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For: Philo JS. Sedimentation equilibrium analysis of mixed associations using numerical constraints to impose mass or signal conservation. Methods Enzymol 2001;321:100-20. [PMID: 10909053 DOI: 10.1016/s0076-6879(00)21189-0] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Number Cited by Other Article(s)
1
The Glucagon-Like Peptide 2 Analog Teduglutide Reversibly Associates to Form Pentamers. J Pharm Sci 2019;109:775-784. [PMID: 31306652 DOI: 10.1016/j.xphs.2019.06.028] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 06/12/2019] [Accepted: 06/25/2019] [Indexed: 11/23/2022]
2
Zhou XX, Fan LZ, Li P, Shen K, Lin MZ. Optical control of cell signaling by single-chain photoswitchable kinases. Science 2017;355:836-842. [PMID: 28232577 DOI: 10.1126/science.aah3605] [Citation(s) in RCA: 134] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2016] [Revised: 11/15/2016] [Accepted: 01/23/2017] [Indexed: 12/31/2022]
3
A composite polynomial approach for analyzing the indefinite self-association of macromolecules studied by sedimentation equilibrium. Biophys Chem 2017. [PMID: 28628895 DOI: 10.1016/j.bpc.2017.06.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
4
Ma J, Metrick M, Ghirlando R, Zhao H, Schuck P. Variable-Field Analytical Ultracentrifugation: I. Time-Optimized Sedimentation Equilibrium. Biophys J 2016;109:827-37. [PMID: 26287634 DOI: 10.1016/j.bpj.2015.07.015] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2015] [Revised: 06/26/2015] [Accepted: 07/07/2015] [Indexed: 10/23/2022]  Open
5
Sedimentation equilibrium studies. Methods Mol Biol 2015;1278:205-22. [PMID: 25859951 DOI: 10.1007/978-1-4939-2425-7_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
6
Brautigam CA, Padrick SB, Schuck P. Multi-signal sedimentation velocity analysis with mass conservation for determining the stoichiometry of protein complexes. PLoS One 2013;8:e62694. [PMID: 23696787 PMCID: PMC3656001 DOI: 10.1371/journal.pone.0062694] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2012] [Accepted: 03/25/2013] [Indexed: 01/12/2023]  Open
7
Schuck P. Analytical Ultracentrifugation as a Tool for Studying Protein Interactions. Biophys Rev 2013;5:159-171. [PMID: 23682298 DOI: 10.1007/s12551-013-0106-2] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
8
Zhao H, Brautigam CA, Ghirlando R, Schuck P. Overview of current methods in sedimentation velocity and sedimentation equilibrium analytical ultracentrifugation. CURRENT PROTOCOLS IN PROTEIN SCIENCE 2013;Chapter 20:Unit20.12. [PMID: 23377850 PMCID: PMC3652391 DOI: 10.1002/0471140864.ps2012s71] [Citation(s) in RCA: 139] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
9
Zhao H, Berger AJ, Brown PH, Kumar J, Balbo A, May CA, Casillas E, Laue TM, Patterson GH, Mayer ML, Schuck P. Analysis of high-affinity assembly for AMPA receptor amino-terminal domains. J Gen Physiol 2012;139:371-88. [PMID: 22508847 PMCID: PMC3343374 DOI: 10.1085/jgp.201210770] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2012] [Accepted: 03/27/2012] [Indexed: 01/06/2023]  Open
10
Protein-Protein Interactions as Drug Targets. TOPICS IN MEDICINAL CHEMISTRY 2012. [DOI: 10.1007/978-3-642-28965-1_1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
11
Ghirlando R. The analysis of macromolecular interactions by sedimentation equilibrium. Methods 2010;54:145-56. [PMID: 21167941 DOI: 10.1016/j.ymeth.2010.12.005] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2010] [Revised: 11/27/2010] [Accepted: 12/03/2010] [Indexed: 11/29/2022]  Open
12
Cole JL. Analysis of PKR activation using analytical ultracentrifugation. Macromol Biosci 2010;10:703-13. [PMID: 20533534 PMCID: PMC2926283 DOI: 10.1002/mabi.201000069] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
13
Ogawa H, Qiu Y, Philo JS, Arakawa T, Ogata CM, Misono KS. Reversibly bound chloride in the atrial natriuretic peptide receptor hormone-binding domain: possible allosteric regulation and a conserved structural motif for the chloride-binding site. Protein Sci 2010;19:544-57. [PMID: 20066666 DOI: 10.1002/pro.332] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
14
Cole JL, Lary JW, P Moody T, Laue TM. Analytical ultracentrifugation: sedimentation velocity and sedimentation equilibrium. Methods Cell Biol 2007;84:143-79. [PMID: 17964931 DOI: 10.1016/s0091-679x(07)84006-4] [Citation(s) in RCA: 292] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
15
Balbo A, Brown PH, Braswell EH, Schuck P. Measuring protein-protein interactions by equilibrium sedimentation. CURRENT PROTOCOLS IN IMMUNOLOGY 2007;Chapter 18:18.8.1-18.8.28. [PMID: 18432990 DOI: 10.1002/0471142735.im1808s79] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
16
Dey S, Hu Z, Xu XL, Sacchettini JC, Grant GA. The Effect of Hinge Mutations on Effector Binding and Domain Rotation in Escherichia coli D-3-Phosphoglycerate Dehydrogenase. J Biol Chem 2007;282:18418-18426. [PMID: 17459882 DOI: 10.1074/jbc.m701174200] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
17
Behlke J, Ristau O, Müller EC, Hannemann F, Bernhardt R. Self-association of adrenodoxin studied by using analytical ultracentrifugation. Biophys Chem 2007;125:159-65. [PMID: 16916573 DOI: 10.1016/j.bpc.2006.07.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2006] [Revised: 07/19/2006] [Accepted: 07/19/2006] [Indexed: 11/28/2022]
18
Gao X, Harris TK. Role of the PH domain in regulating in vitro autophosphorylation events required for reconstitution of PDK1 catalytic activity. Bioorg Chem 2006;34:200-23. [PMID: 16780920 DOI: 10.1016/j.bioorg.2006.05.002] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2006] [Accepted: 05/09/2006] [Indexed: 01/17/2023]
19
Vistica J, Dam J, Balbo A, Yikilmaz E, Mariuzza RA, Rouault TA, Schuck P. Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition. Anal Biochem 2004;326:234-56. [PMID: 15003564 DOI: 10.1016/j.ab.2003.12.014] [Citation(s) in RCA: 303] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2003] [Indexed: 11/23/2022]
20
Philo JS, Yang TH, LaBarre M. Re-examining the oligomerization state of macrophage migration inhibitory factor (MIF) in solution. Biophys Chem 2004;108:77-87. [PMID: 15043922 DOI: 10.1016/j.bpc.2003.10.010] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
21
Ucci JW, Cole JL. Global analysis of non-specific protein-nucleic interactions by sedimentation equilibrium. Biophys Chem 2004;108:127-40. [PMID: 15043926 PMCID: PMC2924682 DOI: 10.1016/j.bpc.2003.10.033] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
22
Arkin MR, Wells JA. Small-molecule inhibitors of protein-protein interactions: progressing towards the dream. Nat Rev Drug Discov 2004;3:301-17. [PMID: 15060526 DOI: 10.1038/nrd1343] [Citation(s) in RCA: 1246] [Impact Index Per Article: 59.3] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
23
Correia JJ, Johnson ML, Laue T, Stafford WF, Williams RC. Spinning with Dave: David Yphantis's contributions to ultracentrifugation. Biophys Chem 2004;108:23-42. [PMID: 15043919 DOI: 10.1016/j.bpc.2003.10.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
24
Cole JL. Analysis of heterogeneous interactions. Methods Enzymol 2004;384:212-32. [PMID: 15081689 PMCID: PMC2924680 DOI: 10.1016/s0076-6879(04)84013-8] [Citation(s) in RCA: 115] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
25
Schuck P. On the analysis of protein self-association by sedimentation velocity analytical ultracentrifugation. Anal Biochem 2003;320:104-24. [PMID: 12895474 DOI: 10.1016/s0003-2697(03)00289-6] [Citation(s) in RCA: 518] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
26
Lebowitz J, Lewis MS, Schuck P. Modern analytical ultracentrifugation in protein science: a tutorial review. Protein Sci 2002;11:2067-79. [PMID: 12192063 PMCID: PMC2373601 DOI: 10.1110/ps.0207702] [Citation(s) in RCA: 546] [Impact Index Per Article: 23.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
27
Carulla N, Woodward C, Barany G. BetaCore, a designed water soluble four-stranded antiparallel beta-sheet protein. Protein Sci 2002;11:1539-51. [PMID: 12021452 PMCID: PMC2373618 DOI: 10.1110/ps.4440102] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
28
Zweifel ME, Barrick D. Studies of the ankyrin repeats of the Drosophila melanogaster Notch receptor. 1. Solution conformational and hydrodynamic properties. Biochemistry 2001;40:14344-56. [PMID: 11724546 DOI: 10.1021/bi011435h] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
29
Correia JJ, Chacko BM, Lam SS, Lin K. Sedimentation studies reveal a direct role of phosphorylation in Smad3:Smad4 homo- and hetero-trimerization. Biochemistry 2001;40:1473-82. [PMID: 11170475 DOI: 10.1021/bi0019343] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
30
Lobert S, Fahy J, Hill BT, Duflos A, Etievant C, Correia JJ. Vinca alkaloid-induced tubulin spiral formation correlates with cytotoxicity in the leukemic L1210 cell line. Biochemistry 2000;39:12053-62. [PMID: 11009620 DOI: 10.1021/bi001038r] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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