Body measurements in Bergamasca sheep

Body Composition Estimation in Breeding Ewes Using Live Weight and Body Parameters Utilizing Image Analysis

Farmers are continually looking for new, reliable, objective, and non-invasive methods for evaluating the conditions of ewes. Live weight (LW) and body condition score (BCS) are used by farmers as a basis to determine the condition of the animal. Body composition is an important aspect of monitoring animal condition. The body composition is the amount of fat, muscle, and bone; knowing the amount of each is important because the information can be used for better strategic management interventions. Experiments were conducted to establish the relationship between body composition and body parameters at key life stages (weaning and pre-mating), using measurements automatically determined by an image processing application for 88 Coopworth ewes. Computerized tomography technology was used to determine the body composition. Multivariate linear regression (MLR), artificial neural network (ANN), and regression tree (RT) statistical analysis methods were used to develop a relationship between the body parameters and the body composition. A subset of data was used to validate the predicted model. The results showed a correlation between fat, muscle, and bone determined by CT and the fat, muscle, and bone weight estimated by the live weight and body parameters calculated using the image processing application, with r² values of 0.90 for fat, 0.72 for muscle, and 0.50 for bone using ANN. From these results, farmers can utilize these measurements to enhance nutritional and management practices.

A time-series assessment of the productive and reproductive performance of Balochi sheep

This study was carried out to find the environmental factors which have a significant effect on the productive and reproductive characteristics of the Balochi sheep. The study used data from 729 ewes and 71 rams for a period of 13 years (2003 to 2016) at the Sheep Research Center, Yet Abad, Balochistan, Pakistan. The productive characteristics considered for current study were weight, birth weight (BW), 90 days weight (3 MW), 180 days weight (6 MW), 270 days weight (9 MW), 365 days (12 MW), and 2 years weight (24 MW). Reproductive characteristics measured were ewe age at first service (AFS), service period (SP) of ewe, age at 1st lambing (AFL) of ewe, lambing interval (LI), and sex ratio. Restricted maximum likelihood (REML) assessments of different characteristics were analyzed for the Balochi sheep on the basis of location, birth year (YOB), season of birth (SOB), type of birth (TOB), and sex of lamb. The average means ± SE for BW, WW, 6 MW, 9 MW, 12 MW, and 24 MW, were 3.28 ± 0.83, 17.20 ± 2.04, 21.94 ± 1.60, 26.20 ± 2.87, 30.21 ± 3.58, and 37.11 ± 2.84 for ram and 2.56 ± 0.53, 15.69 ± 1.45, 19.57 ± 1.77, 24.07 ± 2.70, 27.46 ± 2.09, and 34.61 ± 2.32 for ewes respectively. The results of reproductive performance of the Balochi sheep age of ewe at the time of breeding, age at first service (AFS), service period (SP), age at first lambing (AFL), and lambing interval (LI) were 1078 ± 2.2, 579.61 ± 0.6, 206.25 ± 0.2, 731.67 ± 0.3, and 256.60 ± 0.3 days respectively. The twining and lambing rates were 10.12% and 86.78%, while the sex proportion for ram and ewes was 50.12:49.37. Area, sex, and TOB had a significant (p < 0.05) effect on weight while TOB (twinning rate) was higher in Balochi sheep. These conditions affected the productive and reproductive performance of the Balochi sheep. At Sheep Research Center, Yet Abad, Balochistan, Pakistan, performed fundamentally better in all qualities such as weight gain and reproductive performance. Supplements were given with feed to get maximum profit from the sheep of Yet Abad farm. The birth weight of males was higher than that of females and single conceived Balochi sheep were heavier than that of twins. Thus, it was concluded that the Balochi sheep can be improved with better management practices, feeding, and disease control.

Evaluation of morphological traits and physiological variables of several Chinese goat breeds and their crosses

The current study was undertaken to evaluate some morphological traits of the goat breeds raised in Southwest China. The field experimentation and data collection were from 434 animals presenting seven breeds of the Dazu black goat (DBG; n = 203), Saanen milk goat (SMG; n = 50), Black Boer × Dazu black goat (BXC; n = 28), Hechuan white goat (HWG; n = 49), Inner Mongolia Cashmere goat (IMCG; n = 25), IMCG × DBG (F₁; n = 57) and F₁ × F₁ (F₂; n = 22). All studied animals were adult and selected to be at the same age (36.50 ± 0.75 months). After editing, more than 20 morphological and production traits like body condition score (BCS), testicle measurements, coat colour, fibre traits, skin colour, horn colour, horn shape, horn orientation, wattles, front hair, beard, ear shape, ear size, rump angle, hind leg angulation and physiological variables were analysed. BXC and DBG had dark coat colour, whilst SMG, HWG and IMCG had light colour, whilst F₁ and F₂ ranged from light to dark coat colour. Concerning BCS, the breeds BXC and DBG were characterized as fat goats, whilst SMG, HWG, F₁ and F₂ were average, whilst IMCG was thin. The maximum values for testis measurements were recorded for BXC, SMG and DBG. For fibre traits, IMCG, F₁ and F₂ were the most superior. BXC and DBG males have good fertility parameters. The highest values for rectal temperature, skin temperature and breath rate were recorded for SMG. These findings revealed the presence of a wide range of morphological differences among studied goat breeds. Such diversity in the performance of goat breeds raised in Southwest China is crucial to implement reliable selection strategies for breeding goats in this area.

Classification and conservation priority of five Deccani sheep ecotypes of Maharashtra, India

Characterization of Indian livestock breeds has mostly been limited to single breed/population focused on either physical description of traditionally recognized breeds/populations or to their genetic description. Usually, morphological and genetic characterization has taken place in isolation. A parallel morphological characterization of genetically identified breeds or genetic characterization of morphologically described breeds is mostly missing, and their conservation priorities have largely been based on solely considering degree of endangerment. This study uses parallel approach based on morphometric and genetic differentiation for classification of five sheep ecotypes of Maharashtra state, and sets their conservation priority using threat parameters, current utilities/merits and contribution to genetic diversity. A total of 1101 animals were described for 7 body measurements for morphometric characterization. From this sample set, 456 animals were genotyped for 25 microsatellite markers for genetic characterization. Conservation priorities were assessed combining genetic and non-genetic factors. All studied traits varied significantly among ecotypes (p<0.05). All morphometric traits exhibited substantial sexual dimorphism except ear length. Males were 42% heavier than females. Madgyal sheep were the largest amongst the five ecotypes. In the stepwise discriminant analysis, all measured traits were significant and were found to have potential discriminatory power. Tail length was the most discriminatory trait. The Mahalanobis distance of the morphological traits between Kolhapuri and Madgyal was maximum (12.07) while the least differentiation was observed between Madgyal and Solapuri (1.50). Discriminant analysis showed that 68.12% sheep were classified into their source population. The Sangamneri sheep showed least assignment error (22%) whilst Solapuri exhibited maximum error level (41%). A total of 407 alleles were observed, with an average of 16.28 alleles per locus. Sufficient levels of genetic diversity were observed in all the ecotypes with observed heterozygosity values exceeding 0.47 and gene diversity values exceeding 0.76. About 6% of the total genetic variation was explained by population differences (F_ST = 0.059). Pairwise F_ST values indicated least differentiation between Solapuri and Madgyal (0.025). In terms of genetic distances, Kolhapuri and Lonand were most closely related (Ds = 0.177). The most probable structure clustering of the five studied populations was at K = 5. The study showed a fair congruence between the dendrogram constructed on the basis of Mahalanobis distances and Nei’s as well as Reynolds genetic distances. The findings gave highest conservation priority to Lonand and least to Solapuri ecotype.

Genetic and phenotypic variation among four Nguni sheep breeds using random amplified polymorphic DNA (RAPD) and morphological features

This study was conducted to investigate phenotypic and genetic differentiation among the four Nguni sheep breeds. Sheep with two permanent incisors and above were sampled from areas, namely KwaZulu-Natal (Zulu sheep), Limpopo (Pedi sheep), Mozambique (Landim sheep) and Swaziland (Swazi sheep). The Dorper was used as an out-group. Eight morphometric variables were measured from each animal, and blood samples were collected (n = 50 per population) for genetic characterization. The mean body weights for sheep were 30.41 ± 0.41, 35.34 ± 0.43, 35.23 ± 0.43, 37.63 ± 0.42 and 52.84 ± 0.30 for Swazi, Zulu, Landim, Pedi and Dorper, respectively. Morphometric cluster analysis showed the Landim, Swazi and Zulu breeds in one cluster. The Pedi sheep were closer to the Dorper than to the other Nguni sheep. Random amplified polymorphic DNA (RAPD) technique was used to assess genetic variation. Eight primers were selected for analysis based on band pattern quality, reproducibility and the presence of distinctive bands. The Swazi sheep formed a cluster with Zulu sheep, and the Pedi formed a cluster with the Dorper. These results confirm indications by other researchers that Pedi sheep are genetically distant from Zulu and Swazi sheep breeds. This could indicate the possibility of cross breeding Zulu and Swazi sheep as a possible conservation strategy to control inbreeding. The mtDNA should be analyzed to trace the relationships between Pedi and the three Nguni sheep breeds through maternal lines.

Principal Component Analysis of Conformation and Blood Marker Traits at Pre- and Post-Weaning Stages of Growth in F2 Crossbred Nigerian Indigenous X Landrace Pigs

Linear body measurements and blood hematology and biochemistry parameters were taken on 92 and 15 grower pigs, respectively, chosen randomly from a crossbred F2 population of Nigerian Indigenous (NI) x Landrace pigs to evaluate body conformation and blood marker traits using a multivariate approach. For linear body measurements at pre-weaning stage (4 weeks old), two principal components accounted for 91.63% of the total variation in body conformation traits, while at post weaning stage (12 weeks old), one principal component accounted for 73.63% of the total variations in body conformation traits. The first factor (principal component) accounted for 72.34% of the total variance (body weight) while the second factor accounted for 19.29% (ear length) at pre-weaning stage. While at post-weaning stage only one factor contributed to the total variability of the original six traits tested, with 73.63% (body length). For blood parameters, three principal components accounted for 81.85% of the total variation at pre-weaning stage while 89.44% of the total variation at post-weaning stage was accounted for by four principal components. The first factor (principal component) accounted for 38.048% (Packed cell volume), the second accounted for 24.72% (hemoglobin) and the third accounted for 19.08% (aspartate transaminase). While at the post-weaning stage, the first factor was influenced by red blood corpuscles (37.17%), the second factor had its loading for hemoglobin (25.80%), the third factor had loading for white blood corpuscles (13.67%), while the fourth factor had loading for alkaline phosphatase only (12.80%). Using communality extraction factors, ear length best described body conformation at the pre-weaning stage; whereas, at post-weaning stage, body length was the best descriptor. In blood parameters, packed cell volume best described blood marker traits at the pre-weaning stage; whereas, at the post-weaning stage, red blood corpuscles best described it. Hence, the two extracted factors in linear body measurements and in blood parameters could be considered in breeding programs to improve and predict body conformation in crossbred pigs, as well as predict blood marker traits.

Morphological and microsatellite DNA diversity of Nigerian indigenous sheep

Background

Sheep is important in the socio-economic lives of people around the world. It is estimated that more than half of our once common livestock breeds are now endangered. Since genetic characterization of Nigerian sheep is still lacking, we analyzed ten morphological traits on 402 animals and 15 microsatellite DNA markers in 384 animals of the 4 Nigerian sheep breeds to better understand genetic diversity for breeding management and germplasm conservation.

Results

Morphological traits of Uda and Balami were significantly (P < 0.05) higher than Yankasa, which were both higher than West African Dwarf (WAD) sheep. Stepwise discriminant analysis showed tail length, rump height, chest girth, ear length and chest depth as the most discriminating variables for classification. Mahalanobis distances show the least differentiation between Uda and Balami and the largest between WAD and Balami sheep. While 93.3% of WAD sheep were correctly assigned to their source genetic group, 63.9% of Yankasa, 61.2% of Balami and 45.2% of Uda were classified correctly by nearest neighbour discriminant analysis. The overall high Polymorphism Information Content (PIC) of all microsatellite markers ranged from 0.751 to 0.927 supporting their use in genetic characterization. Expected heterozygosity was high for all loci (0.783 to 0.93). Mean heterozygote deficiency across all populations (0.171 to 0.534) possibly indicate significant inbreeding (P < 0.05). Mean values for F_ST, F_IT and F_IS statistics across all loci were 0.088, 0.394 and 0.336 respectively. Yankasa and Balami are the most closely related breeds (D_A = 0.184) while WAD and Balami are the farthest apart breeds (D_A = 0.665), which is coincident with distance based on morphological analysis and population structure assessed by STRUCTURE.

Conclusions

These results suggest that within-breed genetic variation in Nigerian sheep is higher than between-breeds and may be a valuable tool for genetic improvement and conservation. The higher genetic variability in Yankasa suggests the presence of unique ancestral alleles reflecting the presence of certain functional genes which may result in better adaptability in more agro-ecological zones of Nigeria. These genetic characteristics are potentially useful in planning improvement and conservation strategies in Nigerian indigenous sheep.

Morphological traits in Portuguese Bordaleira de Entre Douro e Minho sheep: divergence of the breed

Production of the autochthonous Portuguese sheep breed Bordaleira de Entre Douro e Minho (BEDM) is directly associated with the concept of sustainable agriculture. This concept focuses on the adaptation of animal populations to adverse environmental conditions, high biological efficiency and traditional management. Native BEDM sheep can be divided into the following two types on the basis of their geographic location in Portugal and how they are managed: the Várzea, which is found mainly in the lower Entre Douro e Minho region, and the Mountain type, which traditionally prefers common areas. In the present work, we analysed records of liveweight, 15 body measurements and eight indexes of the BEDM sheep, to explore the ability to distinguish different characteristics between BEDM sheep populations. The records that were obtained and analysed by principal component analysis for 412 BEDM sheep (68 males and 344 females) included the following: heights at withers (HW), at back (HB), at rump (HR) and at chest (HC); lengths of trunk (LT), of rump (LR), of head (LH) and of perineum (LP); widths of head (WH), of chest (WC), of biiliac (WBIIL) and of biischiatic (WBIIS); perimeters of the shin (PS), thorax (PT), and abdomen (PA); and finally indexes such as cephalic index (CI), thoracic index (TI), pelvic index (PI), body index (BI), relative chest depth index (RDCI), lateral corporal index (LCI), relative shin thickness index (RTSI) and dactyl–thoracic index (DTI). The Várzea BEDM was morphologically superior to the Mountain variety, with this superiority more evident in females. Height measurements, especially HW in adult females, provided an excellent measurement reference for biometrical breed studies. Functional index values confirmed the BEDM Mountain variety’s appropriateness for mountainous regions. Relationships among body measurements suggested that the breed standard needed to be updated. The research presented here was used by the Portuguese Ministery to split BEDM into two new breeds; the traditional variety called Várzea now represents the new BEDM breed, whereas the Mountain variety represents the new Churra do Minho breed.

The Garfagnina goat: a zootechnical overview of a local dairy population

Domestic livestock with a limited distribution are increasingly recognized in the action plans of the European Union as a reason for protecting rural land. The preservation and enhancement of the native germplasm and traits selected through the ages in different areas of farming is the first step in increasing typical products at a time when high quality products are increasingly in demand. This is the first time that a zootechnical overview has been performed on the Italian native goat population named "Garfagnina," which is registered on the Tuscan regional repertory of genetic resources at risk of extinction. The aim of the study was to give added value to this population by focusing on particular traits that could be used for promoting typical products. Data on the size of the local goats, zoometric measures, breeding system, milk quality, and genetic polymorphisms were collected to get insight into the current state of the population of this type of goat. The native goat population is reared in Tuscany in central Italy, mostly for its milk. The local goat farms considered in our study are located in the hills and mountains of the northwestern Tuscan Apennine area. For every farm we measured at least 10% of the reproductive females (273), randomly chosen, and all reproductive males (47) for a total of 320 subjects. Regarding the management of the animals and the feeding system, semi-extensive farming is practiced in all the flocks. From a morphological point of view the animals are relatively homogeneous, especially in terms of zoometric data, whereas they show a wider variability regarding coat. Milk gross and fatty acid composition were similar to that reported in the literature for bulk goat milk. Moreover, the average of somatic cell count and standard plate count found in Garfagnina goat milk indicated good hygienic farm management and correct milking practices, although milking is mainly manual. The average number of globules per milliliter found in Garfagnina goat milk was almost double compared with the literature, whereas the average diameter was lower. Milk coagulation properties were scarce, thus indicating poor cheesemaking aptitude of Garfagnina milk. Selecting haplotypes carrying alleles associated with a higher expression of the specific casein could help improve milk cheesemaking aptitude. Moreover, the rather high frequency of the faint CSN1S1*F allele and the occurrence of CSN2*0 might suggest that Garfagnina goat milk could be used, after an appropriate selection, for direct consumption of milk at low casein content for intolerant human subjects.