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For: Madison-Antenucci S, Hajduk SL. RNA editing-associated protein 1 is an RNA binding protein with specificity for preedited mRNA. Mol Cell 2001;7:879-86. [PMID: 11336710 DOI: 10.1016/s1097-2765(01)00231-3] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Number Cited by Other Article(s)
1
Aphasizheva I, Alfonzo J, Carnes J, Cestari I, Cruz-Reyes J, Göringer HU, Hajduk S, Lukeš J, Madison-Antenucci S, Maslov DA, McDermott SM, Ochsenreiter T, Read LK, Salavati R, Schnaufer A, Schneider A, Simpson L, Stuart K, Yurchenko V, Zhou ZH, Zíková A, Zhang L, Zimmer S, Aphasizhev R. Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes. Trends Parasitol 2020;36:337-355. [PMID: 32191849 PMCID: PMC7083771 DOI: 10.1016/j.pt.2020.01.006] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 01/19/2020] [Accepted: 01/22/2020] [Indexed: 12/15/2022]
2
Kruse E, Voigt C, Leeder WM, Göringer HU. RNA helicases involved in U-insertion/deletion-type RNA editing. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2013;1829:835-41. [PMID: 23587716 DOI: 10.1016/j.bbagrm.2013.04.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Revised: 04/04/2013] [Accepted: 04/08/2013] [Indexed: 12/20/2022]
3
Göringer HU. 'Gestalt,' composition and function of the Trypanosoma brucei editosome. Annu Rev Microbiol 2013;66:65-82. [PMID: 22994488 DOI: 10.1146/annurev-micro-092611-150150] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
4
RNA Editing in African Trypanosomes: A U-ser’s G-U-ide. RNA METABOLISM IN TRYPANOSOMES 2012. [DOI: 10.1007/978-3-642-28687-2_7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
5
Göringer HU, Katari VS, Böhm C. The structural landscape of native editosomes in African trypanosomes. WILEY INTERDISCIPLINARY REVIEWS. RNA 2011;2:395-407. [PMID: 21957025 DOI: 10.1002/wrna.67] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
6
Ammerman ML, Hashimi H, Novotná L, Cicová Z, McEvoy SM, Lukes J, Read LK. MRB3010 is a core component of the MRB1 complex that facilitates an early step of the kinetoplastid RNA editing process. RNA (NEW YORK, N.Y.) 2011;17:865-77. [PMID: 21451155 PMCID: PMC3078736 DOI: 10.1261/rna.2446311] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2010] [Accepted: 02/17/2011] [Indexed: 05/20/2023]
7
TbPRMT6 is a type I protein arginine methyltransferase that contributes to cytokinesis in Trypanosoma brucei. EUKARYOTIC CELL 2010;9:866-77. [PMID: 20418380 DOI: 10.1128/ec.00018-10] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
8
Guo X, Ernst NL, Carnes J, Stuart KD. The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei. PLoS One 2010;5:e8913. [PMID: 20111718 PMCID: PMC2811742 DOI: 10.1371/journal.pone.0008913] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2009] [Accepted: 12/30/2009] [Indexed: 01/16/2023]  Open
9
Schnaufer A, Wu M, Park YJ, Nakai T, Deng J, Proff R, Hol WGJ, Stuart KD. A protein-protein interaction map of trypanosome ~20S editosomes. J Biol Chem 2009;285:5282-95. [PMID: 20018860 DOI: 10.1074/jbc.m109.059378] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
10
Ernst NL, Panicucci B, Carnes J, Stuart K. Differential functions of two editosome exoUases in Trypanosoma brucei. RNA (NEW YORK, N.Y.) 2009;15:947-957. [PMID: 19318463 PMCID: PMC2673068 DOI: 10.1261/rna.1373009] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2008] [Accepted: 01/22/2009] [Indexed: 05/27/2023]
11
Fisk JC, Sayegh J, Zurita-Lopez C, Menon S, Presnyak V, Clarke SG, Read LK. A type III protein arginine methyltransferase from the protozoan parasite Trypanosoma brucei. J Biol Chem 2009;284:11590-600. [PMID: 19254949 DOI: 10.1074/jbc.m807279200] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
12
Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo. EMBO J 2009;28:766-78. [PMID: 19197238 DOI: 10.1038/emboj.2009.19] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2008] [Accepted: 01/12/2009] [Indexed: 01/15/2023]  Open
13
Zíková A, Kopečná J, Schumacher MA, Stuart K, Trantírek L, Lukeš J. Structure and function of the native and recombinant mitochondrial MRP1/MRP2 complex from Trypanosoma brucei. Int J Parasitol 2008;38:901-12. [PMID: 18295767 PMCID: PMC2492832 DOI: 10.1016/j.ijpara.2007.12.009] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2007] [Revised: 12/19/2007] [Accepted: 12/31/2007] [Indexed: 10/22/2022]
14
Fisk JC, Ammerman ML, Presnyak V, Read LK. TbRGG2, an essential RNA editing accessory factor in two Trypanosoma brucei life cycle stages. J Biol Chem 2008;283:23016-25. [PMID: 18583347 DOI: 10.1074/jbc.m801021200] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
15
Working Together: the RNA Editing Machinery in Trypanosoma brucei. ACTA ACUST UNITED AC 2008. [DOI: 10.1007/978-3-540-73787-2_7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2023]
16
Göringer HU, Brecht M, Böhm C, Kruse E. RNA Editing Accessory Factors — the Example of mHel61p. NUCLEIC ACIDS AND MOLECULAR BIOLOGY 2008. [DOI: 10.1007/978-3-540-73787-2_8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/11/2023]
17
Cruz-Reyes J. RNA-protein interactions in assembled editing complexes in trypanosomes. Methods Enzymol 2007;424:107-25. [PMID: 17662838 DOI: 10.1016/s0076-6879(07)24005-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2023]
18
Hans J, Hajduk SL, Madison-Antenucci S. RNA-editing-associated protein 1 null mutant reveals link to mitochondrial RNA stability. RNA (NEW YORK, N.Y.) 2007;13:881-9. [PMID: 17416633 PMCID: PMC1869032 DOI: 10.1261/rna.486107] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
19
Cifuentes-Rojas C, Pavia P, Hernandez A, Osterwisch D, Puerta C, Cruz-Reyes J. Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion. J Biol Chem 2007;282:4265-4276. [PMID: 17158098 DOI: 10.1074/jbc.m605554200] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
20
Law JA, O'Hearn S, Sollner-Webb B. In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages. Mol Cell Biol 2006;27:777-87. [PMID: 17101787 PMCID: PMC1800803 DOI: 10.1128/mcb.01460-06] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
21
Goulah CC, Pelletier M, Read LK. Arginine methylation regulates mitochondrial gene expression in Trypanosoma brucei through multiple effector proteins. RNA (NEW YORK, N.Y.) 2006;12:1545-55. [PMID: 16775306 PMCID: PMC1524885 DOI: 10.1261/rna.90106] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
22
Panigrahi AK, Ernst NL, Domingo GJ, Fleck M, Salavati R, Stuart KD. Compositionally and functionally distinct editosomes in Trypanosoma brucei. RNA (NEW YORK, N.Y.) 2006;12:1038-49. [PMID: 16611942 PMCID: PMC1464856 DOI: 10.1261/rna.45506] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
23
Salavati R, Ernst NL, O'Rear J, Gilliam T, Tarun S, Stuart K. KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei. RNA (NEW YORK, N.Y.) 2006;12:819-31. [PMID: 16601201 PMCID: PMC1440894 DOI: 10.1261/rna.2244106] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2005] [Accepted: 02/08/2006] [Indexed: 05/08/2023]
24
Deng J, Ernst NL, Turley S, Stuart KD, Hol WGJ. Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei. EMBO J 2005;24:4007-17. [PMID: 16281058 PMCID: PMC1356302 DOI: 10.1038/sj.emboj.7600861] [Citation(s) in RCA: 69] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2005] [Accepted: 10/10/2005] [Indexed: 01/07/2023]  Open
25
Lukes J, Hashimi H, Zíková A. Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates. Curr Genet 2005;48:277-99. [PMID: 16215758 DOI: 10.1007/s00294-005-0027-0] [Citation(s) in RCA: 145] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2005] [Revised: 09/03/2005] [Accepted: 09/07/2005] [Indexed: 10/25/2022]
26
Brecht M, Niemann M, Schlüter E, Müller UF, Stuart K, Göringer HU. TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity. Mol Cell 2005;17:621-30. [PMID: 15749013 DOI: 10.1016/j.molcel.2005.01.018] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2004] [Revised: 12/03/2004] [Accepted: 01/21/2005] [Indexed: 01/06/2023]
27
Deng J, Schnaufer A, Salavati R, Stuart KD, Hol WGJ. High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1. J Mol Biol 2004;343:601-13. [PMID: 15465048 DOI: 10.1016/j.jmb.2004.08.041] [Citation(s) in RCA: 72] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2004] [Revised: 08/11/2004] [Accepted: 08/12/2004] [Indexed: 11/23/2022]
28
Vondrusková E, van den Burg J, Zíková A, Ernst NL, Stuart K, Benne R, Lukes J. RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei. J Biol Chem 2004;280:2429-38. [PMID: 15504736 DOI: 10.1074/jbc.m405933200] [Citation(s) in RCA: 102] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
29
Simpson L, Aphasizhev R, Gao G, Kang X. Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing. RNA (NEW YORK, N.Y.) 2004;10:159-70. [PMID: 14730014 PMCID: PMC1370527 DOI: 10.1261/rna.5170704] [Citation(s) in RCA: 108] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
30
Schnaufer A, Ernst NL, Palazzo SS, O'Rear J, Salavati R, Stuart K. Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex. Mol Cell 2003;12:307-19. [PMID: 14536071 DOI: 10.1016/s1097-2765(03)00286-7] [Citation(s) in RCA: 114] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
31
Panigrahi AK, Allen TE, Stuart K, Haynes PA, Gygi SP. Mass spectrometric analysis of the editosome and other multiprotein complexes in Trypanosoma brucei. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2003;14:728-735. [PMID: 12837594 DOI: 10.1016/s1044-0305(03)00126-0] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
32
Panigrahi AK, Schnaufer A, Ernst NL, Wang B, Carmean N, Salavati R, Stuart K. Identification of novel components of Trypanosoma brucei editosomes. RNA (NEW YORK, N.Y.) 2003;9:484-92. [PMID: 12649499 PMCID: PMC1370414 DOI: 10.1261/rna.2194603] [Citation(s) in RCA: 106] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2002] [Accepted: 01/09/2003] [Indexed: 05/19/2023]
33
Pelletier M, Read LK. RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei. RNA (NEW YORK, N.Y.) 2003;9:457-68. [PMID: 12649497 PMCID: PMC1370412 DOI: 10.1261/rna.2160803] [Citation(s) in RCA: 77] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2002] [Accepted: 12/27/2002] [Indexed: 05/20/2023]
34
Simpson L, Sbicego S, Aphasizhev R. Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business. RNA (NEW YORK, N.Y.) 2003;9:265-76. [PMID: 12591999 PMCID: PMC1370392 DOI: 10.1261/rna.2178403] [Citation(s) in RCA: 117] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
35
Stuart K, Panigrahi AK. RNA editing: complexity and complications. Mol Microbiol 2002;45:591-6. [PMID: 12139607 DOI: 10.1046/j.1365-2958.2002.03028.x] [Citation(s) in RCA: 78] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
36
Hall KB. RNA-protein interactions. Curr Opin Struct Biol 2002;12:283-8. [PMID: 12127445 DOI: 10.1016/s0959-440x(02)00323-8] [Citation(s) in RCA: 64] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
37
Huang CE, O'Hearn SF, Sollner-Webb B. Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein. Mol Cell Biol 2002;22:3194-203. [PMID: 11940676 PMCID: PMC133760 DOI: 10.1128/mcb.22.9.3194-3203.2002] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2001] [Revised: 11/20/2001] [Accepted: 01/07/2002] [Indexed: 11/20/2022]  Open
38
Madison-Antenucci S, Grams J, Hajduk SL. Editing machines: the complexities of trypanosome RNA editing. Cell 2002;108:435-8. [PMID: 11909515 DOI: 10.1016/s0092-8674(02)00653-0] [Citation(s) in RCA: 93] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
39
Müller UF, Göringer HU. Mechanism of the gBP21-mediated RNA/RNA annealing reaction: matchmaking and charge reduction. Nucleic Acids Res 2002;30:447-55. [PMID: 11788706 PMCID: PMC99830 DOI: 10.1093/nar/30.2.447] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2001] [Revised: 11/16/2001] [Accepted: 11/16/2001] [Indexed: 01/17/2023]  Open
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