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For: Kercher MA, Lu P, Lewis M. Lac repressor-operator complex. Curr Opin Struct Biol 1997;7:76-85. [PMID: 9032054 DOI: 10.1016/s0959-440x(97)80010-3] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Number Cited by Other Article(s)
1
Smith AJ, Thomas F, Shoemark D, Woolfson DN, Savery NJ. Guiding Biomolecular Interactions in Cells Using de Novo Protein-Protein Interfaces. ACS Synth Biol 2019;8:1284-1293. [PMID: 31059644 DOI: 10.1021/acssynbio.8b00501] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
2
Sengupta R, Capp MW, Shkel IA, Record MT. The mechanism and high-free-energy transition state of lac repressor-lac operator interaction. Nucleic Acids Res 2017;45:12671-12680. [PMID: 29036376 PMCID: PMC5727403 DOI: 10.1093/nar/gkx862] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Accepted: 09/22/2017] [Indexed: 01/06/2023]  Open
3
Leng F. Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects. Biophys Rev 2017;8:123-133. [PMID: 28510217 DOI: 10.1007/s12551-016-0239-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 05/27/2016] [Indexed: 12/18/2022]  Open
4
Leng F. Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects. Biophys Rev 2016;8:197-207. [PMID: 28510223 DOI: 10.1007/s12551-016-0204-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 05/27/2016] [Indexed: 12/15/2022]  Open
5
Amara AAAF. An overview of the molecular and cellular interactions of some bioactive compounds. BIOTECHNOLOGY OF BIOACTIVE COMPOUNDS 2015:525-554. [DOI: 10.1002/9781118733103.ch21] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
6
Koike R, Ota M, Kidera A. Hierarchical Description and Extensive Classification of Protein Structural Changes by Motion Tree. J Mol Biol 2014;426:752-62. [DOI: 10.1016/j.jmb.2013.10.034] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2013] [Revised: 10/24/2013] [Accepted: 10/28/2013] [Indexed: 11/25/2022]
7
Vidangos N, Maris AE, Young A, Hong E, Pelton JG, Batchelor JD, Wemmer DE. Structure, function, and tethering of DNA-binding domains in σ⁵⁴ transcriptional activators. Biopolymers 2013;99:1082-96. [PMID: 23818155 PMCID: PMC3932985 DOI: 10.1002/bip.22333] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2013] [Accepted: 06/18/2013] [Indexed: 11/07/2022]
8
Baetu TM. Genes after the human genome project. STUDIES IN HISTORY AND PHILOSOPHY OF BIOLOGICAL AND BIOMEDICAL SCIENCES 2012;43:191-201. [PMID: 22326088 DOI: 10.1016/j.shpsc.2011.10.022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2011] [Revised: 08/20/2011] [Accepted: 10/16/2011] [Indexed: 05/31/2023]
9
Preparation of a bio-immunoreagent between ZZ affibody and enhanced green fluorescent protein for immunofluorescence applications. World J Microbiol Biotechnol 2011;28:1281-5. [DOI: 10.1007/s11274-011-0761-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2011] [Accepted: 04/19/2011] [Indexed: 10/18/2022]
10
Chen B, Xiao Y, Liu C, Li C, Leng F. DNA linking number change induced by sequence-specific DNA-binding proteins. Nucleic Acids Res 2010;38:3643-54. [PMID: 20185570 PMCID: PMC2887952 DOI: 10.1093/nar/gkq078] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
11
Crystal structure of the manganese transport regulatory protein fromEscherichia coli. Proteins 2009;77:741-6. [DOI: 10.1002/prot.22541] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
12
Satya Lakshmi O, Rao N. Evolving Lac repressor for enhanced inducibility. Protein Eng Des Sel 2008;22:53-8. [DOI: 10.1093/protein/gzn069] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
13
Liu J, Zheng Q, Deng Y, Li Q, Kallenbach NR, Lu M. Conformational specificity of the lac repressor coiled-coil tetramerization domain. Biochemistry 2007;46:14951-9. [PMID: 18052214 DOI: 10.1021/bi701930d] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
14
Deng Y, Liu J, Zheng Q, Eliezer D, Kallenbach NR, Lu M. Antiparallel four-stranded coiled coil specified by a 3-3-1 hydrophobic heptad repeat. Structure 2006;14:247-55. [PMID: 16472744 PMCID: PMC7126439 DOI: 10.1016/j.str.2005.10.010] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2005] [Revised: 09/30/2005] [Accepted: 10/12/2005] [Indexed: 11/24/2022]
15
Winkler WC, Breaker RR. Regulation of bacterial gene expression by riboswitches. Annu Rev Microbiol 2006;59:487-517. [PMID: 16153177 DOI: 10.1146/annurev.micro.59.030804.121336] [Citation(s) in RCA: 544] [Impact Index Per Article: 28.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
16
Volgraf M, Gorostiza P, Numano R, Kramer RH, Isacoff EY, Trauner D. Allosteric control of an ionotropic glutamate receptor with an optical switch. Nat Chem Biol 2005;2:47-52. [PMID: 16408092 PMCID: PMC1447676 DOI: 10.1038/nchembio756] [Citation(s) in RCA: 479] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2005] [Accepted: 11/16/2005] [Indexed: 11/09/2022]
17
Uversky VN, Oldfield CJ, Dunker AK. Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling. J Mol Recognit 2005;18:343-84. [PMID: 16094605 DOI: 10.1002/jmr.747] [Citation(s) in RCA: 669] [Impact Index Per Article: 33.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
18
Salis H, Kaznessis Y. Numerical simulation of stochastic gene circuits. Comput Chem Eng 2005. [DOI: 10.1016/j.compchemeng.2004.08.017] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
19
Dellaire G, Nisman R, Eskiw CH, Bazett-Jones DP. In situ imaging and isolation of proteins using dsDNA oligonucleotides. Nucleic Acids Res 2004;32:e165. [PMID: 15562000 PMCID: PMC534643 DOI: 10.1093/nar/gnh164] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
20
Grosset AM, Gibney BR, Rabanal F, Moser CC, Dutton PL. Proof of principle in a de novo designed protein maquette: an allosterically regulated, charge-activated conformational switch in a tetra-alpha-helix bundle. Biochemistry 2001;40:5474-87. [PMID: 11331012 DOI: 10.1021/bi002504f] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
21
Luscombe NM, Austin SE, Berman HM, Thornton JM. An overview of the structures of protein-DNA complexes. Genome Biol 2000;1:REVIEWS001. [PMID: 11104519 PMCID: PMC138832 DOI: 10.1186/gb-2000-1-1-reviews001] [Citation(s) in RCA: 439] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]  Open
22
Rine J. On the mechanism of silencing in Escherichia coli. Proc Natl Acad Sci U S A 1999;96:8309-11. [PMID: 10411864 PMCID: PMC33615 DOI: 10.1073/pnas.96.15.8309] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
White A, Ding X, vanderSpek JC, Murphy JR, Ringe D. Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex. Nature 1998;394:502-6. [PMID: 9697776 DOI: 10.1038/28893] [Citation(s) in RCA: 129] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
24
Müller-Hill B. Some repressors of bacterial transcription. Curr Opin Microbiol 1998;1:145-51. [PMID: 10066473 DOI: 10.1016/s1369-5274(98)80004-0] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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