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For: Zhu P, Gu H, Jiao Y, Huang D, Chen M. Computational identification of protein-protein interactions in rice based on the predicted rice interactome network. Genomics Proteomics Bioinformatics 2012;9:128-37. [PMID: 22196356 PMCID: PMC5054448 DOI: 10.1016/s1672-0229(11)60016-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2011] [Accepted: 07/04/2011] [Indexed: 01/29/2023]
Number Cited by Other Article(s)
1
Yang G, Liu Y, Gong Z, Chen S, Wang J, Song L, Liu S. Genome wide identification of LcC2DPs gene family in Lotus corniculatus provides insights into regulatory network in response to abiotic stresses. Sci Rep 2025;15:13380. [PMID: 40251318 PMCID: PMC12008259 DOI: 10.1038/s41598-025-97896-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Accepted: 04/08/2025] [Indexed: 04/20/2025]  Open
2
Ren C, Kui L, Xu J, Tong F, Wang X, Ma J, Tian X, Wang G, Liu F, Li S, Ji X. Single-Cell Insights Into Cellular Response in Abdominal Aortic Occlusion-Induced Hippocampal Injury. CNS Neurosci Ther 2025;31:e70154. [PMID: 39834143 PMCID: PMC11746957 DOI: 10.1111/cns.70154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Revised: 10/21/2024] [Accepted: 11/17/2024] [Indexed: 01/22/2025]  Open
3
Gong F, Cao D, Sun X, Li Z, Qu C, Fan Y, Cao Z, Zhao K, Zhao K, Qiu D, Li Z, Ren R, Ma X, Zhang X, Yin D. Homologous mapping yielded a comprehensive predicted protein-protein interaction network for peanut (Arachis hypogaea L.). BMC PLANT BIOLOGY 2024;24:873. [PMID: 39304811 DOI: 10.1186/s12870-024-05580-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Accepted: 09/09/2024] [Indexed: 09/22/2024]
4
Kumari M, Kapoor R, Devanna BN, Varshney S, Kamboj R, Rai AK, Sharma TR. iTRAQ based proteomic analysis of rice lines having single or stacked blast resistance genes: Pi54/Pi54rh during incompatible interaction with Magnaporthe oryzae. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2023;29:871-887. [PMID: 37520805 PMCID: PMC10382468 DOI: 10.1007/s12298-023-01327-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 05/12/2023] [Accepted: 06/08/2023] [Indexed: 08/01/2023]
5
Wang C, Hao X, Liu X, Su Y, Pan Y, Zong C, Wang W, Xing G, He J, Gai J. An Improved Genome-Wide Association Procedure Explores Gene-Allele Constitutions and Evolutionary Drives of Growth Period Traits in the Global Soybean Germplasm Population. Int J Mol Sci 2023;24:ijms24119570. [PMID: 37298521 DOI: 10.3390/ijms24119570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Revised: 05/26/2023] [Accepted: 05/29/2023] [Indexed: 06/12/2023]  Open
6
Karan B, Mahapatra S, Sahu SS, Pandey DM, Chakravarty S. Computational models for prediction of protein-protein interaction in rice and Magnaporthe grisea. FRONTIERS IN PLANT SCIENCE 2023;13:1046209. [PMID: 36816487 PMCID: PMC9929577 DOI: 10.3389/fpls.2022.1046209] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Accepted: 12/28/2022] [Indexed: 06/18/2023]
7
Li LP, Zhang B, Cheng L. CPIELA: Computational Prediction of Plant Protein–Protein Interactions by Ensemble Learning Approach From Protein Sequences and Evolutionary Information. Front Genet 2022;13:857839. [PMID: 35360876 PMCID: PMC8963800 DOI: 10.3389/fgene.2022.857839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 02/10/2022] [Indexed: 11/22/2022]  Open
8
OUP accepted manuscript. Brief Funct Genomics 2022;21:243-269. [DOI: 10.1093/bfgp/elac007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 03/17/2022] [Accepted: 03/18/2022] [Indexed: 11/14/2022]  Open
9
Singh G, Singh V, Singh V. Construction and analysis of an interologous protein-protein interaction network of Camellia sinensis leaf (TeaLIPIN) from RNA-Seq data sets. PLANT CELL REPORTS 2019;38:1249-1262. [PMID: 31197449 DOI: 10.1007/s00299-019-02440-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Accepted: 06/04/2019] [Indexed: 06/09/2023]
10
Di Silvestre D, Bergamaschi A, Bellini E, Mauri P. Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World. Proteomes 2018;6:proteomes6020027. [PMID: 29865292 PMCID: PMC6027444 DOI: 10.3390/proteomes6020027] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Revised: 05/30/2018] [Accepted: 06/01/2018] [Indexed: 12/26/2022]  Open
11
Review: Omics and Strategic Yield Improvement in Oil Crops. J AM OIL CHEM SOC 2017. [DOI: 10.1007/s11746-017-3033-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
12
Ding YD, Chang JW, Guo J, Chen D, Li S, Xu Q, Deng XX, Cheng YJ, Chen LL. Prediction and functional analysis of the sweet orange protein-protein interaction network. BMC PLANT BIOLOGY 2014;14:213. [PMID: 25091279 PMCID: PMC4236729 DOI: 10.1186/s12870-014-0213-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2013] [Accepted: 07/24/2014] [Indexed: 05/04/2023]
13
Windram O, Penfold CA, Denby KJ. Network modeling to understand plant immunity. ANNUAL REVIEW OF PHYTOPATHOLOGY 2014;52:93-111. [PMID: 24821185 DOI: 10.1146/annurev-phyto-102313-050103] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
14
Braun P, Aubourg S, Van Leene J, De Jaeger G, Lurin C. Plant protein interactomes. ANNUAL REVIEW OF PLANT BIOLOGY 2013;64:161-87. [PMID: 23330791 DOI: 10.1146/annurev-arplant-050312-120140] [Citation(s) in RCA: 74] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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