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Landschoot S, Zustovi R, Dewitte K, Randall NP, Maenhout S, Haesaert G. Cereal-legume intercropping: a smart review using topic modelling. FRONTIERS IN PLANT SCIENCE 2024; 14:1228850. [PMID: 38259927 PMCID: PMC10800527 DOI: 10.3389/fpls.2023.1228850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 12/12/2023] [Indexed: 01/24/2024]
Abstract
Introduction Over the last decade, there has been a growing interest in cereal-legume intercropping for sustainable agriculture. As a result numerous papers, including reviews, focus on this topic. Screening this large amount of papers, to identify knowledge gaps and future research opportunities, manually, would be a complex and time consuming task. Materials and methods Bibliometric analysis combined with text mining and topic modelling, to automatically find topics and to derive a representation of intercropping papers as a potential solution to reduce the workload was tested. Both common (e.g. wheat and soybean) as well as underutilized crops (e.g. buckwheat, lupin, triticale) were the focus of this study. The corpus used for the analysis was retrieved from Web of Science and Scopus on 5th September 2022 and consisted of 4,732 papers. Results The number of papers on cereal-legume intercropping increased in recent years, with most studies being located in China. Literature mainly dealt with the cereals maize and wheat and the legume soybean whereas buckwheat and lupin received little attention from academic researchers. These underutilized crops are certainly interesting to be used as intercropping partners, however, additional research on optimization of management and cultivar's choice is important. Yield and nitrogen fixation are the most commonly studied traits in cereal-legume intercropping. Last decade, there is an increasing interest in climate resilience, sustainability and biodiversity. Also the term "ecosystem services" came into play, but still with a low frequency. The regulating services and provisioning services seem to be the most studied, in contrast terms related to potential cultural services were not encountered. Discussion In conclusion, based on this review several research opportunities were identified. Minor crops like lupin and buckwheat need to be evaluated for their role as intercropping partners. The interaction between species based on e.g. root exudates needs to be further unraveled. Also diseases, pests and weeds in relation to intercropping deserve more attention and finally more in-depth research on the additional benefits/ecosystem services associated with intercropping systems is necessary.
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Affiliation(s)
- Sofie Landschoot
- Department of Plants and Crops, Faculty of BioScience Engineering, Ghent University, Ghent, Belgium
| | - Riccardo Zustovi
- Department of Plants and Crops, Faculty of BioScience Engineering, Ghent University, Ghent, Belgium
| | - Kevin Dewitte
- Department of Plants and Crops, Faculty of BioScience Engineering, Ghent University, Ghent, Belgium
| | - Nicola P. Randall
- Centre for Evidence-Based Agriculture, Harper Adams University, Newport, United Kingdom
| | - Steven Maenhout
- Department of Plants and Crops, Faculty of BioScience Engineering, Ghent University, Ghent, Belgium
| | - Geert Haesaert
- Department of Plants and Crops, Faculty of BioScience Engineering, Ghent University, Ghent, Belgium
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Zhang CJ, Gao Y, Yu J, Lin Z, Chen M, Min X, Yan X, Kim DS. The key determinant for forming pollen density and using crop barriers to mitigate wind-blown pollen dispersal in alfalfa (Medicago sativa L.). THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167748. [PMID: 37838052 DOI: 10.1016/j.scitotenv.2023.167748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 10/09/2023] [Accepted: 10/09/2023] [Indexed: 10/16/2023]
Abstract
The potential for commercial cultivation of genetically engineered (GE) alfalfa has raised ecological concerns due to the possibility of introgression of GE alleles into conventional populations. The main objectives of this study were to determine the key affecting factors (i.e. size of pollen source, number of pollinating bees) on forming alfalfa pollen cloud density and test the mitigating effect using maize barrier rows on alfalfa pollen dispersal. The results showed that the mean pollen densities of alfalfa pollen source (Ø = 10 or 20 m) were statistically similar when treated with the same number of worker bumblebees and increased accordingly with increasing the worker bees (887 and 853 pollens m-3 h-1 for Ø = 10 and 20 m with 100-150 worker bees, respectively; 1040 and 1070 pollens m-3 h-1 for the two plots with 200-300 worker bees, respectively), demonstrating that the number of worker bees but not the size of the pollen source was the key determinant for forming alfalfa pollen density. A maize barrier row established at 0.5 m from the alfalfa edge consistently decreased downwind pollen densities (percent pollen density of pollen source) to 0.2-4.4 % at 1-9 m compared to 3.4-25.4 % and 7.5-37.8 % at the same distance range for the upwind and downwind sites without maize barrier rows, respectively. Based on the pods formed on the emasculated alfalfa flowers (due to pollen dispersal) located at various distances from the pollen source and subsequent prediction model, the pollen density threshold value for fertilizing alfalfa recipient under the wind-blown condition was determined of 65.8 pollens m-3 h-1 at 14.7 m from the pollen source edge. The results would help in understanding the pollination biology (minimum pollen density for fertilizing alfalfa recipient ovule) and the process of pollen-mediated gene flow and helpful in developing management strategies to reduce the pollen density and thus mitigate the gene flow in alfalfa.
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Affiliation(s)
- Chuan-Jie Zhang
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China; Joint International Research Laboratory of Agriculture and Agri-Product Safety, the Ministry of Education of China, Yangzhou University, Yangzhou, Jiangsu Province 225009, China.
| | - Yang Gao
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China
| | - Jialin Yu
- Peking University Institute of Advanced Agricultural Science, Weifang, Shandong 261325, China
| | - Zheguang Lin
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China
| | - Min Chen
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China
| | - Xueyang Min
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China
| | - Xuebing Yan
- College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu Province 225009, China
| | - Do-Soon Kim
- Department of Agriculture, Forestry, and Bioresources, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea
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Liu XZ, Guo H, Long GJ, Ma YF, Gong LL, Zhang MQ, Hull JJ, Dewer Y, Liu LW, He M, He P. Functional characterization of five developmental signaling network genes in the white-backed planthopper: Potential application for pest management. PEST MANAGEMENT SCIENCE 2023. [PMID: 36942746 DOI: 10.1002/ps.7464] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 02/14/2023] [Accepted: 03/19/2023] [Indexed: 06/18/2023]
Abstract
BACKGROUND The white-backed planthopper (WBPH, Sogatella furcifera) is a major rice pest that exhibits condition dependent wing dimorphisms - a macropterous (long wing) form and a brachypterous (short wing) form. Although, the gene cascade that regulates wing development and dimorphic differentiation has been largely defined, the utility of these genes as targets for pest control has yet to be fully explored. RESULTS Five genes typically associated with the developmental signaling network, armadillo (arm), apterous A (apA), scalloped (sd), dachs (d), and yorkie (yki) were identified from the WBPH genome and their roles in wing development assessed following RNA interference (RNAi)-mediated knockdown. At 5 days-post injection, transcript levels for all five targets were substantially decreased compared with the dsGFP control group. Among the treatment groups, those injected with dsSfarm had the most pronounced effects on transcript reduction, mortality (95 ± 3%), and incidence (45 ± 3%) of wing deformities, whereas those injected with dsSfyki had the lowest incidence (6.7 ± 4%). To assess the utility of topical RNAi for Sfarm, we used a spray-based approach that complexed a large-scale, bacteria-based double-stranded RNA (dsRNA) expression pipeline with star polycation (SPc) nanoparticles. Rice seedlings infested with third and fourth instar nymphs were sprayed with SPc-dsRNA formulations and RNAi phenotypic effects were assessed over time. At 2 days post-spray, Sfarm transcript levels decreased by 86 ± 9.5% compared with dsGFP groups, and the subsequent incidences of mortality and wing defects were elevated in the treatment group. CONCLUSIONS This study characterized five genes in the WBPH developmental signaling cascade, assessed their impact on survival and wing development via RNAi, and developed a nanoparticle-dsRNA spray approach for potential field control of WBPH. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Xuan-Zheng Liu
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Huan Guo
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Gui-Jun Long
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Yun-Feng Ma
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Lang-Lang Gong
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Meng-Qi Zhang
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - J Joe Hull
- Pest Management and Biocontrol Research Unit, US Arid Land Agricultural Research Center, USDA Agricultural Research Services, Maricopa, Arizona, USA
| | - Youssef Dewer
- Phytotoxicity Research Department, Central Agricultural Pesticide Laboratory, Agricultural Research Center, Dokki, Giza, Egypt
| | - Li-Wei Liu
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Ming He
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
| | - Peng He
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemicals of Guizhou University, Guiyan, People's Republic of China
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Wyckhuys KA, Zhang W, Colmenarez YC, Simelton E, Sander BO, Lu Y. Tritrophic defenses as a central pivot of low-emission, pest-suppressive farming systems. CURRENT OPINION IN ENVIRONMENTAL SUSTAINABILITY 2022; 58:101208. [PMID: 36320406 PMCID: PMC9611972 DOI: 10.1016/j.cosust.2022.101208] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
The ongoing COVID-19 pandemic has spotlighted the intricate connections between human and planetary health. Given that pesticide-centered crop protection degrades ecological resilience and (in-)directly harms human health, the adoption of ecologically sound, biodiversity-driven alternatives is imperative. In this Synthesis paper, we illuminate how ecological forces can be manipulated to bolster 'tritrophic defenses' against crop pests, pathogens, and weeds. Three distinct, yet mutually compatible approaches (habitat-mediated, breeding-dependent, and epigenetic tactics) can be deployed at different organizational levels, that is, from an individual seed to entire farming landscapes. Biodiversity can be harnessed for crop protection through ecological infrastructures, diversification tactics, and reconstituted soil health. Crop diversification is ideally guided by interorganismal interplay and plant-soil feedbacks, entailing resistant cultivars, rotation schemes, or multicrop arrangements. Rewarding opportunities also exist to prime plants for enhanced immunity or indirect defenses. As tritrophic defenses spawn multiple societal cobenefits, they could become core features of healthy, climate-resilient, and low-carbon food systems.
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Affiliation(s)
- Kris Ag Wyckhuys
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- University of Queensland, Brisbane, Australia
- Fujian Agriculture and Forestry University, Fuzhou, China
- Chrysalis Consulting, Hanoi, Viet Nam
| | - Wei Zhang
- International Food Policy Research Institute (IFPRI-CGIAR), Washington DC, USA
| | | | | | - Bjorn O Sander
- International Rice Research Institute (IRRI-CGIAR), Hanoi, Viet Nam
| | - Yanhui Lu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
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Zhang YH, Ma ZZ, Zhou H, Chao ZJ, Yan S, Shen J. Nanocarrier-delivered dsRNA suppresses wing development of green peach aphids. INSECT SCIENCE 2022; 29:669-682. [PMID: 34288425 DOI: 10.1111/1744-7917.12953] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 07/06/2021] [Accepted: 07/08/2021] [Indexed: 05/21/2023]
Abstract
RNA interference (RNAi) has developed rapidly as a potential "green" pest management strategy. At present, most studies have focused on the screening of aphid lethal genes, whereas only a few studies have been conducted on wing development, which is crucial for aphid migration and plant-virus dissemination. Here, the Myzus persicae genes vestigial (vg) and Ultrabithorax (Ubx) related to wing development, were cloned. These two genes were expressed in various tissues of 3rd-instar winged aphids. The mRNA level of vg was high in 3rd-instar nymphs, whereas the expression level of Ubx was high in adults. The nanocarrier-mediated delivery system delivered double-stranded RNAs for aphid RNAi using topical and root applications. The expression levels of vg and Ubx were downregulated by 44.0% and 36.5%, respectively, using the topical application. The simultaneous RNAi of the two target genes caused 63.3% and 32.2% wing aberration rates using topical and root applications, respectively. The current study provided a promising method for controlling aphid migration to alleviate the spread of insect transmitted plant diseases.
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Affiliation(s)
- Yun-Hui Zhang
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Zhong-Zheng Ma
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Hang Zhou
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Zi-Jian Chao
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Shuo Yan
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Jie Shen
- Department of Plant Biosecurity and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
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Yan S, Ren BY, Shen J. Nanoparticle-mediated double-stranded RNA delivery system: A promising approach for sustainable pest management. INSECT SCIENCE 2021; 28:21-34. [PMID: 32478473 DOI: 10.1111/1744-7917.12822] [Citation(s) in RCA: 87] [Impact Index Per Article: 29.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Revised: 04/02/2020] [Accepted: 05/13/2020] [Indexed: 05/10/2023]
Abstract
RNA interference (RNAi) targeting lethal genes in insects has great potential for sustainable crop protection. Compared with traditional double-stranded (ds)RNA delivery systems, nanoparticles such as chitosan, liposomes, and cationic dendrimers offer advantages in delivering dsRNA/small interfering (si)RNA to improve RNAi efficiency, thus promoting the development and practice of RNAi-based pest management strategies. Here, we illustrate the limitations of traditional dsRNA delivery systems, reveal the mechanism of nanoparticle-mediated RNAi, summarize the recent progress and successful applications of nanoparticle-mediated RNAi in pest management, and finally address the prospects of nanoparticle-based RNA pesticides.
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Affiliation(s)
- Shuo Yan
- Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Bin-Yuan Ren
- National Agricultural Technology Extension and Service Center, Beijing, China
| | - Jie Shen
- Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
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Ma ZZ, Zhou H, Wei YL, Yan S, Shen J. A novel plasmid-Escherichia coli system produces large batch dsRNAs for insect gene silencing. PEST MANAGEMENT SCIENCE 2020; 76:2505-2512. [PMID: 32077251 DOI: 10.1002/ps.5792] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Revised: 02/13/2020] [Accepted: 02/20/2020] [Indexed: 06/10/2023]
Abstract
BACKGROUND RNA interference (RNAi)-based pest management requires efficient delivery and large-batch production of double-stranded (ds)RNA. We previously developed a nanocarrier-mediated dsRNA delivery system that could penetrate an insect's body and efficiently silence gene expression. However, there is a great need to improve the plasmid-Escherichia coli system for the mass production of dsRNA. Here, for efficient dsRNA production, we removed the rnc gene encoding endoribonuclease RNase III in E. coli BL21(DE3) and matched with the RNAi expression vector containing a single T7 promoter. RESULTS The novel pET28-BL21(DE3) RNase III-system was successfully constructed to express vestigial (vg)-dsRNA against Harmonia axyridis. dsRNA was extracted and purified from cell cultures in four E. coil systems, and the yields of dsRNA in pET28-BL21(DE3) RNase III-, pET28-HT115(DE3), L4440-BL21(DE3) RNase III- and L4440-HT115(DE3) were 4.23, 2.75, 0.88 and 1.30 μg mL-1 respectively. The dsRNA expression efficiency of our novel E. coil system was three times that of L4440-HT115(DE3), a widely used dsRNA production system. The RNAi efficiency of dsRNA produced by our system and by biochemical synthesis was comparable when injected into Harmonia axyridis. CONCLUSION Our system expressed dsRNA more efficiently than the widely used L4440-HT115(DE3) system, and the produced dsRNA showed a high gene-silencing effect. Notably, our pET28-BL21(DE3) RNase III-system provides a novel method for the mass production of dsRNA at low cost and high efficiency, which may promote gene function analysis and RNAi-based pest management. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Zhong-Zheng Ma
- Department of Entomology, MOA Key Lab of pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Hang Zhou
- Department of Entomology, MOA Key Lab of pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Yan-Long Wei
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China
| | - Shuo Yan
- Department of Entomology, MOA Key Lab of pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Jie Shen
- Department of Entomology, MOA Key Lab of pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
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Abstract
The application of RNAi promotes the development of novel approaches toward plant protection in a sustainable way. Genetically modified crops expressing dsRNA have been developed as commercial products with great potential in insect pest management. Alternatively, some nontransformative approaches, including foliar spray, irrigation and trunk injection, are favorable in actual utilization. In this review, we summarize the recent progress and successful cases of RNAi-based pest management strategy, explore essential implications and possibilities to improve RNAi efficiency by delivery of dsRNA through transformative and nontransformative approaches, and highlight the remaining challenges and important issues related to the application of this technology.
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