Towards large scale biocrust restoration: Producing an efficient and low-cost inoculum of N-fixing cyanobacteria

Proposed Relationships Between Climate, Biological Soil Crusts, Human Health, and in Arid Ecosystems

Biological soil crusts (or biocrust) are diminutive soil communities with ecological functions disproportionate to their size. These communities are composed of lichens, bryophytes, cyanobacteria, fungi, liverworts, and other microorganisms. Creating stabilizing matrices, these microorganisms interact with soil surface minerals thereby enhancing soil quality by redistributing nutrients and reducing erosion by containment of soil particles. Climatic stressors and anthropogenic disturbances reduce the cover, abundance, and functions of these communities leading to an increase of aeolian dust, invasive plant establishment, reduction of water retention in the environment, and overall poor soil condition. Drylands are the most degraded terrestrial ecosystems on the globe and support a disproportionately large human population. Restoration of biocrust communities in semi-arid and arid ecosystems benefits ecosystem health while decreasing dust emissions. Dust abatement can improve human health directly but also indirectly by reducing pathogenic microbe load circulating in the ambient air. We hypothesize that biocrusts not only reduce pathogen load in the air column but also inhibit the proliferation of certain pathogenic microbes in the soil. We provide a review of mechanisms by which healthy biocrusts in dryland systems may reduce soil-borne pathogens that impact human health. Ecologically sustainable mitigation strategies of biocrust restoration will not only improve soil conditions but could also reduce human exposure to soil-borne pathogens.

Optimizing survival and growth of inoculated biocrust-forming cyanobacteria through native plant-based habitat amelioration

Low restoration success in degraded drylands has promoted research efforts towards recovery of pioneer components of these ecosystems such as biocrusts. Biocrusts can stabilize soils and improve nutrient cycling to assist vegetation establishment, but their natural recovery following a disturbance may be very slow. Soil inoculation with biocrust-forming components such as cyanobacteria is widely spread to foster biocrust formation. However, the growth of induced biocrust can be constrained under field conditions due to the harsh environmental conditions in drylands. Thus, strategies to reduce abiotic stresses have to be explored to improve cyanobacteria survival and growth. In this study, we performed an outdoor experiment to analyze the effect of plant-based ameliorating strategies in combination with cyanobacteria inoculum on biocrust formation and improvement of degraded arid soil properties. These ameliorants consisted of a plant mesh made of Macrochloa tenacissima and a Plantago ovata-based stabilizer. Application of ameliorating treatments improved cyanobacteria growth (higher chlorophyll a content, lower albedo and higher NDVI) compared to the application of cyanobacteria inoculum alone. Inoculated soils showed higher aggregate stability than non-inoculated ones, but the highest soil stability was found in the soils treated with P. ovata and was also significantly increased in the soils covered by the M. tenacissima mesh compared to uncovered soils. Both the mesh and the P. ovata stabilizer increased soil organic carbon content by up to 10% and 172%, respectively, compared to soils without habitat amelioration. Microbial community composition was similar between control and inoculated soils and between the mesh covered and uncovered soils, indicating that neither cyanobacteria inoculation nor the vegetal mesh had negative effects on the native soil community. In contrast, the soil with the P. ovata stabilizer alone displayed a different composition, with up to 95% of the bacteria's relative abundance represented by Firmicutes. This effect needs to be considered when applying this stabilizer to prevent a potential alteration of the indigenous soil microbial community. This study indicates the viability of using plant-based ameliorating strategies to optimize the establishment and growth of cyanobacteria inoculum and maximize their effects on soil properties, thus contributing to advancing in the application of nature-based solutions for the restoration of degraded dryland ecosystems.

Isolation of biocrust cyanobacteria and evaluation of Cu, Pb, and Zn immobilisation potential for soil restoration and sustainable agriculture

Soil contamination by heavy metals represents an important environmental and public health problem of global concern. Biocrust-forming cyanobacteria offer promise for heavy metal immobilisation in contaminated soils due to their unique characteristics, including their ability to grow in contaminated soils and produce exopolysaccharides (EPS). However, limited research has analysed the representativeness of cyanobacteria in metal-contaminated soils. Additionally, there is a lack of studies examining how cyanobacteria adaptation to specific environments can impact their metal-binding capacity. To address this research gap, we conducted a study analysing the bacterial communities of cyanobacteria-dominated biocrusts in a contaminated area from South Sardinia (Italy). Additionally, by using two distinct approaches, we isolated three Nostoc commune strains from cyanobacteria-dominated biocrust and we also evaluated their potential to immobilise heavy metals. The first isolation method involved acclimatizing biocrust samples in liquid medium while, in the second method, biocrust samples were directly seeded onto agar plates. The microbial community analysis revealed Cyanobacteria, Bacteroidota, Proteobacteria, and Actinobacteria as the predominant groups, with cyanobacteria representing between 13.3 % and 26.0 % of the total community. Despite belonging to the same species, these strains exhibited different growth rates (1.1-2.2 g L-1 of biomass) and capacities for EPS production (400-1786 mg L-1). The three strains demonstrated a notable ability for metal immobilisation, removing up to 88.9 % of Cu, 86.2 % of Pb, and 45.3 % of Zn from liquid medium. Cyanobacteria EPS production showed a strong correlation with the removal of Cu, indicating its role in facilitating metal immobilisation. Furthermore, differences in Pb immobilisation (40-86.2 %) suggest possible environmental adaptation mechanisms of the strains. This study highlights the promising application of N. commune strains for metal immobilisation in soils, offering a potential bioremediation tool to combat the adverse effects of soil contamination and promote environmental sustainability.

Plant root mechanisms and their effects on carbon and nutrient accumulation in desert ecosystems under changes in land use and climate

Deserts represent key carbon reservoirs, yet as these systems are threatened this has implications for biodiversity and climate change. This review focuses on how these changes affect desert ecosystems, particularly plant root systems and their impact on carbon and mineral nutrient stocks. Desert plants have diverse root architectures shaped by water acquisition strategies, affecting plant biomass and overall carbon and nutrient stocks. Climate change can disrupt desert plant communities, with droughts impacting both shallow and deep-rooted plants as groundwater levels fluctuate. Vegetation management practices, like grazing, significantly influence plant communities, soil composition, root microorganisms, biomass, and nutrient stocks. Shallow-rooted plants are particularly susceptible to climate change and human interference. To safeguard desert ecosystems, understanding root architecture and deep soil layers is crucial. Implementing strategic management practices such as reducing grazing pressure, maintaining moderate harvesting levels, and adopting moderate fertilization can help preserve plant-soil systems. Employing socio-ecological approaches for community restoration enhances carbon and nutrient retention, limits desert expansion, and reduces CO2 emissions. This review underscores the importance of investigating belowground plant processes and their role in shaping desert landscapes, emphasizing the urgent need for a comprehensive understanding of desert ecosystems.

Enhancement of nitrogen cycling and functional microbial flora by artificial inoculation of biological soil crusts in sandy soils of highway slopes

Biological soil crusts (BSCs) are common in arid and semi-arid ecosystems and enhance soil stability and fertility. Highway slopes severely deplete the soil ecological structure and soil nutrients, hindering plant survival. The construction of highway slope BSCs under human intervention is critical to ensure the long-term stable operation of the slope ecosystem. This study investigated the variation rules and interaction mechanisms between soil nutrients and microbial communities in the subsoil BSCs on highway slopes. Bacterial 16S rRNA high-throughput sequencing was employed to investigate the dynamic compositional changes in the microbial community and perform critical metabolic predictive analyses of functional bacteria. This study revealed that the total soil nitrogen increased significantly from 0.557 to 0.864 g/kg after artificial inoculation with desert Phormidium tenue and Scytonema javanicum. Actinobacteria (44-48%) and Proteobacteria (28-31%) were the dominant phyla in all samples. The abundance of Cyanobacteria, Cytophagaceae, and Chitinophagaceae increased significantly after inoculation. PICRUST analysis showed that the main metabolic pathways of soil microorganisms on highway slopes included cofactor and vitamin, nucleotide, and amino acid metabolisms. These findings suggest that the artificial inoculation with Phormidium tenue and Scytonema javanicum could alter soil microbial distribution to promote soil development on highway slopes toward nutrient accumulation.