A semi-automated in vitro gas production technique for ruminant feedstuff evaluation

Comparative Digestibility and Gas Production Kinetics of Tifton 85 Hay in Donkeys and Horses

This study aimed to verify whether donkeys of the Nordestino ecotype are more efficient than horses concerning apparent digestibility and gas production of Tifton 85 hay at different maturity stages, using the total feces collection method and the in vitro gas production technique. Four donkeys and four horses were used in a 2 × 2 factorial completely randomized design with two Equidae species and hay at two maturity stages (higher quality "Hay 1" and lower quality "Hay 2"). No difference (P<0,05) was found between the Equidae species for apparent nutrient digestibility of the Hay 1. For the Hay 2, there was a difference only in crude protein (horses 93.15% and donkeys 90.84%) and neutral detergent insoluble protein (horses 48.09% and donkeys 25.36%). Both species exhibited higher productions of total gas volume when fed the higher quality hay (horses 69,02 for Hay 1 and 45,67 for Hay 2, donkeys 58,37 for Hay 1 and 55,27 for Hay 2, unit: mL g-1 MS). A higher gas volume production related to the digestible fiber fraction was found for the lower quality hay. Moreover, the horses exhibited higher gas volume of the non-fiber carbohydrate fraction value and greater total gas production with the higher quality hay. It is concluded that donkeys of the Nordestino ecotype fed as horses, i.e., consuming 2% live weight/day of the higher quality hay, demonstrated comparable digestibility profiles as horses. On the other hand, when fed the lower quality hay, the donkeys demonstrated greater digestive efficiency of the fiber fraction.

Dose-response effects of dietary inclusion of agro-industrial by-products on in vitro ruminal fermentation and methane production

BACKGROUND

As the agro-industry produces considerable amounts of by-products globally, it is acknowledged that there is a need to address the environmental issues related to their disposal and the resource competition between food for humans and feed for animals. The aim of this study was to explore, in vitro, the effects of various by-products from the agro-industry on rumen fermentation and methane emission. Samples were collected from various food processing industries, including red and green apple pomace (RAP, GAP), hempseed cake (HC), coffee hulls (CH), coffee grounds (CG), spent mushroom compost (SMC) and distiller's dried grains with solubles (DDGS). In doses of 100, 200 and 300 g kg-1, the tested by-products were incubated in rumen fluid, where the by-products replaced equal amounts of substrates.

RESULTS

Gas production (GP) and dry matter digestibility (DMD) decreased linearly for most of the tested by-products with the growth of doses (P < 0.001), while NH3-N concentration increased linearly. Linear decreases were observed in CH4 production with increasing doses of all by-products (P < 0.05). The reduction of CH4 production ranged from 21.4% to 33.6% at doses of 100-300 g kg-1, but reductions were only observed at a dose of 100 g kg-1 when CH4 productions were corrected by digested dry matter (P < 0.05). RAP, GAP and HC were higher than CH, CG and SMC for the comparison of key parameters including DMD, GP and volatile fatty acids. Better methane-mitigating effects were observed for RAP, GAP and HC than for the control group and CH, CG and SMC.

CONCLUSION

Most of the by-products tested were found to be a potential option for replacing conventional feed ingredients but should not exceed a dose at 200 g kg-1. © 2025 The Author(s). Journal of the Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

Effects of Onion Peel Inclusion on In Vitro Fermentation, Methane and Carbon Dioxide Emissions, and Nutrient Degradability in Dairy Cow Diets

Enteric greenhouse gas (GHG) emissions represent a major challenge in livestock production, contributing significantly to global methane output. Various strategies have been explored to mitigate these emissions, including dietary modifications, feed additives, and genetic improvements. In the present study, the focus was on onion peel (OP), a byproduct of the onion processing industry that has shown promise as a natural feed supplement with potential methane-reducing properties. We evaluated the effect of different inclusion levels of OP at 2.5% (OP2.5), 5% (OP5), 7.5% (OP7.5), and 10% (OP10) on the in vitro fermentation of two diets: a total mixed ration referred to as high concentrate (HC), and corn silage referred to as high forage (HF). A 48 h batch culture experiment using a 2 × 3 × 5 factorial arrangement was conducted to assess total gas production (GP), methane (CH4), carbon dioxide (CO2), ammonia (NH3), and hydrogen sulfide (H2S) concentrations, and nutrient degradability. Measurements were taken at 6 h, 24 h, and 48 h of incubation. Significant additive × diet interactions were observed for most of the parameters. The HC diet produced more gas but less CH4, CO2, NH3, and H2S compared to the HF diet (p < 0.05). At 24 h of incubation, the OP at all levels increased CH4, CO2, NH3, and H2S concentrations in the HF diet (p < 0.05). The OP2.5 treatment had the lowest (quadratic effect, p < 0.05) degradable dry matter (dDM) in the HC diet, while the OP linearly (p < 0.001) increased degradable acid detergent fiber (dADF) in both diets. The lowest total volatile fatty acids (VFA) and acetate (quadratic effect, p = 0.027) were observed with the OP5 treatment in the HC diet, while OP5, OP7.5, and OP10 had lower total VFA concentration in the HC diet. At 48 h of incubation, the OP7.5 treatment increased (p < 0.05) GP and CH4 and CO2 production in the HC diet. However, the OP5 treatment had the lowest CH4 production (quadratic effect, p = 0.027) in the HF diet. The highest dDM was observed with OP7.5 treatment (quadratic effect, p = 0.038) in the HC diet with lower values noted at different inclusion levels in the HF diet. Inclusion of OP had no effect on total VFA, and individual VFA in both diets. In conclusion, OP supplementation is more suitable for HF diets than HC diets. A 5% inclusion level is recommended to decrease ruminal CH4production and improve nutrient degradability.

Release of Hypoglycin A from Hypoglycin B and Decrease of Hypoglycin A and Methylene Cyclopropyl Glycine Concentrations in Ruminal Fluid Batch Cultures

The transformation of hypoglycin A (HGA), hypoglycin B (HGB), and methylene cyclopropyl glycine (MCPrG) in ruminal fluid batch cultures was investigated, and the effect of these toxins on the batch culture microorganisms using microbial metabolites was measured. An experiment was conducted using ovine ruminal fluid batch cultures and the ANKOM RF Gas Production System over four runs, each with an incubation period of 48 h. The fermenters contained 200 mg of (i) a substrate mixture (80% cellulose, 20% starch; CSM), (ii) CSM and 1.5 mL of a solution of pure toxins (a mixture of 500 ng/mL HGA and MCPrG each; PCM), or (iii) CSM and 100 mg sycamore maple seeds (SMS). Each fermenter contained 30 mL of inoculum (ruminal fluid and buffer, 1:2 v/v). For control, autoclaved ruminal fluid was incubated with CSM, PCM, and SMS, respectively. Samples were taken from the liquid phase of the fermenters and analyzed using liquid chromatography-tandem mass spectrometry (LC/MS-MS) for sycamore maple toxins and metabolites. Microbial activity was assessed using gas production, short chain fatty acids, and NH3 concentration. Additionally, pH and redox potentials were measured. In PCM, HGA and MCPrG concentrations rapidly decreased (p < 0.05), and were not measurable anymore after a 24 h incubation period. In SMS, the initial concentrations were 4.7 ± 1.4 µg/mL HGA, 19.9 ± 5.41 µg/mL HGB, and 1.2 ± 0.33 µg/mL MCPrG. In SMS, HGA increased in 24 h, coincidently to a decrease in HGB concentration (p < 0.05). We modeled a rapid conversion of HGB to HGA, accompanied by progressive HGA transformation. The concentration of MCPrG was constant until 4 h and decreased afterwards (p < 0.05). In SMS incubations, HGA and MCPrG concentrations of 5.6 ± 1.5 and 0.32 ± 0.090 µg/mL remained after 48 h, respectively. The HGB to HGA conversion and transformation of HGA and MCPrG also occurred in autoclaved ruminal fluid. Gas production and microbial metabolite concentrations were higher in SMS compared to CSM and PCM (p < 0.05), as the seeds were used as an additional substrate by the batch culture microorganisms.

Effects of direct-fed microbials supplementation on in vitro and ex vivo ruminal fermentation and nutrient degradability in lactating Holstein dairy cows

We conducted two experiments to evaluate the effect of direct-fed microbials (DFM) on fermentation parameters and nutrient degradability with two different approaches using rumen fluid from lactating Holstein dairy cows. In Exp. 1, three doses of a DFM containing Lactobacillus animalis and Propionibacterium freudenreichii (PRO-A) at doses of 3.9 × 106, 7.8 × 106, and 11.7 × 106 CFU or a DFM containing PRO-A, Bacillus subtilis, and B. licheniformis (PRO-B) at doses of 15.2 × 106, 30.4 × 106, and 45.6 × 106 CFU were incubated using corn silage as substrate and pooled rumen fluid from three-rumen fistulated lactating Holstein cows. Dry matter and NDF degradability, gas production, and rumen pH were measured over a 24-h period. In Exp. 2, three ruminally cannulated multiparous cows (165 ± 63 DIM) were used in a 3 × 3 Latin square design. Each experimental period was of 28 d. All cows received a corn silage-based TMR (basal diet), and were assigned to: 1) Control (CON), 2) PRO-A: Basal diet top-dressed with PRO-A at 3 × 109 CFU/day, and 3) PRO-B: Basal diet top-dressed with PRO-B at 11.8 × 109 CFU/day. An ex vivo study (Exp. 2) was conducted using rumen fluid collected during wk 4 of each experimental period from experimental animals. Treatments included: CON, PRO-A, PRO-B, each of which utilized rumen fluid from donor cows given respective treatments. Another set of rumen fluid from PRO-A and PRO-B cows were dosed with additional dose of respective DFM, resulting in two more treatments (PRO-A+ and PRO-B+). In Exp. 1, linear effects (P = 0.03) were observed on in vitro NDF degradability following DFM incubation. In Exp. 2, no treatment effects were observed on DM and NDF digestibility. In summary, DFM increased DM and NDF degradability in vitro using rumen fluid from cows not exposed to DFM; however, no effects were observed under ex vivo experimental conditions when rumen fluid was collected from cows consuming DFM.

Synergistic Effects of Mannan Oligosaccharides and Onion Peels on In Vitro Batch Culture Fermentation of High Concentrate and Forage Diets

The current study evaluated the effect of combining mannan oligosaccharide (MOS) and onion peel (OP) on ruminal in vitro total gas (GP), greenhouse gas emissions, dry matter and fiber fraction digestibility, partitioning factor (PF24; mg degradable DM per mL gas), microbial mass, and volatile fatty acids using two dietary substrates: high forage (HF) and high concentrate (HC) diets. The study was arranged as a 2 × 2 × 6 factorial design with two dietary substrates, two time points (6 and 24 h), and six treatments. The treatments included a control group with no MOS or OP administration and groups administered with 2% of a mixture containing MOS and OP in the following ratios: 1:0 (MOS), 0:1 (OP), 1:1 (MOS:OP), 1:2 (MOS:2OP), and 1:3 (MOS:3OP). No significant diet × treatment interactions were observed for any of the measured parameters. However, treatments decreased (p < 0.05) the undegraded portion of HC, and treatment × substrate interactions were significant (p < 0.05) for PF24 and microbial mass. The treatments in the HC diet produced higher GP (p < 0.001) at 6 h compared to the treatments in the HF diet. Administration of MOS:2OP to the HC diet increased GP at 24 h of incubation, while the lowest GP was observed with the OP in the HF diet. The administration of MOS, OP, and MOS:2OP to the HC diet decreased methane production at 24 h of incubation. Additionally, MOS:2OP and MOS:3OP increased (p < 0.001) degradable acid detergent fiber (dADF) in the HC diet at 6 h of incubation. Both OP and MOS:3OP decreased the degradability of acid detergent lignin in the HC diet (p < 0.001). The OP also resulted in the lowest DM disappearance (p < 0.001) at 24 h of incubation in the HF diet, while the MOS:3OP had the highest dADF. At the end of incubation, the highest productions of total volatile fatty acids and acetate were observed (p = 0.002) with the MOS:OP administration in the HC diet, whereas the lowest values were observed with MOS and OP administration to the HF diet. The inclusion of mannan oligosaccharide and onion peel combinations as additives improved substrate (HC and HF) fermentation, leading to higher GP and volatile fatty production, and modulated fiber degradability by improving the breakdown of acid detergent fiber and acid detergent lignin.

Interactions between soluble dietary fibers from three edible fungi and gut microbiota

Edible fungi are emerging as a valuable dietary fiber source with health benefits, where their bioactivity hinges on their structure. This study targets the structure-activity relationship of soluble dietary fibers from Lentinus edodes (LESDF), Agaricus bisporus (ABSDF), and Hericium erinaceus (HESDF), focusing on their impact on gut microbiota and health. We explored the properties and structures of edible fungi, finding their soluble fibers affect metabolites and gut microbiota by increasing gas and lowering pH. Among these, HESDF demonstrated superior effects (pH: △1.4 ± 0.07; Gas production: △24.5 ± 0.4 mL). Furthermore, different types of edible fungi dietary fiber exhibited distinct capabilities in promoting the production of short-chain fatty acids by gut microorganisms. For instance, ABSDF exceled in acetic acid production (26.12 ± 0.35 mM) and propionic acid production (9.50 ± 0.13 mM), while HESDF stood out in butyric acid production (17.86 ± 0.09 mM). LESDF showed higher levels of Phascolarctobacterium, ABSDF had elevated levels of Ruminococcus, and HESDF displayed increased levels of Faecalibacterium. These results contribute to our understanding of how soluble dietary fiber from different edible fungi impacts gut microbiota and offers insights for the development and utilization of these fibers as functional food.

Nutritive Value and Degradation Kinetic Parameters of Three Plants for Feeding Bradypus variegatus Schinz, In Vitro Evaluation

This study aimed to evaluate the nutritive value of three feeds (Cecropia sp., Pterodon sp., and Inga sp.) for sloths (Bradypus variegatus), based on nutritional composition and in vitro gas production. After a 14-day adaptation period to these feeds, approximately 500 g of gastric contents were collected from three female sloths, processed, and incubated with the food samples to evaluate digestibility and in vitro degradation kinetics. Regarding the nutritional composition, the neutral detergent fiber (NDFcp) content was higher with 404 g kg-1 DM (p = 0.001) in the leaves of Cecropia sp. The non-fibrous carbohydrate contents were greater with 499 g kg-1 DM in Pterodon sp. (p = 0.002). The greatest cellulose content (211 g kg-1 DM) was found in the leaves of C. pachystachya, as well as the lowest value of 143 g kg-1 DM for hemicellulose. Significant differences in the in vitro digestibility of crude protein (p = 0.041) were observed, with Inga sp. showing the highest value at 547 g kg-1 DM. In terms of kinetic parameters, Pterodon sp. exhibited higher total gas production (Vt) at 99 mL (p = 0.023) and digestion rates of fibrous carbohydrates (kdFC) at 0.0223%/h (p = 0.020) (p < 0.05). The leaves of Pterodon sp. and Inga sp. showed potential as suitable feeds for B. variegatus, while Cecropia sp. may have negative effects on dry matter intake due to its high NDF content, because of possible repletion effects on the stomach.

The Impact of Three White-Rot Fungi on Nutrient Availability, Greenhouse Gas Emissions, and Volatile Fatty Acid Production in Myceliated Sorghum

Our study employed Pleurotus ostreatus, P. djamor, and Trametes versicolor (white rot fungi = WRF) in the process of solid-state fermentation (SSF) to convert sorghum grains into myceliated sorghum (MS). The MS was then used for in vitro studies to assess changes in nutrient content compared to untreated sorghum (control). The results demonstrated a significant (p < 0.001) increase in dry matter (DM), crude protein (CP), ash, neutral detergent fiber (NDF), and acid detergent fiber (ADF) contents of MS. Specifically, CP and ash values saw a remarkable increase from 68 to 330% and 40 to 190% in MS, respectively. Additionally, NDF and ADF degradability values increased significantly (p < 0.001) by 81.5% and 56.2% in P. djamor-treated MS at 24 h post-incubation. The treatment × time interaction was also significant (p < 0.001) for greenhouse gas (GHG) emissions. T. versicolor MS exhibited the highest total volatile fatty acid (TVFA) and propionate production. The use of WRF in the SSF process led to a significant improvement in the nutritional value of sorghum. Despite the varying effects of different WRF on the nutritional parameters in MS, they show potential for enhancing the feed value of sorghum in animal feed.

Isobutyramide and Slow-Release Urea as Substitutes for Soybean Meal in the Finishing Diet of Beef Cattle

Two experiments were conducted to investigate the effects of isobutyramide (IBA) and slow-release urea (SRU) as substitutes for soybean meal (SBM) in the finishing diet of beef cattle. The completely randomized design in vitro experiment with five treatments, i.e., control, 0.9% SRU group, 0.6% SRU + 0.3% IBA group (SRU-I), 0.3% SRU + 0.6% IBA group (IBA-S), 0.9% IBA group was conducted. The results showed that the IBA-S and IBA increased (p ≤ 0.05) substrate disappearance of dry matter (DM), neutral detergent fiber (NDF), acid detergent fiber (ADF), total gas, and total volatile fatty acids (TVFA). The SRU group had the highest (p < 0.01) crude protein disappearance and ammonia nitrogen concentration, but the IBA contrarily decreased (p < 0.01) them compared with the control. Inclusion of IBA increased isobutyrate concentrations (p = 0.01) with the highest value for the IBA group. Then, an 84-day replicate 4 × 4 Latin square design with 8 Angus steers and four treatments, i.e., control, SRU, SRU-I, IBA-S was performed. The results showed that the treatments did not affect DM intake (p > 0.05) but tended (p = 0.09) to increase average daily gain. The inclusion of IBA increased (p < 0.05) the apparent digestibility of DM, organic matter, NDF, ADF, TVFA, and microbial crude protein with the highest values for the IBA-S group. The IBA-contained groups also increased (p ≤ 0.01) isobutyrate concentration, activities of carboxymethyl cellulase and xylanase, and the relative abundance of Butyrivibrio fibrisolvens with the highest values for the IBA-S group. The SRU had no effect on animal growth and nutrient apparent digestibility. In conclusion, IBA was developed as a new substitute for SBM in the finishing diet of beef cattle, and the optimal strategy was the isonitrogenous substitution of SBM with 0.3% SRU and 0.6% IBA of the diet.

Antioxidant Activities and Prebiotic Activities of Water-Soluble, Alkali-Soluble Polysaccharides Extracted from the Fruiting Bodies of the Fungus Hericium erinaceus

In this study, the digestion and fermentation properties of the bioactive water-soluble polysaccharide (HEP-W), and alkali-soluble polysaccharide (HEP-A) from Hericium erinaceus and the impact on the human colonic microbiota were determined using simulated saliva-gastrointestinal digestion and human fecal fermentation models in vitro. The basic physicochemical properties of HEP-W and HEP-A were determined at the same time. The results showed that the in vitro simulated digestion had almost no effect on the physicochemical properties of HEP-W and HEP-A, indicating that HEP-W and HEP-A were partially degraded. During fermentation, HEP-W and HEP-A increased the relative abundance of the dominant butyric acid-producing genera, the microbial community structure was significantly regulated, the gas production and short-chain fatty acid production in the fermentation broth were significantly increased, and the pH of the fermentation broth was reduced. There were structural and other differences in HEP-W and HEP-A due to different extraction methods, which resulted in different results. These results suggest that HEP-W and HEP-A may be potential gut microbial manipulators to promote gut health by promoting the production of beneficial metabolites by intestinal microorganisms using different butyric acid production pathways.

Multi-omics revealed the long-term effect of ruminal keystone bacteria and the microbial metabolome on lactation performance in adult dairy goats

BACKGROUND

The increased growth rate of young animals can lead to higher lactation performance in adult goats; however, the effects of the ruminal microbiome on the growth of young goats, and the contribution of the early-life rumen microbiome to lifelong growth and lactation performance in goats has not yet been well defined. Hence, this study assessed the rumen microbiome in young goats with different average daily gains (ADG) and evaluated its contribution to growth and lactation performance during the first lactation period.

RESULTS

Based on monitoring of a cohort of 99 goats from youth to first lactation, the 15 highest ADG (HADG) goats and 15 lowest ADG (LADG) goats were subjected to rumen fluid microbiome and metabolome profiling. The comparison of the rumen metagenome of HADG and LADG goats revealed that ruminal carbohydrate metabolism and amino acid metabolism function were enhanced in HADG goats, suggesting that the rumen fluid microbiome of HADG goats has higher feed fermentation ability. Co-occurrence network and correlation analysis revealed that Streptococcus, Candidatus Saccharimonans, and Succinivibrionaceae UCG-001 were significantly positively correlated with young goats' growth rates and some HADG-enriched carbohydrate and protein metabolites, such as propionate, butyrate, maltoriose, and amino acids, while several genera and species of Prevotella and Methanogens exhibited a negative relationship with young goats' growth rates and correlated with LADG-enriched metabolites, such as rumen acetate as well as methane. Additionally, some functional keystone bacterial taxa, such as Prevotella, in the rumen of young goats were significantly correlated with the same taxa in the rumen of adult lactation goats. Prevotella also enriched the rumen of LADG lactating goats and had a negative effect on rumen fermentation efficiency in lactating goats. Additional analysis using random forest machine learning showed that rumen fluid microbiota and their metabolites of young goats, such as Prevotellaceae UCG-003, acetate to propionate ratio could be potential microbial markers that can potentially classify high or low ADG goats with an accuracy of prediction of > 81.3%. Similarly, the abundance of Streptococcus in the rumen of young goats could be predictive of milk yield in adult goats with high accuracy (area under the curve 91.7%).

CONCLUSIONS

This study identified the keystone bacterial taxa that influence carbohydrate and amino acid metabolic functions and shape the rumen fluid microbiota in the rumen of adult animals. Keystone bacteria and their effects on rumen fluid microbiota and metabolome composition during early life can lead to higher lactation performance in adult ruminants. These findings suggest that the rumen microbiome together with their metabolites in young ruminants have long-term effect on feed efficiency and animal performance. The fundamental knowledge may allow us to develop advanced methods to manipulate the rumen microbiome and improve production efficiency of ruminants. Video Abstract.

Effects of the Incubation Period of Pleurotus ostreatus on the Chemical Composition and Nutrient Availability of Solid-State-Fermented Corn Stover

The current study aimed to optimize and improve the feeding value of Pleurotus ostreatus-fermented corn stover by evaluating the effects of five solid-state fermentation times and three in vitro fermentation periods on the chemical composition, dry matter disappearance (DMD), microbial mass and volatile fatty acid (VFA) production of treated and untreated corn stover. The study utilized a 3 × 5 factorial design, with eight replicates per treatment. Dry matter, crude protein (CP), ash and non-fiber carbohydrate (NFC) contents increased quadratically (p < 0.05) with increases in the solid-state fermentation time. Increases of 44.4-59.1%, 20.6-78.6% and 40.5-121% were noted for the CP, ash and NFC contents, respectively. Organic matter, ether extract, neutral detergent fiber and hemicellulose contents decreased quadratically (p < 0.05) across the treatments. Similar trends were noted for DM and fiber disappearance in the treatments. The total gas production and in vitro true dry matter digestibility (IVTDMD) increased quadratically, while microbial mass and in vitro apparent DMD increased in a linear manner. The total VFA, propionate and butyrate contents increased linearly. Both the acetate content and the A:P ratio decreased in a linear manner. The results show that the rumen fermentation pathway favors the production of propionate, with increases in propionate production of 7.46 and 8.30% after 2 and 4 wk, respectively. The study showed that a 2 wk period of solid-state fermentation is sufficient to provide a bio-transformed cow-calf feed resource from P. ostreatus-treated corn stover.

An in vitro rumen incubation method to study exsheathment kinetics of Haemonchus contortus third-stage infective larvae

This study developed and evaluated an in vitro rumen incubation (IVRI) method to describe the exsheathment kinetics of Haemonchus contortus third-stage infective larvae (L₃) in ruminal liquor (RL). The specific objectives were (i) to standardize the IVRI method to facilitate the contact between L₃ and RL as well as the larval recovery, and (ii) to apply the IVRI method to describe the exsheathment kinetics of H. contortus and to select the best fitting nonlinear model. Incubation devices containing H. contortus larvae were incubated according to the IVRI technique in cattle RL or PBS. The incubation conditions included RL mixed with a nitrogen-rich media, maintained at 39 °C, with pH = 7.0, vented with CO₂ and manual agitation. The larvae were recovered after 0, 1, 3, 6, 9, 12, and 24 h. The exsheathed and ensheathed larvae were counted to estimate the exsheathment (%) in RL or PBS. Exsheathment in RL was analyzed with nonlinear regression models: Exponential, Gompertz, Logistic, Log-Logistic, and Weibull. The models' fit was compared to select the one that best described the exsheathment kinetics. The exsheathment in RL reached 6.52%, 20.65%, 58.22%, 69.24%, 73.08%, and 77.20% in 1, 3, 6, 9, 12, and 24 h, respectively. Although the Gompertz, Weibull, and Logistic models were adequate to describe the observed exsheathment, the Log-Logistic model had the best fit. The IVRI method using bovine RL represents a suitable tool for the study of the in vitro exsheathment kinetics of H. contortus L₃.

Evaluating the Effects of Some Selected Medicinal Plant Extracts on Feed Degradability, Microbial Protein Yield, and Total Gas Production In Vitro

This study evaluates the effect of 22 crude ethanolic plant extracts on in vitro rumen fermentation of Themeda triandra hay using monensin sodium as a positive control. The experiment was run independently three times at 16 and 48 h of incubation periods using the in vitro gas production techniques. Fermentation parameters were determined at both hours of incubation. Plant extracts influenced gas production (GP) in a varied way relative to control at both hours of incubation, and GP is consistently highly significant (p < 0.0001) at 16 and 48 h. Microbial protein yield (MY) was not significantly affected at 16 h (p > 0.05), but it was at 48 h (p < 0.01). Higher MY was recorded for all treatments except for A. sativum and C. intybus at the early incubation stage (16 h) relative to 48 h of incubation. Compared to the control group at 48 h, all plant extracts have higher MY. After 48 h of incubation, the result shows that plant extracts have an effect on fermentation parameters determined; ruminal feed degradation, gas production, microbial protein yield, and partitioning factor in varied manners. All the plant extracts improve the MY which is the major source of amino acids to ruminants and has significant importance to animal performance. C. illinoinensis, C. japonica, M. nigra, P. americana, C. papaya, and A. nilotica (pods) were the most promising plant extracts, but further study is recommended to validate the in vitro observation in vivo.

Rumen Fermentation Parameters Prediction Model for Dairy Cows Using a Stacking Ensemble Learning Method

Volatile fatty acids (VFAs) and methane are the main products of rumen fermentation. Quantitative studies of rumen fermentation parameters can be performed using in vitro techniques and machine learning methods. The currently proposed models suffer from poor generalization ability due to the small number of samples. In this study, a prediction model for rumen fermentation parameters (methane, acetic acid (AA), and propionic acid (PA)) of dairy cows is established using the stacking ensemble learning method and in vitro techniques. Four factors related to the nutrient level of total mixed rations (TMRs) are selected as inputs to the model: neutral detergent fiber (NDF), acid detergent fiber (ADF), crude protein (CP), and dry matter (DM). The comparison of the prediction results of the stacking model and base learners shows that the stacking ensemble learning method has better prediction results for rumen methane (coefficient of determination (R2) = 0.928, root mean square error (RMSE) = 0.968 mL/g), AA (R2 = 0.888, RMSE = 1.975 mmol/L) and PA (R2 = 0.924, RMSE = 0.74 mmol/L). And the stacking model simulates the variation of methane and VFAs in relation to the dietary fiber content. To demonstrate the robustness of the model in the case of small samples, an independent validation experiment was conducted. The stacking model successfully simulated the transition of rumen fermentation type and the change of methane content under different concentrate-to-forage (C:F) ratios of TMR. These results suggest that the rumen fermentation parameter prediction model can be used as a decision-making basis for the optimization of dairy cow diet compositions, rapid screening of methane emission reduction, feed beneficial to dairy cow health, and improvement of feed utilization.

Effect of whole oilseeds in the diet on bacterial diversity in the solid fraction of the ruminal content of steers

Our hypothesis was that different whole oilseeds included in the diet for steers confined could alter the diversity of rumen bacteria compared to a diet without oilseeds or an exclusively forage diet. It was aimed to evaluate the effects of oilseeds inclusion in the diet on bacterial diversity in the solid fraction of the ruminal content of steers, by gene sequences of the conserved 16S rDNA region. Six crossbred steers castrated males, fitted with ruminal cannula were used in a 6 × 6 Latin square design, using 21-day period. At the start of the experiment, the live weight of the animals averaged 416 ± 9.7 kg (mean ± SD). A total of 2,180,562 16S rDNA sequences were generated for the Bacteria domain by MiSeq sequencing. The bacterial diversity was composed of 24 bacterial phyla, with the most abundant being Firmicutes, Bacteroidetes, and Proteobacteria. Other phyla with less diversity were also identified including Eurychaeota, Tenericutes, SR1 Absconditalbacteria, Synergistetes, Actinobacteria, Saccharibacteria, Elusimicrobia, Cyanobacteria, Verrucomicrobia, Fusobacteria, Lentisphaerae. The similarity in the bacterial community averaged 50% for all the experimental diets. Steers-fed corn silage exhibited a great diversity of bacteria of the Firmicutes phylum. The steers-fed oilseeds in the diet had a great diversity of bacteria from the phylum Bacteroidetes and Proteobacteria. The inclusion of whole oilseeds in the steer diets can alter the rumen bacteria population by up to 50% of total diversity.

A newly developed bacteriocin like substance to replace monensin in diets of lactating ewes

The aim of the present experiment was to evaluate the effect of feeding a newly produced bacteriocin-like substance (BLS) as a replacement for monensin in the diets of lactating ewes. In Experiment 1, the effects of BLS or monensin at 0.5, 1, 1.5, and 2 g/kg diet on in vitro ruminal fermentation were compared. In Experiment 2, 30 multiparous Barki ewes were divided into three treatments in a complete randomized design for 90 days. The ewes were fed a basal diet without supplementation or supplemented with monensin or BLS at 0.5 g/kg DM diet. In Experiment 1, the highest levels of BLS and monensin decreased gas production, while all levels of additives linearly decreased methane production. In Experiment 2, BLS increased nutrient digestibility. Additives increased ruminal total and individual volatile fatty acids and decreased ruminal ammonia-N. The BLS increased serum albumin and decreased the concentrations of serum liver enzymes, while both additives increased serum glucose and decreased urea-N. Additives increased daily production of milk, while the BLS treatment increased the feed efficiency. It is concluded that dietary inclusion of BLS at 0.5 g/kg DM for lactating ewes is recommended to replace monensin.

A newly developed strain of Enterococcus faecium isolated from fresh dairy products to be used as a probiotic in lactating Holstein cows

The objective of this study was to determine the ability of an isolated strain (EGY_NRC1) or commercial (NCIMB 11181) Enterococcus faecium as a probiotic for lactating cows. Two experiments were conducted: In Experiment 1, the effects of three levels (1, 2, and 3 g/kg diet, DM basis) of isolated and commercial E. faecium on in vitro ruminal fermentation kinetics, gas, methane (CH₄) and nutrient degradability were determined. In Experiment 2, thirty multiparous Holstein cows (633 ± 25.4 kg body weight) with 7 days in milk, were randomly assigned to 3 treatments in a completely randomized design in a 60-day experiment. Cows were fed without any additives (control treatment) or supplemented with 2 g/kg feed daily of E. faecium EGY_NRC1 (contain 1.1 × 10⁹ CFU/g) or commercial E. faecium NCIMB 11181 (contain 2 × 10¹² CFU/g). Diets were prepared to meet cow's nutrient requirements according to NRC recommendations. Probiotic doses were based on the in vitro Experiment 1. Feed intake, digestibility, blood parameters and lactation performance were evaluated. In Experiment 1, the isolated E. faecium linearly and quadratically increased (P < 0.001) in vitro total gas production (TGP), the degradability of dry matter (dDM) and organic matter (dOM) while decreased (P < 0.05) methane (CH₄) percent of TGP, NH₃CH₄ production, and pH. The commercial E. faecium increased TGP and decreased (P < 0.01) CH₄ production, pH and increased the dDM and dOM, short chain fatty acids and ruminal NH₃-N concentration. In Experiment 2, the isolated E. faecium increased (P < 0.01) total tract digestibility of DM, neutral and acid detergent fiber, daily milk production and feed efficiency compared to the control treatment without affecting feed intake and milk composition. Moreover, the isolated E. faecium increased (P < 0.05) the proportion of C18:1 trans-9, C18:2 cis-9-12 and C18:2 trans-10 cis-12. Both isolated and commercial E. faecium improved (P < 0.01) organic matter, crude protein and nonstructural carbohydrates digestibility, increased serum glucose (P = 0.002) and decreased serum cholesterol (P = 0.002). Additionally, both E. faecium strains decreased C23:0 (P = 0.005) in milk. In conclusion, the use of E. faecium (isolated and commercial) at 2 g/kg DM of feed improved feed efficiency and production performance, with superior effects on animal performance from isolated E. faecium compared to the commercial one.

Effect of Dietary Rumen-Degradable Starch to Rumen-Degradable Protein Ratio on In Vitro Rumen Fermentation Characteristics and Microbial Protein Synthesis

The objective of this study was to investigate the effects of dietary rumen-degradable starch (RDS, g/kg of DM) to rumen-degradable protein (RDP, g/kg of DM) ratios (SPR) on in vitro rumen fermentation characteristics and microbial protein synthesis (MCPS). Treatments were eight diets with SPR of 1.9, 2.0, 2.1, 2.2, 2.3, 2.4, 2.5 and 2.6 and were formulated to be isoenergetic, isonitrogenous, and isostarch. Substrates were anaerobically incubated in sealed culture vials (100 mL) for 6, 24 or 48 h. Three incubation runs were conducted within two consecutive weeks. With the increase of the dietary SPR, the gas production (GP), in vitro dry matter disappearance (IVDMD) and concentration of MCPS and total volatile fatty acids (TVFA) linearly increased after 6 h of incubation (p ≤ 0.01), whereas they quadratically increased and peaked at the SPR of 2.3 after 24 and 48 h of incubation (p < 0.05). In response to dietary SPR increasing, the in vitro neutral detergent fiber disappearance (IVNDFD) quadratically increased (p < 0.01), and the ammonia nitrogen (NH3-N) concentration linearly decreased (p < 0.01) after 6, 24 and 48 h of incubation. Based on the presented results, an SPR of 2.3 is recommended for formulating a diet due to its greatest IVDMD, IVNDFD, GP, TVFA and MCPS. However, as the results obtained are strictly dependent on the in vitro conditions, further in vivo studies are needed to verify our findings.

Potential of selected plant extracts to control severe subacute ruminal acidosis in vitro as compared with monensin

Background

In recent years, researchers have become increasingly interested in developing natural feed additives that can stabilize ruminal pH and thus prevent or eliminate the risk of severe subacute rumen acidosis. Herein, 3 experiments were conducted using a semi-automated in vitro gas production technique. In the experiment (Exp.) 1, the efficacy of 9 plant extracts (1.5 mg/ml), compared to monensin (MON; 12 μg/ml), to counteract ruminal acidosis stimulated by adding glucose (0.1 g/ml) as a fermentable carbohydrate without buffer was assessed for 6 h. In Exp. 2, cinnamon extract (CIN) and MON were evaluated to combat glucose-induced acidosis with buffer use for 24 h. In Exp. 3, the effect of CIN and MON on preventing acidosis when corn or barley grains were used as substrate was examined.

Results

In Exp. 1, cinnamon, grape seeds, orange, pomegranate peels, propolis, and guava extracts significantly increased (P < 0.05) pH compared to control (CON). Both CIN and MON significantly increased the pH (P < 0.001) but reduced cumulated gas production (P < 0.01) compared to the other treatments. In Exp. 2, the addition of CIN extract increased (P < 0.01) pH value compared to CON at the first 6 h of incubation. However, no significant differences in pH values between CIN and CON at 24 h of incubation were observed. The addition of CIN extract and MON decreased (P < 0.001) lactic acid concentration and TVFA compared to CON at 24 h. The CIN significantly (P < 0.01) increased acetate: propionate ratio while MON reduced it. In Exp. 3, both CIN and MON significantly increased (P < 0.05) ruminal pH at 6 and 24 h and reduced lactic acid concentration at 24 h compared to CON with corn as substrate. However, CIN had no effect on pH with barley substrate at all incubation times.

Conclusions

It can be concluded that CIN can be used effectively as an alternative antibiotic to MON to control ruminal acidosis when corn is used as a basal diet.

Encapsulated nitrate replacing soybean meal in diets with and without monensin on in vitro ruminal fermentation

This study assessed the association between encapsulated nitrate product (ENP) and monensin (MON) to mitigate enteric methane (CH4) in vitro and possible effects on ruminal degradability, enteric fermentation characteristics, and microbial populations. Six treatments were used in randomized complete design in a 2×3 factorial arrangement with two levels of MON (0 and 2.08 mg/mL of buffered rumen fluid) and three levels of ENP (0, 1.5 and 3.0%). The substrate consisted of 50% Tifton-85 hay and 50% concentrate mixture (ground corn and soybean meal). ENP replaced soybean meal to achieve isonitrogenous diets (15% CP). No ENP×MON interaction was observed for any measured variable (P > 0.05) except for the relative abundance of F. succinogenes (P = 0.02) that linearly increased in diets with MON when ENP was added. The ENP addition decreased CH4 production (P < 0.01) without affecting (P > 0.05) truly degraded organic matter nor the relative abundance of methanogens. Hydrogen production was reduced with MON (P = 0.04) and linearly decreased with ENP inclusion (P = 0.02). We concluded that use of nitrate is a viable strategy for CH4 reduction, however, no additive effect of ENP and MON was observed for mitigating CH4 production.

Rumen Metabolism of Senecio Pyrrolizidine Alkaloids May Explain Why Cattle Tolerate Higher Doses Than Monogastric Species

Rumen metabolism of Senecio pyrrolizidine alkaloids (PAs) and their N-oxide forms was studied by mass spectrometry in in vitro batch culture incubates and confirmed in in vivo samples. Most N-oxides were found to undergo rapid conversion to their corresponding free bases, followed by biotransformation to metabolites hydrogenated at both the necine base and the necic acid moiety. Therefore, rumen metabolism can be considered a detoxification step, as saturated necine base structures are known as the platyphylline type, which is regarded as less or nontoxic. Individual Senecio PAs, such as jacoline, are metabolized slowly during rumen fermentation. PAs that showed limited biotransformation in the rumen in this study also showed limited transformation and CYP-mediated bioactivation in the liver in other studies. This could not only explain why PAs that are comparatively metabolically stable can pass into milk but also suggest that such PAs might be considered compounds of lesser concern.

Quantification of methane emitted by ruminants: a review of methods

The contribution of greenhouse gas (GHG) emissions from ruminant production systems varies between countries and between regions within individual countries. The appropriate quantification of GHG emissions, specifically methane (CH4), has raised questions about the correct reporting of GHG inventories and, perhaps more importantly, how best to mitigate CH4 emissions. This review documents existing methods and methodologies to measure and estimate CH4 emissions from ruminant animals and the manure produced therein over various scales and conditions. Measurements of CH4 have frequently been conducted in research settings using classical methodologies developed for bioenergetic purposes, such as gas exchange techniques (respiration chambers, headboxes). While very precise, these techniques are limited to research settings as they are expensive, labor-intensive, and applicable only to a few animals. Head-stalls, such as the GreenFeed system, have been used to measure expired CH4 for individual animals housed alone or in groups in confinement or grazing. This technique requires frequent animal visitation over the diurnal measurement period and an adequate number of collection days. The tracer gas technique can be used to measure CH4 from individual animals housed outdoors, as there is a need to ensure low background concentrations. Micrometeorological techniques (e.g., open-path lasers) can measure CH4 emissions over larger areas and many animals, but limitations exist, including the need to measure over more extended periods. Measurement of CH4 emissions from manure depends on the type of storage, animal housing, CH4 concentration inside and outside the boundaries of the area of interest, and ventilation rate, which is likely the variable that contributes the greatest to measurement uncertainty. For large-scale areas, aircraft, drones, and satellites have been used in association with the tracer flux method, inverse modeling, imagery, and LiDAR (Light Detection and Ranging), but research is lagging in validating these methods. Bottom-up approaches to estimating CH4 emissions rely on empirical or mechanistic modeling to quantify the contribution of individual sources (enteric and manure). In contrast, top-down approaches estimate the amount of CH4 in the atmosphere using spatial and temporal models to account for transportation from an emitter to an observation point. While these two estimation approaches rarely agree, they help identify knowledge gaps and research requirements in practice.

Nutritional Value, Fermentation Characteristics and In Vitro Degradability of Whole Wheat Hay Harvested at Three Stages of Maturity

The nutritional value of whole crop wheat hay (WCWH) harvested at different maturation stages are different, and its feeding effects on dairy cows have not been thoroughly evaluated. In this study, the in vitro digestibility of whole wheat (Nongda 22) hay harvested during the flowering, late milk and dough stages were evaluated using batch culture technique. The neutral detergent fiber (NDF) and acid detergent fiber (ADF) contents of whole wheat hay decreased by 35.5% and 40.4%, respectively, whereas the non-fibrous carbohydrates (NFC) content increased by 50.3% in WCWH harvested during the dough stage as compared to the flowering stage (p < 0.01). The pH of the fermentation liquid and acetate to propionate ratio was greatest in the wheat harvested during the flowering stage and lowest during the dough stage (p = 0.03), whereas the volatile fatty acid (VFA) concentration was greatest during the dough stage and lowest during the flowering stage (p < 0.01). The dry matter loss (DML) was 9.6% and 6.2% greater (p < 0.01) during the late milk stage than in the flowering or dough stages, and the NDF loss (NDFL; p = 0.01) and ADF loss (ADFL; p < 0.01) was greater in both the flowering and late milk stages. In conclusion, though the content of NDF was lower in the dough stage, and the starch to NFC ratio was greater, we determined that the optimal harvest stage should be the late milk stage due to the greater dry matter digestibility, the relatively greater NFC content and the shorter planting days.

Impact of Oil Sources on In Vitro Fermentation, Microbes, Greenhouse Gas, and Fatty Acid Profile in the Rumen

This study estimated the effects of oil sources on fermentation characteristics, greenhouse gas, microbial diversity, and biohydrogenation of fatty acids in the rumen. In vitro ruminal incubation was performed with 7 mg of oil source, 15 mL rumen buffer, and 150 mg of synthetic diet at 39 °C for 0, 3, 6, 12, and 24 h. Oil sources consisted of corn oil (CO; linoleic acid (C18:2n-6)), linseed oil (LSO; linolenic acid (C18:3n-3)), or Ca-salts (protected C18:2n-6). The ruminal gas was collected for CH4 and CO2 analysis. Incubated rumen buffer was sub-sampled for the analysis of microbial quantification, fermentation characteristics, and fatty acid profiles. The results showed that Ca-salt increased acetate (p = 0.013), while CO increased propionate (p = 0.007). Fibrobacter succinogenes, Ruminococcus flavefaciens, and R. albus increased (p < 0.05) with Ca-salt after 12 h of incubation, while Streptococcus bovis increased (p < 0.05) by LSO. The CO and Ca-salt resulted in the highest C18:2n-6 (p = 0.002), while LSO resulted in the highest C18:3n-3 (p = 0.001). The Ca-salt had the lowest C18:0 (p = 0.002), but the highest C18:1cis-9 (p = 0.004). In conclusion, Ca-salt supplementation resisted biohydrogenation to some extent, decreased methanogenic archaea and protozoa, and exerted less toxic effects on fibrolytic bacteria.

Essential Oils as In Vitro Ruminal Fermentation Manipulators to Mitigate Methane Emission by Beef Cattle Grazing Tropical Grasses

There is increasing pressure to identify natural feed additives to mitigate methane emissions from livestock systems. Our objective was to investigate the effects of essential oils (EO) extracts star anise (Illicium verum), citronella (Cymbopogon winterianus), clove bud (Eugenia caryophyllus), staigeriana eucalyptus (Eucalyptus staigeriana), globulus eucalyptus (Eucalyptus globulus), ginger (Zingiber officinale), ho wood (Cinnamomum camphora), melaleuca (Melaleuca alternifolia), oregano (Origanum vulgare) and white thyme (Thymus vulgaris) on in vitro methane emissions from four rumen-cannulated Nellore cattle grazing a tropical grass pasture as inoculum donors. The semi-automated gas production technique was used to assess total gas production, dry matter degradability, partitioning factor, ammoniacal nitrogen, short-chain fatty acids and methane production. All essential oils were tested in four doses (0, 50, 250 and 500 mg/L) in a randomized block design, arranged with four blocks, 10 treatments, four doses and two replicates. Within our study, oregano and white Thyme EO reduced net methane production at 250 mg/L, without affecting substrate degradation. Essential oils from oregano and white thyme have the potential to modify ruminal fermentation and suppress rumen methanogenesis without negative effects on feed digestibility, indicating promise as alternatives to ionophores for methane reduction in beef cattle.

Technical note: design, development and validation of an automated gas monitoring equipment for measurement of the dynamics of microbial fermentation

The present technical note describes design, development and validation of an automated equipment for measurement of kinetics of gas production during fermentation in glass bottles. The overall repeatability and precision of the developed system was evaluated and compared with the manual gas measurement technique in respect to characterization of the fermentation kinetics of ruminant livestock feeds. Two incubations were carried out, during which the GP of six different feeds was measured with the automated system or manual technique. During a 48-hour incubation period, pressure data were collected at 15-minute intervals using automated equipment, yielding 192 head-space pressure measurements for each bottle. In manual measurement, incubations were performed with the nominal 60-mL serum bottle, and headspace pressure was read using a digital pressure gauge and then released at 2, 4, 6, 8, 12, 16, 24, 36, and 48 hours of incubation. The automated equipment recorded greater GP (+11.5%, over the 48-h incubation) than the manual measurement, and the repeatability and coefficient of repeatability values indicated that the GP data obtained with manual equipment were less repeatable. The automated equipment measures the fermentative GP kinetics with greater precision and repeatability than manual technique.•

An automated batch GP equipment was designed, developed and validated, and a comparison was made with GP data obtained manually using a digital pressure gauge.

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The automated equipment provided more reliable and repeatable data compared with manual measurement.

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The automated equipment is available with lower cost and more functionality.

In vitro Fermentation Profile and Methane Production of Kikuyu Grass Harvested at Different Sward Heights

Highly digestible forages are associated with an in vitro low-methane (CH4) rumen fermentation profile and thus the possibility of reducing CH4 emissions from forage-based systems. We aimed to assess the in vitro ruminal fermentation profile, including CH4 production, of the top stratum of Kikuyu grass (Cenchrus clandestinus - Hochst. ex Chiov) harvested at different sward heights (10, 15, 20, 25, and 30 cm). Herbage samples (incubating substrate) were analyzed for their chemical composition, in vitro organic matter digestibility (IVOMD), and morphological components. In vitro incubations were performed under a randomized complete block design with four independent runs of each treatment. Gas production (GP), in vitro dry matter digestibility (IVDMD), CH4 production, total volatile fatty acid (VFA) concentration, and their acetate, propionate, and butyrate proportions were measured following 24 and 48 h of incubation. Herbage samples had similar contents of organic matter, neutral detergent fiber, and crude protein for all treatments. However, a higher acid detergent fiber (ADF) content in taller sward heights than in smaller sward heights and a tendency for metabolizable energy (ME) and IVOMD to decrease as sward height increased were found. Similarly, the stem + sheath mass tended to increase with increasing sward height. Amongst the nutrients, ME (r = −0.65) and IVDMD (r = −0.64) were negatively correlated with sward height (p &lt; 0.001) and ADF was positively correlated with sward height (r = 0.73, p &lt; 0.001). Both the GP and IVDMD were negatively related to the sward height at both incubation times. Sward heights of Kikuyu grass below 30 cm display an in vitro profile of VFAs high in propionate and low in acetate, with a trend toward lower methane production of CH4 per unit of IVDMD. These findings are important to aid decision-making on the optimal sward height of Kikuyu grass and manage animal grazing with the opportunity to reduce CH4 production.

Study on the Effect of Ensiling Process and Ruminal Digestion on the Synthesis and Release of Cyclopropane Fatty Acids in Cow Feeding

Cyclopropane fatty acids (CPFA) were found in milk fat from cows fed maize silage and suggested to be synthesized by lactic acid bacteria during ensiling. This study aimed to elucidate some gaps of knowledge about the microbial synthesis of CPFA, to strengthen the current authentication method based on their detection in cheese fat and performed for Parmigiano Reggiano (UNI11650), whose Specifications forbid the use of silage. CPFA were screened in different ensiled cows' feeding by gas chromatography-mass spectrometry, and the effect of feed ingredients and ruminal digestion on CPFA microbial production were further examined by in vitro tests. Results showed that solely the environmental conditions developed in silos for specific plant materials (e.g., maize) are essential for the bacterial synthesis of CPFA, whereas rumen activity did not affect CPFA levels in feeds. This supports the suitability of using CPFA as biomarkers of a crop silage-based diet forbidden by certain PDO feedstock regulations.

Solid State Fermentation as a Tool to Stabilize and Improve Nutritive Value of Fruit and Vegetable Discards: Effect on Nutritional Composition, In Vitro Ruminal Fermentation and Organic Matter Digestibility

Simple Summary

A huge quantity of fruits and vegetables are wasted every year, having a negative impact in both the economy and the environment. Valorizing them as animals’ feeds would contribute to reduce feeding cost and, at the same time, would be in the interest of prevention of resource wastage and better economy of the processing plants. The aim of this study was, on the one side, to transform fruit and vegetable discards using solid state fermentation (SSF) to a stabilized product enriched in protein and, on the other side, to evaluate its suitability for ruminants feeding by determining the in vitro organic matter digestibility, fermentation characteristics and methane production of the control and the fermented product. As a result, it was found that SSF reduced the organic matter and reducing sugar content of the fermented product, while crude protein and fiber fractions were increased. In conclusion, SSF led to a stabilized feed ingredient enriched in protein, but at the expense of digestibility reduction.

Abstract

This research aimed to evaluate in vitro organic matter digestibility, fermentation characteristics and methane production of fruit and vegetable discards processed by solid state fermentation (SSF) by Rhizopus sp. Mixtures were composed of approximately 28% citric fruits, 35% other fruits and 37% vegetables. Fruit and vegetables were processed and fermented to obtain a stabilized product. Nutritional characterization and in vitro ruminal fermentation tests were performed to determine the effect of fungal bioconversion on digestibility, end products and gas production kinetics. Results indicate that SSF reduced organic matter and reducing sugars, while it increased crude protein and neutral detergent fiber, acid detergent fiber and neutral detergent insoluble protein. The in vitro gas production showed that SSF led to a reduction of the organic matter digestibility (p < 0.001), short chain fatty acids (SCFA; p = 0.003) and CH₄ (p = 0.002). SSF reduced the gas production from the insoluble fraction (p = 0.001), without modifying the production rate (p = 0.676) or the lag time (p = 0.574). Regarding SCFA profile, SSF increased acetic (p = 0.020) and decreased propionic (p = 0.004) and butyric (p = 0.006) acids proportions, increasing acetic to propionic (p = 0.008) and acetic plus butyric to propionic (p = 0.011) ratios. SSF succeeded in obtaining a stabilized material enriched in protein, but at the expense of a reduction of protein availability and organic matter digestibility. These changes should be considered before including them in a ruminant’s rations.

An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum

Gas production profiles typically show a monotonically increasing monophasic pattern. However, atypical gas production profiles exist whereby at least two consecutive phases of gas production or additional extraneous features that distort the typical profile are present. Such profiles are more likely to occur with the use of a fecal inoculum and are much less well described. The presence of multiple phases or non-descript extraneous features makes it difficult to apply directly recommended modeling approaches such as standard response functions or classical growth functions. To overcome such difficulties, extensions of the Mitscherlich equation and a numerical modeling option also based on the Mitscherlich are explored. The numerical modeling option uses an estimate of relative rate obtained from the smoothed data profile and an estimate of maximum gas produced together with any lag time information drawn from the raw data to construct a simple Mitscherlich equation. In summary, this article illustrates the analysis of atypical gas production profiles obtained using a fecal inoculum and explores the methodology of numerical modeling to reconstruct equivalent typical growth-like trends.

Effects of a xylanase-rich enzyme on intake, milk production, and digestibility of dairy cows fed a diet containing a high proportion of bermudagrass silage

We previously reported that milk production in dairy cows was increased by adding a specific xylanase-rich exogenous fibrolytic enzyme (XYL) to a total mixed ration (TMR) containing 10% bermudagrass silage (BMD). Two follow-up experiments were conducted to examine whether adding XYL would increase the performance of dairy cows consuming a TMR containing a higher (20%) proportion of BMD (Experiment 1) and to evaluate the effects of XYL on in vitro fermentation and degradability of the corn silage, BMD, and TMR (Experiment 2). In Experiment 1, 40 lactating Holstein cows in early lactation (16 multiparous and 24 primiparous; 21 ± 3 d in milk; 589 ± 73 kg of body weight) were blocked by milk yield and parity and randomly assigned to the Control and XYL treatments. The TMR contained 20% BMD, 25% corn silage, 8% wet brewer's grain, and 47% concentrate mixture in the dry matter (DM). Cows were fed the XYL-treated or untreated experimental TMR twice per day for 10 wk after a 9-d covariate period. In Experiment 2, ruminal fluid was collected from 3 cannulated lactating Holstein cows fed a diet containing 20% bermudagrass haylage, 25% corn silage and 55% concentrate. In Experiment 1, compared with Control, application of XYL did not affect DM intake (24.0 vs. 23.7 kg/d), milk yield (35.1 vs. 36.2 kg/d), fat-corrected milk yield (36.1 vs. 36.9 kg/d), or yields of milk fat (1.29 vs. 1.31 kg/d) or protein (1.07 vs. 1.08 kg/d). However, intake of neutral detergent fiber (4.67 vs. 4.41 kg/d) tended to increase with XYL; consequently, milk protein concentration was increased by XYL (3.02 vs. 2.95%). Feed efficiency tended to be lower in cows fed XYL (1.57 vs. 1.52 kg of fat-corrected milk/kg of DM intake) compared with Control. In Experiment 2, XYL tended to increase the rate of gas production in the TMR, the molar proportion of propionate for corn silage, and that of valerate for the TMR. In addition, XYL increased in vitro DM, neutral detergent fiber, and acid detergent fiber degradability of BMD and corn silage. Application of XYL to a diet with a relatively high proportion of BMD tended to increase digestible neutral detergent fiber intake, increased milk protein concentration, and in vitro degradability of DM, neutral detergent fiber, and acid detergent fiber. However, XYL did not affect milk production and tended to decrease feed efficiency in early lactation cows.

Effects of Essential Fatty Acid Supplementation on in vitro Fermentation Indices, Greenhouse Gas, Microbes, and Fatty Acid Profiles in the Rumen

This study estimated the effect of essential fatty acid (FA) supplementation on fermentation indices, greenhouse gases, microbes, and FA profiles in the rumen. The treatments used pure FAs consisting of C18:2n-6 FA (LA), C18:3n-3 FA (LNA), or a mixture of these FAs at 1:1 ratio (Combo). In vitro rumen incubation was performed in 50 mL glass serum bottles containing 2 mg of pure FAs, 15 mL of rumen buffer (rumen fluid+anaerobe culture medium = 1:2), and 150 mg of synthetic diet (411 g cellulose, 411 g starch, and 178 g casein/kg dry matter) at 39°C for 8 h with five replications and three blanks. In rumen fermentation indices, LA exhibited highest (P < 0.05) ammonia-N and total gas volume after 8 h of incubation. Furthermore, LA presented lower (P < 0.05) pH with higher (P < 0.05) total volatile fatty acid (P = 0.034) than Combo, while LNA was not different compared with those in the other treatments. Additionally, Combo produced highest (P < 0.05) CO₂ with lowest (P < 0.05) CH₄. In the early hours of incubation, LA improved (P < 0.005) Fibrobacter succinogenes and Ruminococcus flavefaciens, while LNA improved (P < 0.005) Ruminococcus albus. After 8 h of incubation, LNA had lower (P < 0.05) methanogenic archaea than LA and Combo but had higher (P < 0.05) rumen ciliates than LA. R. albus was higher (P < 0.05) in LA than in LNA and Combo. It was observed that the rate of biohydrogenation of n-6 and n-3 FAs was comparatively lowest (P < 0.05) in Combo, characterized by higher C18:2n-6 and/or C18:3n-3 FA and polyunsaturated FA (PUFA) concentrations with lower (P < 0.05) concentrations of C18:0 and saturated FA and the ratio of saturated FAs to PUFAs. Therefore, this study concluded that dietary C18:2n-6 could improve populations of fibrolytic bacteria and rumen fermentation indices, but dietary mixture of pure C18:2n-6 and C18:3n-3 is recommended because it is effective in reducing enteric methane emissions and resisting biohydrogenation in the rumen with less effect on rumen microbes.

An Assessment of the Viability of Lytic Phages and Their Potency against Multidrug Resistant Escherichia coli O177 Strains under Simulated Rumen Fermentation Conditions

Preslaughter starvation and subacute ruminal acidosis in cattle are known to promote ruminal proliferation of atypical enteropathogenic Escherichia coli strains, thereby increasing the risk of meat and milk contamination. Using bacteriophages (henceforth called phages) to control these strains in the rumen is a potentially novel strategy. Therefore, this study evaluated the viability of phages and their efficacy in reducing E. coli O177 cells in a simulated ruminal fermentation system. Fourteen phage treatments were allocated to anaerobic serum bottles containing a grass hay substrate, buffered (pH 6.6–6.8) bovine rumen fluid, and E. coli O177 cells. The serum bottles were then incubated at 39 °C for 48 h. Phage titres quadratically increased with incubation time. Phage-induced reduction of E. coli O177 cell counts reached maximum values of 61.02–62.74% and 62.35–66.92% for single phages and phage cocktails, respectively. The highest E. coli O177 cell count reduction occurred in samples treated with vB_EcoM_366B (62.31%), vB_EcoM_3A1 (62.74%), vB_EcoMC3 (66.67%), vB_EcoMC4 (66.92%), and vB_EcoMC6 (66.42%) phages. In conclusion, lytic phages effectively reduced E. coli O177 cells under artificial rumen fermentation conditions, thus could be used as a biocontrol strategy in live cattle to reduce meat and milk contamination in abattoirs and milking parlours, respectively.

Cultivating oyster mushrooms on red grape pomace waste enhances potential nutritional value of the spent substrate for ruminants

The use of red grape pomace (GP; Vitis vinifera L. var. Shiraz) as a source of beneficial bioactive compounds in ruminant diets is limited by high levels of indigestible compounds in the grape skin matrix. This problem demands innovative, inexpensive, and easy-to-use strategies that improve the digestibility of GP. The bioconversion of GP using edible oyster mushrooms (Pleurotus ostreatus) is one such strategy that has not been previously explored. Therefore, this study evaluated the effect of cultivating oyster mushrooms on GP on chemical composition and in vitro ruminal fermentation parameters of the spent mushroom substrate. The GP was inoculated with oyster mushroom spawns at 0, 200, 300, 400, or 500 g/kg, and incubated for 4 weeks. Organic matter, acid detergent lignin, sodium, manganese, cobalt, and copper linearly declined (P < 0.05) as spawn rates increased. A quadratic trend was observed for crude protein, neutral detergent fibre, acid detergent fibre, magnesium, phosphorus, and calcium content in response to increasing spawn rates. Higher spawning rates (20–50%) had a positive effect (P < 0.05) on gas production from the immediately fermentable fraction (a), rate of gas production from the slowly fermentable fraction (c) and effective gas production. However, gas production from the slowly fermentable fraction (b) and potential gas production linearly declined in response to increasing spawning rates. There was a linear increase (P < 0.05) in the immediately degradable fraction (a), while quadratic effects were observed for partition factors, effective degradability, and in vitro organic matter degradability at 48 h in response to spawning rates. It can be concluded that inoculating GP with oyster mushroom spawn reduced fibre content while increasing crude protein content and in vitro ruminal fermentation efficiency of red grape pomace. Based on the quadratic responses of partition factors at 48 hours post-inoculation, the optimum spawning rate for maximum ruminal fermentation efficiency of GP was determined to be 300 g/kg.

Conserving purple prairie clover (Dalea purpurea Vent.) as hay and silage had little effect on the efficacy of condensed tannins in modulating ruminal fermentation in vitro

BACKGROUND

The objective of this study was to determine the effects of forage conservation method and condensed tannins (CT) in conserved forage on rumen fermentation. Purple prairie clover (PPC; Dalea purpurea Vent.) containing 84.5 g kg^-1 dry matter (DM) of CT was harvested at full flower and preserved as freeze-dried green chop (F), hay (H) or silage (S). Batch culture incubations were conducted using conserved forages as a substrate and treatments were arranged as 3 × 2 factorial design of forage type (F, H and S) with or without polyethylene glycol (PEG). PEG was used to isolate the effects of CT on fermentation. Incubation was repeated twice with quadruplicate vials for each treatment in each incubation. ¹⁵ N-labelled ammonium sulfate was used as microbial N marker and headspace gas was sampled to determine methane production.

RESULTS

Concentrations of neutral detergent fiber (NDF) and acid detergent fiber were lower (P < 0.01) in F than in H or S. Ensiling decreased (P < 0.001) total phenolics and extractable CT, but had no effect on total CT, whereas none of these phenolic fractions were altered in H. Hay and silage had lower (P < 0.01) true DM disappearance (TDMD) and NDF disappearance (NDFD) than F. Inclusion of PEG did not affect TDMD or NDFD after 8, 24 or 72 h of incubation. Productions of total gas, methane and total volatile fatty acid and the rate of gas production (c) were also similar, but ammonia was higher (P < 0.05) and microbial N was lower (P < 0.05) with than without PEG after 72 h of incubation. After 72 h, a lower (P < 0.001) proportion of acetate but higher (P < 0.05) proportion of propionate was noted with S, resulting in a lower (P < 0.001) acetate:propionate ratio as compared to F or H after 8 h of incubation.

CONCLUSION

Condensed tannins in PPC decreased protein degradation in vitro, but had minimal effects on overall rumen fermentation, and conservation of PPC as hay or silage had little effect on the efficacy of CT in modulating rumen fermentation. © 2020 Her Majesty the Queen in Right of Canada. Journal of The Science of Food and Agriculture © 2020 Society of Chemical Industry.

Potential use of cassava by-product as ruminant feed

Cassava (Manihot esculenta Crantz) bagasse is the by-product from industry (BCI), generated during manufacturing of cassava flour; this material has significant amounts of carbohydrates consisting in a potential energy source for ruminants. We hypothesized that the inclusion of BCI in the diets may lead to fermentation parameters equivalent to those of conventional feedstuff such as tropical grasses or grains; therefore, we aimed to evaluate ruminal fermentation parameters of BCI in in vitro conditions. Three different substrates were prepared: 100% BCI (BCI diet), 100% tifton (Cynodon spp.) hay (CTL diet), and 50% tifton hay +50% BCI (THB diet). Ruminal fermentation parameters of these diets were evaluated in in vitro gas production assays. In a 24-h incubation, increased values for total gas production, organic matter degradability, and methane production were observed for BCId and THB as compared to CTL (p < 0.05), while neutral THB showed the highest value for neutral detergent fiber degradability (p < 0.05). Fermentation profile was evaluated in a 48-h assay: shorter lag time as well as increased gas production potential and fractional fermentation rate were observed for the BCId and THB as compared to CTL (p < 0.05). Our results suggested that by-product from cassava industry is a suitable feed for ruminant production, providing desirable in vitro ruminal fermentation performance and organic matter degradability.

Strategic supplementation of growing cattle on tropical pastures improves nutrient use and animal performance, with fewer days required on the finishing phase

Context Cattle grazing tropical forages usually perform below genetic potential due to limited nutrient intake. Aims Four experiments were conducted to evaluate supplementation strategies on performance and metabolism of cattle grazing intensively managed marandu palisade grass (Urochloa brizantha). Methods Experiment 1 evaluated the average daily gain (ADG) of 72 young bulls (222 ± 25 kg bodyweight, BW) grazing palisade grass and supplemented (22% crude protein, CP) at 0.0%, 0.3%, 0.6% and 0.9% BW, and their ADG during the feedlot finishing phase. Experiment 2 evaluated the ADG of 80 bulls (240 ± 18 kg BW) grazing palisade grass and supplemented with energy (11.3% CP) or three protein sources (≈20.5% CP) at 0.6% BW. Experiment 3 investigated intake, rumen parameters and digestibility of nutrients in fistulated steers (410 ± 8.6 kg BW) fed an energy supplement, that is, ground corn, at 0.0%, 0.3%, 0.6% and 0.9% BW, with a parallel in vitro study of fermentation kinetics (Experiment 4). Key results Increased levels of supplementation resulted in linear increases (P &lt; 0.05) in ADG, stocking rate (SR) and in BW gain per area. There were no differences (P &gt; 0.05) in ADG, SR and BW gain per area among supplemental sources of protein or the energy supplement. Increasing energy levels caused a linear decrease (P &lt; 0.05) in forage intake and grazing time and a linear increase (P &lt; 0.05) in total dry matter and digestible-nutrient intakes, but did not affect (P &gt; 0.05) fibre degradability. Corn supplementation also caused a linear decrease (P &lt; 0.05) in acetate:propionate ratio, in ruminal ammonia-N and in N excretion, and a linear increase (P &lt; 0.05) in rumen propionate concentration, in microbial synthesis and in N retention. The supplementation increased BW at the start of the feedlot phase, resulting in similar hot carcass weights with fewer days on feed and no effects on meat quality. Conclusions Overall, despite the source utilised, supplementation increased ADG, SR and BW gain per area, with fewer days being required on the finishing period. Implications Having adequate supplementation strategies in place will help producers increase the efficiency of their systems.

Tannin-rich forage as a methane mitigation strategy for cattle and the implications for rumen microbiota

Context Methane from ruminant livestock systems contributes to the greenhouse effect on the environment, which justifies the adoption of novel feed strategies that mitigate enteric emissions. Aims We investigated the effects of the condensed tannin (CT)-rich legumes Flemingia macrophylla, Leucaena leucocephala, Stylosanthes guianensis, Gliricidia sepium, Cratylia argentea, Cajanus cajan, Desmodium ovalifolium, Macrotyloma axillare, Desmodium paniculatum and Lespedeza procumbens on in vitro methane emissions and rumen microbiota for beef cattle. Methods Four rumen-cannulated Nellore cattle grazing a tropical grass pasture were used as inoculum donors. Key results Real-time quantitative polymerase chain reaction analysis revealed that the abundance of Ruminococcus flavefaciens, methanogenic archaea and protozoa populations were reduced (P £ 0.05), whereas total ruminal bacteria were enhanced in the presence of CT. Our study also revealed a positive (P £ 0.05) relationship between CT and Fibrobacter succinogenes abundance. Reactive CT from L. leucocephala, D. paniculatum and L. procumbens resulted in decreased (P £ 0.05) isoacid content and methane production. Conclusions L. leucocephala, D. paniculatum and L. procumbens have the potential to suppress rumen methanogenesis. However, in vitro fermentation of L. leucocephala resulted in greater (P £ 0.05) degradability percentages than the other two species. Implications CT in legume species will have potential as part of an overall nutritional strategy to manipulate rumen microbiota and mitigate enteric methanogenesis in livestock production systems.

Influence of the storage period on the nutritional and microbiological value of sun-dried brewer’s grains

Background: Brewer's grains, a by-product of the brewery industry, can be included in the diet of ruminants. However, its high humidity makes it difficult to store and preserve. Objective: To evaluate the efficiency of sun dehydration of wet brewer’s grains (WBG) and the effect of storage period on its nutritional and microbiological quality. Methods: A completely randomized experimental design was used to evaluate WBG dehydration efficiency, with treatments corresponding to 0, 1, 2, 4, 6, 8, 10, 12, 14 and 16 hours of sun exposure. A second experiment was carried out using also a completely randomized design to evaluated the effect of storage with the following treatments: 0, 10, 20, 30, 60, 90, 120, 150 and 180 days of storage of the dry by-product. Results: Dry matter (DM) content linearly increased with dehydration period. The chemical composition of the dried brewer's grains had no effect as a function of storage period. Indigestible protein (C fraction) increased linearly but did not compromise the cumulative gas production and the in vitro digestibility of DM and protein. Storage time had no effect on fungus population. The maximum aflatoxin value was 45.5 μg/kg, and remained within acceptable limits for bovine feed. Conclusion: Dehydration of WBG in the sun is efficient to guarantee conservation and makes it possible to store the by-product. The storage of the dry by-product for 180 days does not compromise its nutritional or microbiological quality.

Valor nutricional do capim-elefante verde colhido em diferentes idades de rebrota

RESUMO Avaliou-se o valor nutricional do capim-elefante verde colhido aos 56, 84 e 112 dias de idade, por meio do consumo e da digestibilidade em ovinos, da degradabilidade in situ e da cinética da fermentação ruminal. O capim-elefante colhido aos 56 dias proporcionou maiores valores de consumo da MS (1204,81g/dia), da EB (4910,41kcal/dia), da ED (3436,21kcal/dia) e da PB (130,90g/dia). Para o capim-elefante colhido aos 56 dias, ainda foram observados os maiores valores de digestibilidade da MS (70,64%), da EB (70,11%), da PB (68,96%), da FDN (71,4%) e do conteúdo ED (2,86Mcal/kg MS). Com o avanço da idade de corte, houve redução da degradabilidade potencial da MS (77,99% x 68,33%), da PB (84,80% x 56,52%) e da FDN (72,18% x 64,33%), para as idades de corte de 56 e 112 dias, respectivamente. O capim cortado aos 56 dias apresentou maior valor de produção cumulativa de gases (210,50mL/g de MS) e de degradabilidade da matéria seca (63,9%) após 96 horas de fermentação. O capim-elefante verde deve ser colhido aos 56 dias de rebrota em razão das características nutricionais apresentadas.

Solid-state fermentation with Pleurotus ostreatus improves the nutritive value of corn stover-kudzu biomass

A batch culture technique was used to evaluate dry matter (DM) digestibility of corn stover (Zea mays L.) and kudzu, Pueraria montana (Lour.) Merr. after solid-state fermentation (SSF) with a white-rot fungus, Pleurotus ostreatus (Jacq. ex Fr.) P. Kumm. Five dietary treatments consisting of mixtures of corn stover (C) and kudzu (K) in varying ratios, (1) 100C:0K, (2) 75C:25K, (3) 50C:50K, (4) 25C:75K, and (5) 0C:100K, were inoculated with P. ostreatus (MBFBL 400) and subjected to SSF for 0, 35, and 77 days. The study was arranged as a 5 × 3 factorial design with 3 replicates. Grass hay was included in the study as a control. Interactions (P < 0.05) between treatments and fermentation time were noted for the fermentation kinetics. Asymptotic gas was the highest (P < 0.05) for 0C:100K and 100C:0K on day 77. Treatment effect (P < 0.001) and treatment × fermentation time interaction (P < 0.001) were noted for in vitro dry matter digestibility (IVDMD). On day 77, treatment 4 had the highest (P < 0.001) IVDMD value, while treatment 1 had the lowest (P < 0.001) IVDMD. There was no difference (P > 0.05) between treatments 3, 5, and control. Numerically, the ranking of their IVDMD values from the highest to the lowest is 4 > 2 > 5 > control >3 > 1. The results show that the treated corn stover and kudzu mixes were comparable with the control, which is good quality hay. This is the first report that demonstrates the potential use of a combined mixture of corn stover and kudzu in ruminant animal feed development.

Tannin-Rich Plants as Natural Manipulators of Rumen Fermentation in the Livestock Industry

Condensed tannins (CTs) are plant anti-herbivore compounds with antimicrobial activity that can be used in ruminant diets as ruminal microbiome manipulators. However, not all CTs from fodder legumes are bioactive due to their wide structural diversity. The aim of our study was to investigate the effect of 10 CT-containing plants (Flemingia macrophylla, Leucaena leucocephala, Stylosanthes guianensis, Gliricidia sepium, Cratylia argentea, Cajanus cajan, Desmodium ovalifolium, Macrotiloma axilare, D. paniculatum, and Lespedeza procumbens) on in vitro fermentation kinetics of Nelore beef cattle. Polyethylene glycol (PEG), a specific CT-binding agent, was added to neutralize condensed tannin. Tifton and alfalfa hay were used as controls lacking CT. The experimental layout included a randomized complete block with factorial design and four blocks. The data were subjected to analysis of variance followed by Duncan’s test to determine differences (p < 0.05) among treatment means. The addition of PEG in browse incubations resulted in increased gas production, fermentation rate, short-chain fatty acid (SCFA) and N-NH₃ release. Within our study, Lespedeza procumbens, Desmodium paniculatum, Leucaena leucocephala, Desmodium ovalifolium, and Flemingia macrophylla showed superior bioactivity compared to other species evaluated, suggesting a natural alternative for replacing ionophores to modify ruminal fermentation. Condensed tannins from L. pocumbens, D. paniculatum, L. leucocephala, D. ovalifolium, and F. macrophylla have the potential to modify rumen fermentation in beef cattle.