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Chen L, Wei B, Huang X, Yang L, Luo R, Zheng C, Wang Y. Catechol crosslinked bioprosthetic valves derived from caffeic acid and dopamine-conjugated porcine pericardia exhibit enhanced antithrombotic, immunomodulatory and anticalcification performance. Acta Biomater 2025:S1742-7061(25)00307-1. [PMID: 40316124 DOI: 10.1016/j.actbio.2025.04.054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Revised: 04/07/2025] [Accepted: 04/28/2025] [Indexed: 05/04/2025]
Abstract
The global aging population has led to an increasing prevalence of valvular heart disease (VHD), and the clinical application of bioprosthetic heart valves (BHVs) are growing with the advancement of transcatheter heart valve replacement surgery. However, BHVs, as allogenic pericardial tissue crosslinked with glutaraldehyde, have been affected by suboptimal cytocompatibility, thrombosis, immune response, and calcification, leading to premature degeneration and failure. Herein, a catechol-crosslinking strategy for BHVs was developed by conjugating porcine pericardia (PP) with catechols and subsequently coupling the grafted catechols to achieve the crosslinking and stabilization of BHVs. Caffeic acid and dopamine were exploited to conjugate the bioactive catechols on PP through amide condensation, and the catechols were further coupled under oxidation to impart the PP with enhanced stability and cytocompatibility as well as comparable mechanical properties to those of glutaraldehyde crosslinked PP (GLUT-PP). With the enrichment of catechols, the crosslinked PP not only demonstrated improved hydrophilicity to resist the blood components adhesion and thrombosis, but also enhanced the performance of endothelialization and antioxidation. Furthermore, the introduced catechols exhibits favorable anti-inflammatory properties, which significantly ameliorated the foreign body response and regulated the local immune responses of crosslinked PP. In conclusion, the catechol crosslinked PP is expected to be explored as a potential substitute for GLUT-PP to extend the lifespan of BHVs. STATEMENT OF SIGNIFICANCE: Bioprosthetic heart valves (BHVs) are mainly prepared from glutaraldehyde crosslinked porcine or bovine pericardia (GLUT-PP), which are currently affected by cytotoxicity, thrombosis, calcification, and immunoinflammatory responses, which would accelerate degeneration and failure of BHVs. In this study, we developed a catechol crosslinking strategy for BHVs and engineered caffeic acid and dopamine-conjugated porcine pericardia (PP). In summary, catechol crosslinked porcine pericardia demonstrated enhanced collagen stability, antithrombosis, endothelialization, anticalcification and immunomodulation which reduced the risk of structural degeneration, suggesting that the catechol crosslinked porcine pericardia could serve as a potential alternative to GLUT-PP.
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Affiliation(s)
- Lepeng Chen
- National Engineering Research Center for Biomaterials, Sichuan University, China
| | - Bangquan Wei
- National Engineering Research Center for Biomaterials, Sichuan University, China
| | - Xueyu Huang
- National Engineering Research Center for Biomaterials, Sichuan University, China
| | - Li Yang
- National Engineering Research Center for Biomaterials, Sichuan University, China
| | - Rifang Luo
- National Engineering Research Center for Biomaterials, Sichuan University, China
| | - Cheng Zheng
- National Engineering Research Center for Biomaterials, Sichuan University, China.
| | - Yunbing Wang
- National Engineering Research Center for Biomaterials, Sichuan University, China; Research Unit of Minimally Invasive Treatment of Structural Heart Disease, Chinese Academy of Medical Sciences (No: 2021RU013).
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2
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Sirocchi LS, Scharnweber M, Oberndorfer S, Siszler G, Zak KM, Rumpel K, Neumüller RA, Wilding B. Discovery of Carbodiimide Warheads to Selectively and Covalently Target Aspartic Acid in KRAS G12D. J Am Chem Soc 2025. [PMID: 40267480 DOI: 10.1021/jacs.5c03562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2025]
Abstract
Targeted covalent inhibitors are known to be successful therapeutics used in various indications. Covalent drugs typically target cysteine, as cysteine is well suited due to its high nucleophilicity. However, its low abundance in protein binding sites represents a major limitation. As a result, there is a need to covalently target additional nucleophilic amino acids. Recent literature has reported covalent inhibitors labeling aspartic acid in KRASG12D. However, these compounds also covalently bind to KRASG12C, indicating their cross-reactivity to cysteine along with aspartic acid. We report here carbodiimides as a novel reactive group to selectively target aspartic acid. Covalent inhibitors bearing a carbodiimide moiety are shown to covalently label KRASG12D in biochemical and cellular assays. A high-resolution X-ray crystal structure was obtained, which illustrates the mechanism of the covalent bond formation with KRASG12D. Carbodiimide warheads show selectivity toward KRASG12D over other KRAS alleles and represent a new covalent warhead suitable for covalently binding to aspartic acid in a biochemical and cellular context.
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Affiliation(s)
- Ludovica S Sirocchi
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Maximilian Scharnweber
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Sarah Oberndorfer
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Gabriella Siszler
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Krzysztof M Zak
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Klaus Rumpel
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Ralph A Neumüller
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
| | - Birgit Wilding
- Boehringer Ingelheim RCV GmbH & Co KG, Dr.-Boehringer-Gasse 5-11, Vienna A-1121, Austria
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3
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Hattori T, Ishiguro T, Yamamoto H. Triphenyl Phosphite-Mediated One-Pot Peptide-Bond Formation under Neutral Reaction Conditions. Org Lett 2025; 27:3742-3746. [PMID: 40162780 DOI: 10.1021/acs.orglett.5c00904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Liquid-phase peptide synthesis requires an excessive amount of strong C-terminal-activating reagents under acidic or basic conditions. Although the reaction proceeds well, it is accompanied by epimerization and other side reactions with active reagents, necessitating stepwise purification. Herein, we present an efficient peptide bond formation using P(OPh)3, which yields the corresponding peptides in high yield, and diastereopurity. In addition, this atom-economical method under neutral conditions minimizes side reactions and facilitates seamless one-pot oligopeptide synthesis.
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Affiliation(s)
- Tomohiro Hattori
- Peptide Research Center, Chubu University, 1200 Matsumoto-cho, Kasugai, Aichi 487-8501, Japan
| | - Tomomi Ishiguro
- Peptide Research Center, Chubu University, 1200 Matsumoto-cho, Kasugai, Aichi 487-8501, Japan
| | - Hisashi Yamamoto
- Peptide Research Center, Chubu University, 1200 Matsumoto-cho, Kasugai, Aichi 487-8501, Japan
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4
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Chen L, Li C, Wang H, Li J, Song S. HFIP-Promoted Aromatic Electrophilic Amidation of Indoles and Pyrroles with Isocyanates. J Org Chem 2025; 90:4271-4276. [PMID: 40106811 DOI: 10.1021/acs.joc.4c03176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2025]
Abstract
A mild and practical method for synthesizing amidoindoles and amidopyrroles was described via the direct amidation of indoles or pyrroles with isocyanates promoted by 1,1,1,3,3,3-hexafluoroisopropanol (HFIP). In this reaction, HFIP acted as a strong hydrogen bond-donating solvent to activate isocyanates, enabling the amidation of electron-rich nitrogen-containing heterocycles.
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Affiliation(s)
- Lei Chen
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd. 38, Beijing 100191, China
| | - Chao Li
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd. 38, Beijing 100191, China
| | - Hongye Wang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd. 38, Beijing 100191, China
| | - Jiaxing Li
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd. 38, Beijing 100191, China
| | - Song Song
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd. 38, Beijing 100191, China
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5
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Li S, Xu X, Chen J, Luo Y, Xia Y. Visible-Light-Promoted α-C(sp 3)-H Amidation of Cyclic Ethers under Redox-Neutral Conditions. Org Lett 2025; 27:2863-2867. [PMID: 40091216 DOI: 10.1021/acs.orglett.5c00337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2025]
Abstract
Reported herein is a visible-light-promoted strategy for the α-C(sp3)-H amidation of cyclic ethers using N-acyloxyamide as an oxidative amidating reagent. This transformation provides a straightforward approach to various α-amidated cyclic ethers under metal- and additive-free conditions. The synthetic utility of the products was demonstrated through facile transformations, including reduction, allylation, acylation, sulfonamidation, and gram-scale reactions. Preliminary mechanistic studies suggest a radical/radical cross-coupling process, with C(sp3)-H bond cleavage identified as the rate-determining step.
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Affiliation(s)
- Shuangqing Li
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Xianru Xu
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Jianhui Chen
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Yanshu Luo
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
| | - Yuanzhi Xia
- College of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, China
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6
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Iwasawa H, Takahashi N, Shimada N. Synthesis of N-methyl secondary amides via diboronic acid anhydride-catalyzed dehydrative condensation of carboxylic acids with aqueous methylamine. Org Biomol Chem 2025; 23:2400-2410. [PMID: 39912522 DOI: 10.1039/d4ob02022g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2025]
Abstract
In this study, we present the first catalytic methodology for synthesizing N-methyl secondary amides via dehydrative condensation of hydroxycarboxylic acids with readily available and safe aqueous methylamine, employing diboronic acid anhydride (DBAA) as the catalyst. DBAA catalysis can also be applied to direct amidations using aqueous ethylamine or aqueous dimethylamine. Moreover, we demonstrate the applicability of this catalytic system for the concise synthesis of eight biologically active compounds containing β-amino alcohol motifs, including halostachine, synephrine, longimammine, phenylephrine, metanephrine, normacromerine, etilefrine, and macromerine.
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Affiliation(s)
- Hinata Iwasawa
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, 3-25-40 Sakurajosui, Setagaya-ku, Tokyo 156-8550, Japan.
| | - Naoya Takahashi
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, 5-9-1 Shirokane, Minatao-ku, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, 3-25-40 Sakurajosui, Setagaya-ku, Tokyo 156-8550, Japan.
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7
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Gavit AV, Talekar SS, Mane MV, Sawant DN. Aryl Borane as a Catalyst for Dehydrative Amide Synthesis. J Org Chem 2025. [PMID: 39883055 DOI: 10.1021/acs.joc.4c02652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2025]
Abstract
Tris(pentafluorophenyl)borane B(C6F5)3·H2O is reported as a catalyst for dehydrative amidation of carboxylic acids and amines. This protocol is applicable across a wide range of >35 substrates, including aromatic and aliphatic amines and acids, resulting in amides in ≤92% yields. The scalability of the reaction up to 10 mmol, along with the synthesis of drugs such as ibuprofen amide, moclobemide, and phenacetin, demonstrates the industrial potential of our protocol.
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Affiliation(s)
- Amit Vinayak Gavit
- CatOM Lab, Organic Chemistry Division, CSIR-National Chemical Laboratory, Pune 411008, Maharashtra, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Sanjana S Talekar
- Centre for Nano and Material Sciences, Jain Global Campus, JAIN (Deemed-to-be University), Bangalore 562112, Karnataka, India
| | - Manoj V Mane
- Centre for Nano and Material Sciences, Jain Global Campus, JAIN (Deemed-to-be University), Bangalore 562112, Karnataka, India
| | - Dinesh Nanaji Sawant
- CatOM Lab, Organic Chemistry Division, CSIR-National Chemical Laboratory, Pune 411008, Maharashtra, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
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8
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Mizushima G, Fujita H, Kunishima M. Development of a Triazinyluronium-Based Dehydrative Condensing Reagent with No Heteroatomic Bonds. J Org Chem 2024; 89:18660-18664. [PMID: 39626268 DOI: 10.1021/acs.joc.4c02075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2024]
Abstract
A triazinyluronium-based dehydrative condensing reagent, 2-(4,6-dimethoxy-1,3,5-triazin-2-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (DMT-TU), has been developed. Unlike commonly used guanidinium- and uronium-based reagents, DMT-TU does not contain high-energy N-N and N-O bonds, reducing its explosivity, as suggested by differential scanning calorimetry. Using DMT-TU in the presence of iPr2EtN at room temperature, carboxylic acids and amines were effectively converted to their corresponding amides. Additionally, peptide bond formation with DMT-TU exhibited suppressed racemization ratios.
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Affiliation(s)
- Gaku Mizushima
- Faculty of Pharmaceutical Sciences, Institute of Medical, Pharmaceutical, and Health Sciences, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Hikaru Fujita
- Faculty of Pharmaceutical Sciences, Institute of Medical, Pharmaceutical, and Health Sciences, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Munetaka Kunishima
- Faculty of Pharmaceutical Sciences, Institute of Medical, Pharmaceutical, and Health Sciences, Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
- Faculty of Pharmaceutical Sciences, Kobe Gakuin University, 1-1-3 Minatojima, Chuo-ku, Kobe, Hyogo 650-8586, Japan
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9
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Zucchi A, Mattiello S, Maschio R, Bellotti V, Giovenzana GB, Lattuada L, Beverina L. Enabling amidation in water: micellar catalysis approach for sustainable synthesis of iopamidol. RSC Adv 2024; 14:39902-39907. [PMID: 39697252 PMCID: PMC11654718 DOI: 10.1039/d4ra08529a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2024] [Accepted: 12/10/2024] [Indexed: 12/20/2024] Open
Abstract
Micellar catalysis is becoming an increasingly versatile tool to carry out a wide range of organic transformations using water as the reaction medium. The approach was recently found to be effective also in the case of water sensitive organics such as acyl chlorides. This finding is of great relevance for the manufacturing of challenging substrates such as the known iodinated contrast agent iopamidol, requiring the use of aprotic dipolar solvents (DMF, NMP, DMAc) in the key amidation step of an acyl dichloride intermediate with serinol. These solvents are subjected to an increasing regulatory pressure due to safety and environmental concerns. We show that the amidation step can be straightforwardly performed in water containing the industrial surfactant Triton X-100, provided that the employed amine is not water soluble. Accordingly, we developed suitable lipophilic serinol derivatives that, after amidation and hydrolysis, directly gave iopamidol in a one-pot process.
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Affiliation(s)
- Anita Zucchi
- Department of Materials Science, University of Milano Bicocca Via R.Cozzi 55 Milano I-20125 Italy
| | - Sara Mattiello
- Department of Materials Science, University of Milano Bicocca Via R.Cozzi 55 Milano I-20125 Italy
| | - Rachele Maschio
- Università del Piemonte Orientale, Dipartimento di Scienze del Farmaco Largo Donegani 2/3 Novara 28100 (NO) Italy
| | - Valentina Bellotti
- Department of Materials Science, University of Milano Bicocca Via R.Cozzi 55 Milano I-20125 Italy
| | - Giovanni B Giovenzana
- Università del Piemonte Orientale, Dipartimento di Scienze del Farmaco Largo Donegani 2/3 Novara 28100 (NO) Italy
| | | | - Luca Beverina
- Department of Materials Science, University of Milano Bicocca Via R.Cozzi 55 Milano I-20125 Italy
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10
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Koyama A, Kuranaga T, Suo T, Morimoto R, Matsumoto T, Kakeya H. Twisted Amide-Mediated Peptide Synthesis. Chemistry 2024; 30:e202403288. [PMID: 39333757 DOI: 10.1002/chem.202403288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Revised: 09/25/2024] [Accepted: 09/26/2024] [Indexed: 09/30/2024]
Abstract
A robust, practical, and sustainable isomerization-suppressed peptide bond formation via acyl sulfonamide, a twisted amide, is disclosed. Tosyl isocyanate and pentafluorobenzyl bromide were applied in combination to activate the peptide C-terminus, which then reacted with an amine to yield an elongated peptide with high stereochemical purity. Careful analysis of NMR spectra of the active intermediate revealed the presence of an intramolecular hydrogen bond, suggesting that the hydrogen bond suppressed Cα-epimerization during amidation. The isomerization suppression by the intramolecular hydrogen bond is expected to be effective even under high dilution conditions, making the present method a powerful tool for the synthesis of complex macrocyclic peptides. In addition to peptide synthesis, the developed synthetic entry to twisted amides can be applied to the investigation of transition metal-catalyzed N-C bond activation. Moreover, the application to the N-C bond activation returned insight into peptide synthesis, leading to the use of sulfonamide as a protecting group of carboxylic acid that can be orthogonally removed in the presence of other conventional protecting groups.
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Grants
- 17H06401, 19H02840, 22H04901, 23H04882, 24H00493 Ministry of Education, Culture, Sports, Science, and Technology, Japan
- 22K05112 Ministry of Education, Culture, Sports, Science, and Technology, Japan
- 24ama221540h0001, 24ama121034j0003 Japan Agency for Medical Research and Development
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Affiliation(s)
- Ai Koyama
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Takefumi Kuranaga
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Taiki Suo
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Ryota Morimoto
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Takumi Matsumoto
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
| | - Hideaki Kakeya
- Department of System Chemotherapy and Molecular Sciences, Division of Medicinal Frontier Sciences, Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto, 606-8501, Japan
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11
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Zheng Y, Li J, Qi C, Wu W, Jiang H. Base-Promoted Aminoamidation of Cinnamoyl Chlorides with Aryl Amines: Access to β-Amino Amides. J Org Chem 2024; 89:15289-15301. [PMID: 39365964 DOI: 10.1021/acs.joc.4c01010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/06/2024]
Abstract
Herein, a base-promoted strategy for the synthesis of β-amino acids derivatives from α,β-unsaturated acyl chlorides derivatives and aryl amines has been described. In the presence of triethylamine, a tandem Michael addition and nucleophilic substitution progress was generated. The current method features readily available raw materials, mild reaction conditions, high atom economy, and wide tolerance for the coupling partners.
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Affiliation(s)
- Yongpeng Zheng
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510641, China
| | - Jianxiao Li
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510641, China
| | - Chaorong Qi
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510641, China
| | - Wanqing Wu
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510641, China
| | - Huanfeng Jiang
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510641, China
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12
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Koshizuka M, Takahashi N, Shimada N. Organoboron catalysis for direct amide/peptide bond formation. Chem Commun (Camb) 2024; 60:11202-11222. [PMID: 39196535 DOI: 10.1039/d4cc02994a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/29/2024]
Abstract
Amides and peptides are ubiquitous functional groups found in several natural and artificial materials, and they are essential for the advancement of life and material sciences. In particular, their relevance in clinical medicine and drug discovery has increased in recent years. Dehydrative condensation of readily available carboxylic acids with amines is the most "direct" method for amide synthesis; however, this methodology generally requires a stoichiometric amount of condensation agent (coupling reagent). Catalytic direct dehydrative amidation has become an "ideal" methodology for synthesizing amides from the perspective of green chemistry, with water as the only byproduct in principle, high atom efficiency, environmentally friendly, energy saving, and safety. Conversely, organoboron compounds, such as boronic acids, which are widely used in various industries as coupling reagents for Suzuki-Miyaura cross-coupling reactions or pharmaceutical structures, are environmentally friendly molecules that have low toxicity and are easy to handle. Based on the chemical properties of organoboron compounds, they have potential Lewis acidity and the ability to form reversible covalent bonds with dehydration, making them attractive as catalysts. This review explores studies on the development of direct dehydrative amide/peptide bond formation reactions from carboxylic acids using organoboron catalysis, classifying them based on chemical bonding and catalysis over approximately 25 years, from the early developmental days to 2023.
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Affiliation(s)
- Masayoshi Koshizuka
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, 5-9-1 Shirokane, Minatao-ku, Tokyo 108-8641, Japan
| | - Naoya Takahashi
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, 5-9-1 Shirokane, Minatao-ku, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, 3-25-40 Sakurajosui, Setagaya-ku, Tokyo 156-8550, Japan.
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13
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Castagna D, Gourdet B, Hjerpe R, MacFaul P, Novak A, Revol G, Rochette E, Jordan A. To homeostasis and beyond! Recent advances in the medicinal chemistry of heterobifunctional derivatives. PROGRESS IN MEDICINAL CHEMISTRY 2024; 63:61-160. [PMID: 39370242 DOI: 10.1016/bs.pmch.2024.07.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/08/2024]
Abstract
The field of induced proximity therapeutics has expanded dramatically over the past 3 years, and heterobifunctional derivatives continue to form a significant component of the activities in this field. Here, we review recent advances in the field from the perspective of the medicinal chemist, with a particular focus upon informative case studies, alongside a review of emerging topics such as Direct-To-Biology (D2B) methodology and utilities for heterobifunctional compounds beyond E3 ligase mediated degradation. We also include a critical evaluation of the latest thinking around the optimisation of physicochemical and pharmacokinetic attributes of these beyond Role of Five molecules, to deliver appropriate therapeutic exposure in vivo.
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Affiliation(s)
| | | | | | | | | | | | | | - Allan Jordan
- Sygnature Discovery, Nottingham, United Kingdom; Sygnature Discovery, Macclesfield, United Kingdom.
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14
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Zeng Y, Li Q, Zhang R, Wei M, Zhao X, Hao L, Zhang H, Wang Z, Guo X, Ai L. Development and application of a sensitive liquid chromatography-tandem mass spectrometry method for the quantitative analysis of 11 free fatty acids in human serum using a derivatisation strategy. J Chromatogr A 2024; 1728:465019. [PMID: 38810573 DOI: 10.1016/j.chroma.2024.465019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 05/12/2024] [Accepted: 05/22/2024] [Indexed: 05/31/2024]
Abstract
A stable isotope dilution-liquid chromatography-tandem mass spectrometry method based on a derivatisation strategy involving an N,N'-carbonylimidazole solution (CDI) with 4-(dimethylamino)-benzenemethanamine was developed for the determination of 11 free fatty acids (FFAs) in human blood samples. Serum samples were subjected to liquid‒liquid extraction and centrifuged, and the supernatant was collected for a two-step derivatisation reaction with a CDI and 4-(dimethylamino)-aniline acetonitrile solution. The derivatised solution was separated on a ACQUITY UPLC HSS T3 column (2.1 × 50 mm, 1.8 µm) column with a mobile phase consisting of water-acetonitrile in gradient elution and then detected by tandem mass spectrometry using electrospray ionisation (ESI) and multiple reaction monitoring (MRM) in positive ion mode and quantified using the isotope internal standard method. The effects of the derivatisation reaction time, temperature and concentration of derivatisation reagents on the response values of the analytes were investigated. The optimal conditions were as follows: 1.0 mg mL-1 CDI acetonitrile solution at 25 °C for 25 min, followed by a reaction with a 1.0 mg mL-1 4-(dimethylamino)-benzenemethanamine acetonitrile solution at 70 °C for 30 min. Under the optimal conditions, the limits of detection (LODs) of the 11 FFAs were in the range of 3.0-14.0 ng mL-1; the limits of quantification (LOQs) were in the range of 8.0-45.0 ng mL-1; and the mean recoveries ranged from 83.4 to 112.8%, with intraday and interday precisions ranging from 0.7 to 9.1% and 3.7-9.5%, respectively. The experimental method is simple in terms of the pretreatment operation, accurate and reliable, and can be applied to the sensitive determination of FFAs in human blood samples.
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Affiliation(s)
- Yongfu Zeng
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Qian Li
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Ruoyu Zhang
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Maolin Wei
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Xiaochan Zhao
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Liping Hao
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Haoran Zhang
- Hebei Qianye Biotechnology Co, Shijiazhuang 050000, China
| | - Ziqing Wang
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China
| | - Xiujuan Guo
- Hebei Medical University Fourth Hospital, Shijiazhuang 050011, China.
| | - Lianfeng Ai
- School of Public Health, Hebei Medical University, Shijiazhuang 050017, China; Shijiazhuang Customs Technology Center, Shijiazhuang 050051, China.
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15
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Chen TH, Ando A, Shamoto O, Fuse S. Effect of Brønsted Acids on the Activation of Mixed Anhydride/Mixed Carbonic Anhydride and C-Terminal-Free N-Methylated Peptide Synthesis in a Micro-Flow Reactor. Chemistry 2024; 30:e202401402. [PMID: 38719730 DOI: 10.1002/chem.202401402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Indexed: 06/19/2024]
Abstract
Amidations employing mixed (carbonic) anhydrides have long been favoured in peptide synthesis because of their cost-effectiveness and less waste generation. Despite their long history, no study has compared the effects of additives on the activation of mixed anhydrides and carbonic anhydrides. In this study, we investigated the amidation of mixed (carbonic) anhydride in the presence of a base and/or Brønsted acids. The use of NMI⋅HCl significantly improved the conversion of the mixed carbonic anhydride, while expediting nucleophilic attacks on the desired carbonyl group. In contrast, in the case of mixed anhydrides, neither the conversion nor the desired nucleophilic attack improved significantly. We developed a C-terminus-free N-methylated peptide synthesis method using mixed carbonic anhydrides in a micro-flow reactor. Fourteen N-alkylated peptides were synthesized in moderate to high yields (55-99 %) without severe racemization (<1 %). Additionally, a significant enhancement in the amidation between mixed carbonic anhydrides and bis-TMS-protected N-methyl amino acids with the inclusion of NMI⋅HCl was observed for the first time. In addition, we observed unexpected C-terminal epimerization of the C-terminus-free N-methyl peptides.
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Affiliation(s)
- Ting-Ho Chen
- Department of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan
| | - Akira Ando
- Department of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan
| | - Otoka Shamoto
- Department of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan
| | - Shinichiro Fuse
- Department of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan
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16
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Henry M, Minty L, Kwok ACW, Elwood JML, Foulis AJ, Pettinger J, Jamieson C. One-Pot Oxidative Amidation of Aldehydes via the Generation of Nitrile Imine Intermediates. J Org Chem 2024; 89:7913-7926. [PMID: 38778786 PMCID: PMC11165588 DOI: 10.1021/acs.joc.4c00575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 04/22/2024] [Accepted: 05/16/2024] [Indexed: 05/25/2024]
Abstract
A one-pot procedure for the oxidative amidation of aldehydes via the in situ generation of reactive nitrile imine (NI) intermediates has been developed. Distinct from our progenitor processes, mechanistic and control experiments revealed that the NI undergoes rapid oxidation to an acyl diazene species, which then facilitates N-acylation of an amine. A range of substrates have been explored, including application in the synthesis of pharmaceutically relevant compounds.
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Affiliation(s)
- Martyn
C. Henry
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
| | - Laura Minty
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
| | - Alexander C. W. Kwok
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
| | - Jessica M. L. Elwood
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
| | - Adam J. Foulis
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
| | - Jonathan Pettinger
- GSK,
Medicines Research Centre, Gunnels Wood Road, Stevenage SG1 2NY, United Kingdom
| | - Craig Jamieson
- Department
of Pure and Applied Chemistry, University
of Strathclyde, Glasgow G1 1XL, United
Kingdom
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17
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Schneider J, Häring AP, Waldvogel SR. Electrochemical Dehydration of Dicarboxylic Acids to Their Cyclic Anhydrides. Chemistry 2024; 30:e202400403. [PMID: 38527230 DOI: 10.1002/chem.202400403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 03/24/2024] [Accepted: 03/25/2024] [Indexed: 03/27/2024]
Abstract
An intramolecular electrochemical dehydration reaction of dicarboxylic acids to their cyclic anhydrides is presented. This electrolysis allows dicarboxylic acids as naturally abundant, inexpensive, safe, and readily available starting materials to be transformed into carboxylic anhydrides under mild reaction conditions. No conventional dehydration reagent is required. The obtained cyclic anhydrides are highly valuable reagents in organic synthesis, and in this report, we use them in-situ for acylation reactions of amines to synthesize amides. This work is part of the recent progress in electrochemical dehydration, which - in contrast to electrochemical dehydrogenative reactions for example - is an underexplored field of research. The reaction mechanism was investigated by 18O isotope labeling, revealing the formation of sulfate by electrochemical oxidation and hydrolysis of the thiocyanate-supporting electrolyte. This transformation is not a classical Kolbe electrolysis, because it is non-decarboxylative, and all carbon atoms of the carboxylic acid starting material are contained in the carboxylic anhydride. In total, 20 examples are shown with NMR yields up to 71 %.
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Affiliation(s)
- Johannes Schneider
- Department of Chemistry, Johannes Gutenberg University, Duesbergweg 10-14, 55128, Mainz, Germany
| | - Andreas P Häring
- Department of Chemistry, Johannes Gutenberg University, Duesbergweg 10-14, 55128, Mainz, Germany
| | - Siegfried R Waldvogel
- Department of Chemistry, Johannes Gutenberg University, Duesbergweg 10-14, 55128, Mainz, Germany
- Karlsruhe Institut für Technologie, Kaiserstraße 12, 76131, Karlsruhe, Germany
- Max-Planck-Institute for Chemical Energy Conversion (MPI CEC), Stiftstraße 34-36, 45470, Mülheim an der Ruhr, Germany
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18
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Neeliveettil A, Dey S, Nomula V, Thakur S, Giri D, Santra A, Sau A. Deoxyfluorinated amidation and esterification of carboxylic acid by pyridinesulfonyl fluoride. Chem Commun (Camb) 2024; 60:4789-4792. [PMID: 38602165 DOI: 10.1039/d4cc00877d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/12/2024]
Abstract
Amide bond synthesis is one of the most used reactions in medicinal chemistry. We report an amide bond formation reaction through deoxyfluorinated carboxylic acids under mild conditions using 2-pyridinesulfonyl fluoride. The reaction procedure has been used in a one-pot synthesis of amides and esters via in situ generation of acyl fluoride. This one-pot synthetic method provides easy access to amides and esters. Using this method, we have sequentially synthesized a tetrapeptide and calceolarioside-B glycoside derivative with good yields.
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Affiliation(s)
- Anootha Neeliveettil
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.
- Academic of scientific Innovation Research (AcSIR), Ghaziabad, 201002, India
| | - Soumyadip Dey
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, 502284, Sangareddy, Telangana, India
| | - Vishnu Nomula
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.
- Academic of scientific Innovation Research (AcSIR), Ghaziabad, 201002, India
| | - Swati Thakur
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, 502284, Sangareddy, Telangana, India
| | - Debabrata Giri
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, 502284, Sangareddy, Telangana, India
| | - Abhishek Santra
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.
- Academic of scientific Innovation Research (AcSIR), Ghaziabad, 201002, India
| | - Abhijit Sau
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi, 502284, Sangareddy, Telangana, India
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19
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Kekessie I, Wegner K, Martinez I, Kopach ME, White TD, Tom JK, Kenworthy MN, Gallou F, Lopez J, Koenig SG, Payne PR, Eissler S, Arumugam B, Li C, Mukherjee S, Isidro-Llobet A, Ludemann-Hombourger O, Richardson P, Kittelmann J, Sejer Pedersen D, van den Bos LJ. Process Mass Intensity (PMI): A Holistic Analysis of Current Peptide Manufacturing Processes Informs Sustainability in Peptide Synthesis. J Org Chem 2024; 89:4261-4282. [PMID: 38508870 PMCID: PMC11002941 DOI: 10.1021/acs.joc.3c01494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 01/17/2024] [Accepted: 03/01/2024] [Indexed: 03/22/2024]
Abstract
Small molecule therapeutics represent the majority of the FDA-approved drugs. Yet, many attractive targets are poorly tractable by small molecules, generating a need for new therapeutic modalities. Due to their biocompatibility profile and structural versatility, peptide-based therapeutics are a possible solution. Additionally, in the past two decades, advances in peptide design, delivery, formulation, and devices have occurred, making therapeutic peptides an attractive modality. However, peptide manufacturing is often limited to solid-phase peptide synthesis (SPPS), liquid phase peptide synthesis (LPPS), and to a lesser extent hybrid SPPS/LPPS, with SPPS emerging as a predominant platform technology for peptide synthesis. SPPS involves the use of excess solvents and reagents which negatively impact the environment, thus highlighting the need for newer technologies to reduce the environmental footprint. Herein, fourteen American Chemical Society Green Chemistry Institute Pharmaceutical Roundtable (ACS GCIPR) member companies with peptide-based therapeutics in their portfolio have compiled Process Mass Intensity (PMI) metrics to help inform the sustainability efforts in peptide synthesis. This includes PMI assessment on 40 synthetic peptide processes at various development stages in pharma, classified according to the development phase. This is the most comprehensive assessment of synthetic peptide environmental metrics to date. The synthetic peptide manufacturing process was divided into stages (synthesis, purification, isolation) to determine their respective PMI. On average, solid-phase peptide synthesis (SPPS) (PMI ≈ 13,000) does not compare favorably with other modalities such as small molecules (PMI median 168-308) and biopharmaceuticals (PMI ≈ 8300). Thus, the high PMI for peptide synthesis warrants more environmentally friendly processes in peptide manufacturing.
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Affiliation(s)
- Ivy Kekessie
- Early Discovery
Biochemistry - Peptide Therapeutics, Genentech,
Inc., A Member of the Roche Group, 1 DNA Way, South San Francisco, California 94080, United States
| | - Katarzyna Wegner
- Active Pharmaceutical
Ingredient Development, Ipsen Manufacturing
Ireland Ltd., Blanchardstown
Industrial Park, Dublin 15, Ireland
| | - Isamir Martinez
- Green Chemistry
Institute, American Chemical Society, 1155 16th St North West, Washington, District of Columbia, 20036, United
States
| | - Michael E. Kopach
- Synthetic
Molecule Design and Development, Eli Lilly
and Company, Indianapolis, Indiana 46285, United States
| | - Timothy D. White
- Synthetic
Molecule Design and Development, Eli Lilly
and Company, Indianapolis, Indiana 46285, United States
| | - Janine K. Tom
- Drug Substance
Technologies, Amgen, Inc., 1 Amgen Center Drive, Thousand
Oaks, California 91320, United States
| | - Martin N. Kenworthy
- Chemical
Development, Pharmaceutical Technology & Development, Operations, AstraZeneca, Macclesfield, SK10 2NA, United Kingdom
| | - Fabrice Gallou
- Chemical
& Analytical Development, Novartis Pharma
AG, 4056 Basel, Switzerland
| | - John Lopez
- Chemical
& Analytical Development, Novartis Pharma
AG, 4056 Basel, Switzerland
| | - Stefan G. Koenig
- Small
Molecule
Pharmaceutical Sciences, Genentech, Inc.,
A Member of the Roche Group, 1 DNA Way, South San Francisco, California 94080, United States
| | - Philippa R. Payne
- Outsourced
Manufacturing, Pharmaceutical Development & Manufacturing, Gilead Alberta ULC, 1021 Hayter Rd NW, Edmonton, T6S 1A1, Canada
| | - Stefan Eissler
- Bachem
AG, Hauptstrasse 144, 4416 Bubendorf, Switzerland
| | - Balasubramanian Arumugam
- Chemical
Macromolecule Division, Asymchem Life Science
(Tianjin) Co., Ltd., 71 Seventh Avenue, TEDA Tianjin 300457, China
| | - Changfeng Li
- Chemical
Macromolecule Division, Asymchem Life Science
(Tianjin) Co., Ltd., 71 Seventh Avenue, TEDA Tianjin 300457, China
| | - Subha Mukherjee
- Chemical
Process Development, Bristol Myers Squibb, New Brunswick, New Jersey 08903, United States
| | | | | | - Paul Richardson
- Chemistry, Pfizer, 10578 Science Center Drive (CB6), San Diego, California 09121, United States
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20
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Alawaed AA, Ramachandran PV. TiF 4-catalyzed direct amidation of carboxylic acids and amino acids with amines. Org Biomol Chem 2024; 22:1915-1919. [PMID: 38353662 DOI: 10.1039/d3ob01943h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/29/2024]
Abstract
Unlike other metal fluorides, catalytic titanium tetrafluoride enhances the direct amidation of aromatic and aliphatic carboxylic acids and N-protected amino acids in refluxing toluene. While aromatic acids were converted to amides with 10 mol% of the catalyst within 24 h, aliphatic acids underwent a faster reaction (12 h), with lower catalyst loading (5 mol%). This protocol is equally efficient with alkyl and aryl amines providing a variety of carboxamides and peptides in 60-99% yields.
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21
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Redfern LR. Quantification of residual organic bases in an active pharmaceutical ingredient using mixed-mode chromatography and UV detection. J Chromatogr A 2024; 1717:464658. [PMID: 38278131 DOI: 10.1016/j.chroma.2024.464658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 01/04/2024] [Accepted: 01/13/2024] [Indexed: 01/28/2024]
Abstract
The use of organic bases is ubiquitous in chemical synthesis, yet quantifying these compounds with traditional HPLC methodologies is often hampered by poor peak shape, low retention, and limited UV absorption. When employed in the manufacture of an active pharmaceutical ingredient (API), these compounds must be controlled to levels that are safe for human consumption, requiring robust analytical methods with sufficiently low quantification limits. This work describes the development of an HPLC method for the quantification of imidazole and 1,8-Diazabicyclo[5.4.0]undec‑7-ene (DBU) in an API using mixed-mode chromatography. Through control of the pH and organic modifier gradients, the retention of the basic analytes and API can be tuned independently to achieve desirable retention and sensitivity for each compound. The resulting HPLC method exhibits good performance in linearity, accuracy, sensitivity, specificity, and solution stability. Notably, these conditions avoid more complex detection modalities, such as mass spectrometry, while maintaining a system pressure below 400 bar, making the method compatible with a broad range of instruments. This approach to mixed-mode chromatography method development could be extended to different organic bases in the presence of complex molecules to fit the needs of projects in an academic or industrial environment.
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Affiliation(s)
- Louis R Redfern
- Analytical Research and Development, Small Molecule CMC Development, AbbVie, Inc., 1 North Waukegan Road, North Chicago, IL 60064, USA.
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22
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Wang JY, Stevens JM, Kariofillis SK, Tom MJ, Golden DL, Li J, Tabora JE, Parasram M, Shields BJ, Primer DN, Hao B, Del Valle D, DiSomma S, Furman A, Zipp GG, Melnikov S, Paulson J, Doyle AG. Identifying general reaction conditions by bandit optimization. Nature 2024; 626:1025-1033. [PMID: 38418912 DOI: 10.1038/s41586-024-07021-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 01/03/2024] [Indexed: 03/02/2024]
Abstract
Reaction conditions that are generally applicable to a wide variety of substrates are highly desired, especially in the pharmaceutical and chemical industries1-6. Although many approaches are available to evaluate the general applicability of developed conditions, a universal approach to efficiently discover these conditions during optimizations is rare. Here we report the design, implementation and application of reinforcement learning bandit optimization models7-10 to identify generally applicable conditions by efficient condition sampling and evaluation of experimental feedback. Performance benchmarking on existing datasets statistically showed high accuracies for identifying general conditions, with up to 31% improvement over baselines that mimic state-of-the-art optimization approaches. A palladium-catalysed imidazole C-H arylation reaction, an aniline amide coupling reaction and a phenol alkylation reaction were investigated experimentally to evaluate use cases and functionalities of the bandit optimization model in practice. In all three cases, the reaction conditions that were most generally applicable yet not well studied for the respective reaction were identified after surveying less than 15% of the expert-designed reaction space.
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Affiliation(s)
- Jason Y Wang
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
| | - Jason M Stevens
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
| | - Stavros K Kariofillis
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
- Department of Chemistry, Columbia University, New York, NY, USA
| | - Mai-Jan Tom
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
| | - Dung L Golden
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
| | - Jun Li
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Jose E Tabora
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Marvin Parasram
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry, New York University, New York, NY, USA
| | - Benjamin J Shields
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Molecular Structure and Design, Bristol Myers Squibb, Cambridge, MA, USA
| | - David N Primer
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
- Loxo Oncology at Lilly, Louisville, CO, USA
| | - Bo Hao
- Janssen Research and Development, Spring House, PA, USA
| | - David Del Valle
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Stacey DiSomma
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Ariel Furman
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - G Greg Zipp
- Discovery Synthesis, Bristol Myers Squibb, Princeton, NJ, USA
| | | | - James Paulson
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Abigail G Doyle
- Department of Chemistry, Princeton University, Princeton, NJ, USA.
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.
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23
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Persaud KE, Sahu RR, Neary MC, Kapdi AR, Lakshman MK. Two short approaches to the COVID-19 drug β-D- N4-hydroxycytidine and its prodrug molnupiravir. Org Biomol Chem 2024; 22:735-740. [PMID: 38168802 DOI: 10.1039/d3ob02039h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Molnupiravir, the prodrug for β-D-N4-hydroxycytidine (NHC), is marketed by Merck as Lagevrio™ against mild-moderate COVID-19, under FDA emergency use authorization. It is the first oral drug against the disease. This work describes two synthetic approaches to NHC and molnupiravir by amide activation in uridine with a peptide-coupling agent and with a 4-chloropyrimidinone nucleoside intermediate.
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Affiliation(s)
- Kevin E Persaud
- Department of Chemistry and Biochemistry, The City College of New York, 160 Convent Avenue, New York, NY 10031, USA.
| | - Rajesh R Sahu
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai 400019, India
| | - Michelle C Neary
- Department of Chemistry, Hunter College, 695 Park Avenue, New York, NY 10065, USA
| | - Anant R Kapdi
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai 400019, India
| | - Mahesh K Lakshman
- Department of Chemistry and Biochemistry, The City College of New York, 160 Convent Avenue, New York, NY 10031, USA.
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24
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Ramachandran PV, Singh A, Walker H, Hamann HJ. Borane-Pyridine: An Efficient Catalyst for Direct Amidation. Molecules 2024; 29:268. [PMID: 38202849 PMCID: PMC10780903 DOI: 10.3390/molecules29010268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Revised: 12/21/2023] [Accepted: 12/26/2023] [Indexed: 01/12/2024] Open
Abstract
Borane-pyridine acts as an efficient (5 mol%) liquid catalyst, providing improved solubility for the direct amidation of a wide range of aromatic and aliphatic carboxylic acids and amines to form secondary and tertiary carboxamides. Tolerance of potentially incompatible halo, nitro, and alkene functionalities has been demonstrated.
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25
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Patil P, Zheng Q, Kurpiewska K, Dömling A. The isocyanide S N2 reaction. Nat Commun 2023; 14:5807. [PMID: 37726293 PMCID: PMC10509164 DOI: 10.1038/s41467-023-41253-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2023] [Accepted: 08/28/2023] [Indexed: 09/21/2023] Open
Abstract
The SN2 nucleophilic substitution reaction is a vital organic transformation used for drug and natural product synthesis. Nucleophiles like cyanide, oxygen, nitrogen, sulfur, or phosphorous replace halogens or sulfonyl esters, forming new bonds. Isocyanides exhibit unique C-centered lone pair σ and π* orbitals, enabling diverse radical and multicomponent reactions. Despite this, their nucleophilic potential in SN2 reactions remains unexplored. We have uncovered that isocyanides act as versatile nucleophiles in SN2 reactions with alkyl halides. This yields highly substituted secondary amides through in situ nitrilium ion hydrolysis introducing an alternative bond break compared to classical amide synthesis. This novel 3-component process accommodates various isocyanide and electrophile structures, functional groups, scalability, late-stage drug modifications, and complex compound synthesis. This reaction greatly expands chemical diversity, nearly doubling the classical amid coupling's chemical space. Notably, the isocyanide nucleophile presents an unconventional Umpolung amide carbanion synthon (R-NHC(-) = O), an alternative to classical amide couplings.
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Affiliation(s)
- Pravin Patil
- Institute of Molecular and Translational Medicine, Faculty of Medicine and Dentistry and Czech Advanced Technology and Research Institute, Palackӯ University in Olomouc, Olomouc, Czech Republic
- Department of Drug Design, University of Groningen, Groningen, The Netherlands
| | - Qiang Zheng
- Department of Drug Design, University of Groningen, Groningen, The Netherlands
| | - Katarzyna Kurpiewska
- Department of Crystal Chemistry and Crystal Physics Faculty of Chemistry, Jagiellonian University, 30-387, Kraków, Poland
| | - Alexander Dömling
- Institute of Molecular and Translational Medicine, Faculty of Medicine and Dentistry and Czech Advanced Technology and Research Institute, Palackӯ University in Olomouc, Olomouc, Czech Republic.
- Department of Drug Design, University of Groningen, Groningen, The Netherlands.
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26
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Orsy G, Shahmohammadi S, Forró E. A Sustainable Green Enzymatic Method for Amide Bond Formation. Molecules 2023; 28:5706. [PMID: 37570676 PMCID: PMC10419938 DOI: 10.3390/molecules28155706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 06/24/2023] [Accepted: 07/26/2023] [Indexed: 08/13/2023] Open
Abstract
A sustainable enzymatic strategy for the preparation of amides by using Candida antarctica lipase B as the biocatalyst and cyclopentyl methyl ether as a green and safe solvent was devised. The method is simple and efficient and it produces amides with excellent conversions and yields without the need for intensive purification steps. The scope of the reaction was extended to the preparation of 28 diverse amides using four different free carboxylic acids and seven primary and secondary amines, including cyclic amines. This enzymatic methodology has the potential to become a green and industrially reliable process for direct amide synthesis.
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Affiliation(s)
- György Orsy
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary; (G.O.); (S.S.)
| | - Sayeh Shahmohammadi
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary; (G.O.); (S.S.)
- Stereochemistry Research Group, Eötvös Loránd Research Network, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary
| | - Enikő Forró
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary; (G.O.); (S.S.)
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27
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Freiberg KM, Kavthe RD, Thomas RM, Fialho DM, Dee P, Scurria M, Lipshutz BH. Direct formation of amide/peptide bonds from carboxylic acids: no traditional coupling reagents, 1-pot, and green. Chem Sci 2023; 14:3462-3469. [PMID: 37006678 PMCID: PMC10055766 DOI: 10.1039/d3sc00198a] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Accepted: 02/27/2023] [Indexed: 03/06/2023] Open
Abstract
Technology for generating especially important amide and peptide bonds from carboxylic acids and amines that avoids traditional coupling reagents is described. The 1-pot processes developed rely on thioester formation, neat, using a simple dithiocarbamate, and are safe and green, and rely on Nature-inspired thioesters that are then converted to the targeted functionality.
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Affiliation(s)
- Kaitlyn M Freiberg
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - Rahul D Kavthe
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - Rohan M Thomas
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - David M Fialho
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - Paris Dee
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - Matthew Scurria
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
| | - Bruce H Lipshutz
- Department of Chemistry and Biochemistry, University of California Santa Barbara CA 93106 USA
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28
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Lavayssiere M, Lamaty F. Amidation by reactive extrusion for the synthesis of active pharmaceutical ingredients teriflunomide and moclobemide. Chem Commun (Camb) 2023; 59:3439-3442. [PMID: 36857661 DOI: 10.1039/d2cc06934b] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Abstract
The solventless synthesis of an amide was performed in a twin-screw extruder in the presence of a coupling agent, providing a high yielding and productive method. The reaction conditions were optimized to prepare APIs, teriflunomide and moclobemide.
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29
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Fujii T, Matsuda Y, Seki T, Shikida N, Iwai Y, Ooba Y, Takahashi K, Isokawa M, Kawaguchi S, Hatada N, Watanabe T, Takasugi R, Nakayama A, Shimbo K, Mendelsohn BA, Okuzumi T, Yamada K. AJICAP Second Generation: Improved Chemical Site-Specific Conjugation Technology for Antibody-Drug Conjugate Production. Bioconjug Chem 2023. [PMID: 36894324 PMCID: PMC10119932 DOI: 10.1021/acs.bioconjchem.3c00040] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/11/2023]
Abstract
The site-directed chemical conjugation of antibodies remains an area of great interest and active efforts within the antibody-drug conjugate (ADC) community. We previously reported a unique site modification using a class of immunoglobulin-G (IgG) Fc-affinity reagents to establish a versatile, streamlined, and site-selective conjugation of native antibodies to enhance the therapeutic index of the resultant ADCs. This methodology, termed "AJICAP", successfully modified Lys248 of native antibodies to produce site-specific ADC with a wider therapeutic index than the Food and Drug Administration-approved ADC, Kadcyla. However, the long reaction sequences, including the reduction-oxidation (redox) treatment, increased the aggregation level. In this manuscript, we aimed to present an updated Fc-affinity-mediated site-specific conjugation technology named "AJICAP second generation" without redox treatment utilizing a "one-pot" antibody modification reaction. The stability of Fc affinity reagents was improved owing to structural optimization, enabling the production of various ADCs without aggregation. In addition to Lys248 conjugation, Lys288 conjugated ADCs with homogeneous drug-to-antibody ratio of 2 were produced using different Fc affinity peptide reagent possessing a proper spacer linkage. These two conjugation technologies were used to produce over 20 ADCs from several combinations of antibodies and drug linkers. The in vivo profile of Lys248 and Lys288 conjugated ADCs was also compared. Furthermore, nontraditional ADC production, such as antibody-protein conjugates and antibody-oligonucleotide conjugates, were achieved. These results strongly indicate that this Fc affinity conjugation approach is a promising strategy for manufacturing site-specific antibody conjugates without antibody engineering.
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Affiliation(s)
- Tomohiro Fujii
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Yutaka Matsuda
- Ajinomoto Bio-Pharma Services, 11040 Roselle Street, San Diego, California 92121, United States
| | - Takuya Seki
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Natsuki Shikida
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Yusuke Iwai
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Yuri Ooba
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Kazutoshi Takahashi
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Muneki Isokawa
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Sayaka Kawaguchi
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Noriko Hatada
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Tomohiro Watanabe
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Rika Takasugi
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Akira Nakayama
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Kazutaka Shimbo
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Brian A Mendelsohn
- Ajinomoto Bio-Pharma Services, 11040 Roselle Street, San Diego, California 92121, United States
| | - Tatsuya Okuzumi
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
| | - Kei Yamada
- Ajinomoto Co., Inc., 1-1, Suzuki-Cho, Kawasaki-Ku, Kawasaki-Shi, Kanagawa 210-8681, Japan
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30
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N-Amidation of Nitrogen-Containing Heterocyclic Compounds: Can We Apply Enzymatic Tools? Bioengineering (Basel) 2023; 10:bioengineering10020222. [PMID: 36829716 PMCID: PMC9951958 DOI: 10.3390/bioengineering10020222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 01/20/2023] [Accepted: 01/31/2023] [Indexed: 02/10/2023] Open
Abstract
Amide bond is often seen in value-added nitrogen-containing heterocyclic compounds, which can present promising chemical, biological, and pharmaceutical significance. However, current synthesis methods in the preparation of amide-containing N-heterocyclic compounds have low specificity (large amount of by-products) and efficiency. In this study, we focused on reviewing the feasible enzymes (nitrogen acetyltransferase, carboxylic acid reductase, lipase, and cutinase) for the amidation of N-heterocyclic compounds; summarizing their advantages and weakness in the specific applications; and further predicting candidate enzymes through in silico structure-functional analysis. For future prospects, current enzymes demand further engineering and improving for practical industrial applications and more enzymatic tools need to be explored and developed for a broader range of N-heterocyclic substrates.
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31
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Sustainable amidation through acceptorless dehydrogenative coupling by pincer-type catalysts: recent advances. PURE APPL CHEM 2023. [DOI: 10.1515/pac-2022-1101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Abstract
The amide functional group is ubiquitous in living organisms, and is of particular importance in bioactive compounds and pharmaceuticals. Because of the prevalence and significance of the amide bond, considerable efforts have been invested throughout the years in developing new synthetic methodologies for its formation. Nevertheless, amide synthesis still largely relies on variants of the traditional condensation of carboxylic acids and amines, mediated by stoichiometric coupling reagents. This poses a sustainability challenge, since such reactions suffer from unfavorable atom and step economies, involve harmful chemicals and produce chemical waste. Hence, establishing sustainable approaches to amide synthesis is of great importance. Over the last two decades, we have developed homogeneous catalytic reactions for sustainable synthetic transformations, primarily based on transition metal complexes of pincer ligands. A considerable portion of these efforts has been devoted to acceptorless dehydrogenative coupling, including that of alcohols and amines through ruthenium-catalyzed reactions. These latter processes generate amides without resorting to coupling reagents and typically produce no waste, with their only byproduct being H2 gas, which is itself a valuable resource. In the present review, we chronicle our progress in this area of research since 2014. This includes the use of water and ammonia as amidation reagents, expanding the scope of amidation substrates and target amides, achieving milder reaction conditions, development of amidation-based liquid organic hydrogen carrier systems, and introduction of manganese-based catalysts.
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32
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Felten S, He CQ, Weisel M, Shevlin M, Emmert MH. Accessing Diverse Azole Carboxylic Acid Building Blocks via Mild C–H Carboxylation: Parallel, One-Pot Amide Couplings and Machine-Learning-Guided Substrate Scope Design. J Am Chem Soc 2022; 144:23115-23126. [DOI: 10.1021/jacs.2c10557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Stephanie Felten
- Process Research & Development, MRL, Merck & Co. Inc, 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Cyndi Qixin He
- Computational and Structural Chemistry, MRL, Merck & Co. Inc, 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Mark Weisel
- Process Research & Development, MRL, Merck & Co. Inc, 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Michael Shevlin
- Process Research & Development, MRL, Merck & Co. Inc, 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Marion H. Emmert
- Process Research & Development, MRL, Merck & Co. Inc, 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
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33
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Caravez JC, Iyer KS, Kavthe RD, Kincaid JRA, Lipshutz BH. A 1-Pot Synthesis of the SARS-CoV-2 M pro Inhibitor Nirmatrelvir, the Key Ingredient in Paxlovid. Org Lett 2022; 24:9049-9053. [DOI: 10.1021/acs.orglett.2c03683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Juan C. Caravez
- Department of Chemistry & Biochemistry, University of California, Santa Barbara, Santa Barbara, California 93106, United States
| | - Karthik S. Iyer
- Department of Chemistry & Biochemistry, University of California, Santa Barbara, Santa Barbara, California 93106, United States
| | - Rahul D. Kavthe
- Department of Chemistry & Biochemistry, University of California, Santa Barbara, Santa Barbara, California 93106, United States
| | - Joseph R. A. Kincaid
- Department of Chemistry & Biochemistry, University of California, Santa Barbara, Santa Barbara, California 93106, United States
| | - Bruce H. Lipshutz
- Department of Chemistry & Biochemistry, University of California, Santa Barbara, Santa Barbara, California 93106, United States
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34
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Abrams JN. Design, Synthesis, and In Vitro Mitotic Evaluation of 3‐Amino‐Isoquinolinones as Anticancer Agents. ChemistrySelect 2022. [DOI: 10.1002/slct.202202861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Jason N. Abrams
- Department of Chemistry Texas A&M University Kingsville 700 University Blvd Kingsville TX 78363
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35
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Comito M, Monguzzi R, Tagliapietra S, Palmisano G, Cravotto G. Cefonicid Benzathine Salt: A Convenient, Lean, and High-Performance Protocol to Make an Old Cephalosporin Shine. Antibiotics (Basel) 2022; 11:antibiotics11081095. [PMID: 36009964 PMCID: PMC9404797 DOI: 10.3390/antibiotics11081095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 08/03/2022] [Accepted: 08/10/2022] [Indexed: 11/16/2022] Open
Abstract
Cefonicid is a second-generation cephalosporin sold under the brand name Sintocef™. It is an injectable drug obtained via a freeze-drying process and is also available for oral preparations. The high-quality standard required is very challenging to satisfy, and current production protocols are characterized by steps that are lengthy and cumbersome, making the product unattractive for the international market. Industrial R&D is constantly working on the process optimization for API synthesis, with the aim of increasing productivity and decreasing production costs and waste. We herein report a new and efficient method for the synthesis of the cefonicid benzathine salt that provides a good yield and high product stability. The double-nucleophilic and lipophilic nature of N',N″-dibenzylethylene diacetate enables the deformylation of the OH-protected group on the mandelic moiety and also enables product crystallization to occur. We demonstrate that the formyl group in the peculiar position has high reactivity, promoting an amidation reaction that deprotects a hydroxy group and generates a new C-N bond in the reaction by-product. Several amines and OH-protected groups have been studied, but none were able to replicate the excellent results of benzathine diacetate.
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Affiliation(s)
- Marziale Comito
- Dipartimento di Scienza e Tecnologia del Farmaco, University of Turin, Via Pietro Giuria 9, 10125 Turin, Italy
- Research and Development, ACS Dobfar SpA, Via Paullo 9, 20067 Tribiano, Italy
| | - Riccardo Monguzzi
- Research and Development, ACS Dobfar SpA, Via Paullo 9, 20067 Tribiano, Italy
| | - Silvia Tagliapietra
- Dipartimento di Scienza e Tecnologia del Farmaco, University of Turin, Via Pietro Giuria 9, 10125 Turin, Italy
| | - Giovanni Palmisano
- Dipartimento di Scienza e Alta Tecnologia, University of Insubria, Via Valleggio 9, 22100 Como, Italy
| | - Giancarlo Cravotto
- Dipartimento di Scienza e Tecnologia del Farmaco, University of Turin, Via Pietro Giuria 9, 10125 Turin, Italy
- Correspondence: ; Tel.: +39-011-6707183
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36
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An efficient and convenient method to prepare amides by the carbonylation of amines. Tetrahedron Lett 2022. [DOI: 10.1016/j.tetlet.2022.154104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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