1
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Kamilari E, Stanton C, Reen FJ, Ross RP. Uncovering the Biotechnological Importance of Geotrichum candidum. Foods 2023; 12:foods12061124. [PMID: 36981051 PMCID: PMC10048088 DOI: 10.3390/foods12061124] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 02/24/2023] [Accepted: 03/02/2023] [Indexed: 03/30/2023] Open
Abstract
Fungi make a fundamental contribution to several biotechnological processes, including brewing, winemaking, and the production of enzymes, organic acids, alcohols, antibiotics, and pharmaceuticals. The present review explores the biotechnological importance of the filamentous yeast-like fungus Geotrichum candidum, a ubiquitous species known for its use as a starter in the dairy industry. To uncover G. candidum's biotechnological role, we performed a search for related work through the scientific indexing internet services, Web of Science and Google Scholar. The following query was used: Geotrichum candidum, producing about 6500 scientific papers from 2017 to 2022. From these, approximately 150 that were associated with industrial applications of G. candidum were selected. Our analysis revealed that apart from its role as a starter in the dairy and brewing industries, this species has been administered as a probiotic nutritional supplement in fish, indicating improvements in developmental and immunological parameters. Strains of this species produce a plethora of biotechnologically important enzymes, including cellulases, β-glucanases, xylanases, lipases, proteases, and α-amylases. Moreover, strains that produce antimicrobial compounds and that are capable of bioremediation were identified. The findings of the present review demonstrate the importance of G. candidum for agrifood- and bio-industries and provide further insights into its potential future biotechnological roles.
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Affiliation(s)
- Eleni Kamilari
- APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland
- School of Microbiology, University College Cork, T12 YT20 Cork, Ireland
| | - Catherine Stanton
- APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland
- School of Microbiology, University College Cork, T12 YT20 Cork, Ireland
- Department of Biosciences, Teagasc Food Research Centre, Moorepark, Fermoy, P61 C996 Co. Cork, Ireland
| | - F Jerry Reen
- School of Microbiology, University College Cork, T12 YT20 Cork, Ireland
- Synthesis and Solid State Pharmaceutical Centre, University College Cork, T12 YT20 Cork, Ireland
| | - R Paul Ross
- APC Microbiome Ireland, University College Cork, T12 YT20 Cork, Ireland
- School of Microbiology, University College Cork, T12 YT20 Cork, Ireland
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2
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T.sriwong K, Matsuda T. Facile mussel-inspired polydopamine-coated 3D-printed bioreactors for continuous flow biocatalysis. REACT CHEM ENG 2022. [DOI: 10.1039/d2re00040g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Enantiopure alcohol production by a flow system of 3D-printed bioreactor with immobilized Geotrichum candidum acetophenone reductase (GcAPRD).
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Affiliation(s)
- Kotchakorn T.sriwong
- Department of Life Science and Technology, School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8501, Japan
| | - Tomoko Matsuda
- Department of Life Science and Technology, School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8501, Japan
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3
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T.sriwong K, Kamogawa R, Castro Issasi CS, Sasaki M, Matsuda T. Geotrichum candidum acetophenone reductase immobilization on reduced graphene oxide: A promising biocatalyst for green asymmetric reduction of ketones. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2021.108263] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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4
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Baydaş Y, Kalay E, Şahin E. Production of enantiomerically enriched chiral carbinols using whole-cell biocatalyst. BIOCATAL BIOTRANSFOR 2020. [DOI: 10.1080/10242422.2020.1837782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Yasemin Baydaş
- Faculty of Engineering, Department of Food Engineering, Bayburt University, Bayburt, Turkey
| | - Erbay Kalay
- Kars Vocational School, Kafkas University, Kars, Turkey
| | - Engin Şahin
- Faculty of Health Sciences, Department of Nutrition and Dietetics, Bayburt University, Bayburt, Turkey
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5
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T Sriwong K, Koesoema AA, Matsuda T. Organic-inorganic nanocrystal reductase to promote green asymmetric synthesis. RSC Adv 2020; 10:30953-30960. [PMID: 35516042 PMCID: PMC9056328 DOI: 10.1039/d0ra03160g] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Accepted: 08/11/2020] [Indexed: 11/21/2022] Open
Abstract
An acetophenone reductase from Geotrichum candidum (GcAPRD) was immobilized by the organic–inorganic nanocrystal method. The GcAPRD nanocrystal presented improved stability and recyclability compared with those of the free GcAPRD. Moreover, the GcAPRD nanocrystal reduced broad kinds of ketones with excellent enantioselectivities to produce beneficial chiral alcohols such as (S)-1-(3′,4′-dichlorophenyl)ethanol with >99% yield and >99% ee. The robust and versatile properties of the GcAPRD nanocrystal demonstrated an approach to promote green asymmetric synthesis and sustainable chemistry. Geotrichum candidum acetophenone reductase (GcAPRD) nanocrystal reduces broad kinds of ketones to their corresponding (S)-alcohols with excellent enantioselectivity.![]()
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Affiliation(s)
- Kotchakorn T Sriwong
- Department of Life Science and Technology, School of Life Science and Technology, Tokyo Institute of Technology 4259 Nagatsuta-cho, Midori-ku Yokohama 226-8501 Japan +81-45-924-5757 +81-45-924-5757
| | - Afifa Ayu Koesoema
- Department of Life Science and Technology, School of Life Science and Technology, Tokyo Institute of Technology 4259 Nagatsuta-cho, Midori-ku Yokohama 226-8501 Japan +81-45-924-5757 +81-45-924-5757
| | - Tomoko Matsuda
- Department of Life Science and Technology, School of Life Science and Technology, Tokyo Institute of Technology 4259 Nagatsuta-cho, Midori-ku Yokohama 226-8501 Japan +81-45-924-5757 +81-45-924-5757
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6
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Hoshino T, Yamabe E, Hawari MA, Tamura M, Kanamaru S, Yoshida K, Koesoema AA, Matsuda T. Oxidation of aromatic and aliphatic aldehydes to carboxylic acids by Geotrichum candidum aldehyde dehydrogenase. Tetrahedron 2020. [DOI: 10.1016/j.tet.2020.131387] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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7
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Wang H, Li X, Wang Y, Yang Y, Jia L, Wang Y. One‐Pot Synthesis of Carbon‐Based Solid Acid Polymer Catalyst: Efficient Catalysts for Liquid‐Phase Nitration of Alkanes. ChemistrySelect 2020. [DOI: 10.1002/slct.202000750] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Hefang Wang
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
| | - Xuehan Li
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
| | - Yuanyuan Wang
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
| | - Yongfang Yang
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
| | - Liyuan Jia
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
| | - Yanji Wang
- School of Chemical Engineering and TechnologyHebei University of Technology Tianjin 300130 P. R. China
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8
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Karimi B, Tavakolian M, Akbari M, Mansouri F. Ionic Liquids in Asymmetric Synthesis: An Overall View from Reaction Media to Supported Ionic Liquid Catalysis. ChemCatChem 2018. [DOI: 10.1002/cctc.201701919] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Babak Karimi
- Department of Chemistry; Institute for Advanced Studies in Basic Sciences (IASBS); Zanjan 45137-66731 Iran
- Research Center for Basic Sciences & Modern Technologies (RBST); Institute for Advanced Studies in Basic Sciences (IASBS); Zanjan 45137-66731 Iran
| | - Mina Tavakolian
- Department of Chemistry; Institute for Advanced Studies in Basic Sciences (IASBS); Zanjan 45137-66731 Iran
| | - Maryam Akbari
- Department of Chemistry; Institute for Advanced Studies in Basic Sciences (IASBS); Zanjan 45137-66731 Iran
| | - Fariborz Mansouri
- Department of Chemistry; Institute for Advanced Studies in Basic Sciences (IASBS); Zanjan 45137-66731 Iran
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9
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Strengthening NADPH Regeneration for Improving Photo-biocatalytic Ketones Asymmetric Reduction Reaction by Synechocystis Through Overexpression of FNR. Catal Letters 2018. [DOI: 10.1007/s10562-018-2367-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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10
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Mai NL, Koo YM. Whole-Cell Biocatalysis in Ionic Liquids. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2018; 168:105-132. [PMID: 30488166 DOI: 10.1007/10_2018_77] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The use of whole-cell biocatalysis in ionic liquid (IL)-containing systems has attracted increasing attention in recent years. Compared to bioreactions catalyzed by isolated enzymes, the major advantage of using whole cells in biocatalytic processes is that the cells provide a natural intracellular environment for the enzymes to function with in situ cofactor regeneration. To date, the applications of whole-cell biocatalysis in IL-containing systems have focused on the production of valuable compounds, mainly through reduction, oxidation, hydrolysis, and transesterification reactions. The interaction mechanisms between the ILs and biocatalysts in whole-cell biocatalysis offer the possibility to effectively integrate ILs with biotransformation. This chapter discusses these interaction mechanisms between ILs and whole-cell catalysts. In addition, examples of whole-cell catalyzed reactions with ILs will also be discussed. Graphical Abstract.
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Affiliation(s)
- Ngoc Lan Mai
- Department of Biological Engineering, Inha University, Incheon, South Korea
| | - Yoon-Mo Koo
- Department of Biological Engineering, Inha University, Incheon, South Korea.
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11
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de Paula BR, Zampieri DS, Nasário FD, Rodrigues JAR, Moran PJ. Regioselectivity Control of Enone Reduction Mediated by Aqueous Baker's Yeast with Addition of Ionic Liquid [bmim(PF 6 )]. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2017. [DOI: 10.1016/j.bcab.2017.10.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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12
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Affiliation(s)
- Toshiyuki Itoh
- Department
of Chemistry and Biotechnology, Graduate School of Engineering and ‡Center for Research
on Green Sustainable Chemistry, Tottori University, 4-101 Koyama-minami, Tottori 680-8552, Japan
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13
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Voges M, Fischer C, Wolff D, Held C. Influence of Natural Solutes and Ionic Liquids on the Yield of Enzyme-Catalyzed Reactions: Measurements and Predictions. Org Process Res Dev 2017. [DOI: 10.1021/acs.oprd.7b00178] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Matthias Voges
- Laboratory of Thermodynamics,
Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
| | - Charlotte Fischer
- Laboratory of Thermodynamics,
Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
| | - Dominik Wolff
- Laboratory of Thermodynamics,
Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
| | - Christoph Held
- Laboratory of Thermodynamics,
Department of Biochemical and Chemical Engineering, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
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14
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Activity of Lactobacillus brevis Alcohol Dehydrogenase on Primary and Secondary Alcohol Biofuel Precursors. FERMENTATION-BASEL 2015. [DOI: 10.3390/fermentation1010024] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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15
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Sugiyama Y, Senda M, Senda T, Matsuda T. Crystallization and preliminary crystallographic analysis of acetophenone reductase from Geotrichum candidum NBRC 4597. Acta Crystallogr F Struct Biol Commun 2015; 71:320-3. [PMID: 25760708 PMCID: PMC4356309 DOI: 10.1107/s2053230x15002265] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2014] [Accepted: 02/03/2015] [Indexed: 11/11/2022] Open
Abstract
Acetophenone reductase (APRD) from Geotrichum candidium NBRC 4597 was crystallized by the hanging-drop vapour-diffusion method using PEG 3350 as a precipitant. The crystal belonged to space group P6522, with unit-cell parameters a = b = 104.5, c = 273.7 Å, and diffracted to 2.6 Å resolution. Phasing using the single-wavelength anomalous diffraction method was successful. Model building and crystallographic refinement are in progress.
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Affiliation(s)
- Yosuke Sugiyama
- Department of Bioengineering, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8501, Japan
| | - Miki Senda
- Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Toshiya Senda
- Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Tomoko Matsuda
- Department of Bioengineering, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa 226-8501, Japan
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16
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Fan LL, Li HJ, Chen QH. Applications and mechanisms of ionic liquids in whole-cell biotransformation. Int J Mol Sci 2014; 15:12196-216. [PMID: 25007820 PMCID: PMC4139838 DOI: 10.3390/ijms150712196] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2014] [Revised: 06/13/2014] [Accepted: 07/01/2014] [Indexed: 01/08/2023] Open
Abstract
Ionic liquids (ILs), entirely composed of cations and anions, are liquid solvents at room temperature. They are interesting due to their low vapor pressure, high polarity and thermostability, and also for the possibility to fine-tune their physicochemical properties through modification of the chemical structures of their cations or anions. In recent years, ILs have been widely used in biotechnological fields involving whole-cell biotransformations of biodiesel or biomass, and organic compound synthesis with cells. Research studies in these fields have increased from the past decades and compared to the typical solvents, ILs are the most promising alternative solvents for cell biotransformations. However, there are increasing limitations and new challenges in whole-cell biotransformations with ILs. There is little understanding of the mechanisms of ILs' interactions with cells, and much remains to be clarified. Further investigations are required to overcome the drawbacks of their applications and to broaden their application spectrum. This work mainly reviews the applications of ILs in whole-cell biotransformations, and the possible mechanisms of ILs in microbial cell biotransformation are proposed and discussed.
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Affiliation(s)
- Lin-Lin Fan
- Department of Food Science and Nutrition, Zhejiang University, Hangzhou 310058, China.
| | - Hong-Ji Li
- Department of Food Science and Nutrition, Zhejiang University, Hangzhou 310058, China.
| | - Qi-He Chen
- Department of Food Science and Nutrition, Zhejiang University, Hangzhou 310058, China.
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17
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Hoff BH, Sundby E. Preparation of pharmaceutical important fluorinated 1-arylethanols using isolated enzymes. Bioorg Chem 2013; 51:31-47. [DOI: 10.1016/j.bioorg.2013.09.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2013] [Revised: 09/06/2013] [Accepted: 09/12/2013] [Indexed: 10/26/2022]
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18
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Rowan AS, Moody TS, Howard RM, Underwood TJ, Miskelly IR, He Y, Wang B. Preparative access to medicinal chemistry related chiral alcohols using carbonyl reductase technology. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.tetasy.2013.09.015] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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19
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Wang XT, Yue DM, Zong MH, Lou WY. Use of Ionic Liquid To Significantly Improve Asymmetric Reduction of Ethyl Acetoacetate Catalyzed by Acetobacter sp. CCTCC M209061 Cells. Ind Eng Chem Res 2013. [DOI: 10.1021/ie401561r] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xiao-Ting Wang
- Laboratory of Applied
Biocatalysis,
School of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, Guangdong,
People’s Republic of China
| | - Dong-Mei Yue
- Laboratory of Applied
Biocatalysis,
School of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, Guangdong,
People’s Republic of China
| | - Min-Hua Zong
- State Key Laboratory of Pulp
and Paper Engineering, South China University of Technology, Guangzhou 510640, Guangdong, People’s Republic of China
| | - Wen-Yong Lou
- Laboratory of Applied
Biocatalysis,
School of Light Industry and Food Sciences, South China University of Technology, Guangzhou 510640, Guangdong,
People’s Republic of China
- State Key Laboratory of Pulp
and Paper Engineering, South China University of Technology, Guangzhou 510640, Guangdong, People’s Republic of China
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20
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Venkataraman S, Roy RK, Chadha A. Asymmetric Reduction of Alkyl-3-oxobutanoates by Candida parapsilosis ATCC 7330: Insights into Solvent and Substrate Optimisation of the Biocatalytic Reaction. Appl Biochem Biotechnol 2013; 171:756-70. [PMID: 23892621 DOI: 10.1007/s12010-013-0379-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2012] [Accepted: 07/01/2013] [Indexed: 10/26/2022]
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21
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Ramos ADS, Ribeiro JB, Lopes RDO, de Souza ROMA. Whole Cells in Enantioselective Reduction oftert-Butyl Acetoacetate. SYNTHETIC COMMUN 2013. [DOI: 10.1080/00397911.2012.655685] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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22
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Yamamoto T, Nakata Y, Cao C, Sugiyama Y, Asanuma Y, Kanamaru S, Matsuda T. Acetophenone reductase with extreme stability against a high concentration of organic compounds or an elevated temperature. Appl Microbiol Biotechnol 2013; 97:10413-21. [PMID: 23504059 DOI: 10.1007/s00253-013-4801-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2012] [Revised: 02/16/2013] [Accepted: 02/20/2013] [Indexed: 11/27/2022]
Abstract
The gene encoding acetophenone reductase (APRD), a useful biocatalyst for producing optically pure alcohols, was cloned from the cDNA of Geotrichum candidum NBRC 4597. The gene contained an open reading frame that consisted of 1,029 nucleotides corresponding to 342 amino acid residues. The subunit molecular weight was calculated to be 36.7 kDa. The predicted amino acid sequence did not have significant similarity to those of the acetophenone reductase reported previously. The gene was inserted into the pET-21b(+) expression vector and expressed in Escherichia coli Rosetta™(DE3)pLysS by induction with 1 mM of isopropyl-β-D-thiogalactopyranoside. E. coli cell-free extract gave 21.9 U/mg APRD activity, which was 81 times that of the G. candidum cell-free extract. The enzyme was purified with a HisTrap FF crude column. The enzyme exhibited the highest activity at 60 °C, and optimum reducing and oxidizing activity were observed in a pH range around 7.0-8.0 and 8.5, respectively. The enzyme was most stable at 60 °C and pH 6.5-7.5. The Vmax and the apparent Km value of the reductase were 67.6 μmol/min per milligram of protein and 0.146 mM for acetophenone, respectively. From 4 % (v/v) 4-phenyl-2-butanone, (S)-4-phenyl-2-butanol was obtained with a yield >80 % and an enantiomeric excess >99 % in a 20 h reaction recycling NADH with 15 % (v/v) 2-propanol.
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Affiliation(s)
- Takuro Yamamoto
- Graduate School of Bioscience and Biotechnology, Department of Bioengineering, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 2268501, Japan
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23
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Zampieri DS, de Paula BR, Zampieri LA, Vale JA, Rodrigues JAR, Moran PJ. Enhancements of enantio and diastereoselectivities in reduction of (Z)-3-halo-4-phenyl-3-buten-2-one mediated by microorganisms in ionic liquid/water biphasic system. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.molcatb.2012.08.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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24
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Effects of Ionic Liquids on the Growth of Arthrobacter simplex and Improved Biodehydrogenation in an Ionic Liquid-Containing System with Immobilized Cells. Appl Biochem Biotechnol 2012; 167:2131-43. [DOI: 10.1007/s12010-012-9762-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2012] [Accepted: 05/29/2012] [Indexed: 10/28/2022]
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25
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Efficient production of glycyrrhetic acid 3-O-mono-β-d-glucuronide by whole-cell biocatalysis in an ionic liquid/buffer biphasic system. Process Biochem 2012. [DOI: 10.1016/j.procbio.2011.10.024] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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26
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Baum S, van Rantwijk F, Stolz A. Application of a Recombinant
Escherichia coli
Whole‐Cell Catalyst Expressing Hydroxynitrile Lyase and Nitrilase Activities in Ionic Liquids for the Production of (
S
)‐Mandelic Acid and (
S
)‐Mandeloamide. Adv Synth Catal 2012. [DOI: 10.1002/adsc.201100391] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Stefanie Baum
- Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70569 Stuttgart, Germany, Fax: (+49)‐711‐685‐65725
| | - Fred van Rantwijk
- Laboratory of Biocatalysis and Organic Chemistry, Department of Biotechnology, Delft University of Technology, Julianalaan 136, 2628 BL Delft, The Netherlands
| | - Andreas Stolz
- Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70569 Stuttgart, Germany, Fax: (+49)‐711‐685‐65725
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27
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Calvin SJ, Mangan D, Miskelly I, Moody TS, Stevenson PJ. Overcoming Equilibrium Issues with Carbonyl Reductase Enzymes. Org Process Res Dev 2011. [DOI: 10.1021/op200241u] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Susan J. Calvin
- School of Chemistry and Chemical Engineering, Queen’s University Belfast, David Keir Building, Stranmillis Road, Belfast, Northern Ireland BT95AG
| | - David Mangan
- Almac, Biocatalysis Group, David Keir Building, Stranmillis Road, Belfast, Northern Ireland BT95AG
| | - Iain Miskelly
- Almac, Biocatalysis Group, David Keir Building, Stranmillis Road, Belfast, Northern Ireland BT95AG
| | - Thomas S. Moody
- Almac, Biocatalysis Group, David Keir Building, Stranmillis Road, Belfast, Northern Ireland BT95AG
| | - Paul J. Stevenson
- School of Chemistry and Chemical Engineering, Queen’s University Belfast, David Keir Building, Stranmillis Road, Belfast, Northern Ireland BT95AG
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28
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Ou ZM, Shi HB, Sun XY, Shen WH. Synthesis of S-licarbazepine by asymmetric reduction of oxcarbazepine with Saccharomyces cerevisiae CGMCC No. 2266. ACTA ACUST UNITED AC 2011. [DOI: 10.1016/j.molcatb.2011.07.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Brown G, Mangan D, Miskelly I, Moody TS. A Facile Stereoselective Biocatalytic Route to the Precursor of Woody Acetate. Org Process Res Dev 2011. [DOI: 10.1021/op200166a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Gareth Brown
- Biocatalysis Group, Almac, David Keir Building, Stranmillis Road, Belfast BT9 5AG, Northern Ireland
| | - David Mangan
- Biocatalysis Group, Almac, David Keir Building, Stranmillis Road, Belfast BT9 5AG, Northern Ireland
| | - Iain Miskelly
- Biocatalysis Group, Almac, David Keir Building, Stranmillis Road, Belfast BT9 5AG, Northern Ireland
| | - Thomas S. Moody
- Biocatalysis Group, Almac, David Keir Building, Stranmillis Road, Belfast BT9 5AG, Northern Ireland
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Effect of ionic liquid-containing system on betulinic acid production from betulin biotransformation by cultured Armillaria luteo-virens Sacc cells. Eur Food Res Technol 2011. [DOI: 10.1007/s00217-011-1549-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Musa MM, Phillips RS. Recent advances in alcohol dehydrogenase-catalyzed asymmetric production of hydrophobic alcohols. Catal Sci Technol 2011. [DOI: 10.1039/c1cy00160d] [Citation(s) in RCA: 99] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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He DM, Kaleem I, Qin SY, Dai DZ, Liu GY, Li C. Biosynthesis of glycyrrhetic acid 3-O-mono-β-d-glucuronide catalyzed by β-d-glucuronidase with enhanced bond selectivity in an ionic liquid/buffer biphasic system. Process Biochem 2010. [DOI: 10.1016/j.procbio.2010.03.015] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Moniruzzaman M, Kamiya N, Goto M. Activation and stabilization of enzymes in ionic liquids. Org Biomol Chem 2010; 8:2887-99. [PMID: 20445940 DOI: 10.1039/b926130c] [Citation(s) in RCA: 146] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
As environmentally benign "green" solvents, room temperature ionic liquids (ILs) have been used as solvents or (co)solvents in biocatalytic reactions and processes for a decade. The technological utility of enzymes can be enhanced greatly by their use in ionic liquids (ILs) rather than in conventional organic solvents or in their natural aqueous reaction media. In fact, the combination of green properties and unique tailor-made physicochemical properties make ILs excellent non-aqueous solvents for enzymatic catalysis with numerous advantages over other solvents, including high conversion rates, high selectivity, better enzyme stability, as well as better recoverability and recyclability. However, in many cases, particularly in hydrophilic ILs, enzymes show relative instability and/or lower activity compared with conventional solvents. To improve the enzyme activity as well as stability in ILs, various attempts have been made by modifying the form of the enzymes. Examples are enzyme immobilization onto support materials via adsorption or multipoint attachment, lyophilization in the presence of stabilizing agents, chemical modification with stabilizing agents, formation of cross-linked enzyme aggregates, pretreatment with polar organic solvents or enzymes combined with suitable surfactants to form microemulsions. The use of these enzyme preparations in ILs can dramatically increase the solvent tolerance, enhance activity as well as stability, and improve enantioselectivity. This perspective highlights a number of pronounced strategies being used successfully for activation and stabilization of enzymes in non-aqueous ILs media. This review is not intended to be comprehensive, but rather to present a general overview of the potential approaches to activate enzymes for diverse enzymatic processes and biotransformations in ILs.
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Affiliation(s)
- Muhammad Moniruzzaman
- Department of Applied Chemistry, Graduate School of Engineering, Kyushu University, 744 Moto-oka, Fukuoka 819-0395, Japan
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Moniruzzaman M, Nakashima K, Kamiya N, Goto M. Recent advances of enzymatic reactions in ionic liquids. Biochem Eng J 2010. [DOI: 10.1016/j.bej.2009.10.002] [Citation(s) in RCA: 291] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Nakata Y, Fukae T, Kanamori R, Kanamaru S, Matsuda T. Purification and characterization of acetophenone reductase with excellent enantioselectivity from Geotrichum candidum NBRC 4597. Appl Microbiol Biotechnol 2009; 86:625-31. [DOI: 10.1007/s00253-009-2329-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2009] [Revised: 10/22/2009] [Accepted: 10/24/2009] [Indexed: 10/20/2022]
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Lou WY, Chen L, Zhang BB, Smith TJ, Zong MH. Using a water-immiscible ionic liquid to improve asymmetric reduction of 4-(trimethylsilyl)-3-butyn-2-one catalyzed by immobilized Candida parapsilosis CCTCC M203011 cells. BMC Biotechnol 2009; 9:90. [PMID: 19849833 PMCID: PMC2790445 DOI: 10.1186/1472-6750-9-90] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2009] [Accepted: 10/22/2009] [Indexed: 12/02/2022] Open
Abstract
Background Whole cells are usually employed for biocatalytic reduction reactions to ensure efficient coenzyme regeneration and to avoid problems with enzyme purification and stability. The efficiency of whole cell-catalyzed bioreduction is frequently restricted by pronounced toxicity of substrate and/or product to the microbial cells and in many instances the use of two-phase reaction systems can solve such problems. Therefore, we developed new, biphasic reaction systems with biocompatible water-immiscible ionic liquids (ILs) as alternatives to conventional organic solvents, in order to improve the asymmetric reduction of 4-(trimethylsilyl)-3-butyn-2-one (TMSB) to (S)-4-(trimethylsilyl)-3-butyn-2-ol {(S)-TMSBOL}, a key intermediate for synthesis of 5-lipoxygenase inhibitors, using immobilized Candida parapsilosis CCTCC M203011 cells as the biocatalyst. Results Various ILs exerted significant but different effects on the bioreduction. Of all the tested water-immiscible ILs, the best results were observed with 1-butyl-3-methylimidazolium hexafluorophosphate (C4MIM·PF6), which exhibited not only good biocompatibility with the cells but also excellent solvent properties for the toxic substrate and product, thus markedly improving the efficiency of the bioreduction and the operational stability of the cells as compared to the IL-free aqueous system. 2-Propanol was shown to be the most suitable co-substrate for coenzyme regeneration, and it was found that the optimum volume ratio of buffer to C4MIM·PF6, substrate concentration, buffer pH, 2-propanol concentration and reaction temperature were 4/1 (v/v), 24 mM, 5.5, 130 mM and 30°C, respectively. Under these optimized conditions, the maximum yield and the product e.e. wer 97.7% and >99%, respectively, which are much higher than the corresponding values previously reported. The efficient whole-cell biocatalytic process was shown to be feasible on a 250-mL scale. Conclusion The whole cell-catalyzed asymmetric reduction of TMSB to (S)-TMSBOL can be substantially improved by using a C4MIM·PF6/buffer biphasic system instead of a single-phase aqueous system and the resulting biocatalytic process appears to be effective and competitive on a preparative scale.
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Affiliation(s)
- Wen-Yong Lou
- State Key Laboratory of Pulp and Paper Engineering, College of Light Industry & Food Sciences, South China University of Technology, Guangzhou 510640, PR China.
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Bräutigam S, Dennewald D, Schürmann M, Lutje-Spelberg J, Pitner WR, Weuster-Botz D. Whole-cell biocatalysis: Evaluation of new hydrophobic ionic liquids for efficient asymmetric reduction of prochiral ketones. Enzyme Microb Technol 2009. [DOI: 10.1016/j.enzmictec.2009.06.015] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Iwai N, Tanaka T, Kitazume T. Utility of ionic liquid for improvement of fluorination reaction with immobilized fluorinase. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.molcatb.2009.02.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Ravía SP, Carrera I, Seoane GA, Vero S, Gamenara D. Novel fungi-catalyzed reduction of α-alkyl-β-keto esters. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2009.05.031] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Tanaka T, Iwai N, Matsuda T, Kitazume T. Utility of ionic liquid for Geotrichum candidum-catalyzed synthesis of optically active alcohols. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.molcatb.2008.07.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Matsuda T, Yamanaka R, Nakamura K. Recent progress in biocatalysis for asymmetric oxidation and reduction. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2008.12.035] [Citation(s) in RCA: 269] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Wang W, Zong MH, Lou WY. Use of an ionic liquid to improve asymmetric reduction of 4′-methoxyacetophenone catalyzed by immobilized Rhodotorula sp. AS2.2241 cells. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.molcatb.2008.05.010] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Wallner SR, Lavandera I, Mayer SF, Öhrlein R, Hafner A, Edegger K, Faber K, Kroutil W. Stereoselective anti-Prelog reduction of ketones by whole cells of Comamonas testosteroni in a ‘substrate-coupled’ approach. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.molcatb.2008.02.009] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Asymmetric reduction of ketones by Geotrichum candidum: immobilization and application to reactions using supercritical carbon dioxide. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.tetasy.2008.09.018] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Lavandera I, Höller B, Kern A, Ellmer U, Glieder A, de Wildeman S, Kroutil W. Asymmetric anti-Prelog reduction of ketones catalysed by Paracoccus pantotrophus and Comamonas sp. cells via hydrogen transfer. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.tetasy.2008.08.005] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Zhang BB, Lou WY, Zong MH, Wu H. Efficient synthesis of enantiopure (S)-4-(trimethylsilyl)-3-butyn-2-ol via asymmetric reduction of 4-(trimethylsilyl)-3-butyn-2-one with immobilized Candida parapsilosis CCTCC M203011 cells. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/j.molcatb.2007.12.018] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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