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Komarova BS, Novikova NS, Gerbst AG, Sinitsyna OA, Rubtsova EA, Kondratyeva EG, Sinitsyn AP, Nifantiev NE. Combination of 3- O-Levulinoyl and 6- O-Trifluorobenzoyl Groups Ensures α-Selectivity in Glucosylations: Synthesis of the Oligosaccharides Related to Aspergillus fumigatus α-(1 → 3)-d-Glucan. J Org Chem 2023; 88:12542-12564. [PMID: 37593939 DOI: 10.1021/acs.joc.3c01283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/19/2023]
Abstract
Stereospecific α-glucosylation of primary and secondary OH-group at carbohydrate acceptors is achieved using glucosyl N-phenyl-trifluoroacetimidate (PTFAI) donor protected with an electron-withdrawing 2,4,5-trifluorobenzoyl (TFB) group at O-6 and the participating levulinoyl (Lev) group at O-3. New factors have been revealed that might explain α-stereoselectivity in the case of TFB and pentafluorobenzoyl (PFB) groups at O-6. They are of conformational nature and confirmed by DFT calculations. The potential of this donor, as well as the orthogonality of TFB and Lev protecting groups, is showcased by the synthesis of α-(1 → 3)-linked pentaglucoside corresponding to Aspergillus fumigatus α-(1 → 3)-d-glucan and of its hexasaccharide derivative, bearing β-glucosamine residue at the non-reducing end.
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Affiliation(s)
- Bozhena S Komarova
- Laboratory of Glycoconjugate Chemistry, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russia
| | - Natalia S Novikova
- Laboratory of Glycoconjugate Chemistry, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russia
| | - Alexey G Gerbst
- Laboratory of Glycoconjugate Chemistry, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russia
| | - Olga A Sinitsyna
- Department of Chemistry, M.V. Lomonosov Moscow State University, Vorobyevy Gory 1-11, Moscow 119992, Russia
| | - Ekaterina A Rubtsova
- FRC "Fundamentals of Biotechnology", Russian Academy of Sciences, Leninsky prospect 33-2, Moscow 119071, Russia
| | - Elena G Kondratyeva
- FRC "Fundamentals of Biotechnology", Russian Academy of Sciences, Leninsky prospect 33-2, Moscow 119071, Russia
| | - Arkady P Sinitsyn
- Department of Chemistry, M.V. Lomonosov Moscow State University, Vorobyevy Gory 1-11, Moscow 119992, Russia
- FRC "Fundamentals of Biotechnology", Russian Academy of Sciences, Leninsky prospect 33-2, Moscow 119071, Russia
| | - Nikolay E Nifantiev
- Laboratory of Glycoconjugate Chemistry, N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russia
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2
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Pitre SP, Overman LE. Strategic Use of Visible-Light Photoredox Catalysis in Natural Product Synthesis. Chem Rev 2021; 122:1717-1751. [PMID: 34232019 DOI: 10.1021/acs.chemrev.1c00247] [Citation(s) in RCA: 105] [Impact Index Per Article: 35.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Recent progress in the development of photocatalytic reactions promoted by visible light is leading to a renaissance in the use of photochemistry in the construction of structurally elaborate organic molecules. Because of the rich functionality found in natural products, studies in natural product total synthesis provide useful insights into functional group compatibility of these new photocatalytic methods as well as their impact on synthetic strategy. In this review, we examine total syntheses published through the end of 2020 that employ a visible-light photoredox catalytic step. To assist someone interested in employing the photocatalytic steps discussed, the review is organized largely by the nature of the bond formed in the photocatalytic step.
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Affiliation(s)
- Spencer P Pitre
- Department of Chemistry, Oklahoma State University, Stillwater, Oklahoma 74078, United States
| | - Larry E Overman
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
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Matsuoka T, Inuki S, Miyagawa T, Oishi S, Ohno H. Total Synthesis of (+)-Polyoxamic Acid via Visible-Light-Mediated Photocatalytic β-Scission and 1,5-Hydrogen Atom Transfer of Glucose Derivative. J Org Chem 2020; 85:8271-8278. [PMID: 32425047 DOI: 10.1021/acs.joc.0c00910] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
A total synthesis of polyoxamic acid has been achieved. The key feature of the synthetic route is a visible-light-mediated β-scission and carbon-to-carbon 1,5-hydrogen atom transfer (1,5-HAT) to provide the functionalized alditol under mild conditions. This type of carbon-to-carbon 1,5-HAT initiated by C(sp3)-centered radicals has been scarcely reported. Furthermore, the reaction was adapted for flow chemistry, facilitating the total synthesis of polyoxamic acid.
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Affiliation(s)
- Takuro Matsuoka
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Shinsuke Inuki
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Takashi Miyagawa
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Shinya Oishi
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
| | - Hiroaki Ohno
- Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan
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Zhang Y, Zhou S, Wang X, Zhang H, Guo Z, Gao J. A new method for α-specific glucosylation and its application to the one-pot synthesis of a branched α-glucan. Org Chem Front 2019. [DOI: 10.1039/c8qo01177j] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
We have developed a new and highly efficient α-specific glucosylation method based on the synergistic α-directing effects of a TolSCl/AgOTf promoter system and the steric β-shielding or the remote participation of protecting groups at the donor 6-O-position.
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Affiliation(s)
- Yanxin Zhang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Shihao Zhou
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Xiaohan Wang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Han Zhang
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Zhongwu Guo
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
| | - Jian Gao
- National Glycoengineering Research Center
- Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology
- Shandong University
- Qingdao
- China
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5
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Affiliation(s)
- Michael Martin Nielsen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark
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6
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Komarova BS, Dorokhova VS, Tsvetkov YE, Nifantiev NE. Synthesis of a biotinylated penta-α-(1→6)-d-glucoside based on the rational design of an α-stereoselective glucosyl donor. Org Chem Front 2018. [DOI: 10.1039/c7qo01007a] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Rational design of a protecting group pattern in a glucosyl donor allows for the α-selective synthesis of biotinylated pentasaccharides corresponding to the fragment of the α-(1→6)-glucans of Helicobacter pylori.
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Affiliation(s)
- Bozhena S. Komarova
- Laboratory of Glycoconjugate Chemistry
- N.D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russia
| | - Vera S. Dorokhova
- Laboratory of Glycoconjugate Chemistry
- N.D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russia
| | - Yury E. Tsvetkov
- Laboratory of Glycoconjugate Chemistry
- N.D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russia
| | - Nikolay E. Nifantiev
- Laboratory of Glycoconjugate Chemistry
- N.D. Zelinsky Institute of Organic Chemistry
- Russian Academy of Sciences
- 119991 Moscow
- Russia
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Traboni S, Bedini E, Iadonisi A. Solvent-Free One-Pot Diversified Protection of Saccharide Polyols Via Regioselective Tritylations. ChemistrySelect 2017. [DOI: 10.1002/slct.201701033] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Serena Traboni
- Department of Chemical Sciences; University of Naples Federico II; Via Cinthia 4 I-80126 Naples Italy
| | - Emiliano Bedini
- Department of Chemical Sciences; University of Naples Federico II; Via Cinthia 4 I-80126 Naples Italy
| | - Alfonso Iadonisi
- Department of Chemical Sciences; University of Naples Federico II; Via Cinthia 4 I-80126 Naples Italy
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8
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van der Es D, Groenia NA, Laverde D, Overkleeft HS, Huebner J, van der Marel GA, Codée JDC. Synthesis of E. faecium wall teichoic acid fragments. Bioorg Med Chem 2016; 24:3893-3907. [PMID: 26993744 DOI: 10.1016/j.bmc.2016.03.019] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2016] [Revised: 03/07/2016] [Accepted: 03/08/2016] [Indexed: 10/22/2022]
Abstract
The first synthesis of different Enterococcus faecium wall teichoic acid (WTA) fragments is presented. The structure of these major cell wall components was elucidated recently and it was shown that these glycerolphosphate (GroP) based polymers are built up from -6-(GalNAc-α(1-3)-GalNAc-β(1-2)-GroP)- repeating units. We assembled WTA fragments up to three repeating units in length, in two series that differ in the stereochemistry of the glycerolphosphate moiety. The key GalNAc-GalNAc-GroP synthons, required for the synthesis, were generated from galactosazide building blocks that were employed in highly stereoselective glycosylation reactions to furnish both the α- and β-configured linkages. By comparing the NMR spectra of the synthesized fragments with the isolated material it appears that the hereto undefined stereochemistry of the glycerol phosphate moiety is sn-glycerol-3-phosphate. The generated fragments will be valuable tools to study their immunological activity at the molecular level.
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Affiliation(s)
- Daan van der Es
- Leiden Institute of Chemistry, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands
| | - Nadia A Groenia
- Leiden Institute of Chemistry, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands
| | - Diana Laverde
- Division of Pediatric Infectious Diseases, Dr. von Hauner Children's Hospital, Ludwig-Maximilians-University, Munich, Germany
| | - Herman S Overkleeft
- Leiden Institute of Chemistry, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands
| | - Johannes Huebner
- Division of Pediatric Infectious Diseases, Dr. von Hauner Children's Hospital, Ludwig-Maximilians-University, Munich, Germany
| | | | - Jeroen D C Codée
- Leiden Institute of Chemistry, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands.
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9
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Barroca-Aubry N, Benchekroun M, Gomes F, Bonnaffé D. p-Methoxybenzyl-N-phenyl-2,2,2-trifluoroacetimidate: a versatile reagent for mild acid catalyzed etherification. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.07.066] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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10
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Hogendorf W, Kropec A, Filippov D, Overkleeft H, Huebner J, van der Marel G, Codée J. Light fluorous synthesis of glucosylated glycerol teichoic acids. Carbohydr Res 2012; 356:142-51. [DOI: 10.1016/j.carres.2012.02.023] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2012] [Accepted: 02/24/2012] [Indexed: 01/08/2023]
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11
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Ohtani T, Sakai S, Takada A, Takahashi D, Toshima K. Efficient and Stereoselective Synthesis of the Disaccharide Fragment of Incednine. Org Lett 2011; 13:6126-9. [DOI: 10.1021/ol202639v] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Takashi Ohtani
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan
| | - Shohei Sakai
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan
| | - Akira Takada
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan
| | - Daisuke Takahashi
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan
| | - Kazunobu Toshima
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan
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12
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Walvoort MTC, Moggré GJ, Lodder G, Overkleeft HS, Codée JDC, van der Marel GA. Stereoselective Synthesis of 2,3-Diamino-2,3-dideoxy-β-d-mannopyranosyl Uronates. J Org Chem 2011; 76:7301-15. [DOI: 10.1021/jo201179p] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Marthe T. C. Walvoort
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Gert-Jan Moggré
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Gerrit Lodder
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Herman S. Overkleeft
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Jeroen D. C. Codée
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
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13
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Codée JD, Ali A, Overkleeft HS, van der Marel GA. Novel protecting groups in carbohydrate chemistry. CR CHIM 2011. [DOI: 10.1016/j.crci.2010.05.010] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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14
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Walvoort MTC, Lodder G, Overkleeft HS, Codée JDC, van der Marel GA. Mannosazide Methyl Uronate Donors. Glycosylating Properties and Use in the Construction of β-ManNAcA-Containing Oligosaccharides. J Org Chem 2010; 75:7990-8002. [DOI: 10.1021/jo101779v] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Marthe T. C. Walvoort
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Gerrit Lodder
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Herman S. Overkleeft
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Jeroen D. C. Codée
- Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
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15
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Walvoort MT, Dinkelaar J, van den Bos LJ, Lodder G, Overkleeft HS, Codée JD, van der Marel GA. The impact of oxacarbenium ion conformers on the stereochemical outcome of glycosylations. Carbohydr Res 2010; 345:1252-63. [DOI: 10.1016/j.carres.2010.02.027] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2010] [Revised: 02/23/2010] [Accepted: 02/25/2010] [Indexed: 10/19/2022]
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16
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Matsumura F, Tatsumi S, Oka N, Wada T. Rapid glycosylations under extremely mild acidic conditions. Use of ammonium salts to activate glycosyl phosphites via P-protonation. Carbohydr Res 2010; 345:1211-5. [DOI: 10.1016/j.carres.2010.03.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2009] [Revised: 02/16/2010] [Accepted: 03/10/2010] [Indexed: 11/26/2022]
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17
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Yu B, Sun J. Glycosylation with glycosyl N-phenyltrifluoroacetimidates (PTFAI) and a perspective of the future development of new glycosylation methods. Chem Commun (Camb) 2010; 46:4668-79. [DOI: 10.1039/c0cc00563k] [Citation(s) in RCA: 155] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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18
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Xue JL, Cecioni S, He L, Vidal S, Praly JP. Variations on the SnCl4 and CF3CO2Ag-promoted glycosidation of sugar acetates: a direct, versatile and apparently simple method with either α or β stereocontrol. Carbohydr Res 2009; 344:1646-53. [DOI: 10.1016/j.carres.2009.06.004] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2009] [Revised: 05/27/2009] [Accepted: 06/01/2009] [Indexed: 10/20/2022]
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19
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Matsuda S, Yamanoi T, Watanabe M. Syntheses of a partially benzylated derivative of the anhydro-d-altro-heptulose found in Coriaria japonica A and of its analogs. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.06.068] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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20
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Zhu X. MMTr as an efficient anomeric S-protecting group for the synthesis of glycosyl thiols. Tetrahedron Lett 2006. [DOI: 10.1016/j.tetlet.2006.09.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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21
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Adinolfi M, Galletti P, Giacomini D, Iadonisi A, Quintavalla A, Ravidà A. Toward Novel Glyconjugates: Efficient Synthesis of Glycosylated 4-Alkylidene--lactams. European J Org Chem 2006. [DOI: 10.1002/ejoc.200500665] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Jayaprakash KN, Fraser-Reid B. One-Pot Chemo-, Regio-, and Stereoselective Double-Differential Glycosidation Mediated by Lanthanide Triflates. Org Lett 2004; 6:4211-4. [PMID: 15524445 DOI: 10.1021/ol0483697] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Nuanced activation of n-pentenyl, thioglycoside, and trichloroacetimidate donors by lanthanide salts coupled with donor/acceptor matching can simplify oligosaccharide assembly. Thus, a one-pot, double-differential glycosidation process can be designed, in which an n-pentenyl acceptor-diol is chemo- and regioselectively glycosidated by using an n-pentenyl ortho ester under the agency of Yb(OTf)(3)/NIS followed by in situ addition of a 2-O-acylated trichloroacetimidate or ethyl thioglycoside to effect stereoselective glycosidation at the remaining OH.
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Affiliation(s)
- K N Jayaprakash
- Natural Products and Glycotechnology Research Institute, Inc., 4118 Swarthmore Road, Durham, North Carolina 27707, USA
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