Direct ultraviolet spectrophotometric determination of total sulfide and iodide in natural waters

Ratiometric Sensing of Azithromycin and Sulfide Using Dual Emissive Carbon Dots: A Turn On-Off-On Approach

A novel ratiometric fluorescence probe was developed for the determination of azithromycin (AZM) and sulfide ions based on the differential modulation of red emissive carbon dots (R-N@CDs) and blue emissive carbon dots (B-NS@CDs). The addition of sulfide anion selectively quenched the red emission of R-N@CDs while the blue emission of B-NS@CDs unaffected. Upon subsequent introduction of AZM to this R-N@CDs@sulfide system, the quenched red fluorescence was restored. Comprehensive characterization of the CDs was performed using UV-Vis, fluorescence, FTIR spectroscopy, XPS, and TEM. The proposed method exhibited excellent sensitivity and selectivity, with limits of detection of 0.33 µM for AZM and 0.21 µM for sulfide. Notably, this approach enabled direct detection of sulfide without requiring prior modulation of the CDs with metal ions, as is common in other reported methods. The ratiometric probe was successfully applied for the determination of AZM in biological fluids and sulfide in environmental water samples with high selectivity. This work presents the first fluorometric method for the detection of AZM in biological fluids.

Synthetic microbial consortia to enhance the biodegradation of compost odor by biotrickling filter

Composting generates odorous gases, including ammonia (NH3), hydrogen sulfide (H2S), and volatile organic compounds (VOCs). The Biological Trickling Filter (BTF) is effective for odor treatment, but it may have limitations with hydrophobic VOCs. In this study, a strain of Bacillus subtilis with ammonia-reducing ability, a strain of Bacillus cereus with desulfurization ability and a strain of Schizophyllum commune with the ability to degrade dimethyl disulfide were isolated and screened. The three strains were combined to create synthetic microbial consortia for enhancing odor treatment in the BTF. Compared to the activated sludge control, the BTF with synthetic microbial consortia removed 92.43% ammonia, 92.75% hydrogen sulfide. Furthermore, it demonstrated a significant improvement in the removal rates of p-methyl mercaptan, methyl sulfide, and dimethyl disulfide. High-throughput sequencing was conducted on the fillers of the synthetic microbial consortia-inoculated BTF to analyze the microbial community composition.

Advances and Opportunities in H2S Measurement in Chemical Biology

Hydrogen sulfide (H2S) is an important biological mediator across all kingdoms of life and plays intertwined roles in various disciplines, ranging from geochemical cycles to industrial processes. A common need across these broad disciplines is the ability to detect and measure H2S in complex sample environments. This Perspective focuses on key advances and opportunities for H2S detection and quantification that are relevant to chemical biology. Specifically, we focus on methods for H2S detection and quantification most commonly used in biological samples, including activity-based H2S probes, the methylene blue assay, the monobromobimane assay, and H2S-sensitive electrode measurements. Our goal is to help simplify what at first may seem to be an overwhelming array of detection and measurement choices, to articulate the strengths and limitations of individual techniques, and to highlight key unmet needs and opportunities in the field.

Critical evaluation of the interaction between fluorescent dissolved organic matter and Pb(II) under variable environmental conditions

Dissolved organic matter (DOM) can strongly influence the behavior and risk of metal pollutants in aquatic ecosystems. However, a comprehensive study on the effects of DOM level and environmental factors on the binding of DOM with Pb(II) is lacking. This study examined the DOM-Pb(II) interaction in the river water under variable DOM level, pH, and major ions, using fluorescence excitation-emission matrices-parallel factor analysis (EEMs-PARAFAC). Four humic-like and one protein-like component were identified, and the abundant humic-like components showed higher Pb(II)-binding fractions (f) than the protein-like component. The f of PARAFAC components decreased while the conditional stability constants (logK_M) increased for the diluted DOM, indicating the influence of DOM level on its metal binding. The DOM-Pb(II) interaction was sensitive to changes in pH, with generally higher f and lower logK_M at the alkaline condition due to changes in the DOM conformation. The addition of major ions significantly decreased the fluorescence quenching by Pb(II), due to competitive effects and potential DOM conformation changes at elevated ions. Overall, our results show that the DOM-Pb(II) complexation is highly dependent on both the DOM properties and environmental factors, which have implications for optimizing the experimental conditions and for comparing the results in different environments.

Inner filter effect-based upconversion fluorescence sensing of sulfide ions

Upconversion nanocrystals (UCNCs) have emerged as a new type of fluorescent probe for sensing applications. Herein, we designed a 980 nm excited upconversion luminescence system, composed of core-shell-structured NaYF₄ : Yb,Er@NaYF₄ : Yb nanocrystals (csUCNCs) and the triethylenetetramine-Cu complex (complex-I), for quantitative detection of sulfide ions. Taking advantage of the specific recognition of complex-I toward S^2-, the as-formed compound (complex-II) exhibits excellent spectral overlap not only in the range of fluorescence emissions of UCNCs but also in the excitation wavelength for UCNCs; fluorescence quenching of UCNCs occurs where the complex-II acts as the energy acceptor. Due to the electrostatic repulsion between positively charged ligand-free csUCNCs and complex-I, the fluorescence quenching is based on the primary and secondary inner filter effect rather than the fluorescence resonance energy transfer process. The detection limit of S^2- for the upconversion-based system is calculated to be 2.7 μM, exhibiting higher detection sensitivity over the single complex-I compound measured by the spectrophotometric method. Moreover, no significant variation in upconversion luminescence is observed upon the addition of other interfering ions, showing the excellent selectivity of this nanoprobe toward S^2-.

UV Transmission in Natural Waters on Prebiotic Earth

Ultraviolet (UV) light plays a key role in surficial theories of the origin of life, and numerous studies have focused on constraining the atmospheric transmission of UV radiation on early Earth. However, the UV transmission of the natural waters in which origins-of-life chemistry (prebiotic chemistry) is postulated to have occurred is poorly constrained. In this work, we combine laboratory and literature-derived absorption spectra of potential aqueous-phase prebiotic UV absorbers with literature estimates of their concentrations on early Earth to constrain the prebiotic UV environment in marine and terrestrial natural waters, and we consider the implications for prebiotic chemistry. We find that prebiotic freshwaters were largely transparent in the UV, contrary to assumptions in some models of prebiotic chemistry. Some waters, such as high-salinity waters like carbonate lakes, may be deficient in shortwave (≤220 nm) UV flux. More dramatically, ferrous waters can be strongly UV-shielded, particularly if the Fe²⁺ forms highly UV-absorbent species such as FeCN64-. Such waters may be compelling venues for UV-averse origin-of-life scenarios but are unfavorable for some UV-dependent prebiotic chemistries. UV light can trigger photochemistry even if attenuated through photochemical transformations of the absorber (e.g., eaq- production from halide irradiation), which may have both constructive and destructive effects for prebiotic syntheses. Prebiotic chemistries that invoke waters that contain such absorbers must self-consistently account for the chemical effects of these transformations. The speciation and abundance of Fe²⁺ in natural waters on early Earth is a major uncertainty and should be prioritized for further investigation, as it played a major role in UV transmission in prebiotic natural waters.

Two simple but effective turn-on benzothiazole-based fluorescent probes for detecting hydrogen sulfide in real water samples and HeLa cells

Two simple turn-on fluorescent probes, containing a benzothiazole and the 2,4-dinitrobenzenesulfonyl group, were designed for detecting H₂S. Two probes exhibited good selectivity and high sensitivity, which were applied to detect the H₂S in real water samples. Probe P2 with a positive charge had better solubility than probe P1 in water; therefore, probe P2 was successfully applied to detect both the endogenous and exogenous H₂S in lysosomes of living HeLa cells.

The pathway of sulfide oxidation to octasulfur globules in the cytoplasm of aerobic bacteria

Sulfur-oxidizing bacteria can oxidize hydrogen sulfide (H₂S) to produce sulfur globules. Although the process is common, the pathway is unclear. In recombinant Escherichia coli and wild-type Corynebacterium vitaeruminis DSM20294 with SQR but no enzymes to oxidize zero valence sulfur, SQR oxidized H₂S into short-chain inorganic polysulfide (H₂S_n, n≥2) and organic polysulfide (RS_nH, n≥2), which reacted with each other to form long-chain GS_nH (n≥2) and H₂S_n before producing octasulfur (S₈), the main component of elemental sulfur. GS_nH also reacted with GSH to form GSnG (n≥2) and H₂S; H₂S was again oxidized by SQR. After GSH was depleted, SQR simply oxidized H₂S to H₂S_n, which spontaneously generated S₈. S₈ aggregated into sulfur globules in the cytoplasm. The results highlight the process of sulfide oxidation to S₈ globules in the bacterial cytoplasm and demonstrate the potential of using heterotrophic bacteria with SQR to convert toxic H₂S into relatively benign S₈ globules. IMPORTANCE Our results support a process of H₂S oxidation to produce octasulfur globules via SQR catalysis and spontaneous reactions in the bacterial cytoplasm. Since the process is an important event in geochemical cycling, a better understanding facilitates further studies and provides theoretical support for using heterotrophic bacteria with SQR to oxidize toxic H₂S into sulfur globules for recovery.

L-Cysteine Synthase Enhanced Sulfide Biotransformation in Subtropical Marine Mangrove Sediments as Revealed by Metagenomics Analysis

High sulfides concentrations can be poisonous to environment because of anthropogenic waste production or natural occurrences. How to elucidate the biological transformation mechanisms of sulfide pollutants in the subtropical marine mangrove ecosystem has gained increased interest. Thus, in the present study, the sulfide biotransformation in subtropical mangroves ecosystem was accurately evaluated using metagenomic sequencing and quantitative polymerase chain reaction analysis. Most abundant genes were related to the organic sulfur transformation. Furthermore, an ecological model of sulfide conversion was constructed. Total phosphorus was the dominant environmental factor that drove the sulfur cycle and microbial communities. We compared mangrove and non-mangrove soils and found that the former enhanced metabolism that was related to sulfate reduction when compared to the latter. Total organic carbon, total organic nitrogen, iron, and available sulfur were the key environmental factors that effectively influenced the dissimilatory sulfate reduction. The taxonomic assignment of dissimilatory sulfate-reducing genes revealed that Desulfobacterales and Chromatiales were mainly responsible for sulfate reduction. Chromatiales were most sensitive to environmental factors. The high abundance of cysE and cysK could contribute to the coping of the microbial community with the toxic sulfide produced by Desulfobacterales. Collectively, these findings provided a theoretical basis for the mechanism of the sulfur cycle in subtropical mangrove ecosystems.

L-Cysteine Synthase Enhanced Sulfide Biotransformation in Subtropical Marine Mangrove Sediments as Revealed by Metagenomics Analysis

High sulfides concentrations can be poisonous to environment because of anthropogenic waste production or natural occurrences. How to elucidate the biological transformation mechanisms of sulfide pollutants in the subtropical marine mangrove ecosystem has gained increased interest. Thus, in the present study, the sulfide biotransformation in subtropical mangroves ecosystem was accurately evaluated using metagenomic sequencing and quantitative polymerase chain reaction analysis. Most abundant genes were related to the organic sulfur transformation. Furthermore, an ecological model of sulfide conversion was constructed. Total phosphorus was the dominant environmental factor that drove the sulfur cycle and microbial communities. We compared mangrove and non-mangrove soils and found that the former enhanced metabolism that was related to sulfate reduction when compared to the latter. Total organic carbon, total organic nitrogen, iron, and available sulfur were the key environmental factors that effectively influenced the dissimilatory sulfate reduction. The taxonomic assignment of dissimilatory sulfate-reducing genes revealed that Desulfobacterales and Chromatiales were mainly responsible for sulfate reduction. Chromatiales were most sensitive to environmental factors. The high abundance of cysE and cysK could contribute to the coping of the microbial community with the toxic sulfide produced by Desulfobacterales. Collectively, these findings provided a theoretical basis for the mechanism of the sulfur cycle in subtropical mangrove ecosystems.

Comparison of Online Sensors for Liquid Phase Hydrogen Sulphide Monitoring in Sewer Systems

Hydrogen sulfide (H2S) related to wastewater in sewer systems is known for causing significant problems of corrosion and odor nuisance. Sewer systems severely affected by H2S typically rely on online H2S gas sensors for monitoring and control. However, these H2S gas sensors only provide information about the H2S emission potential at the point being monitored, which is sometimes inadequate to design control measures. In this study, a comparison of three market-ready online sensors capable of liquid-phase H2S detection in sewer systems was assessed and compared. Two of the three sensors are based on UV/Vis spectrophotometry, while the other adapted the design and principles of a Clark-type electrochemical microsensor. The H2S measurements of the sensors were statistically compared to a standard laboratory method at first. Following that, the performance of the online sensors was evaluated under realistic sewer conditions using the Berlin Water Company (BWB) research sewer pilot plant. Test applications representing scenarios of typical H2S concentrations found in sulfide-affected sewers and during control measures were simulated. The UV/Vis spectrometers showed that the performance of the sensors was highly dependent on the calibration type and measurements used for deriving the calibration function. The electrochemical sensor showed high sensitivity by responding to alternating anaerobic/anoxic conditions simulated during nitrate dosing. All sensors were prone to measurement disturbances due to high amounts of sanitary solids in wastewater at the study site and required continuous maintenance for reliable measurements. Finally, a summary of the key attributes and limitations of the sensors compared for liquid phase H2S detection is outlined.

Biosynthesis, Quantification and Genetic Diseases of the Smallest Signaling Thiol Metabolite: Hydrogen Sulfide

Hydrogen sulfide (H₂S) is a gasotransmitter and the smallest signaling thiol metabolite with important roles in human health. The turnover of H₂S in humans is mainly governed by enzymes of sulfur amino acid metabolism and also by the microbiome. As is the case with other small signaling molecules, disease-promoting effects of H₂S largely depend on its concentration and compartmentalization. Genetic defects that impair the biogenesis and catabolism of H₂S have been described; however, a gap in knowledge remains concerning physiological steady-state concentrations of H₂S and their direct clinical implications. The small size and considerable reactivity of H₂S renders its quantification in biological samples an experimental challenge. A compilation of methods currently employed to quantify H₂S in biological specimens is provided in this review. Substantial discrepancy exists in the concentrations of H₂S determined by different techniques. Available methodologies permit end-point measurement of H₂S concentration, yet no definitive protocol exists for the continuous, real-time measurement of H₂S produced by its enzymatic sources. We present a summary of available animal models, monogenic diseases that impair H₂S metabolism in humans including structure-function relationships of pathogenic mutations, and discuss possible approaches to overcome current limitations of study.

Ultraviolet Spectroscopic Detection of Nitrate and Nitrite in Seawater Simultaneously Based on Partial Least Squares

A direct, reagent-free, ultraviolet spectroscopic method for the simultaneous determination of nitrate (NO₃^-), nitrite (NO₂^-), and salinity in seawater is presented. The method is based on measuring the absorption spectra of the raw seawater range of 200-300 nm, combined with partial least squares (PLS) regression for resolving the spectral overlapping of NO₃^-, NO₂^-, and sea salt (or salinity). The interference from chromophoric dissolved organic matter (CDOM) UV absorbance was reduced according to its exponential relationship between 275 and 295 nm. The results of the cross-validation of calibration and the prediction sets were used to select the number of factors (4 for NO₃^-, NO₂^-, and salinity) and to optimize the wavelength range (215-240 nm) with a 1 nm wavelength interval. The linear relationship between the predicted and the actual values of NO₃^-, NO₂^-, salinity, and the recovery of spiked water samples suggest that the proposed PLS model can be a valuable alternative method to the wet chemical methods. Due to its simplicity and fast response, the proposed PLS model can be used as an algorithm for building nitrate and nitrite sensors. The comparison study of PLS and a classic least squares (CLS) model shows both PLS and CLS can give satisfactory results for predicting NO₃^- and salinity. However, for NO₂^- in some samples, PLS is superior to CLS, which may be due to the interference from unknown substances not included in the CLS algorithm. The proposed method was applied to the analysis of NO₃^-, NO₂^-, and salinity in the Changjiang (Yangtze River) estuary water samples and the results are comparable with that determined by the colorimetric Griess assay.

NO, CO and H2S based pharmaceuticals in the mission of vision (eye health): a comprehensive review

A set of well defined signaling molecules responsible for normal functioning of human physiology including nitric oxide along with carbon monoxide and hydrogen sulphide are referred as “gasotransmitters”. Due to their involvement in almost every system of a human body, the care of highly sensitive organs using these molecules as drugs represents highly fascinating area of research. In connection with these interesting aspects, the applied aspects of these gaseous molecules in maintaining healthy eye and vision have been targeted in this review. Several examples of eye-droppers including NORMs like latanoprost and nipradiol, CORMs like CORM-3 and CORM-A1, and Hydrogen sulfide releasing system like GYY4137 have been discussed in this context. Therefore the relation of these trio-gasotransmitters with the ophthalmic homeostasis on one hand, and de-infecting role on the other hand has been mainly highlighted. Some molecular systems capable of mimicking gasotransmitter action have also been introduced in connection with the titled theme.

An Improved Algorithm for Measuring Nitrate Concentrations in Seawater Based on Deep-Ultraviolet Spectrophotometry: A Case Study of the Aoshan Bay Seawater and Western Pacific Seawater

Nowadays, it is still a challenge for commercial nitrate sensors to meet the requirement of high accuracy in a complex water. Based on deep-ultraviolet spectral analysis and a regression algorithm, a different measuring method for obtaining the concentration of nitrate in seawater is proposed in this paper. The system consists of a deuterium lamp, an optical fiber splitter module, a reflection probe, temperature and salinity sensors, and a deep-ultraviolet spectrometer. The regression model based on weighted average kernel partial least squares (WA-KPLS) algorithm together with corrections for temperature and salinity (TSC) is established. After that, the seawater samples from Western Pacific and Aoshan Bay in Qingdao, China with the addition of various nitrate concentrations are studied to verify the reliability and accuracy of the method. The results show that the TSC-WA-KPLS algorithm shows the best results when compared against the multiple linear regression (MLR) and ISUS (in situ ultraviolet spectrophotometer) algorithms in the temperatures range of 4–25 °C, with RMSEP of 0.67 µmol/L for Aoshan Bay seawater and 1.08 µmol/L for Western Pacific seawater. The method proposed in this paper is suitable for measuring the nitrate concentration in seawater with higher accuracy, which could find application in the development of in-situ and real-time nitrate sensors.

Multi-parameter calibration of a UV/Vis spectrometer for online monitoring of sewer systems

UV/Vis spectrometers are powerful tools for online monitoring of wastewater constituents and processes. However, most studies only focus on typical parameters such as chemical oxygen demand (COD) and total suspended solids. This work presents a multi-parameter approach for calibration of a UV/Vis spectrometer for online monitoring of sewer systems. Parameters studied include soluble and total COD, nitrate, ammonium, sulphate and orthophosphate, as well as total dissolved sulphide, bisulphide and hydrogen sulphide, because they are one of the main causes for odour and corrosion in sewer systems. Two calibration methods are compared: multiple linear regression included in the manufacturer's software, and partial least square (PLS) computed using the pls package of the R library. Performance of the methods is evaluated for calibration and validation data sets employing four different criteria: relative root mean square error (RMSE_rel), RMSE-observations standard deviation ratio, Nash-Sutcliffe efficiency and percentage bias. A method-parameter dependency was revealed during the calibration phase but, when predicting new data, the PLS method showed higher robustness for almost all parameters. Both methods were able to predict concentration trends associated with sewer processes, some of which are strongly correlated to the sulphide species.

One minute synthesis of green fluorescent copper nanocluster: The preparation of smartphone aided paper-based kit for on-site monitoring of nanomolar level mercury and sulfide ions in environmental samples

We wish to report, a minute synthesis of green fluorescent copper nanocluster by simple sonication. 1-Thio-β-d-glucose was used as a capping ligand to synthesis copper nanocluster (TG-CuNCs). The TG-CuNCs exhibit the emission maximum at 430 nm. The synthesized TG-CuNCs was well characterized by UV-vis, fluorescent, XRD, HR-TEM and FT-IR techniques. After the addition of Hg²⁺ or S^2- into TG-CuNCs, the fluorescence was quenched. Based on the quenching of fluorescence, we have calculated the detection limit 1.7 nM and 1.02 nM for Hg²⁺ and S^2-, respectively. Finally, we have applied TG-CuNCs for the detection of Hg²⁺ and S^2- in tap, river, pond water. Importantly, the smartphone aided paper-based kit was developed for on-site monitoring of Hg²⁺ and S^2- ions. To the best of our knowledge, this is the first report for the one-minute synthesis of TG-CuNCs and the preparation of smartphone aided paper-based kit for on-site monitoring of Hg²⁺ and S^2- ions. Further, it is anticipated that this synthesis of TG-CuNCs and smartphone aided paper-based kit for Hg²⁺ and S^2- will be useful materials in the filled with the biosensor, material science and nanotechnology.

A revised classification system describing the ecological quality status of organically enriched marine sediments based on total dissolved sulfides

A field study is presented that provides an alternative method and system for classifying the ecological quality status (EQS) of organically enriched marine sediments based on total free sulfide concentrations (S^2-). Sediments collected adjacent to coastal aquaculture activities across a broad biogeographic range were analysed using three S^2- methods. S^2- is a product of organic matter mineralization and is a major cause of benthic community impacts from excess organic enrichment. The results confirm that the ion-selective electrode protocol that is widely used in monitoring programs to classify benthic impacts provides unreliable data and site classifications. An EQS classification system is presented that employs S^2- data measured rapidly and simply in the field by direct ultraviolet spectrophotometry. Interrelations between S^2- concentrations and several benthic macrofauna community health metrics were employed to develop the EQS system. These relationships were consistent regardless of organic matter source, geographic region or sediment grain size.

Observing the Global Ocean with Biogeochemical-Argo

Biogeochemical-Argo (BGC-Argo) is a network of profiling floats carrying sensors that enable observation of as many as six essential biogeochemical and bio-optical variables: oxygen, nitrate, pH, chlorophyll a, suspended particles, and downwelling irradiance. This sensor network represents today's most promising strategy for collecting temporally and vertically resolved observations of biogeochemical properties throughout the ocean. All data are freely available within 24 hours of transmission. These data fill large gaps in ocean-observing systems and support three ambitions: gaining a better understanding of biogeochemical processes (e.g., the biological carbon pump and air-sea CO₂ exchanges) and evaluating ongoing changes resulting from increasing anthropogenic pressure (e.g., acidification and deoxygenation); managing the ocean (e.g., improving the global carbon budget and developing sustainable fisheries); and carrying out exploration for potential discoveries. The BGC-Argo network has already delivered extensive high-quality global data sets that have resulted in unique scientific outcomes from regional to global scales. With the proposed expansion of BGC-Argo in the near future, this network has the potential to become a pivotal observation system that links satellite and ship-based observations in a transformative manner.

Two donor–acceptor (D–A) type Zn(ii) complexes as fluorescent probes for highly selective detection of iodide

Two noval donor-acceptor (D–A) type Zn(ii) complexes ([Zn₂(L¹)₂(MeCN)(MeOH)]·(MeCN) (1) and [ZnL²(H₂O)] (2)) were obtained and selectively detected iodide as fluorescent probes.

Gum acacia-based silver nanoparticles as a highly selective and sensitive dual nanosensor for Hg(ii) and fluorescence turn-off sensor for S2− and malachite green detection

A facile and green method was adopted to synthesize highly selective gum acacia-mediated silver nanoparticles as dual sensor (fluorescence turn-on and colorimetric) for Hg(ii) and fluorescence turn-off sensor for S²⁻ and malachite green. The mechanism proposed for a dual response towards Hg(ii) is the redox reaction between Ag(0) and Hg(ii), resulting in the formation of Ag(i) and Hg(0) and electron transfer from gum acacia to Ag(i), which further leads to the formation of an Ag@Hg nanoalloy. The enhanced fluorescence signal was quenched selectively by S²⁻ owing to the formation of Ag₂S and HgS. The reported nanosensor was found to be useful for sensing malachite green via the inner filter effect. The linear ranges were 3 nmol L⁻¹ to 13 μmol L⁻¹ for Hg(ii), 3–170 μmol L⁻¹ for S²⁻ and 7–80 μmol L⁻¹ for malachite green, and the corresponding detection limits were 2.1 nmol L⁻¹ for Hg(ii), 1.3 μmol L⁻¹ for S²⁻ and 1.6 μmol L⁻¹ for malachite green.

Gum acacia-stabilized silver nanoparticles for the detection of Hg(ii), S²⁻ and malachite green.

Structural conversion of three copper(ii) complexes with snapshot observations based on the different crystal colours and morphology

Three novel Cu(ii) complexes [Cu₂(L)₂(MeOH)₂] (1), [Cu₂(L)₂(H₂O)₂] (2) and [CuL(H₂O)] (3) (L = (E)-2-((2-hydroxy-4-methoxybenzylidene)amino)acetic acid) have been obtained in different time scales of reaction processing. Complexes 1 and 2 are kinetically controlled products and 3 is a thermodynamically stable product. Single crystal X-ray diffraction analyses revealed that 1 and 2 are binuclear complexes except for different coordination solvents. 3 is a mononuclear complex. Complex 1 is mainly obtained in methanol solution, while 2 and 3 are stable in aqueous solvents. Based on the understanding of crystal structures of the three complexes, reversibly transforming crystal 2 to crystal 1 at room temperature has been realised, which has been confirmed by the change of colours and morphology measured by SEM. The research work is very important for controllable synthesis of coordination complexes.

Structural conversion of three novel Cu(ii) complexes [Cu₂(L)₂(MeOH)₂] (1), [Cu₂(L)₂(H₂O)₂] (2) and [CuL(H₂O)] (3) (L = (E)-2-((2-hydroxy-4-methoxybenzylidene)amino)acetic acid) in different time scales of reaction processing.

Bromide counterion as a spectroscopic sensor at the interface of cetyltrimethylammonium micelles

The strong UV absorption of the bromide in aqueous solution undergoes a remarkable red shift of more than 10 nm induced by the addition of the salts that constitute a saline buffer. The maximum absorption wavelength of the bromide is displaced from approximately 194 nm in ultrapure water to wavelengths above 200 nm, depending on the composition of the solution. The bromide spectrum as counterion of the cetyltrimethylammonium in the surfactant CTAB also shows sensitivity to the aggregation behavior of the tensioactive, being able to detect intermolecular interactions even at concentrations lower than the critical micelle concentration. And, when the micelles are assembled, the bromide absorption detects the interfacial rearrangements caused by the incorporation of ions. To know more about those interfacial features, the pyrene molecular probe was used, taking advantage of the extensive knowledge of its spectroscopy. Pyrene verifies the existence of changes in the interfacial organization which confirm that the sensitivity of the bromide spectrum is based on the ability of the ion to detect its microenvironment, and therefore reaffirms that its absorption spectrum can be used as a local sensor. The present work encourages the use of bromide as a sensor ion in the UV region between 190 and 210 nm, which would avoid the introduction of external molecular probes that could disturb the system.

Fast Determination of the Main Reduced Sulfur Species in Aquatic Systems by a Direct and Second-Derivative Spectrophotometric Method

The determination of reduced sulfur species in aquatic systems is not an easy and fast task to accomplish regarding the numerous possible interferences and risks of oxidation that occur with the usual methods of quantification. The method presented here is a direct spectrophotometric method that can be used to quantify sulfides, sulfites, and thiosulfates in a simple and rapid way. The principle is based on the comparison of second-derivative absorbance spectra of the same sample at different pH (9.2, 4.7, and 1.0) and selected absorption wavelengths (250 and 278 nm). This method has been successfully tested and has demonstrated liability to (i) avoid the biases due to absorbance overlaps between the different major chemical species and (ii) keep, as a direct method, the advantages over indirect methods on interferences reduction. The limits of detections (LOD) reached for total sulfide, sulfite, and thiosulfate are 1.37, 7.32, and 1.92 µM, respectively. The method displays low accuracy mean and low relative standard deviation (<4%) as well as a good linearity (R2 > 0.999). Accordingly, this method represents a very robust alternative in terms of cost and rapidity for the quantification of reduced sulfur species in different aquatic environments, from freshwaters to saline and polluted systems.

Novel microfluidic graphene oxide-protein amperometric biosensor for detecting sulfur compounds

Sulfur compounds are essential for many industries and organisms; however, they cause serious respiratory problems in human beings. Therefore, determination of sulfur concentration is of paramount importance. The research approach in the field of detecting contaminants has led to smaller systems that provide faster and more effective ways for diagnosis purposes. In this study, a novel portable amperometric graphene oxide-protein biosensor platform is investigated. The main characteristic of this structure is the implementation of a microfluidic configuration. With albumin metalloprotein as the biorecognition element, graphene oxide was synthesized and characterized by transmission electron microscopy and Fourier-transform infrared spectroscopy (FTIR). Albumin protein was stabilized on the surface of graphene oxide by the application of the N-(3-dimethylamionpropyl)-N-ethylcarbodiimide hydrochloride/N-hydroxysuccinimide method. The stabilization was confirmed by FTIR and electrochemistry analyses. The calibration curve of sulfur concentration was determined. When the graphene oxide-protein complex was stabilized by nephion on the surface of the microfluidic system, the response time reduced to 50 Sec, which is a relatively faster response among the similar studies and validated the significant effect of the microfluidic system. The nanosystem had an optimized pH of 7.4 and exhibited high sensitivity in determining sulfide. The results confirm that the portable graphene oxide-protein nanosystem has a fast and accurate response in detecting sulfide.

A gentle introduction to gasotransmitters with special reference to nitric oxide: biological and chemical implications

Nitric oxide (NO), carbon monoxide (CO) and hydrogen sulfide (H2S) are gaseous molecules of major impact in biology. Despite their toxicity, these molecules have profound effects on mammalian physiology and major implications in therapeutics. At tiny concentrations in human biology, they play key signaling and regulatory functions and hence are now labeled as “gasotransmitters.” In this literature survey, an introduction to gasotransmitters in relevance with NO, CO and H2S has been primarily focused. A special attention has been given to the conjoint physiological, pathophysiological and therapeutic aspects of NO in this work. In addition to the aforementioned elements of the investigation being reported, this report gives a detailed account of some of the recent advancements covering the NO release from both the nitro as well as nitroso compounds. The importance of the metallic center on the eve of producing the reduction center on NO and to develop photolabile properties have been elaborated within the effect of a few examples of metallic centers. Also, theoretical investigations that have been reported in the recent past and some other current theories pertaining to NO chemistry have been enlightened in this review. From the overall study, it is eminent that a number of facts are yet to be explored in context with NO for deeper mechanistic insights, model design for these molecules, other key roles and the search to find the best fit formalism in theoretical chemistry.

A simple and reliable method reducing sulfate to sulfide for multiple sulfur isotope analysis

RATIONALE

Precise analysis of four sulfur isotopes of sulfate in geological and environmental samples provides the means to extract unique information in wide geological contexts. Reduction of sulfate to sulfide is the first step to access such information. The conventional reduction method suffers from a cumbersome distillation system, long reaction time and large volume of the reducing solution. We present a new and simple method enabling the process of multiple samples at one time with a much reduced volume of reducing solution.

METHODS

One mL of reducing solution made of HI and NaH₂ PO₂ was added to a septum glass tube with dry sulfate. The tube was heated at 124°C and the produced H₂ S was purged with inert gas (He or N₂ ) through gas-washing tubes and then collected by NaOH solution. The collected H₂ S was converted into Ag₂ S by adding AgNO₃ solution and the co-precipitated Ag₂ O was removed by adding a few drops of concentrated HNO₃ .

RESULTS

Within 2-3 h, a 100% yield was observed for samples with 0.2-2.5 μmol Na₂ SO₄ . The reduction rate was much slower for BaSO₄ and a complete reduction was not observed. International sulfur reference materials, NBS-127, SO-5 and SO-6, were processed with this method, and the measured against accepted δ³⁴ S values yielded a linear regression line which had a slope of 0.99 ± 0.01 and a R² value of 0.998.

CONCLUSIONS

The new methodology is easy to handle and allows us to process multiple samples at a time. It has also demonstrated good reproducibility in terms of H₂ S yield and for further isotope analysis. It is thus a good alternative to the conventional manual method, especially when processing samples with limited amount of sulfate available.

Chemical Biology of H2S Signaling through Persulfidation

Signaling by H2S is proposed to occur via persulfidation, a posttranslational modification of cysteine residues (RSH) to persulfides (RSSH). Persulfidation provides a framework for understanding the physiological and pharmacological effects of H2S. Due to the inherent instability of persulfides, their chemistry is understudied. In this review, we discuss the biologically relevant chemistry of H2S and the enzymatic routes for its production and oxidation. We cover the chemical biology of persulfides and the chemical probes for detecting them. We conclude by discussing the roles ascribed to protein persulfidation in cell signaling pathways.

Sample handling and data processing for fluorescent excitation-emission matrix (EEM) of dissolved organic matter (DOM)

In environmental engineering and science, fluorescent excitation-emission matrix (EEM) has increasingly been utilized to characterize chromophoric dissolved organic matter (CDOM). This study aims to delineate EEM data processing, including calculation of total fluorescence (TF) which is an emerging water quality parameter often used as a surrogate for micropollutant removal by advanced water treatment processes. In addition, sample handling procedures such as storage, use of preservatives, and oxidant quenching agents were evaluated. In this study, three antimicrobial preservatives were tested: sodium azide, sodium omadine, and thymol. All the tested preservatives altered optical properties of samples, and were therefore not suitable for the preservation of EEM samples. Without preservative, storage of samples at 4 °C maintained TF within 7.5% of its original value for 21 days, while TF of samples stored at the room temperature more drastically changed (up to 15%). The impacts of three oxidant quenching agents including ascorbic acid, sodium bisulfite, and sodium thiosulfate on EEM were also tested. Among the quenching agents, sodium bisulfite was found to be suitable since it little influenced optical properties of samples while the other two were not favorable due to interference. We also scrutinized the use of TF as surrogate to monitor micropollutant rejection by nanofiltration membrane.

Detection of Sulfide Using Mercapto Tetrazine-Protected Fluorescent Gold Nanodots: Preparation of Paper-Based Testing Kit for On-Site Monitoring

This work demonstrates the development of a highly sensitive method to detect and quantify sulfide ions (S^2-) in water samples. First, we synthesized 6-mercapto-s-triazolo(4,3-b)-s-tetrazine (MTT) by the reaction between formaldehyde and 4-amino-3-hydrazino-5-mercapto-1,2,4-triazole at room temperature. The synthetic MTT was used as a capping ligand for the synthesis of gold nanodots (AuNDs) via a one-pot green method at room temperature with only a 10 min reaction time. Transmission electron microscopy images exhibited that the MTT-AuNDs have an average particle size of 1.9 nm and an emission maximum at 672 nm upon excitation at 360 nm. The synthesized highly red emissive MTT-AuNDs are used as specific fluorescent probes for the detection of S^2-. The fluorescence of MTT-AuNDs was significantly and dose-dependently quenched by the addition of S^2-. The observed fluorescence quenching was ascribed to the formation of an Au₂S complex, which was determined by Raman and mass spectroscopy. A good linearity was achieved for the increasing concentration of S^2- from 870 nM to 16 μM, and the detection limit was found to be 2 nM (S/N = 3). The S^2- detection system that is described in this study was validated and agreed well with the standard methylene blue method. Furthermore, the present sensor was examined for its use in quantifying S^2- in real water samples obtained from lakes and rivers. In addition, the specificity was checked against the most likely ion interferences in real water. Moreover, a cost-effective and viable paper-based S^2- sensor was fabricated for environmental monitoring based on the use of MTT-AuNDs. The developed system would be an environmentally friendly and easy-to-use detection device for S^2- in water.

High Pressure Size Exclusion Chromatography (HPSEC) Determination of Dissolved Organic Matter Molecular Weight Revisited: Accounting for Changes in Stationary Phases, Analytical Standards, and Isolation Methods

We reassessed the molecular weight of dissolved organic matter (DOM) determined by high pressure size exclusion chromatography (HPSEC) using measurements made with different columns and various generations of polystyrenesulfonate (PSS) molecular weight standards. Molecular weight measurements made with a newer generation HPSEC column and PSS standards from more recent lots are roughly 200 to 400 Da lower than initial measurements made in the early 1990s. These updated numbers match DOM molecular weights measured by colligative methods and fall within a range of values calculated from hydroxyl radical kinetics. These changes suggest improved accuracy of HPSEC molecular weight measurements that we attribute to improved accuracy of PSS standards and changes in the column packing. We also isolated DOM from wetlands in the Prairie Pothole Region (PPR) using XAD-8, a cation exchange resin, and PPL, a styrene-divinylbenzene media, and observed little difference in molecular weight and specific UV absorbance at 280 nm (SUVA₂₈₀) between the two solid phase extraction resins, suggesting they capture similar DOM moieties. PPR DOM also showed lower SUVA₂₈₀ at similar weights compared to DOM isolates from a global range of environments, which we attribute to oxidized sulfur in PPR DOM that would increase molecular weight without affecting SUVA₂₈₀.

A dual indicator approach for monitoring benthic impacts from organic enrichment with test application near Atlantic salmon farms

The organic enrichment of surficial sediments has a known effect on benthic faunal communities due largely to oxygen depletion and sulfide toxicity. Total dissolved sulfide (free S^-2=H₂S+HS^-+S^2-) concentrations in sediments are widely measured as a practical indicator of community effects. However, the standard ion selective electrode (ISE) method for free S^-2 analysis can provide biased results owing to the inclusion of non-toxic mineral sulfides and the oxidation and volatilization of free S^-2. A rapid field protocol was developed that alleviates these problems while also providing data on dissolved oxygen concentrations. Sediments collected near salmon aquaculture pens over cohesive and permeable substrates were analysed using the standard and new protocols. The results confirm previous conclusions of artifacts with the standard ISE method, while the dual indicator approach more accurately describes the stages, spatial extent and magnitude of sediment geochemical alterations affecting benthic communities.

Cupriavidus necator H16 Uses Flavocytochrome c Sulfide Dehydrogenase To Oxidize Self-Produced and Added Sulfide

Production of sulfide (H₂S, HS^-, and S^2-) by heterotrophic bacteria during aerobic growth is a common phenomenon. Some bacteria with sulfide:quinone oxidoreductase (SQR) and persulfide dioxygenase (PDO) can oxidize self-produced sulfide to sulfite and thiosulfate, but other bacteria without these enzymes release sulfide into the medium, from which H₂S can volatilize into the gas phase. Here, we report that Cupriavidus necator H16, with the fccA and fccB genes encoding flavocytochrome c sulfide dehydrogenases (FCSDs), also oxidized self-produced H₂S. A mutant in which fccA and fccB were deleted accumulated and released H₂S. When fccA and fccB were expressed in Pseudomonas aeruginosa strain Pa3K with deletions of its sqr and pdo genes, the recombinant rapidly oxidized sulfide to sulfane sulfur. When PDO was also cloned into the recombinant, the recombinant with both FCSD and PDO oxidized sulfide to sulfite and thiosulfate. Thus, the proposed pathway is similar to the pathway catalyzed by SQR and PDO, in which FCSD oxidizes sulfide to polysulfide, polysulfide spontaneously reacts with reduced glutathione (GSH) to produce glutathione persulfide (GSSH), and PDO oxidizes GSSH to sulfite, which chemically reacts with polysulfide to produce thiosulfate. About 20.6% of sequenced bacterial genomes contain SQR, and only 3.9% contain FCSD. This is not a surprise, since SQR is more efficient in conserving energy because it passes electrons from sulfide oxidation into the electron transport chain at the quinone level, while FCSD passes electrons to cytochrome c The transport of electrons from the latter to O₂ conserves less energy. FCSDs are grouped into three subgroups, well conserved at the taxonomic level. Thus, our data show the diversity in sulfide oxidation by heterotrophic bacteria.IMPORTANCE Heterotrophic bacteria with SQR and PDO can oxidize self-produced sulfide and do not release H₂S into the gas phase. C. necator H16 has FCSD but not SQR, and it does not release H₂S. We confirmed that the bacterium used FCSD for the oxidation of self-produced sulfide. The bacterium also oxidized added sulfide. The common presence of SQRs, FCSDs, and PDOs in heterotrophic bacteria suggests the significant role of heterotrophic bacteria in sulfide oxidation, participating in sulfur biogeochemical cycling. Further, FCSDs have been identified in anaerobic photosynthetic bacteria and chemolithotrophic bacteria, but their physiological roles are unknown. We showed that heterotrophic bacteria use FCSDs to oxidize self-produced sulfide and extraneous sulfide, and they may be used for H₂S bioremediation.

Unveiling the transformation and bioavailability of dissolved organic matter in contrasting hydrothermal vents using fluorescence EEM-PARAFAC

The submarine hydrothermal systems are extreme environments where active cycling of dissolved organic matter (DOM) may occur. However, little is known about the optical properties and bioavailability of hydrothermal DOM, which could provide valuable insights into its transformation processes and biogeochemical reactivity. The quantity, quality, and bioavailability of DOM were investigated for four very different hydrothermal vents east of Taiwan, using dissolved organic carbon (DOC), absorption spectroscopy, and fluorescence excitation-emission matrices-parallel factor analysis (EEM-PARAFAC). The DOC and absorption coefficient a₂₈₀ were both lower in the two hydrothermal vents off the Orchid Island and on the Green Island than in the surrounding seawater and the two vents off the Kueishantao Island, indicating effective removals of DOM in the former two hydrothermal systems owing to possible adsorption/co-precipitation and thermal degradation respectively. The four hydrothermal DOM showed notable differences in the absorption spectral slope S_275-295, humification index HIX, biological index BIX, EEM spectra, and the relative distributions of seven PARAFAC components. The results demonstrated a high diversity of chemical composition and transformation history of DOM under contrasting hydrothermal conditions. The little change in the hydrothermal DOC after 28-day microbial incubations indicated a low bioavailability of the bulk DOM, and different PARAFAC components showed contrasting bioavailability. The results have profound implications for understanding the biogeochemical cycling and environmental effects of hydrothermal DOM in the marine environments.

Spectroscopic study of Se(IV) removal from water by reductive precipitation using sulfide

This study investigates the removal of selenium (IV) from water by reductive precipitation using sodium sulfide at neutral pH. Also, it examines the application of UV light as an activating method to enhance reductive precipitation. Furthermore, this work evaluates the effects of sulfide dose and solution pH on behavior of Se(IV) reduction. Selenium was effectively removed in sulfide solution at both neutral and acidic pH. UV irradiation did not enhance removal efficiency of Se(IV) at conditions tested, but it affected solids morphology and composition. SEM/EDS and XPS results showed that selenite was reduced to elemental Se or Se-S precipitates (e.g. SenS8-n) in sulfide solution. High resolution S 2p XPS spectra suggested the presence of sulfur-containing anions (e.g. S2O3(2-), HSO3(-), etc.) or elemental S (S(0)), monosulfide (S(2-)), and polysulfides (Sn(2-)), which could be produced from sulfide photolysis or reaction with Se. In addition, large aggregates of irregular shape, which suggest Se-S precipitates or elemental sulfur, were found more prominently at pH 4 than at pH 7, and they were more noticeable in the presence of UV with longer reaction times. In addition, XRD patterns showed that gray elemental Se solids were dominant in experiments without UV, whereas Se-S precipitates (Se3S5) with an orange color were found in those with UV.

Performance of a New 235 nm UV-LED-Based On-Capillary Photometric Detector

In this work, for the first time, a sub-250 nm light-emitting diode (LED) is investigated as a light source for optical detection in chemical analysis. A 235 nm deep ultraviolet-light-emitting diode (UV-LED) is employed within an on-capillary photometric detector and applied in capillary ion-exchange chromatography (IEC) for the detection of common ultraviolet (UV)-absorbing anions (here, iodide, nitrate, and nitrite). This investigation focused on fundamental properties of UV-LEDs, in particular, emission spectra, radiometric power, effective heat dissipation with a passive heat sink, and energy conversion. The detection showed excellent linearity with stray light down to 0.6%, and an effective path length at 92% of the used capillary inner diameter. The analytical performance parameters were demonstrated by detection of chromatographic separation of iodide in simulated seawater, showing a limit of detection (LOD) of 1.30 μmol L^-1, a linear range of 7.9-3937 μmol L^-1, and reproducibility (with a relative standard deviation (RSD)) of 0.6% for peak height 0.7% for peak area. In addition, nitrite and nitrate were selected to study the potential of using deep UV-LEDs as the light source in photometric detection for even lower-wavelength-absorbing analytes (λ_max = 209 nm for nitrite and 200 nm for nitrate), showing reproducibility (RSD = 1.2% and 3.6% for peak height and 0.9% and 2.9% for peak area, respectively) and LOD = 7 and 26 μmol L^-1.

Amperometric inhibitive biosensor based on horseradish peroxidase-nanoporous gold for sulfide determination

As a well-known toxic pollutant, sulfide is harmful to human health. In this study, a simple and sensitive amperometric inhibitive biosensor was developed for the determination of sulfide in the environment. By immobilizing nanoporous gold (NPG) on glassy carbon electrode (GCE), and encapsulating horseradish peroxidase (HRP) onto NPG, a HRP/NPG/GCE bioelectrode for sulfide detection was successfully constructed based on the inhibition of sulfide on HRP activity with o-Phenylenediamine (OPD) as a substrate. The resulted HRP/NPG/GCE bioelectrode achieved a wide linear range of 0.1–40 μM in sulfide detection with a high sensitivity of 1720 μA mM⁻¹ cm⁻² and a low detection limit of 0.027 μM. Additionally, the inhibition of sulfide on HRP is competitive inhibition with OPD as a substrate by Michaelis-Menten analysis. Notably, the recovery of HRP activity was quickly achieved by washing the HRP/NPG/GCE bioelectrode using differential pulse voltammetry (DPV) technique in deaerated PBS (50 mM, pH 7.0) for only 60 s. Furthermore, the real sample analysis of sulfide by the HRP/NPG/GCE bioelectrode was achieved. Based on above results, the HRP/NPG/GCE bioelectrode could be a better choice for the real determination of sulfide compared to inhibitive biosensors previously reported.

Intracellular detection of Cu(2+) and S(2-) ions through a quinazoline functionalized benzimidazole-based new fluorogenic differential chemosensor

A new quinazoline functionalized benzimidazole-based fluorogenic chemosensor H3L is synthesized and fully characterized by conventional techniques including single crystal X-ray analysis. It acts as a highly selective colorimetric and fluorescence sensor for Cu(2+) ions in DMF/0.02 M HEPES (1 : 1, v/v, pH = 7.4) medium. Reaction of H3L with CuCl2 forms a mononuclear copper(ii) [Cu(Cl)(H2L)(H2O)] (H2L-Cu(2+)) complex which is characterized by conventional techniques and quantum chemical calculations. Electronic absorption and fluorescence titration studies of H3L with different metal cations show a distinctive recognition only towards Cu(2+) ions even in the presence of other commonly coexisting ions such as Li(+), Na(+), K(+), Mg(2+), Ca(2+), Fe(2+), Fe(3+), Mn(2+), Co(2+), Ni(2+), Zn(2+), Cd(2+) and Hg(2+). Moreover, H2L-Cu(2+) acts as a metal based highly selective and sensitive chemosensor for S(2-) ions even in the presence of other commonly coexisting anions such as F(-), Cl(-), Br(-), I(-), SO4(2-), SCN(-), AcO(-), H2PO4(-), PO4(3-), NO3(-), ClO4(-), NO2(-), HSO4(-), HSO4(2-), S2O3(2-), S2O8(2-), CN(-), CO3(2-) and HCO3(-) in DMF/0.02 M HEPES (1 : 1, v/v, pH = 7.4) medium. Quantification analysis indicates that these receptors, H3L and H2L-Cu(2+), can detect the presence of Cu(2+) and S(2-) ions at very low concentrations of 1.6 × 10(-9) M and 5.2 × 10(-6) M, respectively. The propensity of H3L as a bio-imaging fluorescent probe for detection of Cu(2+) ions and sequential detection of S(2-) ions by H2L-Cu(2+) in Dalton lymphoma (DL) cancer cells is also shown.