability in the sediments of two distinct aquatic systems

This study explored mercury (Hg) methylation potential in two distinct aquatic systems. Fourmile Creek (FMC) was historically polluted with Hg effluents from groundwater as it is a typical gaining stream, where organic matter and microorganisms in streambed are continuously winnowed. The H02 constructed wetland only receives atmospheric Hg and is rich in organic matter and microorganisms. Both systems receive Hg from atmospheric deposition now. Surface sediments were collected from FMC and H02, spiked with inorganic Hg, and cultivated in an anaerobic chamber to stimulate microbial Hg methylation reactions. Total mercury (THg) and methylmercury (MeHg) concentrations were measured at each spiking stage. Mercury methylation potential (MMP, %MeHg in THg) and Hg bioavailability were assessed with the deployment of diffusive gradients in thin films (DGTs). During the methylation process and at the same incubation stage, FMC sediment showed faster increasing rates of %MeHg and higher MeHg concentrations than H02, demonstrating a stronger MMP in the FMC sediment. Similarly, higher Hg bioavailability was observed in FMC sediment compared to the H02 as indicated by DGT-Hg concentrations. In conclusion, the H02 wetland with high levels of organic matter and microorganisms presented low MMP. But the Fourmile Creek as a gaining stream and a historical site of Hg pollution showed strong MMP and high Hg bioavailability. A related study on microbial community activities characterized the microorganisms between FMC and H02, which is attributed to be the main reason for their different methylation capabilities. Our study further brought up the considerations on remediated sites from Hg contamination: Hg bioaccumulation and biomagnification can still be elevated and higher than the surrounding environment due to lagged changes in microbial community structures. This study supported the sustainable ecological modifications of legacy Hg contamination and raised the necessity of long-term monitoring actions even after executing a remediation plan.

Resupply, diffusion, and bioavailability of Hg in paddy soil-water environment with flood-drain-reflood and straw amendment

Mercury (Hg) poses a significant risk in paddy fields, particularly when it is converted to methylmercury (MeHg) and accumulates in rice. However, the bioavailability and resupply kinetics of Hg in the paddy soil-water environment are not well understood. In this study, the diffusive gradients in thin films (DGT) and the 'DGT-induced fluxes in sediments' model (DIFS) were first adopted to investigate the Hg resupply kinetics, diffusion fluxes and bioavailability in a paddy environment subjected to flood-drain-reflood treatment and straw amendment. Our results shown that although the straw amendment limited the bioavailability of Hg (38.2%-47.9% lower than control) in porewater by decreasing its resupply capacity, especially with smaller straw particles, the net production of MeHg in paddy fields was significantly increased after straw amendment (73.5%-77.9% higher than control). The results of microbial sequencing indicate that enhanced methylators (e.g., family Geobacter) and non-Hg methylators (e.g., Methanosarcinaceae) played a crucial role in MeHg production following straw amendment. Moreover, Hg-containing paddy soils generally tend to release Hg into the overlying water, while drain-reflood treatment changes the direction of Hg diffusion fluxes in the paddy soil-water interface. The drainage-reflooded treatment decreases the Hg reactive and resupply capacity of the paddy soil, thereby hindering the release of Hg from soil into overlying water during the early stages of reflooding. Overall, this study provides novel insights into the behavior of Hg in paddy soil-water surface microlayers.

Appraisal on the role of passive sampling for more integrative frameworks on the environmental risk assessment of contaminants

Over time multiple lines of research have been integrated as important components of evidence for assessing the ecological quality status of water bodies within the framework of Environmental Risk Assessment (ERA) approaches. One of the most used integrative approaches is the triad which combines, based on the weight-of-evidence, three lines of research, the chemical (to identify what is causing the effect), the ecological (to identify the effects at the ecosystem level) and the ecotoxicological (to ascertain the causes of ecological damage), with the agreement between the different lines of risk evidence increasing the confidence in the management decisions. Although the triad approach has proven greatly strategic in ERA processes, new assessment (and monitoring) integrative and effective tools are most welcome. In this regard, the present study is an appraisal on the boost that passive sampling, by allowing to increase information reliability, can give within each of the triad lines of evidence, for more integrative ERA frameworks. In parallel to this appraisal, examples of works that used passive samplers within the triad are presented providing support for the use of these devices in a complementary form to generate holistic information for ERA and ease the process of decision-making.

Mercury in wetlands over 60 years: Research progress and emerging trends

Wetlands are considered the hotspots for mercury (Hg) biogeochemistry, garnering global attention. Therefore, it is important to review the research progress in this field and predict future frontiers. To achieve that, we conducted a literature analysis by collecting 15,813 publications about Hg in wetlands from the Web of Science Core Collection. The focus of wetland Hg research has changed dramatically over time: 1) In the initial stage (i.e., 1959-1990), research mainly focused on investigating the sources and contents of Hg in wetland environments and fish. 2) For the next 20 years (i.e., 1991-2010), Hg transformation (e.g., Hg reduction and methylation) and environmental factors that affect Hg bioaccumulation have attracted extensive attention. 3) In the recent years of 2011-2022, hot topics in Hg study include microbial Hg methylators, Hg bioavailability, methylmercury (MeHg) demethylation, Hg stable isotope, and Hg cycling in paddy fields. Finally, we put forward future research priorities, i.e., 1) clarifying the primary factors controlling MeHg production, 2) uncovering the MeHg demethylation process, 3) elucidating MeHg bioaccumulation process to better predict its risk, and 4) recognizing the role of wetlands in Hg circulation. This research shows a comprehensive knowledge map for wetland Hg research and suggests avenues for future studies.

Biomonitoring of mercury in water, sediments, and fish (brown and rainbow trout) from remote alpine lakes located in the Himalayas, Pakistan

Mercury (Hg) contamination of aquatic ecological units and subsequent bioaccumulation are major environmental problems of international scope. Moreover, the biogeochemistry of Hg in the remote alpine lakes aquatic ecosystem in the Himalayas remains largely unexplored. The current study investigated Hg concentrations in different environmental compartments such as water, fish, and sediments in the remote alpine lakes (RALs) including Glacial-fed Lake, Ice melting-fed Lake, and Rain-fed Lake in northern areas of Pakistan. The mean concentration of Hg in Rain-fed Lake water was (1.07 µg L-1), Ice melting-fed Lake (1.16 µg L-1), and Glacial-fed Lake (1.95 µg L-1). For fish muscle tissues, mean concentration of Hg was 1.02 mg kg-1 in the Rain-fed Lake, and 1.2 mg kg-1 for the Ice melting-fed Lake, and 1.51 mg kg-1 in the Glacial-fed Lake. Meanwhile, 0.27 mg kg-1 was observed for sediments in the Rain-fed Lake, 0.33 mg kg-1 for the Ice melting-fed Lake, and 0.38 mg kg-1 for the Glacial-fed Lake, respectively. Chronic daily intake (CDI) and potential health quotient (PHQ) for water showed high health risk in Glacial-fed Lake and low in Rain-fed Lake (PHQ < 1). The target hazard quotient (THQ) values for both the Brown and Rainbow trout in all the studied lakes water were less than 1, indicating no health risk. Furthermore, the Hg level showed high level of contamination in the sediments of all the studied lakes (190 ≤ RI < 380). Overall, Glacial-fed Lake water was more polluted with Hg, as compared to Rain-fed Lake and Ice melting-fed Lake. In the light of the abovementioned results, further research work is urgently needed to shed light on the biological and geochemical monitoring of Hg in arid high-altitude ecosystems along with source identification, mercury speciation, and other potential pollutants.

Bioaccumulation of Mercury and Radiocesium in Waterfowl Introduced to a Site with Legacy Contamination

Despite the propensity of waterfowl species to readily accumulate anthropogenic contaminants within polluted environments, few studies have examined bioaccumulation rates over time when entering such a contaminated site. We examined mercury (Hg) and radiocesium (¹³⁷ Cs) bioaccumulation over time in two waterfowl species released into a wetland system containing legacy contamination on the US Department of Energy's Savannah River Site in South Carolina. Released birds were collected at select time intervals over an exposure period of 94 days. We quantified total Hg concentrations in blood, muscle, and liver tissues, and ¹³⁷ Cs activity in whole-body and muscle tissues. The relationship between the contaminant burdens of different body tissue types was examined over time. Likely a result of microhabitat selection, mallards in our study readily accumulated both Hg and ¹³⁷ Cs at consistent rates over time within our study system, while ring-neck ducks did not. The findings demonstrated that whole blood can be used as a robust, nondestructive sampling alternative to estimate Hg burdens within muscle and liver, and whole-body ¹³⁷ Cs activity is a good predictor of muscle burdens. Understanding such bioaccumulation information in waterfowl is useful for the assessment of the potential health risk in wildlife, as well as being important for human risk assessment toward the consumption of popular game species. Environ Toxicol Chem 2022;41:2479-2487. © 2022 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Mercury Accumulation in a Stream Ecosystem: Linking Labile Mercury in Sediment Porewaters to Bioaccumulative Mercury in Trophic Webs

Mercury (Hg) deposition and accumulation in the abiotic and biotic environments of a stream ecosystem were studied. This study aimed to link labile Hg in porewater to bioaccumulative Hg in biota. Sediment cores, porewaters, and biota were sampled from four sites along the Fourmile Branch (SC, USA) and measured for total Hg (THg) and methyl-Hg (MHg) concentrations. Water quality parameters were also measured at the sediment–water interface (SWI) to model the Hg speciation. In general, Hg concentrations in porewaters and bulk sediment were relatively high, and most of the sediment Hg was in the solid phase as non-labile species. Surface sediment presented higher Hg concentrations than the medium and bottom layers. Mercury methylation and MHg production in the sediment was primarily influenced by sulfate levels, since positive correlations were observed between sulfate and Hg in the porewaters. The majority of Hg species at the SWI were in non-labile form, and the dominant labile Hg species was complexed with dissolved organic carbon. MHg concentrations in the aquatic food web biomagnified with trophic levels (biofilm, invertebrates, and fish), increasing by 3.31 times per trophic level. Based on the derived data, a modified MHg magnification model was established to estimate the Hg bioaccumulation at any trophic level using Hg concentrations in the abiotic environment (i.e., porewater).

Utility of Diffusive Gradient in Thin-Film Passive Samplers for Predicting Mercury Methylation Potential and Bioaccumulation in Freshwater Wetlands

Mercury is a risk in aquatic ecosystems when the metal is converted to methylmercury (MeHg) and subsequently bioaccumulates in aquatic food webs. This risk can be difficult to manage because of the complexity of biogeochemical processes for mercury and the need for accessible techniques to navigate this complexity. Here, we explored the use of diffusive gradient in thin-film (DGT) passive samplers as a tool to simultaneously quantify the methylation potential of inorganic Hg (IHg) and the bioaccumulation potential of MeHg in freshwater wetlands. Outdoor freshwater wetland mesocosms were amended with four isotopically labeled and geochemically relevant IHg forms that represent a range of methylation potentials (²⁰²Hg²⁺, ²⁰¹Hg-humic acid, ¹⁹⁹Hg-sorbed to FeS, and ²⁰⁰HgS nanoparticles). Six weeks after the spikes, we deployed DGT samplers in the mesocosm water and sediments, evaluated DGT-uptake rates of total Hg, MeHg, and IHg (calculated by difference) for the Hg isotope spikes, and examined correlations with total Hg, MeHg, and IHg concentrations in sediment, water, and micro and macrofauna in the ecosystem. In the sediments, we observed greater relative MeHg concentrations from the initially dissolved IHg isotope spikes and lower MeHg levels from the initially particulate IHg spikes. These trends were consistent with uptake flux of IHg into DGTs deployed in surface sediments. Moreover, we observed correlations between total Hg-DGT uptake flux and MeHg levels in periphyton biofilms, submergent plant stems, snails, and mosquitofish in the ecosystem. These correlations were better for DGTs deployed in the water column compared to DGTs in the sediments, suggesting the importance of vertical distribution of bioavailable MeHg in relation to food sources for macrofauna. Overall, these results demonstrate that DGT passive samplers are a relatively simple and efficient tool for predicting IHg methylation and MeHg bioaccumulation potentials without the need to explicitly delineate IHg and MeHg speciation and partitioning in complex ecosystems.

The legacy of artisanal gold mining and its impact on fish health from Tapajós Amazonian region: A multi-biomarker approach

Tapajós Region, is an area with intense historical artisanal and small-scale gold mining. Therefore, the core objective of this study was to evaluate the environmental status of different rivers located in this region, using biomarker endpoints in Serrasalmus rhombeus as a tool. Fish and sediment were collected from two rivers, Tropas and Crepori, affluent of Tapajós River, located inside a Federal Protection Area and in a Reference site. Mercury concentration in sediment and fish were traced, and biomarkers in gills and liver were analyzed. Results showed a clear difference between these two rivers compared to the Reference site. Fish tissues presented biomarker responses according to the site of collection. Catalase (CAT) activity was statistically higher in fish gills from Crepori, confirming the capacity of mercury interference with redox equilibrium. High levels of lipid peroxidation were also noted to contribute greatly in incidence of morphological changes in the liver and gills, suggesting that mercury bioaccumulation during continuous exposure promote biological responses in a cumulative manner, from molecules to tissues. This study also indicates adaptation in fish defense mechanisms given the conditions in the Tropas River, as well as a variation in biomarker responses to that of the Crepori river. In summary, Tapajós affluents presented high mercury levels in fish tissues leading to biomarker responses, demonstrating a hazardous signal of a long history of mercury pollution.

Mercury Bioaccumulation in Benthic Invertebrates: From Riverine Sediments to Higher Trophic Levels

Riverine sediments are important sites of mercury methylation and benthic invertebrates may be indicators of Hg exposure to higher organisms. From 2014 to 2018, sediments and invertebrates were collected along a mercury gradient in the Toce River (Northern Italy) and analyzed for THg and MeHg. Concentrations in invertebrates, separated according to taxon and to Functional Feeding Group, ranged from 20 to 253 µg kg⁻¹ dry weight (d.w.) for THg, increasing from grazers (Leuctra, Baetis, Serratella) to predators (Perla). MeHg ranged from 3 to 88 µg kg⁻¹ d.w. in biota, representing 6–53% of THg, while in sediments it was mostly below LOD (0.7 µg kg⁻¹), accounting for ≤3.8% of THg. The Biota-Sediment Accumulation Factor (BSAF, ranging 0.2–4.6) showed an inverse relation to exposure concentrations (THg in sediments, ranging 0.014–0.403 µg kg⁻¹ d.w.) and to organic carbon. THg in invertebrates (up to 73 µg kg⁻¹ wet weight), i.e., at the basal levels of the aquatic trophic chain, exceeded the European Environmental Quality Standard for biota (20 µg kg⁻¹ w.w.), posing potential risks for top predators. Concentrations in adult insects were close to those in aquatic stages, proving active mercury transfer even to terrestrial food chains.

Mercury Bioavailability in Fluvial Sediments Estimated Using Chironomus riparius and Diffusive Gradients in Thin-Films (DGT)

Mercury bioavailability was assessed by exposing the dipteran Chironomus riparius for the whole life cycle to legacy-contaminated fluvial sediments (0.038–0.285 mg Hg kg−1 d.w.) and analyzing tissue concentrations in larvae at different exposure times (7, 11, and 16 days) and in adults. In the same experiment, diffusive gradients in thin-film passive samplers (DGTs), both piston- and probe-shaped, were co-deployed in the same sediments and retrieved at the same times as the organisms. To compare the two approaches, results showed a good agreement between accumulation kinetics of C. riparius and DGTs, both approximating an apparent steady-state. A strong correlation was found between values in tissues and in both types of DGTs (r between 0.74 and 0.99). Concentrations in mature larvae (19–140 µg kg−1 w.w.), which may represent a basal level of the aquatic food web, exceeded the European Environmental Quality Standard for biota (20 µg kg−1 w.w.), which aims at protecting the top predators from secondary poisoning. Body burdens in larvae and in adults were similar, showing negligible decontamination during metamorphosis and proving an efficient mercury transfer from sediments to terrestrial food webs.

Mercury bioaccumulation in stream fish from an agriculturally-dominated watershed

Bioaccumulation of mercury in freshwater fish is a complex process driven by environmental and biological factors. In this study, we assessed mercury in fish from four tributaries to the Red Deer River, Alberta, Canada, which are characterized by high surface water mercury concentrations. We used carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotopes to examine relationships between fish total mercury (THg) concentrations, food web dynamics and patterns in unfiltered THg and methylmercury (MeHg) concentrations. We found that THg concentrations exceeded the tissue residue quality guideline for the protection of wildlife consumers in 99.7% of fish sampled. However, while the surface water THg concentration was highest in Michichi Creek and the MeHg concentration was consistent across streams, patterns of fish THg concentrations varied depending on species. Furthermore, body size and trophic level were only correlated with THg concentrations in white sucker (Catostomus commersoni) and Prussian carp (Carrasius gibelio). The results of this study suggest that mercury poses a risk to the health of piscivorous wildlife in the Red Deer River watershed. Despite high THg concentrations in these streams, mercury bioaccumulation is not driven by environmental inorganic mercury concentrations. Additionally, commonly cited factors associated with mercury concentrations in fish, such as body size and trophic level, may not strongly influence bioaccumulation in these stream ecosystems.

Limitations of Applying Diffusive Gradients in Thin Films to Predict Bioavailability of Metal Mixtures in Aquatic Systems with Unstable Water Chemistries

The present study accessed the use of diffusive gradients in thin film (DGT) as a surrogate for estimating the bioavailability and bioaccumulation of copper (Cu) and zinc (Zn) in a freshwater mussel. We coupled DGTs with mussels and deployed them in a constructed wetland. Water quality parameters were measured for a 4-d period on 3 continuous occasions during 12-d trials in the summer and winter; metal speciation was modeled for each occasion. Higher cumulative rainfall and water turbidity during the summer trial resulted in higher particulate metal concentrations compared to the winter trial. Mussel accumulated metals did not correlate with DGT-measured metals but positively correlated with particulate metals in the summer because filtering particulate food mainly contributed to the bioaccumulation. In contrast, the winter trial suggested a positive correlation between metal bioaccumulation and DGT-measured metals because uptake of dissolved organic matter (DOM) from water mainly contributed to the bioaccumulation, and the labile metal species complexed with DOM generally overlapped with DGT-targeted metals. Though Cu has a higher affinity for organic ligands than Zn, the interactions between Cu and Zn in the mixture did not impede their uptake and bioaccumulation. The deployment duration when DGTs and mussels are coupled to compare metal bioavailability should be no less than 12 d so that mussels have enough time to accumulate contaminants from the environmental media. In summary, DGT is a convenient surrogate for biomonitoring, but it may not fit the real environment such as the aquatic system with unstable water chemistries. Geochemical modeling is good at calculating metal speciation but inferior to DGT in predicting bioavailability and mimicking bioaccumulation. Environ Toxicol Chem 2020;39:2485-2495. © 2020 SETAC.

Is Long-Term Heavy Metal Exposure Driving Carriage of Antibiotic Resistance in Environmental Opportunistic Pathogens: A Comprehensive Phenomic and Genomic Assessment Using Serratia sp. SRS-8-S-2018

The carriage of both, heavy metal and antibiotic resistance appears to be a common trait in bacterial communities native to long-term contaminated habitats, including the Savannah River Site (SRS). There is widespread soil contamination at the SRS; a United States Department of Energy (DOE) facility with long-term contamination from past industrial and nuclear weapons production activities. To further evaluate the genomic and metabolic traits that underpin metal and antibiotic resistance, a robust mercury (Hg) and uranium (U)-resistant strain- SRS-8-S-2018, was isolated. Minimum inhibitory concentration of this strain revealed resistance to Hg (10 μg/ml) and U (5 mM), the two main heavy metal contaminants at the SRS. Metabolic assessment of strain SRS-8-S-2018 using Biolog metabolic fingerprinting analysis revealed preference for carbohydrate utilization followed by polymers, amino acids, carboxy acids, and esters; this physiological activity diminished when Hg stress was provided at 1 and 3 μg/ml and completely ceased at 5 μg/ml Hg, indicating that continued release of Hg will have negative metabolic impacts to even those microorganisms that possess high resistance ability. Development of antibiotic resistance in strain SRS-8-S-2018 was evaluated at a functional level using phenomics, which confirmed broad resistance against 70.8% of the 48 antibiotics tested. Evolutionary and adaptive traits of strain SRS-8-S-2018 were further assessed using genomics, which revealed the strain to taxonomically affiliate with Serratia marcescens species, possessing a genome size of 5,323,630 bp, 5,261 proteins (CDS), 55 genes for transfer RNA (tRNA), and an average G + C content of 59.48. Comparative genomics with closest taxonomic relatives revealed 360 distinct genes in SRS-8-S-2018, with multiple functions related to both, antibiotic and heavy metal resistance, which likely facilitates the strain’s survival in a metalliferous soil habitat. Comparisons drawn between the environmentally isolated Serratia SRS-8-S-2018 with 31 other strains revealed a closer functional association with medically relevant isolates suggesting that propensity of environmental Serratia isolates in acquiring virulence traits, as a function of long-term exposure to heavy metals, which is facilitating development, recruitment and proliferation of not only metal resistant genes (MRGs) but antibiotic resistant genes (ARGs), which can potentially trigger future bacterial pathogen outbreaks emanating from contaminated environmental habitats.

Characterization of Bacterial and Fungal Assemblages From Historically Contaminated Metalliferous Soils Using Metagenomics Coupled With Diffusion Chambers and Microbial Traps

The majority of environmental microbiomes are not amenable to cultivation under standard laboratory growth conditions and hence remain uncharacterized. For environmental applications, such as bioremediation, it is necessary to isolate microbes performing the desired function, which may not necessarily be the fast growing or the copiotroph microbiota. Toward this end, cultivation and isolation of microbial strains using diffusion chambers (DC) and/or microbial traps (MT) have both been recently demonstrated to be effective strategies because microbial enrichment is facilitated by soil nutrients and not by synthetically defined media, thus simulating their native habitat. In this study, DC/MT chambers were established using soils collected from two US Department of Energy (DOE) sites with long-term history of heavy metal contamination, including mercury (Hg). To characterize the contamination levels and nutrient status, soils were first analyzed for total mercury (THg), methylmercury (MeHg), total carbon (TC), total nitrogen (TN), and total phosphorus (TP). Multivariate statistical analysis on these measurements facilitated binning of soils under high, medium and low levels of contamination. Bacterial and fungal microbiomes that developed within the DC and MT chambers were evaluated using comparative metagenomics, revealing Chthoniobacter, Burkholderia and Bradyrhizobium spp., as the predominant bacteria while Penicillium, Thielavia, and Trichoderma predominated among fungi. Many of these core microbiomes were also retrieved as axenic isolates. Furthermore, canonical correspondence analysis (CCA) of biogeochemical measurements, metal concentrations and bacterial communities revealed a positive correlation of Chthoniobacter/Bradyrhizobium spp., to THg whereas Burkholderia spp., correlated with MeHg. Penicillium spp., correlated with THg whereas Trichoderma spp., and Aspergillus spp., correlated with MeHg, from the MT approach. This is the first metagenomics-based assessment, isolation and characterization of soil-borne bacterial and fungal communities colonizing the diffusion chambers (DC) and microbial traps (MT) established with long-term metal contaminated soils. Overall, this study provides proof-of-concept for the successful application of DC/MT based assessment of mercury resistant (HgR) microbiomes in legacy metal-contaminated soils, having complex contamination issues. Overall, this study brings out the significance of microbial communities and their relevance in context to heavy metal cycling for better stewardship and restoration of such historically contaminated systems.

Legacy Contaminants in Aquatic Biota in a Stream Associated with Nuclear Weapons Material Production on the Savannah River Site

Former nuclear weapons material production at the U.S. Department of Energy's Savannah River Site (SRS) has resulted in contamination of certain terrestrial and aquatic ecosystems on site with legacy wastes such as radiocesium (¹³⁷Cs), tritium (³H), and metals. We collected fish and invertebrates from five beaver ponds (sites) above, adjacent, and downgradient of three SRS facilities (H-, F-, and C-Areas) to evaluate whether the accumulation of metals and radionuclides in biota were associated with specific facility operations and if the measured levels could pose risks to aquatic organisms. We compared concentrations of various metals, ¹³⁷Cs, and ³H in fish, as well as in water (³H only), among sites along the stream gradient. Fish collected from sites adjacent to H-Area had significantly higher ¹³⁷Cs concentrations compared to fish from other sites. Both biota and water samples indicated significantly greater levels of ³H in sites adjacent to and downstream of C-Area. Concentrations of zinc (Zn), copper (Cu), and mercury (Hg) in some samples exceeded effects levels reported for fish and may pose a risk to fish populations. This study reported fish tissue concentrations of ¹³⁷Cs and ³H, which have not been documented extensively in ecotoxicological studies. Our results suggested that industrial operations such as nuclear material production at SRS could have long-lasting impact on the aquatic ecosystem via the release of radionuclides and metals, and long-term monitoring of physiological effects and population level impact in biota exposed to these contaminants are recommended.

Mercury accumulation in freshwater and marine fish from the wild and from aquaculture ponds

We analysed the total mercury (Hg) accumulation in bodies and gut contents of 13 species of marine wild fish, 7 species of wild freshwater fish and 4 species of farmed fish. In addition, metal concentrations were recorded in water, sediment, fish prey and fodder materials, to track the dynamics of bio-accumulation. Cultured freshwater fish were collected at four Austrian farms and compared with samples obtained from markets. Wild marine fish were collected at Santa Croce bank, in Italy (Mediterranean Sea). Metal accumulation varied with sampling site, species, and age (or weight) of fish. Wild marine fish exhibited higher levels than wild freshwater fish, which in turn had higher Hg levels than cultured freshwater fish. Mercury increased according to trophic levels of consumers. Total Hg contents in muscle of cultured and wild freshwater fish sampled in 2006-2008 did not exceed legal nutritional limits. Similarly, in market samples of trout and carp collected in 2019, we found low or undetectable concentrations of total Hg in muscle tissue. In contrast, some marine fish (both market samples and some species from coastal waters) exceeded the legal limits. Environmental contamination, food webs and biological factors are the main causes of Hg accumulation in fish. Our results reflect the actual differences between specific European sites and should not be generalized. However, they support the generally increasing demand for monitoring mercury pollution in view of its impact on human health and its value as an indicator of ecosystem contamination.