Transfer and Degradation of PAHs in the Soil-Plant System: A Review

New insights into rhizosphere bacterial community shaped by lettuce genotypes for divergent degradation efficiencies of phthalates

Rhizosphere dissipation of organic pollutants benefits safe utilization of the polluted agricultural soil. Nevertheless, dissipation variation of phthalates (PAEs) in rhizosphere among different vegetable genotypes and the related microbial mechanisms remain unknown. Here, twelve lettuce cultivars with different genetic relationships identified by 18S rRNA gene sequencing were cultivated in soil spiked with di-(2-ethylhexyl) phthalate (DEHP). Bacterial communities and function genes in rhizosphere of lettuce were analyzed by 16S rRNA gene and metagenomic sequencing. Results showed significant variations in DEHP concentrations of roots (2.8-15.3 mg/kg) and shoots (0.70-1.8 mg/kg) among 12 cultivars. Notably, cultivars L11 and L12 showed the lowest DEHP accumulation in roots and shoots, being lower by 82 % and 58 % than the highest accumulators (cultivars L5 and L6), respectively. This accumulation variation was closely connected with their genetic relationships and exhibited genotype-dependent trait. The significantly different bacterial community diversities and structures were recorded in rhizosphere among 12 cultivars. Especially, bacterial communities in rhizosphere of cultivars L11 and L12 (low-DEHP accumulators with high DEHP dissipation) strengthened their adaptation by enriching pollutant-resistant taxa, increasing extracellular polymeric substance contents and biofilm formation, as well as constructing complex ecological networks under DEHP pollution. Moreover, PAE-degrading bacteria and genes (e.g., hydrolase65, phtAb, and pcaI) in rhizosphere were enriched by low-DEHP accumulators, which benefited DEHP removal and subsequently safe agricultural products. This study provides new insights into microbial mechanisms on rhizosphere DEHP degradation and its correlation with accumulation variation among different crop genotypes.

Investigating the co-transport and combined toxicity effect of micro-/nano-plastics and PAHs in ryegrass

The potential for micro-/nano-plastics (MNPs) to translocate from environmental matrices into organisms has been increasingly substantiated. However, the mechanisms underlying the co-transport and combined toxicity of MNPs in conjunction with organic pollutants in organisms remain inadequately understood. This study investigated the transport mechanisms and toxicity responses of ryegrass (Lolium perenne L.) to the co-existence of MNPs and polycyclic aromatic hydrocarbons (PAHs) through hydroponic experiments. Laser confocal characterization and flow cytometry quantification revealed that, under combined exposure, MNPs larger than 30 μm were rarely able to enter ryegrass roots, whereas those ranging from 0.1 to 10 μm were not only absorbed by the roots but also translocated to the shoots. Quantitative analysis of the contaminants in ryegrass revealed that the presence of MNPs significantly reduced the effective concentration of PAHs in the hydroponic solution, thereby decreasing the content of PAHs within the plant tissues. A significant negative Spearman correlation (rs = -0.56, p < 0.05) between the translocation factors (TFs) of MNPs and phenanthrene (Phe), suggesting a potential competitive inhibition mechanism during the translocation of MNPs and PAHs within plants. This competitive inhibition in translocation of PAHs within ryegrass was found to be more pronounced with decreasing particle size of MNP (rs = 0.76, p < 0.05). An integrated biomarker response (IBR) analysis, encompassing plant biomass, photosynthetic pigments, and antioxidant enzymes, revealed that the inhibition of co-existing MNPs on the uptake and translocation of PAHs by plants alleviated the phytotoxicity of PAHs, with the extent of alleviation depending on the exposure duration and particle size of the MNPs.

Endophytic Bacterial Communities Facilitate the Dissipation of Phthalates in Soil and Their Biodegradation in Oryza Sativa L

The role of endophytic bacterial communities in aiding the degradation of organic pollutants like phthalates (PAEs) in soil and in planta, as well as their effects on pollutant accumulation in plants, remains unclear. Herein, microcosm experiments were conducted with rice cultivated in agricultural soil polluted with di(2-ethylhexyl) phthalate (DEHP) and further verified with PAE-degrading endophytic consortia. Soil indigenous microbes, especially PAE-degrading bacteria, significantly contributed to DEHP dissipation in soil and diminished DEHP accumulation in rice. Endophytic bacterial communities participated in DEHP degradation in planta, as validated by efficient DEHP degradation by in vitro culturable endophytic consortia and abundant PAE-degrading genes. The inoculation of PAE-degrading endophytic consortia demonstrated their immigration between soil and roots (especially in low-PAE-accumulating cultivar), which enhanced DEHP degradation in soil and in planta and subsequently reduced rice PAE accumulation. This study underscores the facilitative role of endophytic bacterial communities in PAE degradation and in lowering PAE accumulation in crops.

Research on bioaugmented slurry remediation of PAHs in actual contaminated soil: Screening microbial agents and optimizing key parameters

Bioaugmented slurry technology is a sustainable remediation technology for PAHs-contaminated soil. However, the lack of experimental data on the remediation of complex, actual contaminated soils has hindered the practical application of this technology. This study explored the bioaugmented degradation of PAHs using actual soil slurry with and without the addition of microbial agents in the microscopic world. NS4 has the highest degradation efficiency. The response surface method was used to determine the effects of water-soil ratio, temperature, aeration rate and their interaction on the degradation of PAHs. Temperature significantly affects the degradation of phenanthrene, and the aeration rate significantly affects the degradation of pyrene. The influence of each factor follows the order: aeration rate > temperature > water-soil ratio. The highest degradation rates of phenanthrene and pyrene are observed at a water-soil ratio of 3:1, a temperature of 30 °C, and an aeration rate of 2 L/min. Under the optimal conditions, the addition of either peptone or Tween-80 increased the degradation rate. Peptone and Tween-80 can effectively enhance the growth rate of microorganisms and the release of PAHs in actual contaminated soil. In conclusion, by screening microbial agents suitable for real contaminated soils and maintaining the dynamic stability of the bioaugmented slurry system by optimizing key influencing factors, efficient, green, and low-energy remediation of PAHs-contaminated sites can be achieved.

Fugacity-based multimedia transport modeling and risk assessment of PAHs in Urumqi

Currently, there is a lack of a comprehensive understanding of the behavior of polycyclic aromatic hydrocarbons (PAHs) in complex multimedia urban environmental systems. Taking Urumqi City as a case study, we developed an integrated multimedia urban environmental model to simulate the inter-media transport processes of PAHs across air, water, soil, sediment, vegetation, and impervious surfaces. The predictive results of this model were in good agreement with the actual monitoring data from 2021, confirming its accuracy. Notably, the simulated data for 2021 indicate that the total amount of PAHs in the soil reached 1.06 × 106 kg, accounting for 97.44% of the total PAHs in Urumqi City, highlighting soil as the primary sink for PAHs. Further analysis of transport fluxes revealed that atmospheric transfer pathways to soil and vegetation are the main mechanisms driving the distribution of PAHs in urban environments. Additionally, sensitivity analysis identified temperature, soil, and vegetation-related parameters as the primary factors influencing PAHs. Based on the simulated concentration, the risk assessment results showed that soil PAHs had a higher risk of carcinogenesis to human body. This study deepens our understanding of the behavior of PAHs in urban environments and provides insights into how human activities affect the fate and transformation of these contaminants in multimedia urban systems.

Distribution characteristics, source analysis and ecological risk assessment of PAHs in tea garden soil in China

In this study, we collected 177 soil samples from major tea-producing areas in China, systematically investigated the spatial distribution characteristics of the polycyclic aromatic hydrocarbons (PAHs) in the soil of these tea plantations and discussed the environmental factors influencing of the PAHs in tea garden soil. The feature ratio method and source analysis methods were used to determine the PAHs source in tea garden soil, and the potential risk of PAHs in tea garden soil was also evaluated. The results showed that the concentrations of the 16 PAHs in 177 samples ranged from 6.21 to 4068.91 ng g-1, with an average of 257.00 ng g-1. The majority of PHAs in tea garden soils predominantly contained a 5-6 ring pattern, and the highest content was indeno (1,2,3-cd) pyrene (InP, 23%) and benzo (b) fluoranthrene (BbF, 16%). In addition, 10.16% of the PAHs in tea plantation soils contained a 2-3-ring pattern, with naphthalene (NAP) having the highest content. PAH source in Chinese tea garden soil was predominantly mixed combustion, such as incomplete biomass combustion, petroleum combustion, coal combustion and wood combustion. The PAHs distribution was mainly affected by the industrial structure, geographical location of tea plantation, climatic conditions, soil properties and other factors in different regions. According to the Dutch Maliszewska-Kordybach grading standard, 79% of the soil samples from Chinese tea plantations were classified as unpolluted, 13% as mildly polluted, and 2% and 6% as moderately and severely polluted, respectively. Although the PAH pollution in tea plantations was generally low, BaP and InP pose significant ecological risk in some areas. Therefore, strategies such as effective guidelines and environmentally friendly technologies, must be developed to reduce the risk of PAH pollution in tea plantation soils.

Enhancing Biodegradation of Insoluble High Molecular Weight Polycyclic Aromatic Hydrocarbons in Macroemulsion (ME) Bioreactors with a Liquid-Liquid Interface

Due to the low bioavailability and insolubility of high molecular weight polycyclic aromatic hydrocarbons (HMW-PAHs) in aqueous solutions, their degradation efficiency is significantly limited in wastewater treatment and environmental remediation. To address this challenge, we designed oil-in-water (O/W) macroemulsion (ME) bioreactors with mixed surfactants (Tween-80 and Triton X-100), n-butanol, corn oil, and Burkholderia vietnamiensis (BVs) to enhance the degradation efficiency of pyrene. Owing to the higher solubility of pyrene in MEs, it could be easily adsorbed onto hydrophobic groups on the cell surface. Furthermore, the fluorescence images showed that the BVs were adsorbed on the surface of the MEs, increasing the contact frequency and interactions between pyrene and BVs. Meanwhile, the degradation efficiency of the prepared ME bioreactor was improved by up to 198% compared to that of the conventional surfactant. Therefore, the constructed ME bioreactors can provide green guidance for HMW-PAH biodegradation in industrial wastewater and environmental remediation.

Transformative knowledge of polar polycyclic aromatic hydrocarbons via high-resolution mass spectrometry

Polycyclic aromatic hydrocarbons (PAHs) are toxic contaminants with a widespread presence in diverse environmental contexts. Transformation processes of PAHs via degradation and biotransformation have parallels in humans, animals, plants, fungi, and bacteria. Mapping the transformation products of PAHs is therefore crucial for assessing their toxicological impact and developing effective monitoring strategies. The present research aimed to explore the PAH detoxification products formed by the marine fish Atlantic haddock (Melanogrammus aeglefinus) after single PAH treatments. Using target and suspect screening analyses on an ion mobility quadrupole time-of-flight mass spectrometer (IM-QTOF MS), deprotonated compounds were identified and archived into a metabolite mass spectral library, which is systematized and presented in this work. The results offer an exclusive overview of the transformation products and their associated mass spectral features. Transformation products include hydroxy compounds, dihydrodiols, polycyclic aromatic acids, glucuronides, sulfates, glutathiones, cysteinylglycines, cysteines, and mercapturic acids. By documenting high-resolution mass spectrometry data, this comprehensive characterization provides a valuable reference point for the development of broad-spectrum analytical methods. It also addresses a critical gap in the field by presenting tentative identifications of PAH transformation products in the absence of analytical standards. Moreover, it encourages further investigation of these compounds as they have important toxicological relevance in both ecotoxicology and human research.

Coupling polyethylene microplastics with other pollutants: Exploring their combined effects on plant health and technologies for mitigating toxicity

The presence of microplastics in agricultural soils has raised concerns regarding their potential impacts on ecosystem health and plant growth. The introduction of microplastics into soil can alter its physicochemical properties, leading to adverse effects on plant development. Furthermore, the adsorption capabilities of microplastics may enhance the toxicity of soil pollutants, potentially resulting in detrimental effects on plant life. Large-sized microplastics may become adhered to root surfaces, impeding stomatal function and restricting nutrient uptake. Conversely, smaller microplastics and nano-plastics may be internalized by plants, causing cellular damage and genotoxicity. In addition, the presence of microplastics in soil can indirectly affect plant growth and development by altering the soil environment. Therefore, it is essential to investigate the potential impacts of microplastics on agricultural ecosystems and develop strategies to mitigate their effects. This review describes the adsorption power between polyethylene microplastics and pollutants (heavy metals, polycyclic aromatic hydrocarbons and antibiotics) commonly found in agricultural fields and the factors affecting the adsorption process. Additionally, the direct and indirect effects of microplastics on plants are summarized. Most of the single or combined microplastic contaminants showed negative effects on plant growth, with a few beneficial effects related to the characteristics of the microplastics and environmental factors. Currently microbial action and the application of soil conditioners or plant growth promoters can alleviate the effects of microplastics on plants to a certain extent. In light of the complex nature of soil environments, future research should concentrate on mitigate and control these interactions and the impact of compound pollution on ecosystems.

Phytoremediation of trichloroethylene in the soil/groundwater environment: Progress, problems, and potential

Trichloroethylene (TCE) poses a significant environmental threat in groundwater and soil, necessitating effective remediation strategies. Phytoremediation offers a cost-effective and environmentally friendly approach to remediation. However, the mechanisms governing plant uptake, volatilisation, and degradation of TCE remain poorly understood. This review explores the mechanisms of TCE phytoremediation, metabolic pathways, and influencing factors, emphasizing future research directions to improve the understanding of TCE phytoremediation. The results showed that although the proportion of TCE phytovolatilisation is limited, it is important at sites chronically contaminated with TCE. The rhizosphere is a key microzone for pollutant redox reactions that significantly enhance its effectiveness when its characteristics are fully utilised and manipulated through reinforcement. Future research should focus on manipulating microbial communities through methods such as the application of endophytic bacteria and genetic modification. However, practical applications are in their infancy and further investigation is needed. Furthermore, many findings are based on non-uniform parameters or unstandardised methods, making them difficult to compare. Therefore, future studies should provide more standardised experimental parameters and employ accurate and standardised methods to develop suitable prediction models, enhancing data comparability and deepening our understanding of plant detoxification mechanisms.

Integrated assessment of soil quality and contaminant risks in salinized farmland adjacent to an oil-exploitation zone: insights from the Yellow River Delta

Intensified industrial activities significantly threaten farmland soil integrity, particularly in salinized regions. However, comprehensive evaluations of soil fertility and contamination by polycyclic aromatic hydrocarbons (PAHs) remain limited. In this study, we assessed soil quality in China's Yellow River Delta (YRD) by quantifying 13 indicators of soil physicochemical and biological properties, along with 11 PAHs. Our findings reveal that the minimum data set approach provides a robust and comprehensive representation of overall soil fertility. Salinity emerged as the primary limiting factor, with strong correlations between salinity and key ions, highlighting its adverse effects on soil structure and function. Additionally, significant PAH contamination was detected, particularly from benzo[a]anthracene (BaA), fluoranthene (Flu), and chrysene (Chr), as indicated by the Nemerov pollution index. A pronounced negative correlation between the soil quality index (SQI) and the soil environmental index (SEI) underscores the substantial role of PAH pollution in soil degradation. Notably, the SQI integrates both SEI and soil fertility, providing a holistic assessment of soil health. These findings highlight the utility of SQI as a diagnostic tool for evaluating soil degradation and emphasize the need for targeted remediation strategies to address salinity and PAH contamination, thereby promoting soil restoration and agricultural sustainability.

Improved microbial-plant soil bioremediation of PAHs and heavy metal through in silico methods

The combined pollution of polycyclic aromatic hydrocarbons (PAHs) and organic cadmium (Cd) in farmland soils, and the field controlling strategy need to be studied urgently. In this study, 5 PAHs, 5 Cd and 11 soil conditioners were selected to explore the co-exposure risk and remediation efficiency. Firstly, a significant combination Fl-alkylalkoxy cadmium was obtained using forward and reverse methods coupling variation coefficient methods (the combined pollution value was 0.173). Secondly, the interaction energy of microbial degradation / plant absorption of Fl under Cd stress, and microbial mineralization / plant absorption of alkylalkoxy cadmium under PAHs stress were characterized using factorial experimental design, molecular docking and molecular dynamics simulation. The combined pollution of alkylalkoxy cadmium and dialkyl cadmium, phenanthrene and Benzo [a] pyrene was significant (synergistic contribution rates were 17.58 % and 19.22 %, respectively). In addition, 6 soil conditioners with significant efficiency were selected to design Taguchi orthogonal experimental schemes, indicating the microbial degradation / mineralization and plant absorption were significantly effective (the maximum increase of remediation efficiency was 93.81 %) under the combinations (i.e., trratone, coumarol, fulvamic acid, potassium fertilizer and others, etc.). Finally, it was found that the soil conditioners affected the hydrophobic groups and forces, and the efficiency was proportional to the highest peak value and minimum distance in the RDF curve. This study identifies the risk characteristics of co-exposure of PAHs and Cd and screens effective soil conditioners, providing theoretical guidance for risk controlling.

Indole-3-acetic acid enhances the co-transport of proton and phenanthrene mediated by TaSAUR80-5A in wheat roots

Polycyclic aromatic hydrocarbons (PAHs) are a type of organic pollution that can accumulate in crops and hazard human health. This study used phenanthrene (PHE) as a model PAH and employed hydroponic experiments to illustrate the role of indole-3-acetic acid (IAA) in the regulation of PHE accumulation in wheat roots. At optimal concentrations, wheat roots treated with PHE + IAA showed a 46.9% increase in PHE concentration, whereas treatment with PHE + P-chlorophenoxyisobutyric acid resulted in a 38.77% reduction. Transcriptome analysis identified TaSAUR80-5A as the crucial gene for IAA-enhancing PHE uptake. IAA increases plasma membrane H+-ATPase activity, promoting active transport of PHE via the PHE/H+ cotransport mechanism. These results provide not only the theoretical basis necessary to better understand the function of IAA in PAHs uptake and transport by staple crops, but also a strategy for controlling PAHs accumulation in staple crops and enhancing phytoremediation of PAH-contaminated environments.

Bioremediation of petroleum-contaminated soil based on both toxicity risk control and hydrocarbon removal-progress and prospect

Petroleum contamination remains a worldwide issue requiring cost-effective bioremediation techniques. However, establishing a universal bioremediation strategy for all types of oil-polluted sites is challenging. This difficulty arises from the heterogeneity of soil textures, the complexity of oil products, and the variations in local climate and environment across different oil-contaminated regions. Several factors can impede bioremediation efficacy: (i) differences in bioavailability and biodegradability between aliphatic and aromatic fractions of crude oil; (ii) inconsistencies between hydrocarbon removal efficiency and toxicity attenuation during remediation; (iii) varying adverse effect of aliphatic and aromatic fractions on soil microorganisms. This review examines the ecotoxicity risk of petroleum contamination to soil fauna and flora. It also discusses three primary bioremediation strategies: biostimulation with nutrients, bioaugmentation with petroleum degraders, and phytoremediation with plants. Based on current research and state-of-the-art challenges, we highlighted future research scopes should focus on (i) exploring the ecotoxicity differentiation of aliphatic and aromatic fractions of crude oil, (ii) establishing unified risk factors and indicators for evaluating oil pollution toxicity, (iii) determining the fate and transformation of aliphatic and aromatic fractions of crude oil using advanced analytical techniques, and (iv) developing combined bioremediation techniques that improve petroleum removal and ecotoxicity attenuation.

The application of PAHs-Degrading Pseudomonas aeruginosa to mitigate the phytotoxic impact of pyrene on barley (Hordeum vulgare L.) and broad bean (Vicia faba L.) plants

Mitigating the negative impacts of polycyclic aromatic hydrocarbons (PAHs) is an urgent need due to their toxicity and persistence in the environment. This study investigated the use of Pseudomonas aeruginosa ASU-B6 to detoxify pyrene (PY). The bacterium P. aeruginosa ASU-B6 is capable of degrading PY by 92% as a sole carbon source after 15 days of incubation with phthalate being the major metabolic product. In this regard, the impact of pyrene (PY), P. aeruginosa ASU-B6 (ASU-B6), the bacterial strain combined with pyrene (ASU-B6/PY) and the metabolites produced after pyrene degradation (PY-metabolites) on the germination and physiological attributes of Hordeum vulgare and Vicia faba seedlings were studied. A single application of PY or ASU-B6 showed a toxic effect on the germination of both tested seeds. Interestingly, broad bean seedlings exhibited less sensitivity to PY stress in terms of growth and metabolism compared to barley. Notably, ASU-B6 inhibited fresh and dry weight of shoots and roots of barley and, to a lesser extent, reduced the germination of broad beans compared to the control. However, the combined PY-metabolites and ASU-B6/PY showed a mutual ameliorative effect on seedlings growth, alleviating the phytotoxic impact of each component. Pyrene reduced the virulence of ASU-B6 by inhibiting the production of pyocyanin pigment, while bacteria ameliorated pyrene toxicity through its degradation. Heatmap and principal component analyses highlighted that increasing the contents of hydrogen peroxide, superoxide anion, hydroxyl radical, and lipid peroxidation positively correlated to the toxicity of PY or ASU-B6. However, improving the antioxidant system which buffers the oxidative stress induced by different combinations of PY and ASU-B6 enhanced the growth of germinated seedlings corresponding to PY or ASU-B6. This study reflected the role of ASU-B6 in ameliorating PY-phytotoxicity. In addition, the application of ASU-B6 strain is recommended as a prospective candidate for remediation of PAHs-contaminated environment with a positive impact on the plant growth and metabolic products.

Plant Defense Mechanisms against Polycyclic Aromatic Hydrocarbon Contamination: Insights into the Role of Extracellular Vesicles

Polycyclic aromatic hydrocarbons (PAHs) are persistent organic pollutants that pose significant environmental and health risks. These compounds originate from both natural phenomena, such as volcanic activity and wildfires, and anthropogenic sources, including vehicular emissions, industrial processes, and fossil fuel combustion. Their classification as carcinogenic, mutagenic, and teratogenic substances link them to various cancers and health disorders. PAHs are categorized into low-molecular-weight (LMW) and high-molecular-weight (HMW) groups, with HMW PAHs exhibiting greater resistance to degradation and a tendency to accumulate in sediments and biological tissues. Soil serves as a primary reservoir for PAHs, particularly in areas of high emissions, creating substantial risks through ingestion, dermal contact, and inhalation. Coastal and aquatic ecosystems are especially vulnerable due to concentrated human activities, with PAH persistence disrupting microbial communities, inhibiting plant growth, and altering ecosystem functions, potentially leading to biodiversity loss. In plants, PAH contamination manifests as a form of abiotic stress, inducing oxidative stress, cellular damage, and growth inhibition. Plants respond by activating antioxidant defenses and stress-related pathways. A notable aspect of plant defense mechanisms involves plant-derived extracellular vesicles (PDEVs), which are membrane-bound nanoparticles released by plant cells. These PDEVs play a crucial role in enhancing plant resistance to PAHs by facilitating intercellular communication and coordinating defense responses. The interaction between PAHs and PDEVs, while not fully elucidated, suggests a complex interplay of cellular defense mechanisms. PDEVs may contribute to PAH detoxification through pollutant sequestration or by delivering enzymes capable of PAH degradation. Studying PDEVs provides valuable insights into plant stress resilience mechanisms and offers potential new strategies for mitigating PAH-induced stress in plants and ecosystems.

Predicting the bioavailability of polycyclic aromatic hydrocarbons in rhizosphere soil using a new novel in situ solid-phase microextraction technique

In situ measurement of the bioavailability of organic pollutants in soil is crucial for understanding their environmental behavior and assessing health risks. Due to the high heterogeneity of soil, microscale determination is crucial for achieving high accuracy, but few methods are available. In this study, microsized probes coated with polydimethylsiloxane (PDMS) were used to measure the bioavailability of polycyclic aromatic hydrocarbons (PAHs) in soil in situ. The concentrations of PAHs enriched by the PDMS-coated probes correlated well with the results of bioassays using earthworms (R2 = 0.92-0.99) and ryegrass roots (R2 = 0.92-0.99). Compared with other chemical extraction methods, such as n-butanol extraction, the proposed method has advantages such as in situ operation, microvolume analysis, and negligible interference to the soil environment. In the soil rhizosphere zone, PAHs bioavailability decreased in the following order: rhizosphere > near-rhizosphere > far-rhizosphere. The bioavailability of PAHs in soil amended with biochar was also successfully characterized by the proposed method. Thus, this study developed an in situ and microscale method to predict the bioavailability of organic pollutants in contaminated soils and provides new insight into migration and transformation processes in rhizosphere soil.

Phenanthrene metabolism in Panicum miliaceum: anatomical adaptations, degradation pathway, and computational analysis of a dioxygenase enzyme

Polycyclic aromatic compounds (PAHs) are persistent organic pollutants of environmental concern due to their potential impacts on food chain, with plants being particularly vulnerable. While plants can uptake, transport, and transform PAHs, the precise mechanisms underlying their localization and degradation are not fully understood. Here, a cultivation experiment conducted with Panicum miliaceum exposed different concentrations of phenanthrene (PHE). Intermediate PHE degradation compounds were identified via GC-MS analysis, leading to the proposal of a phytodegradation pathway featuring three significant benzene ring cleavage steps. Our results showed that P. miliaceum exhibited the ability to effectively degrade high levels of PHE, resulting in the production of various intermediate products through several chemical changes. Examination of the localization and anatomical characteristics revealed structural alterations linked to PHE stress, with an observed enhancement in PHE accumulation density in both roots and shoots as treatment levels increased. Following a 2-week aging period, a decrease in the amount of PHE accumulation was observed, along with a change in its localization. Bioinformatics analysis of the P. miliaceum 2-oxoglutarate-dependent dioxygenase (2-ODD) DAO-like protein revealed a 299 amino acid structure with two highly conserved domains, namely 2OG-FeII_Oxy and DIOX_N. Molecular docking analysis aligned with experimental results, strongly affirming the potential link and direct action of 2-ODD DAO-like protein with PHE. Our study highlights P. miliaceum capacity for PAHs degradation and elucidates the mechanisms behind enhanced degradation efficiency. By integrating experimental evidence with bioinformatics analysis, we offer valuable insights into the potential applications of plant-based remediation strategies for PAHs-contaminated environments.

Polycyclic aromatic hydrocarbon (PAH) phytoaccumulation in urban areas by Platanus × acerifolia, Celtis australis, and Tilia grandifolia leaves and branches

Polycyclic aromatic hydrocarbon (PAH) concentrations in the leaves and 1-year-old branches of three common tree species growing in a middle-sized city located in a moderate climate zone were estimated. For this purpose, PAH phytoaccumulation in Platanus × acerifolia, Celtis australis, and Tilia grandifolia species from highly urbanized, traffic congested, and highly PAH-contaminated streets was compared with trees from non-contaminated parks in the same urban core. The gathered data was used to define 17 PAH profiles, identify the main PAH pollution emission sources, and determine the organ and species specificity of PAHs accumulation. Due to the direct absorption of polluted air via stomata, the leaves accumulated up to 30% more PAHs compared to the 1-year-old branches. As expected, PAH concentrations were much higher in street trees, while heavy weight PAHs (with five and six rings) were accumulated in the highest concentrations. The highest foliar Σ17 PAH concentrations were detected in street-grown C. australis, followed by P. acerifolia and T. grandifolia (502.68, 488.45, and 339.47 ng g-1 dry weight (DW), respectively). The same pattern was noted for Σ17 PAHs in branches (414.89, 327.58, and 342.99 ng g-1 DW, respectively). Thus, T. grandifolia emerged as the least effective PAH sink as it accumulated up to ~ 40% less PAHs than P. acerifolia and C. australis leaves/branches. Among the 17 tracked PAHs, benzo[a]anthracene, benzo[a]pyrene, dibenzo[a,h]anthracene, and pyrene were found to have accumulated in the highest concentrations in all analyzed species irrespective of the site, and accounted for more than 50% of the total detected PAHs. Finally, a "black box" about species and organ specificity, as well as specific drivers that limit PAHs uptake capacity by trees, was opened, while this work provides insights into further PAH phytoremediation strategies.