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Liu J, Chen B, Zhang R, Li Y, Chen R, Zhu S, Wen S, Luan T. Recent progress in analytical strategies of arsenic-binding proteomes in living systems. Anal Bioanal Chem 2023; 415:6915-6929. [PMID: 37410126 DOI: 10.1007/s00216-023-04812-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 06/10/2023] [Accepted: 06/15/2023] [Indexed: 07/07/2023]
Abstract
Arsenic (As) is one of the most concerning elements due to its high exposure risks to organisms and ecosystems. The interaction between arsenicals and proteins plays a pivotal role in inducing their biological effects on living systems, e.g., arsenicosis. In this review article, the recent advances in analytical techniques and methods of As-binding proteomes were well summarized and discussed, including chromatographic separation and purification, biotin-streptavidin pull-down probes, in situ imaging using novel fluorescent probes, and protein identification. These analytical technologies could provide a growing body of knowledge regarding the composition, level, and distribution of As-binding proteomes in both cells and biological samples, even at the organellar level. The perspectives on analysis of As-binding proteomes are also proposed, e.g., isolation and identification of minor proteins, in vivo targeted protein degradation (TPD) technologies, and spatial As-binding proteomics. The application and development of sensitive, accurate, and high-throughput methodologies of As-binding proteomics would enable us to address the key molecular mechanisms underlying the adverse health effects of arsenicals.
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Affiliation(s)
- Jiahui Liu
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China
| | - Baowei Chen
- Southern Marine Science and Engineering Guangdong Laboratory, School of Marine Sciences, Sun Yat-sen University, Zhuhai, 519082, China
| | - Ruijia Zhang
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China
| | - Yizheng Li
- Southern Marine Science and Engineering Guangdong Laboratory, School of Marine Sciences, Sun Yat-sen University, Zhuhai, 519082, China
| | - Ruohong Chen
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China
| | - Siqi Zhu
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China
| | - Shijun Wen
- State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, 510060, China
| | - Tiangang Luan
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
- Institute of Environmental and Ecological Engineering, Guangdong University of Technology, Guangzhou, 510006, China.
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Xing W, Geng H, Wang Y, Zhao L, Yang Y, Wang Y, Tian S, Cao Y, Zhang Z, Li L. Accumulation and speciation of arsenic in Eisenia fetida in sodium arsenite spiked soils - A dynamic interaction between soil and earthworms. CHEMOSPHERE 2023; 319:137905. [PMID: 36696923 DOI: 10.1016/j.chemosphere.2023.137905] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 01/03/2023] [Accepted: 01/16/2023] [Indexed: 06/17/2023]
Abstract
Arsenic (As) is a toxic metalloid that is a significant global pollutant of the environment and a persistent bioaccumulation carcinogen. Earthworms are frequently employed as sentinel organisms to investigate the bioavailability of As in contaminated soils. However, the process of As accumulation in earthworms and the mechanism of transformation of As species in their bodies are not well understood. The accumulation of As and variation of As species in the earthworms (Eisenia fetida) exposed to sodium arsenite (0, 20, and 80 mg kg-1 As) were investigated in this study. The total As concentration of earthworms in the three treatments at various sample times was dose-dependent on soil As content. After 56 days of exposure, the high concentration treatment had the highest total As content (772 ± 21 mg kg-1) in earthworms, followed by the low concentration treatment (579 ± 42 mg kg-1) and control (31 ± 1 mg kg-1). During 56 days, the proportion of trivalent As in earthworms increased from 70% to more than 90%, while pentavalent As decreased by 11-18%. On day 28, the sum of the four organic As species reached a maximum (<1%). Changes in soil As species and an increase in bioavailable As cause earthworms to accumulate more As. The total As in soil after 56 days of exposure was 9.51 ± 0.50, 25.6 ± 0.60, and 82.8 ± 0.28 mg kg-1, which was not significantly different from the total As in soil before the experiment. These findings are useful in assessing the risk of earthworm exposure to sodium arsenite in the soil.
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Affiliation(s)
- Weiqin Xing
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China
| | - Hongpei Geng
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China; State Environmental Protection Key Laboratory of Monitoring for Heavy Metal Pollutants, Changsha, Hunan, 410000, China
| | - Yali Wang
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China; State Environmental Protection Key Laboratory of Monitoring for Heavy Metal Pollutants, Changsha, Hunan, 410000, China.
| | - Linlin Zhao
- Henan Jiyuan Ecological Environment Testing Center, Jiyuan, Henan, 459000, China
| | - Yongqiang Yang
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China
| | - Yale Wang
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China
| | - Shuhang Tian
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China
| | - Yongxin Cao
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China
| | - Zhe Zhang
- School of Sciences, Henan University of Technology, Zhengzhou, 450001, China
| | - Liping Li
- School of the Environmental Engineering, Henan University of Technology, Zhengzhou, Henan, 450001, China; Henan International Joint Laboratory of Environmental Pollution, Remediation and Food Quality Security, Zhengzhou, Henan, 450001, China.
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Zhu Y, Ouyang Z, Du H, Wang M, Wang J, Sun H, Kong L, Xu Q, Ma H, Sun Y. New opportunities and challenges of natural products research: When target identification meets single-cell multiomics. Acta Pharm Sin B 2022; 12:4011-4039. [PMID: 36386472 PMCID: PMC9643300 DOI: 10.1016/j.apsb.2022.08.022] [Citation(s) in RCA: 197] [Impact Index Per Article: 65.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 07/06/2022] [Accepted: 08/22/2022] [Indexed: 12/12/2022] Open
Abstract
Natural products, and especially the active ingredients found in traditional Chinese medicine (TCM), have a thousand-year-long history of clinical use and a strong theoretical basis in TCM. As such, traditional remedies provide shortcuts for the development of original new drugs in China, and increasing numbers of natural products are showing great therapeutic potential in various diseases. This paper reviews the molecular mechanisms of action of natural products from different sources used in the treatment of inflammatory diseases and cancer, introduces the methods and newly emerging technologies used to identify and validate the targets of natural active ingredients, enumerates the expansive list of TCM used to treat inflammatory diseases and cancer, and summarizes the patterns of action of emerging technologies such as single-cell multiomics, network pharmacology, and artificial intelligence in the pharmacological studies of natural products to provide insights for the development of innovative natural product-based drugs. Our hope is that we can make use of advances in target identification and single-cell multiomics to obtain a deeper understanding of actions of mechanisms of natural products that will allow innovation and revitalization of TCM and its swift industrialization and internationalization.
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Affiliation(s)
- Yuyu Zhu
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Zijun Ouyang
- Institute of Marine Biomedicine, School of Food and Drug, Shenzhen Polytechnic, Shenzhen 518055, China
| | - Haojie Du
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing 210023, China
| | - Meijing Wang
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing 210023, China
| | - Jiaojiao Wang
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Haiyan Sun
- Institute of Marine Biomedicine, School of Food and Drug, Shenzhen Polytechnic, Shenzhen 518055, China
| | - Lingdong Kong
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing 210023, China
| | - Qiang Xu
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing 210023, China
| | - Hongyue Ma
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Yang Sun
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Science, Nanjing University, Nanjing 210023, China
- Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, Xuzhou Medical University, Xuzhou 221004, China
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Zhang S, Cao S, Zhou H, Li L, Hu Q, Mao X, Ji S. Realgar induced nephrotoxicity via ferroptosis in mice. J Appl Toxicol 2022; 42:1843-1853. [PMID: 35803278 DOI: 10.1002/jat.4362] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Revised: 07/03/2022] [Accepted: 07/04/2022] [Indexed: 11/11/2022]
Abstract
Ferroptosis is a novel form of iron-dependent cell death that is involved in arsenic-induced toxicity. Realgar is an arsenic-containing Chinese medicine, which can result in nephrotoxicity because of long-term exposure. However, it remains scientifically unknown whether Realgar is an inducer of ferroptosis in the kidney. This study investigated the role of ferroptosis in Realgar-induced kidney toxicity in mice. ICR mice were exposed to Realgar for 28 days and HK2 cells were exposed to Realgar in the presence or absence of treatment with ferrostatin-1, a ferroptosis inhibitor. The ferroptosis-related indicators were further evaluated. Realgar can cause nephrotoxicity in mice by continuous gavage for 28 days, accompanied by an increase in iron accumulation and reactive oxygen species. The reduced expression of Slc7A11 and Gpx4 further confirmed the ferroptosis mediated by Realgar. Meanwhile, Realgar disrupted the antioxidant system as evidenced by the formation of ROS leading to the inactivation of antioxidant enzymes. Realgar caused ferroptosis in a dose-dependent manner, which was significantly reduced by ferrostatin-1 in HK2 cells. This study revealed that Realgar-induced ferroptosis triggered nephrotoxicity in mice and provided new clues to elucidate the mechanism of Realgar-induced nephrotoxicity.
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Affiliation(s)
- Sheng Zhang
- Tianjin University of Traditional Chinese Medicine, Tianjin, China.,NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Shuai Cao
- NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Heng Zhou
- NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Limin Li
- NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Qing Hu
- NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Xiuhong Mao
- NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
| | - Shen Ji
- Tianjin University of Traditional Chinese Medicine, Tianjin, China.,NMPA Key Laboratory for Quality Control of Traditional Chinese Medicine of State Drug Administration, Shanghai Institute for Food and Drug Control, Shanghai, China
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Zhou L, Jiang C, Lin Q. Entropy analysis and grey cluster analysis of multiple indexes of 5 kinds of genuine medicinal materials. Sci Rep 2022; 12:6618. [PMID: 35459282 PMCID: PMC9033816 DOI: 10.1038/s41598-022-10509-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2021] [Accepted: 04/05/2022] [Indexed: 12/13/2022] Open
Abstract
5 kinds of genuine medicinal materials, including Diding (Latin name: Corydalis bungeana Turcz), Purslane (Latin name: Portulaca oleracea L.), straw sandal board (Latin name: Hoya carnosa (L.f.) R. Br), June snow (Latin name: Serissa japonica (Thunb.) Thunb.), pine vine rattan (Latin name: Lycopodiastrum casuarinoides (Spring) Holub. [Lycopodium casuarinoides Spring]), were selected as the research objects. The combustion heat, thermo gravimetric parameters, and fat content, calcium content, trace element content, ash content of 5 kinds of genuine medicinal materials were measured. The combustion heat, differential thermal gravimetric analysis, fat content, calcium content, trace elements content, and ash content of 5 kinds of genuine medicinal materials were used to build a systematic multi-index evaluation system by gray pattern recognition and grey correlation coefficient cluster analysis, which can make up for the gaps in this area and provide scientific basis and research significance for the study of genuine medicinal materials quality. The results showed that the order of combustion heat of 5 kinds of genuine medicinal materials, including Diding, Purslane, straw sandal board, June snow, pine vine rattan, was Diding > June snow > straw sandal board > Purslane > pine vine rattan, the order of fat content (%) of 5 kinds of genuine medicinal materials was straw sandal board > Diding > pine vine rattan > June snow > Purslane, the order of calcium content (%) was pine vine rattan > June snow > Purslane > straw sandal board > Diding, the order of ash content was June snow > Purslane > straw sandal board > pine vine rattan > Diding. From the analysis of thermogravimetric analysis results and thermogravimetric combustion stability, the order of combustion stability of 5 kinds of genuine medicinal materials was June snow > pine Vine rattan > straw sandal board > Diding > Portulaca oleracea. The order of the content of 12 trace elements in 5 kinds of genuine medicinal materials, in terms of trace element content, June snow contains the highest trace elements in all samples. According to combustion heat, combustibility (combustion stability of genuine medicinal materials), fat, calcium, ash, trace element content, the comprehensive evaluation results of multi-index analysis constructed by gray correlation degree, gray correlation coefficient factor analysis, and gray hierarchical cluster analysis showed that the comprehensive evaluation multi-index order of 5 genuine medicinal materials, including Diding, Purslane, straw sandal board, June snow and pine vine rattan, was June snow > straw sandal board > Diding > Purslane > pine vine rattan. Therefore, the comprehensive evaluation results of the quality of genuine medicinal materials selected in this study were June snow the best, followed by straw sandal board. This research has important theoretical and practical significance for the multi-index measurement and comprehensive evaluation of genuine medicinal materials, and can provide scientific basis and research significance for the research of multi-index quality control of genuine medicinal material.
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Affiliation(s)
- Libing Zhou
- Guangxi Science & Technology Normal University, Laibin, 546199, Guangxi, China.
| | - Caiyun Jiang
- Guangxi Science & Technology Normal University, Laibin, 546199, Guangxi, China
| | - Qingxia Lin
- Guangxi Science & Technology Normal University, Laibin, 546199, Guangxi, China
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