Role of lignin and thermophilic lignocellulolytic bacteria in the evolution of humification indices and enzymatic activities during compost production

Phage lysate can regulate the humification process of composting

Phages play a crucial role in orchestrating top-down control within microbial communities, influencing the dynamics of the composting process. Despite this, the impact of phage-induced thermophilic bacterial lysis on humification remains ambiguous. This study investigates the effects of phage lysate, derived explicitly from Geobacillus subterraneus, on simulated composting, employing ultrahigh-resolution mass spectrometry and 16S rRNA sequencing techniques. The results show the significant role of phage lysate in expediting humus formation over 40 days. Notably, the rapid transformation of protein-like precursors released from phage-induced lysis of the host bacterium resulted in a 14.8 % increase in the proportion of lignins/CRAM-like molecules. Furthermore, the phage lysate orchestrated a succession in bacterial communities, leading to the enrichment of core microbes, exemplified by the prevalence of Geobacillus. Through network analysis, it was revealed that these enriched microbes exhibit a capacity to convert protein and lignin into essential building blocks such as amino acids and phenols. Subsequently, these components were polymerized into humus, aligning with the phenol-protein theory. These findings enhance our understanding of the intricate microbial interactions during composting and provide a scientific foundation for developing engineering-ready composting humification regulation technologies.

Biochar improves the humification process during pig manure composting: Insights into roles of the bacterial community and metabolic functions

Biochar could promote humification in composting, nevertheless, its mechanism has not been fully explored from the perspective of the overall bacterial community and its metabolism. This study investigated the effects of bamboo charcoal (BC) and wheat straw biochar (WSB) on the humic acid (HA) and fulvic acid (FA) contents during pig manure composting. The results showed that BC enhanced humification more than WSB, and significantly increased the HA content and HA/FA ratio. The bacterial community structure under BC differed from those under the other treatments, and BC increased the abundance of bacteria associated with the transformation of organic matter compared with the other treatments. Furthermore, biochar enhanced the metabolism of carbohydrates and amino acids in the thermophilic and cooling phases, especially BC. Through Mantel tests and network analysis, we found that HA was mainly related to carbon source metabolism and the bacterial community, and BC might change the interaction patterns among carbohydrates, amino acid metabolism, Bacillales, Clostridiales, and Lactobacillales with HA and FA to improve the humification process during composting. These results are important for understanding the mechanisms associated with the effects of biochar on humification during composting.

Effects of composts obtained from hazelnut wastes on the cultivation of pepper (Capsicum annuum) seedlings

Mixing animal waste and agricultural waste in certain proportions forms agricultural compost through appropriate air, time, and water supply. One of their use areas is directly used as fertilizer, and the other one is used as a material that can partially or completely replace P (peat) in the PGM (plant growth media). In this study, the initial mixtures with an appropriate C/N ratio and moisture content, which were created by mixing cow manure, chicken manure, hazelnut husk, hazelnut pruning wastes, vegetable and fruit wastes, and dry leaves, were composted for 180 days. The physicochemical properties of the mature composts were determined. Their effects on the fruit yield (weight of fruits) and plant height of pepper seedlings were evaluated in pot and field experiments. N (nitrogen), P (phosphorus), Cu (copper), and Zn (zinc) content were the highest in C4 (2.59%, 1.12%, 83.11 mg/kg, and 605.3 mg/kg). K (potassium) and Mn (manganese) content in C3 (1.79% and 750.5 mg/kg) and Fe (iron) content in C1 (4025 mg/kg) were determined to be the highest. There was no phytotoxic effect of all composts on Lepidium sativum seeds. Except for pH and organic matter, C1 45%, C1 20%, C4 45%, C4 20%, and P 90% met the requirements for ideal media. The mean height of eight-week seedlings increased in media of C1 20%, C1 45%, C2 20%, C2 45%, and C4 20%, but decreased in media of C3 90%. In field studies, while the highest yield was determined in C3 as 1530 g/plant, the lowest yield was 765.5 g/plant in control. The highest mean height was observed in C3 at 76.33 cm; the lowest was 63.03 cm in control.

Composting of post-consumption food waste enhanced by bioaugmentation with microbial consortium

There is escalating interest in composting of post-consumption food waste (PCFW) to recycle nutrients and mitigate pollution by inappropriate disposal. The present study aimed to evaluate the performance of bioaugmentation to composting of PCFW, which is in difficulties caused by high sugar, protein and gross lipid content. Inoculation of the microbial consortium effectively induced rapid temperature and pH rising, which led to OM reduction rate at 25.11 % and maturity at 150 % in terms of Germination Index value. EEMs-FRI showed that humification was accelerated in the thermophilic stage and further improved in the mature stage. Bacterial community analysis revealed that microbial inoculant ameliorated acidification, and expedited temperature and pH rising in the initial stage, which in turn accelerated bacteria community succession. The abundance of Actinobacteria was much higher in the thermophilic and mature stage in T2 treatment than in T1, which might explain rapid organic degradation. High temperature enriched thermophilic genera (Thermobifida, Compostibacillus, Neobacillus), and Pseudonocardia and Actinoplanes were enriched in the mature stage, which correlated to effective degradation of organic matter, humification and maturity. Temperature and pH mainly motivated bacterial succession. The results suggest that bioaugmentation is a favorable approach for efficient composting of PCFW.

Exploitation of cellulose degrading bacteria in bioconversion of agro-wastes

The issue of solid waste management has become worse as a result of rapid demographic growth and rising urbanisation. Therefore economical, efficient and quick yielding techniques are essential. In this study, composting of agro-wastes i.e., paddy straw, maize stover and vegetable waste with three strains of cellulolytic bacteria (CBC9, CBD4 and CBG2) was performed. The results showed that the C:N ratio of matured compost produced from bacterial inoculation ranged from 14-17:1, nitrification index (NI) ranged from 0.35 to 0.45, Cation exchange capacity (CEC) ranged from 76 to 88 cmol (P+) kg-1, whereas, total N, P and K content of composts increased by 75-127 %, 20-175% and 42-94%, respectively. The recovery of compost was highest in case of paddy straw compost (39%) produced from CBG2 inoculation which was followed by vegetable waste (38%) and maize stover compost (36%) produced from same bacterial inoculation. FT-IR, SEM and EDS studies suggested that final compost produced from inoculation of bacterial strain was more stabilized as compared to un-inoculated control, characterized by a decrease in aliphatic materials and an increase in aromatic groups, presumably related to bio-synthesis of humic substance.

Bacillus licheniformis inoculation promoted humification process for kitchen waste composting: Organic components transformation and bacterial metabolic mechanism

Kitchen waste (KW) composting always has trouble with slow humification process and low humification degree. The objective of this study was to develop potentially efficient solutions to improve the humification of KW composting, accelerate the humus synthesis and produce HS with a high polymerization degree. The impact of Bacillus licheniformis inoculation on the transformation of organic components, humus synthesis, and bacterial metabolic pathways in kitchen waste composting, was investigated. Results revealed that microbial inoculation promoted the degradation of organic constituents, especially readily degradable carbohydrates during the heating phase and lignocellulose fractions during the cooling phase. Inoculation facilitated the production and conversion of polyphenol, reducing sugar, and amino acids, leading to an increase of 20% in the content of humic acid compared to the control. High-throughput sequencing and network analysis indicated inoculation enriched the presence of Bacillus, Lactobacillus, and Streptomyces during the heating phase, while suppressing the abundance of Pseudomonas and Oceanobacillus, enhancing positive microbial interactions. PICRUSt2 analysis suggested inoculation enhanced the metabolism of carbohydrates and amino acids, promoting the polyphenol humification pathway and facilitating the formation of humus. These findings provide insights for optimizing the humification process of kitchen waste composting by microbial inoculation.

Identifying the role of array electrodes in improving the compost quality of food waste during electric field-assisted aerobic composting

Low composting temperature and long maturation periods are two major problems during food waste composting. In this study, a novel array-based electric field-assisted aerobic composting (Pin-EAC) process was tested on food waste compost. Pin-EAC increase the composting temperature to 69.3 °C, and improved the germination index by 15%. The Pin-EAC took at least 40% less time to reach the standard compost maturity. The fluorescent spectroscopy results showed that Pin-EAC could increase humic acid and fulvic acid by 33% and 37%, respectively. Pin-EAC could increase the diversity of thermophilic bacteria during composting. The co-occurrence network shown that Pin-EAC are more closely related to oxygen and temperature. This work has initially shown that the use of an electric field could improve food waste composting quality, suggesting that the Pin-EAC process is an effective strategy for high-water and high-oil organic solid waste aerobic composting.

DOM accumulation in the hyporheic zone promotes geogenic Fe mobility: A laboratory column study

Hyporheic zone (HZ) systems have a natural purification capacity, and they are commonly used to provide high quality drinking water. However, the presence of organic contaminants in HZ systems in anaerobic environments causes the aquifer sediments to release metals (e.g., Fe) at levels above drinking water standards, which affects the quality of groundwater. In this study, the effects of typical organic pollutants (dissolved organic matter (DOM)) on Fe release from anaerobic HZ sediments were investigated. Ultraviolet fluorescence spectroscopy, three-dimensional excitation-emission matrix fluorescence spectroscopy, excitation-emission matrix spectroscopy coupled with parallel factor analysis and Illumina MiSeq high-throughput sequencing were used to determine the effects of the system conditions on Fe release from HZ sediments. Compared with the control conditions (low traffic and low DOM as a baseline), the Fe release capacity was enhanced by 26.7 % and 64.4 % at low flow rate (85.8 m/d) and high organic matter concentration (1200 mg/L), which was consistent with the residence-time effect. The transport of heavy metals under different system conditions varied with the influent organic composition. The influent organic matter composition and fluorescence parameters (the humification index, biological index and fluorescence index) were closely related to the release of the Fe effluent, while these factors had less influence on Mn and As. From 16S rRNA analysis of the aquifer media at different depths at the end of the experiment, under low flow rate and high influent concentration conditions, reduction of Fe minerals by Proteobacteria, Actinobacteriota, Bacillus, and Acidobacteria promoted the release of Fe. These functional microbes play an active role in the Fe biogeochemical cycle in addition to reducing Fe minerals to promote Fe release. In summary, this study reveals the effects of the flow rate and influent DOM concentration on the release and biogeochemistry of Fe in the HZ. The results presented herein will contribute to a better understanding of the release and transport of common groundwater contaminants in the HZ and other groundwater recharge environments.

Effect of inoculating thermophilic bacterial consortia on compost efficiency and quality

The objective of this study was to investigate the potential effects of thermophilic bacterial consortia on compost efficiency and quality. The application of bacterial consortia resulted in an earlier onset of the thermophilic period (THP), an increased upper temperature limit, and an extended duration of the THP by 3-5 days compared to the control group (CK). Microbial inoculation significantly improved the efficiency of organic matter degradation, as well as the content of water-soluble nitrogen (WSN) and humic acid-carbon (HAC). In the case of consortium Ⅱ inoculation (T2), the activities of cellobiohydrolase, β-glucosidase, and protease were increased by 81.81 %, 70.13 %, and 74.09 % at the THP respectively compared to CK. During the maturation stage, T2 also exhibited the highest PV, n/PIII, n value (1.33) and HAC content (39.53 mg·g-1), indicating that inoculation of consortium Ⅱ effectively promoted substrate maturity and product quality. Moreover, this inoculation effectively optimized the bacterial communities, particularly the growth of Planococcus, Chelatococcus, and Chelativorans during the composting, which were involved in carbon and nitrogen conversion or HAC synthesis. Carbohydrate and amino acid metabolism, and membrane transport were predominant in the consortia-inoculated samples, with an increased gene abundance, suggesting that inoculation contributed to promoting the biodegradation of lignocellulose and the exchange of favorable factors. In conclusion, this study demonstrates that inoculating thermophilic bacterial consortia has a positive impact on enhancing the resource utilization efficiency of agricultural waste and improving the quality of compost products.

Bioactive Metabolites from Terrestrial and Marine Actinomycetes

Actinomycetes inhabit both terrestrial and marine ecosystems and are highly proficient in producing a wide range of natural products with diverse biological functions, including antitumor, immunosuppressive, antimicrobial, and antiviral activities. In this review, we delve into the life cycle, ecology, taxonomy, and classification of actinomycetes, as well as their varied bioactive metabolites recently discovered between 2015 and 2023. Additionally, we explore promising strategies to unveil and investigate new bioactive metabolites, encompassing genome mining, activation of silent genes through signal molecules, and co-cultivation approaches. By presenting this comprehensive and up-to-date review, we hope to offer a potential solution to uncover novel bioactive compounds with essential activities.

Pharmaceutical active compounds in sewage sludge: Degradation improvement and conversion into an organic amendment by bioaugmentation-composting processes

Around 143,000 chemicals find their fate in wastewater treatment plants in the European Union. Low efficiency on their removal at lab-based studies and even poorer performance at large scale experiments have been reported. Here, a coupled biological technology (bioaugmentation and composting) is proposed and proved for pharmaceutical active compounds degradation and toxicity reduction. The optimization was conducted through in situ inoculation of Penicillium oxalicum XD 3.1 and an enriched consortium (obtained from non-digested sewage sludge), into pilot scale piles of sewage sludge under real conditions. This bioaugmentation-composting system allowed a better performance of micropollutants degradation (21 % from the total pharmaceuticals detected at the beginning of the experiment) than a traditional composting process. Particularly, inoculation with P. oxalicum allowed the degradation of some recalcitrant compounds like carbamazepine, cotinine and methadone, and also produced better stabilization features in the mature compost (significant passivation of copper and zinc, higher macronutrients value, adequate physicochemical conditions for soil direct application and less toxic effect on germination) compared to the control and the enriched culture. These findings provide a feasible, alternative strategy to obtain a safer mature compost and a better removal of micropollutants performance at large scale.

Investigation of underlying links between nitrogen transformation and microorganisms' network modularity in the novel static aerobic composting of dairy manure by "stepwise verification interaction analysis"

Conventional composting is a viable method treating agricultural solid waste, and microorganisms and nitrogen transformation are the two major components of this proces. Unfortunately, conventional composting is time-consuming and laborious, and limited efforts have been made to mitigate these problems. Herein, a novel static aerobic composting technology (NSACT) was developed and employed for the composting of cow manure and rice straw mixtures. During the composting process, physicochemical parameters were analyzed to evaluate the quality of compost products, and microbial abundance dynamics were determined using high-throughput sequencing technique. The results showed that NSACT achieved compost maturity within 17 days as the thermophilic stage (≥55 °C) lasted for 11 days. GI, pH, and C/N were 98.71 %, 8.38, and 19.67 in the top layer, 92.32 %, 8.24, and 22.38 in the middle layer, 102.08 %, 8.33, and 19.95 in the bottom layer. These observations indicate compost products maturated and met the requirements of current legislation. Compared with fungi, bacterial communities dominated NSACT composting system. Based on the stepwise verification interaction analysis (SVIA), the novel combination utilization of multiple statistical analyses (Spearman, RDA/CCA, Network modularity, and Path analyses), bacterial genera Norank Anaerolineaceae (-0.9279*), norank Gemmatimonadetes (1.1959*), norank Acidobacteria (0.6137**) and unclassified Proteobacteria (-0.7998*), and fungi genera Myriococcum thermophilum (-0.0445), unclassified Sordariales (-0.0828*), unclassified Lasiosphaeriaceae (-0.4174**), and Coprinopsis calospora (-0.3453*) were the identified key microbial taxa affecting NH₄⁺-N, NO₃^--N, TKN and C/N transformation in the NSACT composting matrix respectively. This work revealed that NSACT successfully managed cow manure-rice straw wastes and significantly shorten the composting period. Interestingly, most microorganisms observed in this composting matrix acted in a synergistic manner, promoting nitrogen transformation.

Exploring gaseous emissions and pivotal enzymatic activity during co-composting of branch and pig manure: the effect of particle size of bulking agents

The purpose of current study was to probe the effect of various length of branch on gaseous emissions and vital enzymatic activity. Four lengths (<2 cm, 2 cm, 5 cm, and 10 cm) of clipped branch were mingled with collected pig manure for 100 days aerobic fermentation. The consequence demonstrated that the amendment of 2 cm of branch showed conducive to decline the greenhouse gas emissions, which the CH₄ emissions decreased by 1.62-40.10%, and the N₂O emissions decreased by 21.91-34.04% contrasted with other treatments. Furthermore, the peak degree of enzymatic activities was also observed in 2 cm of branch treatment by the optimizing living condition for microbes. In view of microbiological indicators, the most abundant and complex bacterial community could be monitor in 2 cm of branch composting pile, which verified the microbial facilitation. Summing up, the strategy of 2 cm branch amendment would be recommended.

High oil content inhibits humification in food waste composting by affecting microbial community succession and organic matter degradation

Composting is an effective technology to realize resource utilization of food waste in rural China. However, high oil content in food waste limits composting humification. This study investigated the effects of blended plant oil addition at different proportions (0, 10, 20, and 30%) on the humification of food waste composting. Oil addition at 10%-20% enhanced lignocellulose degradation by 16.6%-20.8% and promoted humus formation. In contrast, the high proportion of oil (30%) decreased the pH, increased the electrical conductivity, and reduced the seed germination index to 64.9%. High-throughput sequencing showed that high oil inhibited the growth and reproduction of bacteria (Bacillus, Fodinicurvataceae, and Methylococcaceae) and fungi (Aspergillus), attenuated their interaction, thus, reducing the conversion of organic matter, such as lignocellulose, fat, and total sugar, to humus, consequently leading to negative impacts on composting humification. The results can guide composting parameter optimization and improve effective management of rural food waste.

Changes of bacterial and fungal communities and relationship between keystone taxon and physicochemical factors during dairy manure ectopic fermentation

BACKGROUND

Due to interactions with variety of environmental and physicochemical factors, the composition and diversity of bacteria and fungi in manure ectopic fermentation are constantly changing. The purpose of this study was to investigated bacterial and fungal changes in dairy manure ectopic fermentation, as well as the relationships between keystone species and physicochemical characteristics.

METHODS

Ectopic fermentation was carried out for 93 days using mattress materials, which was combined with rice husk and rice chaff (6:4, v/v), and dairy waste mixed with manure and sewage. Physicochemical characteristics (moisture content, pH, NH4+-N (NN), total organic carbon (TO), total nitrogen (TN) and the C/N ratio) of ectopic fermentation samples were measured, as well as enzymatic activity (cellulose, urease, dehydrogenase and alkaline phosphatase). Furthermore, the bacterial and fungal communities were studied using 16S rRNA and 18S rRNA gene sequencing, as well as network properties and keystone species were analyzed.

RESULTS

During the ectopic fermentation, the main pathogenic bacteria reduced while fecal coliform increased. The C/N ratio gradually decreased, whereas cellulase and dehydrogenase remained at lower levels beyond day 65, indicating fermentation maturity and stability. During fermentation, the dominant phyla were Chloroflexi, Firmicutes, Proteobacteria, Bacteroidetes, and Actinobacteria of bacteria, and Ascomycota of fungi, while bacterial and fungal community diversity changed dramatically and inversely. The association between physicochemical characteristics and community keystone taxon was examined, and C/N ratio was negative associated to keystone genus.

CONCLUSION

These data indicated that microbial composition and diversity interacted with fermentation environment and parameters, while regulation of keystone species management of physicochemical factors might lead to improved maturation rate and quality during dairy manure ectopic fermentation. These findings provide a reference to enhance the quality and efficiency of waste management on dairy farm.

Large Semi-Membrane Covered Composting System Improves the Spatial Homogeneity and Efficiency of Fermentation

Homogenous spatial distribution of fermentation characteristics, local anaerobic conditions, and large amounts of greenhouse gas (GHGs) emissions are common problems in large-scale aerobic composting systems. The aim of this study was to examine the effects of a semi-membrane covering on the spatial homogeneity and efficiency of fermentation in aerobic composting systems. In the covered group, the pile was covered with a semi-membrane, while in the non-covered group (control group), the pile was uncovered. The covered group entered the high-temperature period earlier and the spatial gradient difference in the group was smaller compared with the non-covered group. The moisture content loss ratio (5.91%) in the covered group was slower than that in the non-covered group (10.78%), and the covered group had a more homogeneous spatial distribution of water. The degradation rate of organic matter in the non-covered group (11.39%) was faster than that in the covered group (10.21%). The final germination index in the covered group (85.82%) was higher than that of the non-covered group (82.79%) and the spatial gradient difference in the covered group was smaller. Compared with the non-covered group, the oxygen consumption rate in the covered group was higher. The GHG emissions (by 30.36%) and power consumption in the covered group were reduced more significantly. The spatial microbial diversity of the non-covered group was greater compared with the covered group. This work shows that aerobic compost covered with a semi-membrane can improve the space homogeneity and efficiency of fermentation.

Exploring the dynamic of microbial community and metabolic function in food waste composting amended with traditional Chinese medicine residues

The aim of this study was to explore the dynamic of microbial community and metabolic function in food waste composting amended with traditional Chinese medicine residues (TCMRs). Results suggested that TCMRs addition at up to 10% leads to a higher peak temperature (60.5 °C), germination index (GI) value (119.26%), and a greater reduction in total organic carbon (TOC) content (8.08%). 10% TCMRs significantly induced the fluctuation of bacterial community composition, as well as the fungal community in the thermophilic phase. The addition of 10% TCMRs enhanced the abundance of bacterial genera such as Acetobacter, Bacillus, and Brevundimonas, as well as fungal genera such as Chaetomium, Thermascus, and Coprinopsis, which accelerated lignocellulose degradation and humification degree. Conversely, the growth of Lactobacillus and Pseudomonas was inhibited by 10% TCMRs to weaken the acidic environment and reduce nitrogen loss. Metabolic function analysis revealed that 10% TCMRs promoted the metabolism of carbohydrate and amino acid, especially citrate cycle, glycolysis/gluconeogenesis, and cysteine and methionine metabolism. Redundancy analysis showed that the carbon to nitrogen (C/N) ratio was the most significant environmental factor influencing the dynamic of bacterial and fungal communities.

Improving kitchen waste composting maturity by optimizing the processing parameters based on machine learning model

As a novel analytical method based on big data, machine learning model can explore the relationship between different parameters and draw universal conclusions, which was used to predict composting maturity and identify key parameters in this study. The results showed that the Stacking model exhibited excellent prediction accuracy. SHapley Additive exPlanations (SHAP) and Partial Dependence Analysis (PDA) were performed to evaluate the importance of different parameters as well as their optimal interval. Optimal starting conditions should be maintained in the mesophilic state (temperature: 30-45℃, moisture content: 55-65%, pH: 6.3-8.0), and nutrients (total nitrogen > 2.3%, total organic carbon > 35%) should be adjusted in the thermophilic state. Experiments revealed that model-based optimization strategies could improve composting maturity because they could optimize compost microbial flora and perform complex carbon cycle functions. In conclusion, this study provides new insights into the enhancement of the composting process.

Predicting the humification degree of multiple organic solid waste during composting using a designated bacterial community

Microbes are the drivers for disposing of organic solid waste (OSW) during aerobic fermentation. Notwithstanding, the significance of microbes is underestimated in numerous studies on aerobic fermentation product assessments. Here, we investigated the humification degree (HD), and the humic acid content was assessed in terms of the bacterial community. The bacterial communities were useful indicators for making predictions and even correctly determined the categories of OSWs with 94% accuracy. The bacterial codes can also provide a better prediction of HD. Our results demonstrate that the bacteria code is a reliable biological method to assess HD effectively. Bacterial codes can be used as ecological and biological indicators to evaluate the quality of aerobic fermentation of different materials.

Comparison between cold plasma, ultrasonication, and alkaline hydrogen peroxide pretreatments of garden waste to enhance humification in subsequent composting with kitchen waste: Performance and mechanisms

This study compared the performance and mechanisms of cold plasma, ultrasonication, and alkali-assisted hydrogen peroxide for garden waste pretreatment to advance humification in composting with kitchen waste. High-throughput sequencing integrated with Functional Annotation of Prokaryotic Taxa was used to relate bacterial dynamics to humification. Results show that all pretreatment techniques accelerated humification by 37.5% - 45.7% during composting in comparison to the control treatment. Ultrasonication and alkalization preferred to decompose lignocellulose to produce humus precursors in garden waste, thereby facilitating humus formation at the beginning of composting. By contrast, cold plasma was much faster and simpler than other pretreatment techniques to effectively disrupt the surface structure and reduce the crystallinity of garden waste to enrich functional bacteria for aerobic chemoheterotrophy, xylanolysis, cellulolysis, and ligninolysis during composting. As such, a more robust bacterial community was developed after cold plasma pretreatment to advance humification at the mature stage of composting.

Lignocellulosics in plant cell wall and their potential biological degradation

Lignocellulosic materials are composed of three main structural polymers: hemicellulose, cellulose, and lignin. Cellulose is a long chain molecule of glucose requiring a small number of enzymes for degradation due to its simple structure while lignin is a complex polymer of phenylpropane making its biochemical decomposition difficult. Under anaerobic conditions, lignocellulose breakdown is much easier and more rapid than aerobic conditions. Various studies have been carried out to estimate the rate of degradation of lignocellulosic materials. Microorganisms play a key role in the degradation of lignocellulosic materials because they produce a variety of hydrolytic enzymes including cellulase, proteases, xylanases, lipases, laccase, and phosphatases during the degradation of lignocellulosic materials. Based on the body of literature, microorganismal activity can provide useful information about the process of organic matter decomposition.

Insights into the effect of iron-carbon particle amendment on food waste composting: Physicochemical properties and the microbial community

The effects of iron-carbon (Fe-C) particle amendment on organic matter degradation, product quality and functional microbial community in food waste composting were investigated. Fe-C particles (10%) were added to the material and composted for 32 days in a lab-scale composting system. The results suggested that Fe-C particle enhanced organic matter degradation by 12.3%, particularly lignocellulose, leading to a greater humification process (increased by 15.5%). In addition, NO₃^--N generation was enhanced (15.9%) by nitrification with more active ammonia monooxygenase and nitrite oxidoreductase activities in the cooling and maturity periods. Fe-C particles not only significantly increased the relative abundances of Bacillus and Aspergillus for organic matter decomposition, but also decreased the relative abundances of acid-producing bacteria. RDA analysis demonstrated that the bacterial community was significantly influenced by dissolved organic matter, C/N, NO₃^--N, humic acid, volatile fatty acids and pH, while electrical conductivity was the key factor affecting the fungal community.

Effects of Microbial Inoculation with Different Indigenous Bacillus Species on Physicochemical Characteristics and Bacterial Succession during Short-Term Composting

Bacillus accelerates lignocellulose degradation, promotes the stabilization and resource utilization of compost by secreting enzymes, and plays an important role in compost formation and quality control. This study evaluated enzyme activity, lignocellulosic degradation, and bacterial succession in composting inoculated with different microbial Bacillus agents. They were identified as B. licheniformis, B. subtilis, B. thermoamylovorans, B. thermoruber, and B. hisashii. Four treatments were established, including a CK (uninoculated microorganisms), A (B. licheniformis, B. subtilis, B. thermoamylovorans,and B. hisashii), B (B. subtilis, B. thermoamylovorans, B. thermoruber, and B. hisashii), and C (B. subtilis, B. thermoamylovorans, and B. hisashii), and the composting lasted 7–14 days. Lignin and cellulose degradation rates in B during composting were 17.1% and 36.7% at the cooling stage, respectively. Redundancy analysis showed that degradation of lignocellulose in the thermophilic stage was mainly related to the secretion of lignocellulose-degrading enzymes after microbial inoculation. 16S rRNA sequencing revealed that Bacillus (20.3%) and Thermobifida (20.2%) were the dominant genera. Inoculation with a combination including B. thermoruber was a feasible way to increase lignocellulose degradation and promote maturity in sewage sludge composting.

The Impacts of Black Soldier Fly Frass on Nitrogen Availability, Microbial Activities, C Sequestration, and Plant Growth

Using insects, notably black soldier fly (BSF), is becoming one of the emerging technologies to valorize agrifood waste into high-value products, such as proteins for animal feed. Its market is expected to grow more rapidly following the new European legislation extending larvae protein use in poultry farming. The anticipated increase in larvae protein also results in a parallel increase in frass, a residue leftover after rearing the larvae and selling as a biofertilizer. Little is known about the impacts of frass made from different feedstocks used for raising the larvae on plant growth and soil quality. We set up an incubation and pot experiment to understand their effect on plant growth and soil quality and tested seven frass fertilizers made from various types of food waste and anaerobic digestate and potato pulp as reference materials using maize as a test plant. We found that the effect of frass on N availability and soil microbial quality significantly (p &lt; 0.05) varied depending on the feedstock used for rearing the BSF larvae. N immobilization occurred up to more than 70 days, and 4–20% net N was released at the end of the 103-day-long experiment. In line with N availability dynamics, most of the frass treatments did not significantly increase the plant growth. All frasses significantly increased the microbial biomass C and enzyme activities. About 56–70% of the applied C in frass is estimated to be stable in the soil. Our data confirm that frass is a valuable product to improve soil quality but need to be applied with N sources that are readily available to avoid nutrient shortage during plant growth.

Paenibacillus artemisiicola sp. nov. and Paenibacillus lignilyticus sp. nov., two new endophytic bacterial species isolated from plant roots

Two Gram-positive, endospore-forming, rod-shaped bacterial strains designated MWE-103^T and DLE-14^T were isolated from plant roots. The 16S rRNA gene sequence analysis indicated that strain MWE-103^T was closely related to Paenibaillus sacheonensis SY01^T with a sequence similarity of 97.82 %, and strain DLE-14^T to Paenibacillus rhizoryzae IZS3-5^T with 99.09 % similarity. The orthologous average nucleotide identity and digital DNA-DNA hybridization values using whole genome data indicated that strains MWE-103^T and DLE-14^T could be readily distinguished from the mostly related species. Both strains grew at mesophilic temperature ranges, and grew best at pH 6 and in the absence of NaCl. The major fatty acid in both strains was anteiso-C_15 : 0, but their relative proportions differed. The predominant quinone of both strains was menaquinone 7, the cell-wall diamino acid was meso-diaminopimelic acid, and the diagnostic polar lipids were diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol, which were consistent with those of related species. Amylase and cellulase activities were positive for both strains. Strain DLE-14^T exhibited the potential for lignin degradation. The DNA G+C contents of strain MWE-103^T and DLE-14^T were 60.9 and 50.8 mol% respectively. The genomes of the two strains revealed potential plant-growth-promoting characteristics such as nitrogen fixation, siderophore production and phosphate solubilization. Based on phylogenetic and phenotypic evidence, strains MWE-103^T and DLE-14^T should each be recognized as a novel species of Paenibacillus, for which the names Paenibacillus artemisiicola sp. nov. (type strain: MWE-103^T=KCTC 43287^T=JCM 34503^T) and Paenibacillus lignilyticus sp. nov. (type strain: DLE-14^T=KCTC 43288^T=JCM 34504^T) are proposed.

Biochar regulates bacterial-fungal diversity and associated enzymatic activity during sheep manure composting

Aimed to evaluate the coexistence of bacterial and fungal diversity and their correlation with enzymatic activity in response to biochar. This study performed aerobic composting based on typical agricultural wastes of sheep manure with additive apple tree branch biochar at distinct concentration (0, 2.5, 5, 7.5, 10 and 12.5% corresponding from T1 to T6). The result demonstrated that appropriate amendment of biochar enriched bacterial diversity (1646-1686 OTUs) but interestingly decreased fungal diversity (542-630 OTUs) compared to control (1444 and 682 OTUs). Biochar addition enhanced all enzymatic activities and its correlation with bacterial was more complex than fungal community (786 and 359 connect edges). The dominant microbes comprised of Firmicutes (45.2-35.2%), Proteobacteria (14.0-17.5%), Basidiomycota (32.4-49.5%) and Ascomycota (11.3-37.5%) among all the treatments. Overall, biochar regulates the composting microenvironment by influencing the microbial diversity and associated enzymatic activities.

Hydrothermal pretreatment contributes to accelerate maturity during the composting of lignocellulosic solid wastes

The aim of this work was to study the optimal conditions and mechanism of lignocellulose degradation in the hydrothermal pretreatment coupled with aerobic fermentation (HTPAF). The optimized process parameters in the hydrothermal pretreatment (HTP) were discussed. The response relationship between enzyme activity and microbial community in HTPAF were explored. The results showed that with the moisture content of 50%-90%, the lignin content decreased by 150 mg/g after treatment at 120 °C for 6 h, and a loose pore structure was formed on the surface of the chestnut shells after HTP. The compost maturity time was shortened to 12 days. The dominant microbial genera in HTPAF were Gallicola, Moheibacter and Atopostipes, which were significant different with that of the traditional composting. HTPAF is beneficial to increase the maximum temperature of aerobic fermentation and quickly degrade lignin to shorten the maturity time.

Differences of Enzymatic Activity During Composting and Vermicomposting of Sewage Sludge Mixed With Straw Pellets

The study aims were focused on profiling eight hydrolytic enzymes by fluorescence method using a multifunctional modular reader and studying the proportion of basic microorganism groups during composting and vermicomposting of sewage sludge mixed with straw pellets in several proportions (0, 25, 50, 75, and 100%). The greatest decrease in enzymatic activity occurred in the first half of composting and vermicomposting. After 4 months of these processes, the least enzymatic activity was observed in the sludge with 50% and also 25% straw addition, indicating that straw is an important means for the rapid production of mature compost from sewage sludge. Enzymatic activity was usually less in the presence of earthworms than in the control treatment because some processes took place in the digestive tract of the earthworm. For the same reason, we observed reduced enzyme activity during fresh feedstock vermicomposting than precomposted material. The final vermicompost from fresh feedstocks exhibited less microbial biomass, and few fungi and G- bacteria compared to precomposted feedstock. The enzymatic activity during composting and vermicomposting of sewage sludge and their mixtures stabilized at the following values: β-D-glucosidase-50 μmol MUFG/h/g dw, acid phosphatase-200 μmol MUFP/h/g dw, arylsulphatase-10 μmol MUFS/h/g dw, lipase-1,000 μmol MUFY/h/g dw, chitinase-50 μmol MUFN/h/g dw, cellobiohydrolase-20 μmol MUFC/h/g dw, alanine aminopeptidase-50 μmol AMCA/h/g dw, and leucine aminopeptidase-50 μmol AMCL/h/g dw. At these and lesser values, these final products can be considered mature and stable.

Bacterial dynamics for gaseous emission and humification in bio-augmented composting of kitchen waste

Using high-throughput sequencing and Functional Annotation of Prokaryotic Taxa (FAPROTAX), this study aimed to elucidate the effect of bacterial dynamics on gaseous emission and humification of kitchen and garden wastes during composting augmented with microbial inoculants. Microbial inoculant addition at up to 0.9% resulted in a diverse bacterial community with more functional bacteria to amend gaseous emission and enhance humification. Microbial inoculation facilitated the enrichment of aerobic bacteria (e.g. the genus Bacillus and Thermobifida) to enhance cellulolysis and ligninolysis to advance organic humification. By contrast, several bacteria, such as the genus Weissella and Pusillimonas were inhibited by microbial inoculation to weaken fermentation and nitrate respiration. As such, bio-augmented composting with 0.9% microbial inoculant reduced the emission of methane by 11-20% and nitrogen oxide by 17-54%. On the other hand, ammonia and hydrogen sulphide emissions increased by 26-62% and 5-23%, respectively, in bio-augmented composting due to the considerable proliferation of the genus Bacillus and Desulfitibacter to enhance ammonification and sulphur-related respiration. Results from this study highlight the need to further develop efficient and multifunctional microbial inoculants that promote humification and deodorization for bio-augmented composting of kitchen waste as well as other carbon and nutrient rich organic wastes.

Study on the assessment of humification processes during biodegradation of heavy residual fuel oil

The aim of this study was to investigate the creation of humic substances during biodegradation of heavy residual fuel oil, because there are indications that substances similar to humic substances are generated during biodegradation of polycyclic aromatic hydrocarbons. In the study, which lasted for 110 days, biodegradation of heavy residual fuel oil was carried out in a layer of artificial soil substrate. The initial concentration of the total petroleum hydrocarbon in the prepared artificial soil substrate (biopile) was 23.1 g kg^-1 dry weight (d.w.). At the end of the process, the total petroleum hydrocarbons were reduced to 8.1 g kg^-1 d.w. in the inoculated biopile, while the content of humic acids increased during bioremediation from 3.15 g kg^-1 d.w. to 4.95 g kg^-1 d.w. The humic acids extracted from biopile during the biodegradation process were characterized by various chemical techniques (elemental analysis, spectrofluorimetric analysis, electrochemical measurements, and size exclusion chromatography). The results showed that levels of C, H and the H/C ratio decreased as the biodegradation process progressed. This indicated that humic acids aromatization process took place and this was confirmed by the spectrofluorimetric analysis. The increase of oxygen percentage and the O/C ratio in the humic acids after the biodegradation treatment indicated an increase in functional oxygen groups. Additional analyses of humic acids from the inoculated biopile showed that they were transformed during the bioremediation process. They had greater redox and buffering capacities and a larger portion of the fractions had high molecular mass. Also, the humification parameters (the C_HAs/C_FAs ratio and C_HAs/C_org ratio) increased during the biodegradation. This is one of the few studies that describes the generation of humic substances during the biodegradation of oil compounds.

Degradation of lignocelluloses in straw using AC-1, a thermophilic composite microbial system

In composting, the degradation of lignocellulose in straw is problematic due to its complex structures such as lignin. A common solution to this problem is the addition of exogenous inoculants. AC-1, a stable thermophilic microbial composite, was isolated from high temperature compost samples that can decompose lignocellulose at 50–70 °C. AC-1 had a best degradation efficiency of rice straw at 60 °C (78.92%), of hemicellulose, cellulose and lignin were 82.49%, 97.20% and 20.12%, respectively. It showed degrad-ability on both simple (filter paper, absorbent cotton) and complex (rice straw) cellulose materials. It produced acetic and formic acid during decomposition process and the pH had a trend of first downward then upward. High throughput sequencing revealed the main bacterial components of AC-1 were Tepidimicrobium, Haloplasma, norank-f-Limnochordaceae, Ruminiclostridium and Rhodothermus which provides major theoretical basis for further application of AC-1.

Bamboo charcoal enhances cellulase and urease activities during chicken manure composting: Roles of the bacterial community and metabolic functions

Microbial enzymes are crucial for material biotransformation during the composting process. In this study, we investigated the effects of adding bamboo charcoal (BC) (i.e., at 5%, 10%, and 20% corresponding to BC5, BC10, and BC20, respectively) on the enzyme activity levels during chicken manure composting. The results showed that BC10 could increase the cellulose and urease activities by 56% and 96%, respectively. The bacterial community structure in BC10 differed from those in the other treatments, and Luteivirga, Lactobacillus, Paenalcaligenes, Ulvibacter, Bacillus, Facklamia, Pelagibacterium, Sporosarcina, Cellvibrio, and Corynebacterium had the most important roles in composting. Compared with other treatments, BC10 significantly enhanced the average rates of degradation of carbohydrates (D-xylose (40%) and α-D-lactose (44%)) and amino acids (L-arginine (16%), L-asparagine (14%), and L-threonine (52%)). We also explored the associations among the bacterial community and their metabolic functions with the changes in the activities of enzymes. Network analysis demonstrated that BC10 altered the co-occurrence patterns of the bacterial communities, where Ulvibacter and class Bacilli were the keystone bacterial taxa with high capacities for degrading carbon source, and they were related to increases in the activities of cellulase and urease, respectively. The results obtained in this study may help to further enhance the efficiency of composting.