Long-term fate of rapidly eroding carbon stock soil profiles in coastal wetlands

Vermicompost: In situ retardant of antibiotic resistome accumulation in cropland soils

The dissemination of antibiotic resistance genes (ARGs) in soil has become a global environmental issue. Vermicomposting is gaining prominence in agricultural practices as a soil amendment to improve soil quality. However, its impact on soil ARGs remains unclear when it occurs in farmland. We comprehensively explored the evolution and fate of ARGs and their hosts in the field soil profiles under vermicompost application for more than 3 years. Vermicompost application increased several ARG loads in soil environment but decreased the high-risk bla-ARGs (blaampC, blaNDM, and blaGES-1) by log(0.04 - 0.43). ARGs in soil amended with vermicompost primarily occurred in topsoil (approximately 1.04-fold of unfertilized soil), but it is worth noting that their levels in the 40-60 cm soil layer were the same or even less than in the unfertilized soil. The microbial community structure changed in soil profiles after vermicompost application. Vermicompost application altered the microbial community structure in soil profiles, showing that the dominant bacteria (i.e., Proteobacteria, Actinobacteriota, Firmicutes) were decreased 2.62%-5.48% with the increase of soil depth. A network analysis further revealed that most of ARG dominant host bacteria did not migrate from surface soil to deep soil. In particular, those host bacteria harboring high-risk bla-ARGs were primarily concentrated in the surface soil. This study highlights a lower risk of the propagation of ARGs caused by vermicompost application and provides a novel approach to reduce and relieve the dissemination of ARGs derived from animals in agricultural production.

Impact of freshwater river reconnection on porewater salinity and ammonium availability in coastal brackish marsh soils

Restoring freshwater flows to wetland ecosystems is an increasingly common tool for reversing saltwater intrusion/chronic salinization. Hydrologic restoration projects can deliver large volumes of sediment and fresh water to coastal basins, episodically exposing brackish and salt marsh vegetated soils to low surface water salinities. Yet little is known about the impacts of river reconnection/diversions to porewater salinity of the active root zone (0-30 cm) and salinity dependent soil biogeochemical processes like sorption. Intact soil cores from a brackish marsh site in mid-Barataria Basin, LA were subjected to a simulated river diversion opening to examine how porewater salinity and ammonium (NH4+) availability change with depth and time. Quadruplicate soil cores were inundated with continuously flowing fresh (0 salinity) water for 0, 7, or 28 d then measured for porewater salinity and NH4+ partition coefficient (exchangeable NH4+:porewater NH4+) every 2 cm for the top 10 cm of soil. Porewater salinity decreased in the 0-4 cm interval between 0 and 7 d of the simulated river diversion and increased in the 8-10 cm interval between 7 and 28 d. Overall, depth-averaged porewater salinity of the top 10 cm did not significantly change between 0 and 28 d of the simulated river diversion. Ammonium partition coefficients increased only in the 0-2 cm interval between 0 and 7 d of the simulated river diversion, likely due to freshening-induced NH4+ adsorption. These results indicate that the physicochemical environment of brackish marsh soils is relatively resistant to a single surface water freshening over one month. Models utilized by the state of Louisiana may be overpredicting freshening of the marsh soil porewater in Mid-Barataria Basin in response to the episodic operation of the Mid-Barataria Sediment Diversion. This study demonstrates the importance of measuring diffusive-adsorptive flux of major cations and anions when modeling vertical salt transfer in brackish marsh soils.

Coastal degradation regulates the availability and diffusion kinetics of phosphorus at the sediment-water interface: Mechanisms and environmental implications

Coastal wetlands have experienced considerable loss and degradation globally. However, how coastal degradation regulates sediment phosphorus (P) transformation and its underlying mechanisms remain largely unknown in subtropical coastal ecosystems. This study conducted seasonal field measurements using high-resolution diffusive gradient in thin films (DGT) and dialysis (Peeper) techniques, as well as a DGT-induced fluxes in sediments (DIFS) model, to evaluate the mobilization and diffusion of P along a degradation gradient ranging from pristine wetlands to moderately and severely degraded sites. We observed that sediment P is diminished by coastal degradation, and severely degraded sites exhibit a decline in the concentration of available P, despite the presence of distinct seasonal patterns. High-resolution data based on DGT/Peeper analysis revealed that labile P and soluble reactive P (SRP) concentrations varied from 0.0006 mg L-1 to 0.084 mg L-1 (mean 0.0147 mg L-1) and from 0.0128 mg L-1 to 0.1677 mg L-1 (mean 0.0536 mg L-1), respectively. Coastal degradation had a substantial impact on increasing SRP and labile P concentrations, particularly at severely degraded sites. Although severely degraded wetlands appeared to be P sinks (negative P flux at these sites), we did also observe positive diffusive flux in October, indicating that coastal degradation may accelerate the diffusion and remobilization of sediment P into overlying water. The simulations of the DIFS model provided compelling proof of the high resupply capacity of sediment P at severely degraded sites, as supported by the increased R and k-1 values but decreased Tc values. Taken together, these results suggest coastal degradation reduces the sediment P pool, primarily attributed to the strong remobilization of P from the sediment to porewater and overlying water by enhancing the resupply capability and diffusion kinetics. This acceleration induces nutrient loss which adversely impacts the water quality of the surrounding ecosystem. To reduce the adverse effects of coastal degradation, it is essential to adopt a combination of conservation, restoration, and management efforts designed to mitigate the risk of internal P loading and release, and ultimately maintain a regional nutrient balance.

Blue carbon benefits from global saltmarsh restoration

Coastal saltmarshes are found globally, yet are 25%-50% reduced compared with their historical cover. Restoration is incentivised by the promise that marshes are efficient storers of 'blue' carbon, although the claim lacks substantiation across global contexts. We synthesised data from 431 studies to quantify the benefits of saltmarsh restoration to carbon accumulation and greenhouse gas uptake. The results showed global marshes store approximately 1.41-2.44 Pg carbon. Restored marshes had very low greenhouse gas (GHG) fluxes and rapid carbon accumulation, resulting in a mean net accumulation rate of 64.70 t CO2 e ha-1 year-1 . Using this estimate and potential restoration rates, we find saltmarsh regeneration could result in 12.93-207.03 Mt CO2 e accumulation per year, offsetting the equivalent of up to 0.51% global energy-related CO2 emissions-a substantial amount, considering marshes represent <1% of Earth's surface. Carbon accumulation rates and GHG fluxes varied contextually with temperature, rainfall and dominant vegetation, with the eastern coasts of the USA and Australia particular hotspots for carbon storage. While the study reveals paucity of data for some variables and continents, suggesting need for further research, the potential for saltmarsh restoration to offset carbon emissions is clear. The ability to facilitate natural carbon accumulation by saltmarshes now rests principally on the action of the management-policy community and on financial opportunities for supporting restoration.

Tidal dynamics regulates potential coupling of carbon‑nitrogen‑sulfur cycling microbes in intertidal flats

Tide-driven hydrodynamic process causes significant geochemical gradients that influence biogeochemical cycling and ecological functioning of estuarine and coastal ecosystems. However, the effects of tidal dynamics on microbial communities, particularly at the functional gene level, remain unclear even though microorganisms play critical roles in biogeochemical carbon (C), nitrogen (N) and sulfur (S) cycling. Here, we used 16S rRNA gene amplicon sequencing and microarray-based approach to reveal the stratification of microorganisms related to C, N and S cycles along vertical redox gradients in intertidal wetlands. Alpha-diversity of bacteria and archaea was generally higher at the deep groundwater-sediment interface. Microbial compositions were markedly altered along the sediment profile, and these shifts were largely due to changes in nutrient availability and redox potential. Furthermore, functional genes exhibited redox partitioning between interfaces and transition layer, with abundant genes involved in C decomposition, methanogenesis, heterotrophic denitrification, sulfite reduction and sulfide oxidation existed in the middle anoxic zone. The influence of tidal dynamics on sediment function was highly associated with redox state, sediment texture, and substrates availability, leading to distinct distribution pattern of metabolic coupling of microbes involved in energy flux and elemental cycling in intertidal wetlands. These results indicate that tidal cycles are critical in determining microbial community and functional structure, and they provide new insights into sediment microbe-mediated biogeochemical cycling in intertidal habitats.

Linking soil phosphorus availability and phosphatase functional genes to coastal marsh erosion: Implications for nutrient cycling and wetland restoration

Accelerated marsh erosion caused by climate change and human activity may have important implications for nutrient cycling and availability. However, how erosion affects phosphorus (P) transformation and microbial function in subtropical coastal marshes remains largely unknown. Here we assessed soil P fractions, availability and the phoD-harboring bacterial community along a marsh erosion gradient (non-eroded, lightly eroded, and heavily eroded). We showed that marsh erosion caused a shift in P fractions, leading to a decrease in P availability and a reduction in concentrations of labile P, moderately labile P, and stable P by 20 %, 9 %, and 17 % respectively. The abundance and diversity of phoD phosphatase genes decreased dramatically along the erosion gradient and were lower at heavily eroded sites than at non-eroded sites. Marsh erosion reshaped phoD gene community composition, and Corallococcus, Amycolatopsis, and Phaeobacter were identified as the dominant phoD-harboring microbes. Notably, marsh erosion reduced the complexity and stability of the phoD-harboring bacterial network, and heavily eroded sites have fewer network edges and nodes than non-eroded sites. The dynamics of soil P fractions, availability, and phoD-harboring bacterial communities driven by marsh erosion are largely shaped by substrate availability and soil properties (e.g., nutrients, pH, electrical conductivity, and moisture). Additionally, strong linkages between P availability and the abundance and diversity of phosphatase genes following erosion, suggest that phosphatase drives P mineralization and dissolution, and erosion weakens the regulation of P transformation by reshaping the phoD phosphatase gene community. Our findings indicate that marsh erosion alters soil P fractions and phoD-harboring bacterial communities, which weakens microbial regulation of P transformation and availability, thereby significantly reducing soil P pools and availability. Our findings broaden understanding of the impacts of coastal erosion on nutrient balance and ecosystem function, offering valuable perspectives that could inform wetland restoration and coastal management strategies.

Socio-ecological well-being perspectives of wetland loss scenario: A review

Previous original research focused on wetland loss and finding out its drivers across different regional units of the world. A few reports also tried to account world's condition on wetland loss. A couple of review articles articulated the causes of wetland loss and services. The present study intended to explore the linkage between wetland loss rate and processes concerning socio-ecological well-being parameters to highlight alternative ways to adopt wetland conservation policies. A total of 132 pieces of Scopus index literature were taken analysing loss rate and drivers of loss from 22 sample countries where publication frequency is relatively high. Meta-analysis was done to explain the publication trend and spatial change in publication polarity. Results distinctly revealed that the rate of wetland loss varies from 0.06% to 4.81% annually, with substantially low in developed countries (DC) than in developing (DeV) and least developed countries (LDC). Six drivers, such as agricultural land expansion, the built-up area, the conversion to grassland area, construction of the dam, climate change and tourism, were the primary drivers. But all these are not equally active across the DC, DeV and LDC. Climate change, tourism development in DC, agriculture and built-up expansions in the Dev and LDC appeared as the major causes behind wetland loss. Socio-ecological well-being parameters like human development, environmental performance, social progression, and economic status were found to be significantly negatively (-0.48 to -0.57), and the poverty rate was positively (0.27) associated with the rates of wetland loss. Drivers also varied with respect to the socio-ecological conditions. These findings are not merely added knowledge to the state-of-arts but are also helpful in re-directing global policies toward wetland conservation.

Surface water temperature impacts on coastal wetland denitrification: Implications for river reconnection

Louisiana, located in the southeast United States, is home to 40% of the continental US's coastal wetlands yet accounts for 80% of the nation's coastal wetland loss. This loss is generally attributed to decreased sediment supply, hydrologic alteration from levees, channelization, subsidence, sea-level rise, and wave and tidal induced marsh edge erosion. The Mid-Barataria Sediment Diversion is a US $1.3 billion coastal restoration project that will divert up to 2100 m³ s^-1 of sediment-laden Mississippi River water directly into Barataria Basin. The influx of colder, nutrient-rich, springtime river water could negatively impact water quality of the receiving basin. We quantified the effects of colder, surface water temperature on the nitrate (NO₃^-) reduction rate in vegetated marsh and open water bay sediments. Colder water limited NO₃^- removal processes averaging 17.1 mg N m^-2 d^-1 in the range of 5-14 °C, before increasing almost 3-fold in the 20 °C treatments at 50.6 mg N m^-2 d^-1. Low N removal rates, especially near the project inflow where temperatures will be coldest will favor transport of NO₃^- further into Barataria Basin where eutrophic conditions could become expressed. These results will inform coastal managers around the world of the potential ecosystem response to coastal restoration aimed at river reconnection where colder waters enter warmer, shallow basins.

Manure application: A trigger for vertical accumulation of antibiotic resistance genes in cropland soils

The application of livestock manure increases the dissemination risk of antibiotic resistance genes (ARGs) in farmland soil environment. However, the vertical migration behavior and driving factor of ARGs in manured soil under swine manure application remains undefined. Here, the dynamics of ARGs, mobile genetic elements (MGEs) and bacterial communities in different soil depths (0 - 80 cm) with long-term swine manure application were tracked and conducted using real-time qPCR. Results showed that long-term application of swine manure remarkably facilitated the vertical accumulation of ARGs and MGEs, in particular that the relative abundance of bla_ampC showed significant enrichment with increasing depth. ARGs abundance was similar in the three fields with long-term application of swine manure. (p＞0.05). Procrustes analysis indicated that microbial communities were the dominant drivers of ARGs variation in topsoil, and the changes of environmental factors played a vital role in vertical migration ARGs in cropland soils. Additionally, the variation patterns of high-risk ARGs (i.e., bla_ampC, bla_TEM-1) were influenced by the dominant bacteria (Actinomycetes) and pH. This study illustrated that the swine manure application promoted the vertical migration of ARGs, including multidrug resistance determinants, highlighting the ecological risk caused by long-term manure application.

Research Development, Current Hotspots, and Future Directions of Blue Carbon: A Bibliometric Analysis

The blue carbon ecosystem has a strong capacity for carbon sequestration, but its research progress and development are still unclear. This study used CiteSpace to conduct a visual analysis, based on the analysis of 908 articles retrieved from the Web of Science Core Collection. The results showed that blue carbon research has gone through an early exploratory stage based on the scientific concept research, a research stage on the carbon sequestration process of the diverse blue carbon ecosystems, and a blue carbon protection and restoration stage based on climate change and human activities. The blue carbon theoretical framework has been continuously improved and the subject is currently more focused. The hot research topics are different at different stages. In the early stage, they focused on the types of blue carbon ecosystems and the process of carbon sequestration. Blue carbon research has developed from a single ecosystem type to multiple ecosystem types, and from concept recognition to system assessment research. Recently, research on the response, restoration and protection of blue carbon ecosystems has become a hotspot under the combined effect of human activities and climate change. In the future, it is necessary to strengthen the scientific research on blue carbon, to protect the integrity of the ecosystem structure and service functions, and to make a greater contribution to the global carbon neutrality strategy.

National scale predictions of contemporary and future blue carbon storage

To help mitigate the impacts of climate change, many nature-based solutions are being explored. These solutions involve protection and restoration of ecosystems that serve as efficient carbon sinks, including vegetated coastal ecosystems (VCEs: tidal marshes, mangrove forests, and seagrass meadows) also known as 'Blue Carbon' ecosystems. In fact, many nations are seeking to manage VCEs to help meet their climate change mitigation targets through Nationally Determined Contributions (NDCs). However, incorporation of VCEs into NDCs requires national-scale estimates of contemporary and future blue carbon storage, which has not yet been achieved. Here we address this challenge using machine learning approaches to reliably map (with 62-72% accuracy) soil carbon stocks in VCEs based on geospatial data (topography, geomorphology, climate, and anthropogenic impacts), using Australia as a case study. The resulting maps of soil carbon stocks showed that there is a total of 951 Tg (±65 Tg) of carbon stock within Australian VCEs. Strong relationships between soil carbon stocks and climatic conditions (temperature, rainfall, solar radiation) allowed us to project future changes in carbon storage across all RCP scenarios for the years 2050 and 2090 to determine changes in environmental suitability for soil carbon stocks. Results show that soil carbon stocks in mangrove/tidal marsh ecosystems are likely to predominantly experience declines in carbon stocks under predicted climate change scenarios (19% of ecosystems area is predicted to have an increase in soil carbon stocks, while 38% of ecosystems area is predicted to have a decrease in soil carbon stocks), but a majority of seagrass area is likely to have increased soil carbon stocks (56% increase, 7% decrease). This approach is effective for developing robust national blue carbon inventories and revealing the capacity for blue carbon to help meet NDCs. The resulting spatially-explicit maps can also be used to pinpoint areas for successful blue carbon projects both now and in the future.

Peripheral freshwater deltaic wetlands are hotspots of methane flux in the coastal zone

Methane (CH₄) emissions are low in the coastal zone due to a higher redox poise, related to sulfate reduction. However, river deltas are a potential source of CH₄ flux in coastal zones globally, due to fresh condition and high primary production. The goal of this study was to seasonally measure CH₄flux at three different geomorphic settings (newly forming island, river channel bottom and established freshwater marsh) within the Wax Lake Delta, Louisiana, USA. CH₄ flux rates were 386 ± 327 mg C m^-2 d^-1 in March and 2859 ± 1286 mg C m^-2 d^-1 in June at the freshwater marsh site. At the island site, CH₄ flux was significantly smaller at 7.94 ± 3.57 mg C m^-2 d^-1 in March and 215 ± 153 mg C m^-2 d^-1 in June while at adjacent river channel bottom site, CH₄ flux was lowest at 2.49 ± 3.38 mg C m^-2 d^-1 in March and 19.5 ± 1.12 mg C m^-2 d^-1 in June at the air-water interface. CH₄ emission rates show significant spatial heterogeneity with rates up to two orders of magnitude greater at the marsh site at the periphery of the delta, related to greater soil total C. Therefore regions within the active delta do not provide a significant source of methane, due to a lack of soil C, despite freshwater conditions. However, marshes at the periphery within the halo of fresh water, populated with established plant communities can be significant hotspots of CH₄ emissions, despite their location within the coastal zone.

The role of short-term and long-term water level and wave variability in coastal carbon budgets

We investigated soil organic carbon dynamics at three freshwater coastal sites in the Laurentian Great Lakes using a simple carbon budget box model. Long-term carbon budgets (1939–2018) were developed using aerial photography and then compared to short-term carbon export (2018–2019) developed using drone data. This study puts forth a refined coastal carbon budget model that advances previous model iterations by: (1) examining spatial variability in carbon budgets, (2) including a temporally dynamic carbon inventory term, and (3) updating the erosional term. Half of the initial carbon stock of the combined sites was lost in the 80-year study period, which is severely imbalanced with the age of those coastal habitats (400–2000 cal years BP). Major periods of carbon loss corresponded to periods of elevated water level. Short-term loss of carbon during 2018–2019 corresponded to northeasterly extreme wave events during a period of above-average water level.

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A coastal carbon budget model was refined to account for spatiotemporal heterogeneity

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Half the soil organic carbon stored at the study sites was exported in 80 years

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Carbon loss occurs during decadal periods of water level rise

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High wave events and/or elevated water level cause carbon loss

Investigating the impact of in situ soil organic matter degradation through porewater spectroscopic analyses on marsh edge erosion

Marsh edge erosion results in soil organic matter (SOM) loss from coastal wetlands and is differentially affected by wind waves, soil properties, and vegetation cover. The degradation of SOM may make the marsh edge susceptible to erosion. The objective of this study was to investigate the effect of in situ biogeochemical degradations of SOM on marsh edge erosion using porewater spectroscopic analyses. Edge erosion was monitored at 12 transects in one of the highly eroding coastal basins of Louisiana. A total of 36 cores were collected at different distances from the edge of the marsh. Porewater was extracted and analyzed for dissolved organic carbon (DOC) and spectroscopic indicators. The north and west side had greater erosion rates (102.38 ± 5.2 cm yr^-1) than east and south side (78.47 ± 3.3 cm yr^-1). However, the north and east side had greater DOC and refractory carbon but less microbial activity indicating SOM degradation alone did not correlate to edge erosion. The intersecting trend between erosion rate and SOM degradation among four sides of the island indicates the complex nature of edge erosion drivers. The estuarine bottom indicators suggest the eroded SOM is not reburied but rather degraded and emitted back into the atmosphere as CO₂, potentially contributing to global change. The coastlines projected to experience high sea-level rise in the coming century are vulnerable to losing a large amount of stored carbon in the absence of efficient mitigation measures.