Long-term ecological changes in fishes and macro-invertebrates in the world's warmest coral reefs

Decreases in pH from effluent had a devastating but reversible impact on the coastal plankton communities

An event of releasing untreated effluent caused serious decreases in surface seawater pH from 8.1 to lower than 7.5 in seven years and increased back to prior levels after 15 years. It gives us a rare natural experiment to examine the impacts of decreases in pH on the marine plankton communities (phytoplanktons, zooplanktons, shrimp larvae, crab larvae, fish eggs, and larvae) in the natural environment. Observed decreases in pH had a nonlinear effect ubiquitous on all plankton groups, leading to a reduction of approximately 50 % in their density and abundance compared to the level at pH 8.1. Non-linear responses of planktons implied the existence of specific groups more robust to decreases in pH. As pH bounced back to normal levels, the density and abundance of the plankton communities also recovered, further indicating that the negative impacts of decreases in pH on the marine plankton communities were reversible.

Differential spatio-temporal responses of Red Sea coral reef benthic communities to a mass bleaching event

Understanding how coral reefs respond to disturbances is fundamental to assessing their resistance and resilience, particularly in the context of climate change. Due to the escalating frequency and intensity of coral bleaching events, it is essential to evaluate spatio-temporal responses of coral reef communities to disentangle the mechanisms underlying ecological changes. Here, we used benthic data collected from 59 reefs in the Red Sea over five years (2014-2019), a period that encompasses the 2015/2016 mass bleaching event. Reefs were located within three different geographic regions with different environmental settings: north (Duba; Al Wajh), central (Jeddah; Thuwal), and south (Al Lith; Farasan Banks; Farasan Islands). Coral community responses were region-specific, with communities in the south being more promptly affected than those in the northern and central regions, with hard and soft coral cover dropping drastically in several reefs from around > 40% to < 5% two years after bleaching. Coral bleaching effects were particularly evident in the decrease of cover in branching corals. Overall, we documented a shift towards a dominance of macroalgae, turf algae, and crustose coralline algae (CCA). Using remote sensing data, we analyzed sea surface temperature (SST) regimes at the study sites to infer potential drivers of changes in benthic composition. Both SST and Degree Heating Weeks (DHW) only partially aligned with the responses of benthic communities, highlighting the need for more accurate predictors of coral bleaching in the Red Sea. In times of intense coastal development along Saudi Arabia's Red Sea coast, our study provides crucial baseline information on developments in coral reef community composition, as well as to guide decision-making, namely restoration efforts.

Unveiling the ecological status of the Arabian Gulf's marine ecosystem: Insights from benthic community analysis

This study assessed the ecological health of waters within the Saudi Arabian Exclusive Economic Zone, by utilizing benthic biotic indices with a marine monitoring dataset covering the years 2013 to 2018. This comprehensive evaluation covered a vast expanse, encompassing 67 distinctive sampling locations characterized by a wide range of depth and salinity gradients. The study examined spatial fluctuations in the benthic community and assessed potential correlations with environmental variables, including salinity, depth, sediment texture, total organic carbon, and other relevant factors. The macrobenthic density varied across the study sites, with an average density of 566 ± 120 ind.m-2. The Shannon diversity index ranged from 3.21 and 5.90, with an average of 4.70 ± 0.52. Based on the average AMBI values, all the locations were categorized as either slightly disturbed or undisturbed. Additionally, the M-AMBI analysis indicated that 95.5 % sites were in good or high ecological status.

Coral reefs in the northeastern Saudi Arabian Red Sea are resilient to mass coral mortality events

We conducted an integrated survey combining visual census and baited remote underwater video survey on the coral reefs in the northeastern Red Sea and examined their health by comparing the baseline information from two decades ago. The mean coverage of the corals of all stations was 36 %, including 32 % stony corals and 4.0 % soft corals, significantly higher and lower to previous baseline. Observed high proportion of dead corals indicated the occurrence of the events of mass mortality, and the heating events were the most likely cause. Similar levels of coral coverage compared to two decades ago indicated their resilience to past events with mass coral mortality. Small proportions of macroalgae and sea urchins indicated that they might be controlled by their predators frequently observed in both visual census and underwater video survey. Regular monitoring and careful development plans are needed to safeguard these invaluable reefs.

Inter-annual variability patterns of reef cryptobiota in the central Red Sea across a shelf gradient

The combination of molecular tools, standard surveying techniques, and long-term monitoring programs are relevant to understanding environmental and ecological changes in coral reef communities. Here we studied temporal variability in cryptobenthic coral reef communities across the continental shelf in the central Red Sea spanning 6 years (three sampling periods: 2013-2019) and including the 2015 mass bleaching event. We used a combination of molecular tools (barcoding and metabarcoding) to assess communities on Autonomous Reef Monitoring Structures (ARMS) as a standardized sampling approach. Community composition associated with ARMS for both methodologies (barcoding and metabarcoding) was statistically different across reefs (shelf position) and time periods. The partition of beta diversity showed a higher turnover and lower nestedness between pre-bleaching and post-bleaching samples than between the two post-bleaching periods, revealing a community shift from the bleaching event. However, a slight return to the pre-bleaching community composition was observed in 2019 suggesting a recovery trajectory. Given the predictions of decreasing time between bleaching events, it is concerning that cryptobenthic communities may not fully recover and communities with new characteristics will emerge. We observed a high turnover among reefs for all time periods, implying a homogenization of the cryptobiome did not occur across the cross shelf following the 2015 bleaching event. It is possible that dispersal limitations and the distinct environmental and benthic structures present across the shelf maintained the heterogeneity in communities among reefs. This study has to the best of our knowledge presented for the first time a temporal aspect into the analysis of ARMS cryptobenthic coral reef communities and encompasses a bleaching event. We show that these structures can detect cryptic changes associated with reef degradation and provides support for these being used as long-term monitoring tools.

A critical evaluation of benthic phase shift studies on coral reefs

Coral reef decline has accelerated in the last two decades resulting in substantial research into the phenomenon of 'phase shifts' or 'regime shifts'. However, the conclusions drawn from this research have been varied. Some of this variability may stem from methodological approaches, although the extent to which these factors have shaped our understanding remain largely unexplored. To examine this, we conducted a systematic review of the literature. In doing so, we revealed marked variability in the approaches used for studying phase shifts. Notably, very few studies clearly defined what they meant by phase shifts. Therefore, we developed a clarified definition of phase shifts, which specifically defined persistence and dominance. The applicability of this definition was tested on multi-decadal benthic composition data on the Great Barrier Reef. The number of shifts depended critically on the definition selected, suggesting that this may be a primary reason underpinning the variability in past results.

Essential fish habitats of demersal fish in the western Arabian Gulf

Information about habitats occupied by aquatic organisms while completing critical stages of their lives, called essential fish habitats, is crucial for their sustainability. In this work, we determine essential fish habitats (nursery and spawning grounds) of several fish species inhabiting Saudi territorial waters in the western Arabian Gulf using data from multiple surveys (2013-2016), geostatistics, and indicator species analysis. We built geostatistical maps of spatial distributions of juvenile and mature fish and examined the strength of association of each species to its observed nursery and spawning areas. Fish nursery areas were generally located in nearshore locations while spawning areas were located in offshore waters. The patterns of nursery and spawning grounds were highly varied among species, supporting a hypothesis of habitat-species heterogeneity: different species use different locations as nursery and spawning grounds. This information can be used as a roadmap for future evidence-based spatial planning and ecosystem-based management.