Stimulating carbon and nitrogen metabolism of Chlorella pyrenoidosa to treat aquaculture wastewater and produce high-quality protein in plate photobioreactors

Harnessing Artificial Intelligence to Revolutionize Microalgae Biotechnology: Unlocking Sustainable Solutions for High-Value Compounds and Carbon Neutrality

Microalgae offer significant potential in diverse fields, including biofuels, carbon capture, and high-value bioproducts. However, optimizing and scaling microalgae cultivation systems present several challenges due to the dynamic interactions among environmental factors such as light intensity, temperature, pH, nutrient concentration, and CO2 levels, as well as species-specific biological variability. Recent advancements in artificial intelligence (AI), particularly machine learning (ML) and automation, have provided innovative solutions to these challenges. This review explored the role of AI in enhancing microalgae technology, focusing on optimizing cultivation conditions, improving CO2 capture, maximizing biomass production, and automating system processes. Key case studies highlight successful applications of AI in biofuel production, carbon capture projects, and high-value compound manufacturing. Key case studies demonstrate that AI-driven models can increase biomass productivity by up to 15-57%, improve CO2 biofixation efficiency, and enhance lipid and high-value compound yields by more than 20-43% compared to traditional methods. Additionally, we discussed the limitations of current AI models, particularly in data availability and species-specific variability, and suggested future research directions to enhance the integration of AI and microalgae systems. By leveraging AI's potential, microalgae technologies can become more efficient, scalable, and economically viable, addressing global sustainability challenges such as energy production and climate change mitigation.

Effect of salinity on nitrogen removal performance, enzymatic activity and metabolic pathway of Chlorella pyrenoidosa treating aquaculture wastewater

The nitrogen removal performance, enzymatic activity, antioxidant response and metabolic pathway of Chlorella pyrenoidosa (C. pyrenoidosa) under different salinities have been investigated during the treatment of aquaculture wastewater. The growth, chlorophyll content and photosynthetic activity of C. pyrenoidosa were negatively correlated with the salinity from 1% to 3%. The removal performance of chemical oxygen demand (COD) and nitrogen compounds for C. pyrenoidosa decreased with the increase of salinity from 1% to 3%, which was due to the decrease of their corresponding metabolism enzymatic activities. The equilibrium between the reactive oxygen species production and antioxidant defensive system in C. pyrenoidosa was destroyed under high salinity stress and then caused an irreversible damage, which decreased the nitrogen assimilation of C. pyrenoidosa. The metabolic pathway of C. pyrenoidosa under 3% salinity had some obvious variation by comparison with 1% salinity, which led to the discrepancy in the microalgae activity and nitrogen transformation performance. Additionally, high salinity could inhibit the expression of gene associated with the chlorophyll synthesis and damaged the photosystem II reaction center. This study can provide an insight into the effect of salinity on the nitrogen removal from aquaculture wastewater by microalgae.

Protein and lysine improvement harnessed by a signal chain of red light-emitting diode light in Chlorella pyrenoidosa

Microalgae are emerging as a novel single-cell protein source that can substitute traditional plant protein feeds. In this investigation, lysine and protein accumulation in Chlorella pyrenoidosa were significantly enhanced under red light-emitting diode light, addressing challenge of limiting amino acid in plant proteins. The study employed targeted metabolomics, HPLC, and qRT-PCR to validate the light-induced pathway triggering lysine biosynthesis. Specifically, the pathway involves Ca2+-CaM as an intermediary in signal transduction, which directly inhibits PEPC activity. This inhibition directs a significant carbon flux towards central carbon metabolism, resulting in increased pyruvate levels-a critical precursor for lysine biosynthesis via the diaminopimelate pathway. Ultimately, the content of protein and lysine under red light increased by 36.02 % and 99.56 %, respectively, compared to those under white light. These findings provide a novel orientation for the precise regulation of lysine accumulation in microalgae, and moreover lay a solid theoretical foundation for producing microalgal proteins.

Microalgal metabolic engineering facilitates precision nutrition and dietary regulation

Microalgae have gained considerable attention as promising candidates for precision nutrition and dietary regulation due to their versatile metabolic capabilities. This review innovatively applies system metabolic engineering to utilize microalgae for precision nutrition and sustainable diets, encompassing the construction of microalgal cell factories, cell cultivation and practical application of microalgae. Manipulating the metabolic pathways and key metabolites of microalgae through multi-omics analysis and employing advanced metabolic engineering strategies, including ZFNs, TALENs, and the CRISPR/Cas system, enhances the production of valuable bioactive compounds, such as omega-3 fatty acids, antioxidants, and essential amino acids. This work begins by providing an overview of the metabolic diversity of microalgae and their ability to thrive in diverse environmental conditions. It then delves into the principles and strategies of metabolic engineering, emphasizing the genetic modifications employed to optimize microalgal strains for enhanced nutritional content. Enhancing PSY, BKT, and CHYB benefits carotenoid synthesis, whereas boosting ACCase, fatty acid desaturases, and elongases promotes polyunsaturated fatty acid production. Here, advancements in synthetic biology, evolutionary biology and machine learning are discussed, offering insights into the precision and efficiency of metabolic pathway manipulation. Also, this review highlights the potential impact of microalgal precision nutrition on human health and aquaculture. The optimized microalgal strains could serve as sustainable and cost-effective sources of nutrition for both human consumption and aquaculture feed, addressing the growing demand for functional foods and environmentally friendly feed alternatives. The tailored microalgal strains are anticipated to play a crucial role in meeting the nutritional needs of diverse populations and contributing to sustainable food production systems.

Unlocking 3D printing technology for microalgal production and application

Microalgae offer a promising alternative for sustainable nutritional supplements and functional food ingredients and hold potential to meet the growing demand for nutritious and eco-friendly food alternatives. With the escalating impacts of global climate change and increasing human activities, microalgal production must be enhanced by reducing freshwater and land use and minimizing carbon emissions. The advent of 3D printing offers novel opportunities for optimizing microalgae production, though it faces challenges such as high production costs and scalability concerns. This work aims to provide a comprehensive overview of recent advancements in 3D-printed bioreactors for microalgal production, focusing on 3D printing techniques, bio-ink types, and their applications across environmental, food, and medical fields. This review highlights the benefits of 3D-printed bioreactors, including improved mass transfer, optimized light exposure, enhanced biomass yield, and augmented photosynthesis. Current challenges and future directions of 3D printing in microalgal production are also discussed to offer new insights into boosting microalgal cultivation efficiency for expanded applications.

Treatment of agricultural wastewater using microalgae: A review

The rapid development of agriculture has led to a large amount of wastewater, which poses a great threat to environmental safety. Microalgae, with diverse species, nutritional modes and cellular status, can adapt well in agricultural wastewater and absorb nutrients and remove pollutants effectively. Besides, after treatment of agricultural wastewater, the accumulated biomass of microalgae has broad applications, such as fertilizer and animal feed. This paper reviewed the current progresses and further perspectives of microalgae-based agricultural wastewater treatment. The characteristics of agricultural wastewater have been firstly introduced; Then the microalgal strains, cultivation modes, cellular status, contaminant metabolism, cultivation systems and biomass applications of microalgae for wastewater treatment have been summarized; At last, the bottlenecks in the development of the microalgae treatment methods, as well as recommendations for optimizing the adaptability of microalgae to wastewater in terms of wastewater pretreatment, microalgae breeding, and microalgae-bacterial symbiosis systems were discussed. This review would provide references for the future developments of microalgae-based agricultural wastewater treatment.

Investigating cultivation strategies for enhancing protein content in Auxenochlorella pyrenoidosa FACHB-5

This study investigated the influence of yeast extract addition, carbon source, and photoperiod on the growth dynamics of Auxenochlorella pyrenoidosa FACHB-5. Employing response surface methodology, the culture strategy was optimized, resulting in the following optimal conditions: yeast extract addition at 0.75 g L-1, glucose concentration of 0.83 g L-1, and a photoperiod set at Light: Dark = 18 h: 6 h. Under these conditions, the biomass reached 1.76 g L-1 with a protein content of 750.00 g L-1, containing 40 % of essential amino acids, representing a 1.52-fold increase. Proteomic analysis revealed that the targeted cultivation strategy up-regulated genes involved in microalgal protein synthesis. The combined effect of yeast extract and glucose enhanced both the glutamine synthetase-glutamate synthetase mechanism and the free amino acid content.

Phycocyanin from microalgae: A comprehensive review covering microalgal culture, phycocyanin sources and stability

As food safety continues to gain prominence, phycocyanin (PC) is increasingly favored by consumers as a natural blue pigment, which is extracted from microalgae and serves the dual function of promoting health and providing coloration. Spirulina-derived PC demonstrates exceptional stability within temperature ranges below 45 °C and under pH conditions between 5.5 and 6.0. However, its application is limited in scenarios involving high-temperature processing due to its sensitivity to heat and light. This comprehensive review provides insights into the efficient production of PC from microalgae, covers the metabolic engineering of microalgae to increase PC yields and discusses various strategies for enhancing its stability in food applications. In addition to the most widely used Spirulina, some red algae and Thermosynechococcus can serve as good source of PC. The genetic and metabolic manipulation of microalgae strains has shown promise in increasing PC yield and improving its quality. Delivery systems including nanoparticles, hydrogels, emulsions, and microcapsules offer a promising solution to protect and extend the shelf life of PC in food products, ensuring its vibrant color and health-promoting properties are preserved. This review highlights the importance of metabolic engineering, multi-omics applications, and innovative delivery systems in unlocking the full potential of this natural blue pigment in the realm of food applications, provides a complete overview of the entire process from production to commercialization of PC, including the extraction and purification.

A comprehensive review on the heterotrophic production of bioactive compounds by microalgae

Bioactive compounds derived from microalgae have garnered considerable attention as valuable resources for drugs, functional foods, and cosmetics. Among these compounds, photosynthetic pigments and polyunsaturated fatty acids (PUFAs) have gained increasing interest due to their numerous beneficial properties, including anti-oxidant, anti-viral, anti-bacterial, anti-fungal, anti-inflammatory, and anti-tumor effects. Several microalgae species have been identified as rich sources of bioactive compounds, including the Chlorophyceae Dunaliella and Haematococcus, the Bacillariophyta Phaeodactylum and Nitzschia, and the dinoflagellate Crypthecodinium cohnii. However, most of the reported microalgae species primarily grow through autotrophic mechanisms, resulting in low yields and high production costs of bioactive compounds. Consequently, the utilization of heterotrophic microalgae, such as Chromochloris zofingiensis and Nitzschia laevis, has shown significant advantages in the production of astaxanthin and eicosapentaenoic acid (EPA), respectively. These heterotrophic microalgae exhibit superior capabilities in synthesizing target compounds. This comprehensive review provides a thorough examination of the heterotrophic production of bioactive compounds by microalgae. It covers key aspects, including the metabolic pathways involved, the impact of cultivation conditions, and the practical applications of these compounds. The review discusses how heterotrophic cultivation strategies can be optimized to enhance bioactive compound yields, shedding light on the potential of microalgae as a valuable resource for high-value product development.

Synthetic biology in microalgae towards fucoxanthin production for pharmacy and nutraceuticals

Synthetic biology has emerged as a powerful tool for engineering biological systems to produce valuable compounds, including pharmaceuticals and nutraceuticals. Microalgae, in particular, offer a promising platform for the production of bioactive compounds due to their high productivity, low land and water requirements, and ability to perform photosynthesis. Fucoxanthin, a carotenoid pigment found predominantly in brown seaweeds and certain microalgae, has gained significant attention in recent years due to its numerous health benefits, such as antioxidation, antitumor effect and precaution osteoporosis. This review provides an overview of the principles and applications of synthetic biology in the microbial engineering of microalgae for enhanced fucoxanthin production. Firstly, the fucoxanthin bioavailability and metabolism in vivo was introduced for the beneficial roles, followed by the biological functions of anti-oxidant activity, anti-inflammatory activity, antiapoptotic role antidiabetic and antilipemic effects. Secondly, the cultivation condition and strategy were summarized for fucoxanthin improvement with low production costs. Thirdly, the genetic engineering of microalgae, including gene overexpression, knockdown and knockout strategies were discussed for further improving the fucoxanthin production. Then, synthetic biology tools of CRISPR-Cas9 genome editing, transcription activator-like effector nucleases as well as modular assembly and chassis engineering were proposed to precise modification of microalgal genomes to improve fucoxanthin production. Finally, challenges and future perspectives were discussed to realize the industrial production and development of functional foods of fucoxanthin from microalgae.

Extraction, functionality, and applications of Chlorella pyrenoidosa protein/peptide

Chlorella pyrenoidosa (C. pyrenoidosa) has been widely used in commercial food and feed production for numerous years. Its high protein content and cost-effectiveness make it an attractive source of novel protein. With a focus on sustainable development and the search for green natural products, current research is dedicated to maximizing the utilization of C. pyrenoidosa protein (CPP) and peptide. Various techniques, such as the use of ionic liquids, freeze-thawing, ultrasonication, enzyme digest, microwaving are employed in the extraction of CPP. The extracted CPP has demonstrated antioxidant, anti-inflammatory, and bacteriostatic properties. It can also stimulate immune regulation, prevent cardiovascular disease, protect red blood cells, and even be used in wastewater treatment. Furthermore, CPP has shown some potential in combating obesity. Additionally, CPP is being explored in three-dimensional (3D) printing applications, particularly for the creation of biological scaffolds. It is also anticipated to play a role in 3D food printing. This review aimed to supply a comprehensive summary of CPP and C. pyrenoidosa peptide extraction methods, their functions, and practical applications in various industries. By doing so, it seeks to underpin subsequent research efforts, highlight current research limitations, and identify future research directions in this field.

Microplastics perturb nitrogen removal, microbial community and metabolism mechanism in biofilm system

Microplastics (MPs) are a significant component of global pollution and cause widespread concern, particularly in wastewater treatment plants. While understanding the impact of MPs on nutrient removal and potential metabolism in biofilm systems is limited. This work investigated the impact of polystyrene (PS) and polyethylene terephthalate (PET) on the performance of biofilm systems. The results revealed that at concentrations of 100 and 1000 μg/L, both PS and PET had almost no effect on the removal of ammonia nitrogen, phosphorus, and chemical oxygen demand, but reduced the removal of total nitrogen by 7.40-16.6%. PS and PET caused cell and membrane damage, as evidenced by increases in reactive oxygen species and lactate dehydrogenase to 136-355% and 144-207% of the control group. Besides, metagenomic analysis demonstrated both PS and PET changed the microbial structure and caused functional differences. Some important genes in nitrite oxidation (e.g. nxrA), denitrification (e.g. narB, nirABD, norB, and nosZ), and electron production process (e.g. mqo, sdh, and mdh) were restrained, meanwhile, species contribution to nitrogen-conversion genes was altered, therefore disturbing nitrogen-conversion metabolism. This work contributes to evaluating the potential risks of biofilm systems exposed to PS and PET, maintaining high nitrogen removal and system stability.