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Kulikov V, Johnson NAB, Surman A, Hutin M, Kelly SM, Hezwani M, Long DL, Meyer G, Cronin L. Spontaner Aufbau einer organisch-anorganischen Nukleinsäure-Z-DNA-Doppelhelix-Struktur. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201606658] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Vladislav Kulikov
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Naomi A. B. Johnson
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Andrew Surman
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Marie Hutin
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Sharon M. Kelly
- The University of Glasgow; Institute of Molecular Cell and Systems Biology; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Mohammed Hezwani
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - De-Liang Long
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
| | - Gerd Meyer
- Universität zu Köln; Institut für Anorganische Chemie; Greinstraße 6 50939 Köln Deutschland
- Iowa State University; Department of Chemistry; Ames Iowa 50011 USA
| | - Leroy Cronin
- The University of Glasgow; WestChem; School of Chemistry; Joseph Black Building Glasgow G12 8QQ Großbritannien
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2
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Kulikov V, Johnson NAB, Surman AJ, Hutin M, Kelly SM, Hezwani M, Long DL, Meyer G, Cronin L. Spontaneous Assembly of an Organic-Inorganic Nucleic Acid Z-DNA Double-Helix Structure. Angew Chem Int Ed Engl 2016; 56:1141-1145. [PMID: 27900812 PMCID: PMC6057607 DOI: 10.1002/anie.201606658] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2016] [Indexed: 11/06/2022]
Abstract
Herein, we report a hybrid polyoxometalate organic-inorganic compound, Na2 [(HGMP)2 Mo5 O15 ]⋅7 H2 O (1; where GMP=guanosine monophosphate), which spontaneously assembles into a structure with dimensions that are strikingly similar to those of the naturally occurring left-handed Z-form of DNA. The helical parameters in the crystal structure of the new compound, such as rise per turn and helical twist per dimer, are nearly identical to this DNA conformation, allowing a close comparison of the two structures. Solution circular dichroism studies show that compound 1 also forms extended secondary structures in solution. Gel electrophoresis studies demonstrate the formation of non-covalent adducts with natural plasmids. Thus we show a route by which simple hybrid inorganic-organic monomers, such as compound 1, can spontaneously assemble into a double helix without the need for a covalently connected linear sequence of nucleic acid base pairs.
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Affiliation(s)
- Vladislav Kulikov
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Naomi A B Johnson
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Andrew J Surman
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Marie Hutin
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Sharon M Kelly
- The University of Glasgow, Institute of Molecular Cell and Systems Biology, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Mohammed Hezwani
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - De-Liang Long
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
| | - Gerd Meyer
- Universität zu Köln, Institut für Anorganische Chemie, Greinstrasse 6, 50939, Köln, Germany.,Iowa State University, Department of Chemistry, Ames, Iowa, 50011, USA
| | - Leroy Cronin
- The University of Glasgow, WestChem, School of Chemistry, Joseph Black Building, Glasgow, G12 8QQ, UK
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Absillis G, Van Deun R, Parac-Vogt TN. Polyoxomolybdate Promoted Hydrolysis of a DNA-Model Phosphoester Studied by NMR and EXAFS Spectroscopy. Inorg Chem 2011; 50:11552-60. [DOI: 10.1021/ic201498u] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Gregory Absillis
- Department of Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Rik Van Deun
- Inorganic and Physical Chemistry Department, Universiteit Gent, Krijgslaan 281, Building S3, B-9000 Gent, Belgium
| | - Tatjana N. Parac-Vogt
- Department of Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
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5
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Cartuyvels E, Van Hecke K, Van Meervelt L, Görller-Walrand C, Parac-Vogt TN. Structural characterization and reactivity of gamma-octamolybdate functionalized by proline. J Inorg Biochem 2008; 102:1589-98. [PMID: 18374986 DOI: 10.1016/j.jinorgbio.2008.02.005] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2007] [Revised: 02/12/2008] [Accepted: 02/13/2008] [Indexed: 10/22/2022]
Abstract
The reaction of molybdate and dl-proline at pH 3.4 results in the formation of a Na(4)[Mo(8)O(26)(proO)(2)] x 22H(2)O complex (pro=proline) in which two proline ligands are attached to molybdenum(VI) ions via monodentate coordination of the carboxylate groups. The structure of the complex was determined by single crystal X-ray diffraction and by combination of (1)H, (13)C and (95)Mo NMR spectroscopy techniques in solution. The structure of the complex is strongly dependent on the pH. At native pH 3.4 the octamolybdate-type structure seems to be present in solution, but the increase of pH to 5.8 resulted in a rearrangement of the structure to a heptamolybdate-type structure. At physiological pH, the polyoxometalate framework was completely dissociated into the monomeric MoO(4)(2-) unit. The reactivity of the Na(4)[Mo(8)O(26)(proO)(2)] x 22H(2)O towards the hydrolysis of ATP was tested at different pH values. While in solution at pH 3.4 the hydrolysis proceeded to yield AMP (adenosine monophosphate) and ADP (adenosine diphosphate) in nearly equal amounts, reaction mixture at pH 5.8 gave ADP as the only product of hydrolysis after 24h of reaction. At neutral pH, the hydrolysis of ATP was slower, but it proceeded to yield 75% of ADP after 48 h of reaction.
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Affiliation(s)
- Els Cartuyvels
- Department of Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
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Cartuyvels E, Absillis G, Parac-Vogt TN. Questioning the paradigm of metal complex promoted phosphodiester hydrolysis: [Mo7O24]6−polyoxometalate cluster as an unlikely catalyst for the hydrolysis of a DNA model substrate. Chem Commun (Camb) 2008:85-7. [DOI: 10.1039/b714860g] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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7
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Lokeren LV, Cartuyvels E, Absillis G, Willem R, Parac-Vogt TN. Phosphoesterase activity of polyoxomolybdates: diffusion ordered NMR spectroscopy as a tool for obtaining insights into the reactivity of polyoxometalate clusters. Chem Commun (Camb) 2008:2774-6. [DOI: 10.1039/b802671h] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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8
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Levina A, McLeod AI, Seuring J, Lay PA. Reactivity of potential anti-diabetic molybdenum(VI) complexes in biological media: A XANES spectroscopic study. J Inorg Biochem 2007; 101:1586-93. [PMID: 17764745 DOI: 10.1016/j.jinorgbio.2007.07.016] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2007] [Revised: 06/29/2007] [Accepted: 07/10/2007] [Indexed: 11/18/2022]
Abstract
The application of Mo(VI) complexes as anti-diabetic agents is a subject of considerable recent interest. The stability and speciation of [Mo(VI)O(4)](2-) and three analogs of known anti-diabetic V(IV) complexes ([Mo(VI)O(2)L(2)]; where LH=2,4-pentanedione, l-cysteine ethyl ester or N,N-diethyldithiocarbamic acid) in natural and simulated biological fluids (including blood and its components, cell culture media, and artificial digestion systems) were studied using MoK-edge XANES (X-ray absorption near-edge structure) spectroscopy of freeze-dried samples at 20K. All of the studied [MoO(2)L(2)] complexes decomposed extensively under simulated gastric and intestinal digestion conditions (3 h at 310 K), as well as in blood plasma or in cell culture medium (24 h at 310 K). The reaction products of [MoO(4)](2-) and [MoO(2)L(2)] with biological fluids could be satisfactorily modelled (using multiple linear regression analyses) as mixtures of tetrahedral and octahedral Mo(VI) species (with O-donor ligands) in various ratios, which were dependent on the nature of the medium rather than that of the initial Mo(VI) compounds. Red blood cells take up Mo(VI) predominantly in the form of [MoO(4)](2-). Implications of these results to the development of Mo(VI)-based anti-diabetics and to the mechanisms of natural uptake and metabolism of Mo(VI) are discussed.
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Affiliation(s)
- Aviva Levina
- Centre for Heavy Metals Research and Centre for Structural Biology and Structural Chemistry, School of Chemistry, The University of Sydney, NSW 2006, Australia
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