1
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Bednářová E, Grotjahn R, Lin C, Xie KA, Karube Y, Owen JS, Joe CL, Lainhart BC, Sherwood TC, Rovis T. From Structure to Function: Designing Iridium Catalysts with Spin-Forbidden Excitation for Low-Energy Light-Driven Reactions. J Am Chem Soc 2025; 147:12511-12522. [PMID: 40194056 DOI: 10.1021/jacs.4c17584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2025]
Abstract
Herein we describe a comprehensive study of ligand effects on optoelectronic properties of a series of Ir(III) catalysts which undergo formally spin-forbidden excitation using low-energy light. We demonstrate that electronic and steric tuning of several variables can be explained by their impact on the HOMO and LUMO energies of the complex. Density functional theory calculations of the catalysts' adiabatic triplet energies agree with the experimental results to within 0.05 eV on average. As many of these subtle effects are independent of each other, the merger of them in a single complex tends to have an additive effect and we thus succeeded in developing a family of highly oxidizing iridium photocatalysts that operate by spin-forbidden excitation.
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Affiliation(s)
- Eva Bednářová
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Robin Grotjahn
- Department of Chemistry, University of California, Irvine, Irvine, California 92697, United States
- Department of Chemistry & Biochemistry, Santa Clara University, Santa Clara, California 95053, United States
| | - Chenxi Lin
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Katherine A Xie
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Yuzuka Karube
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Jonathan S Owen
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Candice L Joe
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, New Jersey 08903, United States
| | - Brendan C Lainhart
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, New Jersey 08903, United States
| | - Trevor C Sherwood
- Discovery and Development Sciences, Bristol Myers Squibb, Princeton, New Jersey 08543, United States
| | - Tomislav Rovis
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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2
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Velasco PQ, Hippalgaonkar K, Ramalingam B. Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning. Beilstein J Org Chem 2025; 21:10-38. [PMID: 39811684 PMCID: PMC11730176 DOI: 10.3762/bjoc.21.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Accepted: 11/26/2024] [Indexed: 01/16/2025] Open
Abstract
The discovery of the optimal conditions for chemical reactions is a labor-intensive, time-consuming task that requires exploring a high-dimensional parametric space. Historically, the optimization of chemical reactions has been performed by manual experimentation guided by human intuition and through the design of experiments where reaction variables are modified one at a time to find the optimal conditions for a specific reaction outcome. Recently, a paradigm change in chemical reaction optimization has been enabled by advances in lab automation and the introduction of machine learning algorithms. Therein, multiple reaction variables can be synchronously optimized to obtain the optimal reaction conditions, requiring a shorter experimentation time and minimal human intervention. Herein, we review the currently used state-of-the-art high-throughput automated chemical reaction platforms and machine learning algorithms that drive the optimization of chemical reactions, highlighting the limitations and future opportunities of this new field of research.
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Affiliation(s)
- Pablo Quijano Velasco
- Institute of Materials Research and Engineering (IMRE), Agency for Science Technology and Research (A*STAR), 2 Fusionopolis Way, Singapore 138634, Republic of Singapore
| | - Kedar Hippalgaonkar
- Institute of Materials Research and Engineering (IMRE), Agency for Science Technology and Research (A*STAR), 2 Fusionopolis Way, Singapore 138634, Republic of Singapore
- Department of Materials Science and Engineering, Nanyang Technological University, Singapore 639798, Republic of Singapore
- Institute for Functional Intelligent Materials, National University of Singapore, 4 Science Drive 2, Singapore 117544, Republic of Singapore
| | - Balamurugan Ramalingam
- Institute of Materials Research and Engineering (IMRE), Agency for Science Technology and Research (A*STAR), 2 Fusionopolis Way, Singapore 138634, Republic of Singapore
- Institute of Sustainability for Chemicals, Energy and Environment (ISCE2), Agency for Science Technology and Research (A*STAR), 1 Pesek Road, Jurong Island, Singapore 627833, Republic of Singapore
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3
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Nsouli R, Nayak S, Balakrishnan V, Lin JY, Chi BK, Ford HG, Tran AV, Guzei IA, Bacsa J, Armada NR, Zenov F, Weix DJ, Ackerman-Biegasiewicz LKG. Decarboxylative Cross-Coupling Enabled by Fe and Ni Metallaphotoredox Catalysis. J Am Chem Soc 2024; 146:29551-29559. [PMID: 39422549 PMCID: PMC11528444 DOI: 10.1021/jacs.4c09621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2024] [Revised: 09/11/2024] [Accepted: 09/12/2024] [Indexed: 10/19/2024]
Abstract
Decarboxylative cross-coupling of carboxylic acids and aryl halides has become a key transformation in organic synthesis to form C(sp2)-C(sp3) bonds. In this report, a base metal pairing between Fe and Ni has been developed with complementary reactivity to the well-established Ir and Ni metallaphotoredox reactions. Utilizing an inexpensive FeCl3 cocatalyst along with a pyridine carboxamidine Ni catalyst, a range of aryl iodides can be preferentially coupled to carboxylic acids over boronic acid esters, triflates, chlorides, and even bromides in high yields. Additionally, carboxylic acid derivatives containing heterocycles, N-protected amino acids, and protic functionality can be coupled in 23-96% yield with a range of sterically hindered, electron-rich, and electron-deficient aryl iodides. Preliminary catalytic and stoichiometric reactions support a mechanism in which Fe is responsible for the activation of carboxylic acid upon irradiation with light and a NiI alkyl intermediate is responsible for activation of the aryl iodide coupling partner followed by reductive elimination to generate product.
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Affiliation(s)
- Reem Nsouli
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Sneha Nayak
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | | | - Jung-Ying Lin
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Benjamin K. Chi
- Department
of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53716, United States
| | - Hannah G. Ford
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Andrew V. Tran
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Ilia A. Guzei
- Department
of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53716, United States
| | - John Bacsa
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Nicholas R. Armada
- School
of Molecular Science, Arizona State University, Tempe, Arizona 85281, United States
| | - Fedor Zenov
- School
of Molecular Science, Arizona State University, Tempe, Arizona 85281, United States
| | - Daniel J. Weix
- Department
of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53716, United States
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4
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Xie KA, Bednarova E, Joe CL, Sherwood TC, Welin ER, Rovis T. A Unified Method for Oxidative and Reductive Decarboxylative Arylation with Orange Light-Driven Ir/Ni Metallaphotoredox Catalysis. J Am Chem Soc 2024; 146:25780-25787. [PMID: 39236338 DOI: 10.1021/jacs.4c08375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2024]
Abstract
Carboxylic acids and their derivatives are powerful building blocks in dual Ir/Ni metallaphotoredox methods of decarboxylative arylation due to their abundance as feedstock compounds. However, the library of accessible carboxylic acids is limited by trends in radical stability, often necessitating the development of specific systems for challenging substrates. Herein, we disclose the application of a new Ir(III) photocatalyst and low-energy orange light Ir/Ni metallaphotoredox system with broad applicability in activating both native carboxylic acids and redox-active esters (RAEs). This method represents the first known example of complementary oxidative and reductive decarboxylative paradigms with broadly similar reaction conditions, unlocking the reactivity for challenging substrates. We further show a wide scope of aryl halide and acid coupling partners in both regimes, with added advantages over blue-light-catalyzed aryl alkylation for photosensitive substrates.
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Affiliation(s)
- Katherine A Xie
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Eva Bednarova
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Candice L Joe
- Chemical Process Development, Bristol Myers Squibb, 1 Squibb Drive, New Brunswick, New Jersey 08903, United States
| | - Trevor C Sherwood
- Small Molecule Drug Discovery, Bristol Myers Squibb, Princeton, New Jersey 08543, United States
| | - Eric R Welin
- Small Molecule Drug Discovery, Bristol Myers Squibb, San Diego, California 92121, United States
| | - Tomislav Rovis
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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5
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Tom G, Schmid SP, Baird SG, Cao Y, Darvish K, Hao H, Lo S, Pablo-García S, Rajaonson EM, Skreta M, Yoshikawa N, Corapi S, Akkoc GD, Strieth-Kalthoff F, Seifrid M, Aspuru-Guzik A. Self-Driving Laboratories for Chemistry and Materials Science. Chem Rev 2024; 124:9633-9732. [PMID: 39137296 PMCID: PMC11363023 DOI: 10.1021/acs.chemrev.4c00055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/15/2024]
Abstract
Self-driving laboratories (SDLs) promise an accelerated application of the scientific method. Through the automation of experimental workflows, along with autonomous experimental planning, SDLs hold the potential to greatly accelerate research in chemistry and materials discovery. This review provides an in-depth analysis of the state-of-the-art in SDL technology, its applications across various scientific disciplines, and the potential implications for research and industry. This review additionally provides an overview of the enabling technologies for SDLs, including their hardware, software, and integration with laboratory infrastructure. Most importantly, this review explores the diverse range of scientific domains where SDLs have made significant contributions, from drug discovery and materials science to genomics and chemistry. We provide a comprehensive review of existing real-world examples of SDLs, their different levels of automation, and the challenges and limitations associated with each domain.
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Affiliation(s)
- Gary Tom
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
| | - Stefan P. Schmid
- Department
of Chemistry and Applied Biosciences, ETH
Zurich, Vladimir-Prelog-Weg 1, CH-8093 Zurich, Switzerland
| | - Sterling G. Baird
- Acceleration
Consortium, 80 St. George
St, Toronto, Ontario M5S 3H6, Canada
| | - Yang Cao
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Acceleration
Consortium, 80 St. George
St, Toronto, Ontario M5S 3H6, Canada
| | - Kourosh Darvish
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
- Acceleration
Consortium, 80 St. George
St, Toronto, Ontario M5S 3H6, Canada
| | - Han Hao
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Acceleration
Consortium, 80 St. George
St, Toronto, Ontario M5S 3H6, Canada
| | - Stanley Lo
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
| | - Sergio Pablo-García
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
| | - Ella M. Rajaonson
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
| | - Marta Skreta
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
| | - Naruki Yoshikawa
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
| | - Samantha Corapi
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
| | - Gun Deniz Akkoc
- Forschungszentrum
Jülich GmbH, Helmholtz Institute
for Renewable Energy Erlangen-Nürnberg, Cauerstr. 1, 91058 Erlangen, Germany
- Department
of Chemical and Biological Engineering, Friedrich-Alexander Universität Erlangen-Nürnberg, Egerlandstr. 3, 91058 Erlangen, Germany
| | - Felix Strieth-Kalthoff
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- School of
Mathematics and Natural Sciences, University
of Wuppertal, Gaußstraße
20, 42119 Wuppertal, Germany
| | - Martin Seifrid
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Department
of Materials Science and Engineering, North
Carolina State University, Raleigh, North Carolina 27695, United States of America
| | - Alán Aspuru-Guzik
- Department
of Chemistry, University of Toronto, 80 St. George St, Toronto, Ontario M5S 3H6, Canada
- Department
of Computer Science, University of Toronto, 40 St. George St, Toronto, Ontario M5S 2E4, Canada
- Vector Institute
for Artificial Intelligence, 661 University Ave Suite 710, Toronto, Ontario M5G 1M1, Canada
- Acceleration
Consortium, 80 St. George
St, Toronto, Ontario M5S 3H6, Canada
- Department
of Chemical Engineering & Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada
- Department
of Materials Science & Engineering, University of Toronto, Toronto, Ontario M5S 3E4, Canada
- Lebovic
Fellow, Canadian Institute for Advanced
Research (CIFAR), 661
University Ave, Toronto, Ontario M5G 1M1, Canada
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6
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Pijper B, Saavedra LM, Lanzi M, Alonso M, Fontana A, Serrano M, Gómez JE, Kleij AW, Alcázar J, Cañellas S. Addressing Reproducibility Challenges in High-Throughput Photochemistry. JACS AU 2024; 4:2585-2595. [PMID: 39055158 PMCID: PMC11267557 DOI: 10.1021/jacsau.4c00312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 05/21/2024] [Accepted: 06/13/2024] [Indexed: 07/27/2024]
Abstract
Light-mediated reactions have emerged as an indispensable tool in organic synthesis and drug discovery, enabling novel transformations and providing access to previously unexplored chemical space. Despite their widespread application in both academic and industrial research, the utilization of light as an energy source still encounters challenges regarding reproducibility and data robustness. Herein we present a comprehensive head-to-head comparison of commercially available batch photoreactors, alongside the introduction of the use of batch and flow photoreactors in parallel synthesis. Hence, we aim to establish a reliable and consistent platform for light-mediated reactions in high-throughput mode. Herein, we showcase the identification of several platforms aligning with the rigorous demands for efficient and robust high-throughput experimentation screenings and library synthesis.
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Affiliation(s)
- Brenda Pijper
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Lucía M. Saavedra
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Matteo Lanzi
- Institute
of Chemical Research of Catalonia (ICIQ), the Barcelona Institute
of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain
| | - Maialen Alonso
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Alberto Fontana
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Marta Serrano
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - José Enrique Gómez
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Arjan W. Kleij
- Institute
of Chemical Research of Catalonia (ICIQ), the Barcelona Institute
of Science and Technology, Av. Països Catalans 16, 43007 Tarragona, Spain
- Catalan
Institute of Research and Advanced Studies (ICREA), Pg. Lluís Companys 23, 08010 Barcelona, Spain
| | - Jesús Alcázar
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
| | - Santiago Cañellas
- Chemical
Capabilities, Analytical & Purification, Global Discovery Chemistry. Janssen-Cilag, S.A., E-45007 Toledo, Spain
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7
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Wagner F, Sagmeister P, Jusner CE, Tampone TG, Manee V, Buono FG, Williams JD, Kappe CO. A Slug Flow Platform with Multiple Process Analytics Facilitates Flexible Reaction Optimization. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2308034. [PMID: 38273711 PMCID: PMC10987115 DOI: 10.1002/advs.202308034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Revised: 12/21/2023] [Indexed: 01/27/2024]
Abstract
Flow processing offers many opportunities to optimize reactions in a rapid and automated manner, yet often requires relatively large quantities of input materials. To combat this, the use of a flexible slug flow reactor, equipped with two analytical instruments, for low-volume optimization experiments are reported. A Buchwald-Hartwig amination toward the drug olanzapine, with 6 independent optimizable variables, is optimized using three different automated approaches: self-optimization, design of experiments, and kinetic modeling. These approaches are complementary and provide differing information on the reaction: pareto optimal operating points, response surface models, and mechanistic models, respectively. The results are achieved using <10% of the material that would be required for standard flow operation. Finally, a chemometric model is built utilizing automated data handling and three subsequent validation experiments demonstrate good agreement between the slug flow reactor and a standard (larger scale) flow reactor.
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Affiliation(s)
- Florian Wagner
- Center for Continuous Flow Synthesis and Processing (CC FLOW)Research Center Pharmaceutical Engineering GmbH (RCPE)Inffeldgasse 13Graz8010Austria
- Institute of ChemistryUniversity of GrazNAWI Graz, Heinrichstrasse 28Graz8010Austria
| | - Peter Sagmeister
- Center for Continuous Flow Synthesis and Processing (CC FLOW)Research Center Pharmaceutical Engineering GmbH (RCPE)Inffeldgasse 13Graz8010Austria
- Institute of ChemistryUniversity of GrazNAWI Graz, Heinrichstrasse 28Graz8010Austria
| | - Clemens E. Jusner
- Center for Continuous Flow Synthesis and Processing (CC FLOW)Research Center Pharmaceutical Engineering GmbH (RCPE)Inffeldgasse 13Graz8010Austria
- Institute of ChemistryUniversity of GrazNAWI Graz, Heinrichstrasse 28Graz8010Austria
| | - Thomas G. Tampone
- Boehringer Ingelheim Pharmaceuticals, Inc900 Ridgebury RoadRidgefieldCT06877USA
| | - Vidhyadhar Manee
- Boehringer Ingelheim Pharmaceuticals, Inc900 Ridgebury RoadRidgefieldCT06877USA
| | - Frederic G. Buono
- Boehringer Ingelheim Pharmaceuticals, Inc900 Ridgebury RoadRidgefieldCT06877USA
| | - Jason D. Williams
- Center for Continuous Flow Synthesis and Processing (CC FLOW)Research Center Pharmaceutical Engineering GmbH (RCPE)Inffeldgasse 13Graz8010Austria
- Institute of ChemistryUniversity of GrazNAWI Graz, Heinrichstrasse 28Graz8010Austria
| | - C. Oliver Kappe
- Center for Continuous Flow Synthesis and Processing (CC FLOW)Research Center Pharmaceutical Engineering GmbH (RCPE)Inffeldgasse 13Graz8010Austria
- Institute of ChemistryUniversity of GrazNAWI Graz, Heinrichstrasse 28Graz8010Austria
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8
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Yu J, Liu J, Li C, Huang J, Zhu Y, You H. Recent advances and applications in high-throughput continuous flow. Chem Commun (Camb) 2024; 60:3217-3225. [PMID: 38436212 DOI: 10.1039/d3cc06180a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/05/2024]
Abstract
High-throughput continuous flow technology has emerged as a revolutionary approach in chemical synthesis, offering accelerated experimentation and improved efficiency. With the aid of process analytical technology and automation, this system not only enables rapid optimisation of reaction conditions at the millimole to the picomole scale, but also facilitates automated scale-up synthesis. It can even achieve the self-planning and self-synthesis of small drug molecules with artificial intelligence incorporated in the system. The versatility of the system is highlighted by its compatibility with both electrochemistry and photochemistry, and its significant applications in organic synthesis and drug discovery. This highlight summarises its recent developments and applications, emphasising its significant impact on advancing research across multiple disciplines.
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Affiliation(s)
- Jiaping Yu
- School of Science, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
| | - Jiaying Liu
- Institute of Advanced Technology of Heilongjiang Academy of Sciences, Harbin, 150000, China
| | - Chaoyi Li
- School of Science, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
| | - Junrong Huang
- School of Science, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
| | - Yuxiang Zhu
- School of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen, 518107, China.
| | - Hengzhi You
- School of Science, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China.
- Green Pharmaceutical Engineering Research Centre, Harbin Institute of Technology (Shenzhen), Shenzhen, 518055, China
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9
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Brocklehurst CE, Altmann E, Bon C, Davis H, Dunstan D, Ertl P, Ginsburg-Moraff C, Grob J, Gosling DJ, Lapointe G, Marziale AN, Mues H, Palmieri M, Racine S, Robinson RI, Springer C, Tan K, Ulmer W, Wyler R. MicroCycle: An Integrated and Automated Platform to Accelerate Drug Discovery. J Med Chem 2024; 67:2118-2128. [PMID: 38270627 DOI: 10.1021/acs.jmedchem.3c02029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2024]
Abstract
We herein describe the development and application of a modular technology platform which incorporates recent advances in plate-based microscale chemistry, automated purification, in situ quantification, and robotic liquid handling to enable rapid access to high-quality chemical matter already formatted for assays. In using microscale chemistry and thus consuming minimal chemical matter, the platform is not only efficient but also follows green chemistry principles. By reorienting existing high-throughput assay technology, the platform can generate a full package of relevant data on each set of compounds in every learning cycle. The multiparameter exploration of chemical and property space is hereby driven by active learning models. The enhanced compound optimization process is generating knowledge for drug discovery projects in a time frame never before possible.
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Affiliation(s)
- Cara E Brocklehurst
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Eva Altmann
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Corentin Bon
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Holly Davis
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - David Dunstan
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - Peter Ertl
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Carol Ginsburg-Moraff
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - Jonathan Grob
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - Daniel J Gosling
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Guillaume Lapointe
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Alexander N Marziale
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Heinrich Mues
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Marco Palmieri
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Sophie Racine
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
| | - Richard I Robinson
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - Clayton Springer
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - Kian Tan
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - William Ulmer
- Global Discovery Chemistry, Novartis Biomedical Research, Cambridge, Massachusetts 02139, United States
| | - René Wyler
- Global Discovery Chemistry, Novartis Biomedical Research, Novartis Pharma AG, Basel 4033, Switzerland
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10
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Wang JY, Stevens JM, Kariofillis SK, Tom MJ, Golden DL, Li J, Tabora JE, Parasram M, Shields BJ, Primer DN, Hao B, Del Valle D, DiSomma S, Furman A, Zipp GG, Melnikov S, Paulson J, Doyle AG. Identifying general reaction conditions by bandit optimization. Nature 2024; 626:1025-1033. [PMID: 38418912 DOI: 10.1038/s41586-024-07021-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 01/03/2024] [Indexed: 03/02/2024]
Abstract
Reaction conditions that are generally applicable to a wide variety of substrates are highly desired, especially in the pharmaceutical and chemical industries1-6. Although many approaches are available to evaluate the general applicability of developed conditions, a universal approach to efficiently discover these conditions during optimizations is rare. Here we report the design, implementation and application of reinforcement learning bandit optimization models7-10 to identify generally applicable conditions by efficient condition sampling and evaluation of experimental feedback. Performance benchmarking on existing datasets statistically showed high accuracies for identifying general conditions, with up to 31% improvement over baselines that mimic state-of-the-art optimization approaches. A palladium-catalysed imidazole C-H arylation reaction, an aniline amide coupling reaction and a phenol alkylation reaction were investigated experimentally to evaluate use cases and functionalities of the bandit optimization model in practice. In all three cases, the reaction conditions that were most generally applicable yet not well studied for the respective reaction were identified after surveying less than 15% of the expert-designed reaction space.
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Affiliation(s)
- Jason Y Wang
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
| | - Jason M Stevens
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
| | - Stavros K Kariofillis
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
- Department of Chemistry, Columbia University, New York, NY, USA
| | - Mai-Jan Tom
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA
| | - Dung L Golden
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
| | - Jun Li
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Jose E Tabora
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Marvin Parasram
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Department of Chemistry, New York University, New York, NY, USA
| | - Benjamin J Shields
- Department of Chemistry, Princeton University, Princeton, NJ, USA
- Molecular Structure and Design, Bristol Myers Squibb, Cambridge, MA, USA
| | - David N Primer
- Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA
- Loxo Oncology at Lilly, Louisville, CO, USA
| | - Bo Hao
- Janssen Research and Development, Spring House, PA, USA
| | - David Del Valle
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Stacey DiSomma
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Ariel Furman
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - G Greg Zipp
- Discovery Synthesis, Bristol Myers Squibb, Princeton, NJ, USA
| | | | - James Paulson
- Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA
| | - Abigail G Doyle
- Department of Chemistry, Princeton University, Princeton, NJ, USA.
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.
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11
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Slattery A, Wen Z, Tenblad P, Sanjosé-Orduna J, Pintossi D, den Hartog T, Noël T. Automated self-optimization, intensification, and scale-up of photocatalysis in flow. Science 2024; 383:eadj1817. [PMID: 38271529 DOI: 10.1126/science.adj1817] [Citation(s) in RCA: 31] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Accepted: 12/13/2023] [Indexed: 01/27/2024]
Abstract
The optimization, intensification, and scale-up of photochemical processes constitute a particular challenge in a manufacturing environment geared primarily toward thermal chemistry. In this work, we present a versatile flow-based robotic platform to address these challenges through the integration of readily available hardware and custom software. Our open-source platform combines a liquid handler, syringe pumps, a tunable continuous-flow photoreactor, inexpensive Internet of Things devices, and an in-line benchtop nuclear magnetic resonance spectrometer to enable automated, data-rich optimization with a closed-loop Bayesian optimization strategy. A user-friendly graphical interface allows chemists without programming or machine learning expertise to easily monitor, analyze, and improve photocatalytic reactions with respect to both continuous and discrete variables. The system's effectiveness was demonstrated by increasing overall reaction yields and improving space-time yields compared with those of previously reported processes.
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Affiliation(s)
- Aidan Slattery
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Zhenghui Wen
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Pauline Tenblad
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Jesús Sanjosé-Orduna
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Diego Pintossi
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Tim den Hartog
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
- Zuyd University of Applied Sciences, Nieuw Eyckholt 300, 6419 DJ Heerlen, Netherlands
- Netherlands Organisation for Applied Scientific Research (TNO), High Tech Campus 25, 5656 AE Eindhoven, Netherlands
| | - Timothy Noël
- Flow Chemistry Group, van 't Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
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12
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Eyke NS, Schneider TN, Jin B, Hart T, Monfette S, Hawkins JM, Morse PD, Howard RM, Pfisterer DM, Nandiwale KY, Jensen KF. Parallel multi-droplet platform for reaction kinetics and optimization. Chem Sci 2023; 14:8798-8809. [PMID: 37621435 PMCID: PMC10445457 DOI: 10.1039/d3sc02082g] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2023] [Accepted: 08/01/2023] [Indexed: 08/26/2023] Open
Abstract
We present an automated droplet reactor platform possessing parallel reactor channels and a scheduling algorithm that orchestrates all of the parallel hardware operations and ensures droplet integrity as well as overall efficiency. We design and incorporate all of the necessary hardware and software to enable the platform to be used to study both thermal and photochemical reactions. We incorporate a Bayesian optimization algorithm into the control software to enable reaction optimization over both categorical and continuous variables. We demonstrate the capabilities of both the preliminary single-channel and parallelized versions of the platform using a series of model thermal and photochemical reactions. We conduct a series of reaction optimization campaigns and demonstrate rapid acquisition of the data necessary to determine reaction kinetics. The platform is flexible in terms of use case: it can be used either to investigate reaction kinetics or to perform reaction optimization over a wide range of chemical domains.
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Affiliation(s)
- Natalie S Eyke
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Timo N Schneider
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Brooke Jin
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Travis Hart
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Sebastien Monfette
- Pfizer Worldwide Research and Development 445 Eastern Point Rd Groton CT 06340 USA
| | - Joel M Hawkins
- Pfizer Worldwide Research and Development 445 Eastern Point Rd Groton CT 06340 USA
| | - Peter D Morse
- Pfizer Worldwide Research and Development 445 Eastern Point Rd Groton CT 06340 USA
| | - Roger M Howard
- Pfizer Worldwide Research and Development 445 Eastern Point Rd Groton CT 06340 USA
| | - David M Pfisterer
- Pfizer Worldwide Research and Development 445 Eastern Point Rd Groton CT 06340 USA
| | | | - Klavs F Jensen
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA
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13
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Gesmundo NJ, Tu NP, Sarris KA, Wang Y. ChemBeads-Enabled Photoredox High-Throughput Experimentation Platform to Improve C(sp 2)-C(sp 3) Decarboxylative Couplings. ACS Med Chem Lett 2023; 14:521-529. [PMID: 37077401 PMCID: PMC10108395 DOI: 10.1021/acsmedchemlett.2c00538] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Accepted: 03/07/2023] [Indexed: 03/18/2023] Open
Abstract
Enthusiasm surrounding nickel/photoredox C(sp2)-C(sp3) cross-couplings is very high; however, these methods are sometimes challenged by complex drug-like substrates in discovery chemistry. In our hands this has been especially true of the decarboxylative coupling, which has lagged behind other photoredox couplings in internal adoption and success. Herein, the development of a photoredox high-throughput experimentation platform to optimize challenging C(sp2)-C(sp3) decarboxylative couplings is described. Chemical-coated glass beads (ChemBeads) and a novel parallel bead dispenser are used to expedite the high-throughput experimentation process and identify improved coupling conditions. In this report, photoredox high-throughput experimentation is utilized to dramatically improve low-yielding decarboxylative C(sp2)-C(sp3) couplings, and libraries, using conditions not previously identified in the literature.
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Affiliation(s)
- Nathan J. Gesmundo
- AbbVie, Inc., 1 North Waukegan Road, North
Chicago, Illinois 60064, United States
| | - Noah P. Tu
- AbbVie, Inc., 1 North Waukegan Road, North
Chicago, Illinois 60064, United States
| | - Kathy A. Sarris
- AbbVie, Inc., 1 North Waukegan Road, North
Chicago, Illinois 60064, United States
| | - Ying Wang
- AbbVie, Inc., 1 North Waukegan Road, North
Chicago, Illinois 60064, United States
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14
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Taylor CJ, Pomberger A, Felton KC, Grainger R, Barecka M, Chamberlain TW, Bourne RA, Johnson CN, Lapkin AA. A Brief Introduction to Chemical Reaction Optimization. Chem Rev 2023; 123:3089-3126. [PMID: 36820880 PMCID: PMC10037254 DOI: 10.1021/acs.chemrev.2c00798] [Citation(s) in RCA: 76] [Impact Index Per Article: 38.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Indexed: 02/24/2023]
Abstract
From the start of a synthetic chemist's training, experiments are conducted based on recipes from textbooks and manuscripts that achieve clean reaction outcomes, allowing the scientist to develop practical skills and some chemical intuition. This procedure is often kept long into a researcher's career, as new recipes are developed based on similar reaction protocols, and intuition-guided deviations are conducted through learning from failed experiments. However, when attempting to understand chemical systems of interest, it has been shown that model-based, algorithm-based, and miniaturized high-throughput techniques outperform human chemical intuition and achieve reaction optimization in a much more time- and material-efficient manner; this is covered in detail in this paper. As many synthetic chemists are not exposed to these techniques in undergraduate teaching, this leads to a disproportionate number of scientists that wish to optimize their reactions but are unable to use these methodologies or are simply unaware of their existence. This review highlights the basics, and the cutting-edge, of modern chemical reaction optimization as well as its relation to process scale-up and can thereby serve as a reference for inspired scientists for each of these techniques, detailing several of their respective applications.
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Affiliation(s)
- Connor J. Taylor
- Astex
Pharmaceuticals, 436 Cambridge Science Park, Milton Road, Cambridge CB4 0QA, U.K.
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
| | - Alexander Pomberger
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
| | - Kobi C. Felton
- Department
of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, U.K.
| | - Rachel Grainger
- Astex
Pharmaceuticals, 436 Cambridge Science Park, Milton Road, Cambridge CB4 0QA, U.K.
| | - Magda Barecka
- Chemical
Engineering Department, Northeastern University, 360 Huntington Avenue, Boston, Massachusetts 02115, United States
- Chemistry
and Chemical Biology Department, Northeastern
University, 360 Huntington Avenue, Boston, Massachusetts 02115, United States
- Cambridge
Centre for Advanced Research and Education in Singapore, 1 Create Way, 138602 Singapore
| | - Thomas W. Chamberlain
- Institute
of Process Research and Development, School of Chemistry and School
of Chemical and Process Engineering, University
of Leeds, Leeds LS2 9JT, U.K.
| | - Richard A. Bourne
- Institute
of Process Research and Development, School of Chemistry and School
of Chemical and Process Engineering, University
of Leeds, Leeds LS2 9JT, U.K.
| | | | - Alexei A. Lapkin
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
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15
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Flow photochemistry — from microreactors to large-scale processing. Curr Opin Chem Eng 2023. [DOI: 10.1016/j.coche.2023.100897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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16
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Ruan Y, Lin S, Mo Y. AROPS: A Framework of Automated Reaction Optimization with Parallelized Scheduling. J Chem Inf Model 2023; 63:770-781. [PMID: 36653913 DOI: 10.1021/acs.jcim.2c01168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
With the development of automated experimental platforms and optimization algorithms, chemists can easily optimize chemical reactions in an automated and high-throughput fashion. However, the modules in existing automated experimental platforms are operated in a linear fashion without orchestrating with the optimization algorithm, thus leaving room for further efficiency improvement. Here, we introduced a framework of automated reaction optimization with parallelized scheduling (AROPS) to realize the integration of the optimization algorithm and module scheduling. AROPS relies on a customized Bayesian optimizer to solve multi-reactor/analyzer reaction optimization problems with three different scheduling modes to arrange tasks for various experimental modules. In addition, a mechanism based on probability of improvement (PI) for discarding unpromising ongoing experiments was developed to facilitate freeing up valuable experimental resources in parallelized optimization. We tested the performance of AROPS using a hardware emulator on three representative benchmark reactions encountered in organic synthesis, illustrating that AROPS can trade off optimization time and cost according to the chemists' preference.
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Affiliation(s)
- Yixiang Ruan
- College of Chemical and Biological Engineering, Zhejiang University, Hangzhou310027, China.,ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou311215, China
| | - Sen Lin
- Shanghai ChemLex Technology Co., Ltd., Shanghai201210, China
| | - Yiming Mo
- College of Chemical and Biological Engineering, Zhejiang University, Hangzhou310027, China.,ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou311215, China
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17
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Multivariate curve resolution for kinetic modeling and scale-up prediction. J Flow Chem 2023. [DOI: 10.1007/s41981-022-00252-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Abstract
An imine synthesis was investigated in a nearly isothermal oscillating segmented flow microreactor at different temperatures using non-invasive Raman spectroscopy. Multivariate curve resolution provided a calibration-free approach for obtaining kinetic parameters. The two different multivariate curve resolution approaches, soft and hard modeling, were applied and contrasted, leading to similar results. Taking heat and mass balance into account, the proposed kinetic model was applied for a model-based scale-up prediction. Finally, the reaction was performed in a 0.5 L semi-batch reactor, followed by in-line Raman spectroscopy and off-line gas chromatography analysis. The successful scale-up was demonstrated with a good agreement between measured and predicted concentration profiles.
Highlights
• Oscillation segmented flow reactor with inline Raman spectroscopy.
• Multivariate Curve Resolution with hard and soft constraints.
• High quality kinetic model for scale-up predictions.
Graphical abstract
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18
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McMullen JP, Wyvratt BM. Automated optimization under dynamic flow conditions. REACT CHEM ENG 2023. [DOI: 10.1039/d2re00256f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
The combination of feedback optimization with dynamic operations leads to enhanced data-rich experimentation in flow.
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Affiliation(s)
| | - Brian M. Wyvratt
- Merck & Co., Inc., 26 East Lincoln Avenue, Rahway, NJ, 07065, USA
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19
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Beil SB, Chen TQ, Intermaggio NE, MacMillan DWC. Carboxylic Acids as Adaptive Functional Groups in Metallaphotoredox Catalysis. Acc Chem Res 2022; 55:3481-3494. [PMID: 36472093 PMCID: PMC10680106 DOI: 10.1021/acs.accounts.2c00607] [Citation(s) in RCA: 94] [Impact Index Per Article: 31.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
The development of palladium-catalyzed cross-coupling methods for the activation of C(sp2)-Br bonds facilitated access to arene-rich molecules, enabling a concomitant increase in the prevalence of this structural motif in drug molecules in recent decades. Today, there is a growing appreciation of the value of incorporating saturated C(sp3)-rich scaffolds into pharmaceutically active molecules as a means to achieve improved solubility and physiological stability, providing the impetus to develop new coupling strategies to access these challenging motifs in the most straightforward way possible. As an alternative to classical two-electron chemistry, redox chemistry can enable access to elusive transformations, most recently, by interfacing abundant first-row transition-metal catalysis with photoredox catalysis. As such, the functionalization of ubiquitous and versatile functional handles such as (aliphatic) carboxylic acids via metallaphotoredox catalysis has emerged as a valuable field of research over the past eight years.In this Account, we will outline recent progress in the development of methodologies that employ aliphatic and (hetero)aromatic carboxylic acids as adaptive functional groups. Whereas recent decarboxylative functionalization methodologies often necessitate preactivated aliphatic carboxylic acids in the form of redox-active esters or as ligands for hypervalent iodine reagents, methods that enable the direct use of the native carboxylic acid functionality are highly desired and have been accomplished through metallaphotoredox protocols. As such, we found that bench-stable aliphatic carboxylic acids can undergo diverse transformations, such as alkylation, arylation, amination, and trifluoromethylation, by leveraging metallaphotoredox catalysis with prevalent first-row transition metals such as nickel and copper. Likewise, abundant aryl carboxylic acids are now able to undergo halogenation and borylation, enabling new entry points for traditional, primarily palladium- or copper-catalyzed cross-coupling strategies. Given the breadth of the functional group tolerance of the employed reaction conditions, the late-stage functionalization of abundant carboxylic acids toward desired targets has become a standard tool in reaction design, enabling the synthesis of various diversified drug molecules. The rapid rise of this field has positively inspired pharmaceutical discovery and will be further accelerated by novel reaction development. The achievement of generality through reaction optimization campaigns allows for future breakthroughs that can render protocols more reliable and applicable for industry. This article is intended to highlight, in particular, (i) the employment of aliphatic and (hetero)aryl carboxylic acids as powerful late-stage adaptive functional handles in drug discovery and (ii) the need for the further development of still-elusive and selective transformations.We strongly believe that access to native functionalities such as carboxylic acids as adaptive handles will further inspire researchers across the world to investigate new methodologies for complex molecular targets.
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Affiliation(s)
- Sebastian B Beil
- Merck Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
| | - Tiffany Q Chen
- Merck Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
| | - Nicholas E Intermaggio
- Merck Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
| | - David W C MacMillan
- Merck Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
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20
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van Putten R, Eyke NS, Baumgartner LM, Schultz VL, Filonenko GA, Jensen KF, Pidko EA. Automation and Microfluidics for the Efficient, Fast, and Focused Reaction Development of Asymmetric Hydrogenation Catalysis. CHEMSUSCHEM 2022; 15:e202200333. [PMID: 35470567 PMCID: PMC9401021 DOI: 10.1002/cssc.202200333] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 04/17/2022] [Indexed: 06/14/2023]
Abstract
Automation and microfluidic tools potentially enable efficient, fast, and focused reaction development of complex chemistries, while minimizing resource- and material consumption. The introduction of automation-assisted workflows will contribute to the more sustainable development and scale-up of new and improved catalytic technologies. Herein, the application of automation and microfluidics to the development of a complex asymmetric hydrogenation reaction is described. Screening and optimization experiments were performed using an automated microfluidic platform, which enabled a drastic reduction in the material consumption compared to conventional laboratory practices. A suitable catalytic system was identified from a library of RuII -diamino precatalysts. In situ precatalyst activation was studied with 1 H/31 P nuclear magnetic resonance (NMR), and the reaction was scaled up to multigram quantities in a batch autoclave. These reactions were monitored using an automated liquid-phase sampling system. Ultimately, in less than a week of total experimental time, multigram quantities of the target enantiopure alcohol product were provided by this automation-assisted approach.
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Affiliation(s)
- Robbert van Putten
- Inorganic Systems EngineeringDepartment of Chemical EngineeringDelft University of TechnologyVan der Maasweg 92629HZDelftNetherlands
- Department of Chemical EngineeringMassachusetts Institute of Technology77 Massachusetts Avenue02139CambridgeMassachusettsUnited States
| | - Natalie S. Eyke
- Department of Chemical EngineeringMassachusetts Institute of Technology77 Massachusetts Avenue02139CambridgeMassachusettsUnited States
| | - Lorenz M. Baumgartner
- Department of Chemical EngineeringMassachusetts Institute of Technology77 Massachusetts Avenue02139CambridgeMassachusettsUnited States
| | - Victor L. Schultz
- Department of Chemical EngineeringMassachusetts Institute of Technology77 Massachusetts Avenue02139CambridgeMassachusettsUnited States
| | - Georgy A. Filonenko
- Inorganic Systems EngineeringDepartment of Chemical EngineeringDelft University of TechnologyVan der Maasweg 92629HZDelftNetherlands
| | - Klavs F. Jensen
- Department of Chemical EngineeringMassachusetts Institute of Technology77 Massachusetts Avenue02139CambridgeMassachusettsUnited States
| | - Evgeny A. Pidko
- Inorganic Systems EngineeringDepartment of Chemical EngineeringDelft University of TechnologyVan der Maasweg 92629HZDelftNetherlands
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21
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Ziegenbalg D, Pannwitz A, Rau S, Dietzek‐Ivanšić B, Streb C. Comparative Evaluation of Light-Driven Catalysis: A Framework for Standardized Reporting of Data. Angew Chem Int Ed Engl 2022; 61:e202114106. [PMID: 35698245 PMCID: PMC9401044 DOI: 10.1002/anie.202114106] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Indexed: 01/05/2023]
Abstract
Light-driven homogeneous and heterogeneous catalysis require a complex interplay between light absorption, charge separation, charge transfer, and catalytic turnover. Optical and irradiation parameters as well as reaction engineering aspects play major roles in controlling catalytic performance. This multitude of factors makes it difficult to objectively compare light-driven catalysts and provide an unbiased performance assessment. This Scientific Perspective highlights the importance of collecting and reporting experimental data in homogeneous and heterogeneous light-driven catalysis. A critical analysis of the benefits and limitations of the commonly used experimental indicators is provided. Data collection and reporting according to FAIR principles is discussed in the context of future automated data analysis. The authors propose a minimum dataset as a basis for unified collecting and reporting of experimental data in homogeneous and heterogeneous light-driven catalysis. The community is encouraged to support the future development of this parameter list through an open online repository.
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Affiliation(s)
- Dirk Ziegenbalg
- Institute of Chemical EngineeringUlm UniversityAlbert-Einstein-Allee 1189081UlmGermany
| | - Andrea Pannwitz
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee 1189081UlmGermany
| | - Sven Rau
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee 1189081UlmGermany
| | - Benjamin Dietzek‐Ivanšić
- Institute of Physical Chemistry and Center of Energy and Environmental Chemistry Jena (CEEC Jena)Friedrich Schiller University JenaHelmholtzweg 407743JenaGermany
- Department Functional InterfacesLeibniz Institute of Photonic Technology Jena (IPHT)Albert-Einstein-Straße 907745JenaGermany
| | - Carsten Streb
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee 1189081UlmGermany
- Department of ChemistryJohannes Gutenberg University MainzDuesbergweg 10-1455128MainzGermany
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22
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Ziegenbalg D, Pannwitz A, Rau S, Dietzek‐Ivanšić B, Streb C. Vergleichende Evaluierung lichtgetriebener Katalyse: Ein Rahmenkonzept für das standardisierte Berichten von Daten**. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202114106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Dirk Ziegenbalg
- Institut für Chemieingenieurwesen Universität Ulm Albert-Einstein-Allee 11 89081 Ulm Deutschland
| | - Andrea Pannwitz
- Institut für Anorganische Chemie I Universität Ulm Albert-Einstein-Allee 11 89081 Ulm Deutschland
| | - Sven Rau
- Institut für Anorganische Chemie I Universität Ulm Albert-Einstein-Allee 11 89081 Ulm Deutschland
| | - Benjamin Dietzek‐Ivanšić
- Institut für Physikalische Chemie und Center of Energy and Environmental Chemistry Jena (CEEC Jena) Friedrich-Schiller-Universität Jena Helmholtzweg 4 07743 Jena Deutschland
- Department Funktionale Grenzflächen Leibniz-Institut für Photonische Technologien Jena (IPHT) Albert-Einstein-Straße 9 07745 Jena Deutschland
| | - Carsten Streb
- Institut für Anorganische Chemie I Universität Ulm Albert-Einstein-Allee 11 89081 Ulm Deutschland
- Department of Chemistry Johannes Gutenberg University Mainz Duesbergweg 10-14 55128 Mainz Germany
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23
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Development of a palladium-catalyzed decarboxylative arene cross-coupling of pyrrole derivatives in a flow reactor. J Flow Chem 2022. [DOI: 10.1007/s41981-022-00222-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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24
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25
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Buglioni L, Raymenants F, Slattery A, Zondag SDA, Noël T. Technological Innovations in Photochemistry for Organic Synthesis: Flow Chemistry, High-Throughput Experimentation, Scale-up, and Photoelectrochemistry. Chem Rev 2022; 122:2752-2906. [PMID: 34375082 PMCID: PMC8796205 DOI: 10.1021/acs.chemrev.1c00332] [Citation(s) in RCA: 277] [Impact Index Per Article: 92.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Indexed: 02/08/2023]
Abstract
Photoinduced chemical transformations have received in recent years a tremendous amount of attention, providing a plethora of opportunities to synthetic organic chemists. However, performing a photochemical transformation can be quite a challenge because of various issues related to the delivery of photons. These challenges have barred the widespread adoption of photochemical steps in the chemical industry. However, in the past decade, several technological innovations have led to more reproducible, selective, and scalable photoinduced reactions. Herein, we provide a comprehensive overview of these exciting technological advances, including flow chemistry, high-throughput experimentation, reactor design and scale-up, and the combination of photo- and electro-chemistry.
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Affiliation(s)
- Laura Buglioni
- Micro
Flow Chemistry and Synthetic Methodology, Department of Chemical Engineering
and Chemistry, Eindhoven University of Technology, Het Kranenveld, Bldg 14—Helix, 5600 MB, Eindhoven, The Netherlands
- Flow
Chemistry Group, van ’t Hoff Institute for Molecular Sciences
(HIMS), Universiteit van Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Fabian Raymenants
- Flow
Chemistry Group, van ’t Hoff Institute for Molecular Sciences
(HIMS), Universiteit van Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Aidan Slattery
- Flow
Chemistry Group, van ’t Hoff Institute for Molecular Sciences
(HIMS), Universiteit van Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Stefan D. A. Zondag
- Flow
Chemistry Group, van ’t Hoff Institute for Molecular Sciences
(HIMS), Universiteit van Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Timothy Noël
- Flow
Chemistry Group, van ’t Hoff Institute for Molecular Sciences
(HIMS), Universiteit van Amsterdam (UvA), Science Park 904, 1098 XH, Amsterdam, The Netherlands
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26
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Konan KE, Abollé A, Barré E, Aka EC, Coeffard V, Felpin FX. Developing flow photo-thiol–ene functionalizations of cinchona alkaloids with an autonomous self-optimizing flow reactor. REACT CHEM ENG 2022. [DOI: 10.1039/d1re00509j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Continuous flow photo-thiol–ene reactions on cinchona alkaloids with a variety of organic thiols have been developed using enabling technologies such as a self-optimizing flow photochemical reactor.
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Affiliation(s)
- Kouakou Eric Konan
- CNRS, Université de Nantes, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
- Laboratoire de Thermodynamique et de Physico-Chimie du Milieu, Université Nangui Abrogoua, 02 BP 801 Abidjan 02, Côte d'Ivoire
| | - Abollé Abollé
- Laboratoire de Thermodynamique et de Physico-Chimie du Milieu, Université Nangui Abrogoua, 02 BP 801 Abidjan 02, Côte d'Ivoire
| | - Elvina Barré
- CNRS, Université de Nantes, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - Ehu Camille Aka
- CNRS, Université de Nantes, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
- Laboratoire de Thermodynamique et de Physico-Chimie du Milieu, Université Nangui Abrogoua, 02 BP 801 Abidjan 02, Côte d'Ivoire
| | - Vincent Coeffard
- CNRS, Université de Nantes, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - François-Xavier Felpin
- CNRS, Université de Nantes, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
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27
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Crandall Z, Basemann K, Qi L, Windus TL. Rxn Rover: automation of chemical reactions with user-friendly, modular software. REACT CHEM ENG 2022. [DOI: 10.1039/d1re00265a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Automation of chemical reactions through tools such as Rxn Rover in research and development is an enabling technology to reduce cost and waste management in technology transformations towards renewable feedstocks and energy in the chemical industry.
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Affiliation(s)
- Zachery Crandall
- U.S. DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA
| | - Kevin Basemann
- U.S. DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA
| | - Long Qi
- U.S. DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
| | - Theresa L. Windus
- U.S. DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA
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28
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Nandiwale KY, Hart T, Zahrt AF, Nambiar AMK, Mahesh PT, Mo Y, Nieves-Remacha MJ, Johnson MD, García-Losada P, Mateos C, Rincón JA, Jensen KF. Continuous stirred-tank reactor cascade platform for self-optimization of reactions involving solids. REACT CHEM ENG 2022. [DOI: 10.1039/d2re00054g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Research-scale fully automated flow platform for reaction self-optimization with solids handling facilitates identification of optimal conditions for continuous manufacturing of pharmaceuticals while reducing amounts of raw materials consumed.
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Affiliation(s)
- Kakasaheb Y. Nandiwale
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Travis Hart
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Andrew F. Zahrt
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Anirudh M. K. Nambiar
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Prajwal T. Mahesh
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Yiming Mo
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | | | - Martin D. Johnson
- Small Molecule Design and Development, Eli Lilly and Company, Indianapolis, Indiana 46285, USA
| | - Pablo García-Losada
- Centro de Investigación Lilly S.A., Avda. de la Industria 30, Alcobendas-Madrid 28108, Spain
| | - Carlos Mateos
- Centro de Investigación Lilly S.A., Avda. de la Industria 30, Alcobendas-Madrid 28108, Spain
| | - Juan A. Rincón
- Centro de Investigación Lilly S.A., Avda. de la Industria 30, Alcobendas-Madrid 28108, Spain
| | - Klavs F. Jensen
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
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29
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Knoll S, Jusner CE, Sagmeister P, Williams JD, Hone CA, Horn M, Kappe CO. Autonomous model-based experimental design for rapid reaction development. REACT CHEM ENG 2022. [DOI: 10.1039/d2re00208f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
To automate and democratize model-based experimental design for flow chemistry applications, we report the development of open-source software, Optipus. Reaction models are built in an iterative and automated fashion, for rapid reaction development.
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Affiliation(s)
- Sebastian Knoll
- Institute of Automation and Control, Graz University of Technology, Inffeldgasse 21b, 8010 Graz, Austria
| | - Clemens E. Jusner
- Center for Continuous Synthesis and Processing (CCFLOW), Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010 Graz, Austria
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Peter Sagmeister
- Center for Continuous Synthesis and Processing (CCFLOW), Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010 Graz, Austria
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Jason D. Williams
- Center for Continuous Synthesis and Processing (CCFLOW), Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010 Graz, Austria
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Christopher A. Hone
- Center for Continuous Synthesis and Processing (CCFLOW), Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010 Graz, Austria
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Martin Horn
- Institute of Automation and Control, Graz University of Technology, Inffeldgasse 21b, 8010 Graz, Austria
| | - C. Oliver Kappe
- Center for Continuous Synthesis and Processing (CCFLOW), Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010 Graz, Austria
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstrasse 28, 8010 Graz, Austria
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30
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Delgado P, Glass RJ, Geraci G, Duvadie R, Majumdar D, Robinson RI, Elmaarouf I, Mikus M, Tan KL. Use of Green Solvents in Metallaphotoredox Cross-Electrophile Coupling Reactions Utilizing a Lipophilic Modified Dual Ir/Ni Catalyst System. J Org Chem 2021; 86:17428-17436. [PMID: 34808052 DOI: 10.1021/acs.joc.1c02013] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Facilitating photoredox coupling reactions in process-friendly green solvents was achieved by the successful application of a dual Ir/Ni catalyst system with enhanced solubility properties. These photochemical reactions (specifically Br-Br sp2-sp3 cross electrophile coupling) are reported in a head to head comparison to the standard di-t-Bu bipyridine ligand Ir/Ni catalyst system. This presentation highlights the benefits of altering the solubility properties of the ligands used in the Ir/Ni dual catalyst.
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Affiliation(s)
- Pete Delgado
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Raoul J Glass
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Gina Geraci
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Rohit Duvadie
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Dyuti Majumdar
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Richard I Robinson
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Imran Elmaarouf
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Malte Mikus
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Kian L Tan
- Global Discovery Chemistry-SynTech Group, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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31
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Duvadie R, Pomberger A, Mo Y, Altinoglu EI, Hsieh HW, Nandiwale KY, Schultz VL, Jensen KF, Robinson RI. Photoredox Iridium–Nickel Dual Catalyzed Cross-Electrophile Coupling: From a Batch to a Continuous Stirred-Tank Reactor via an Automated Segmented Flow Reactor. Org Process Res Dev 2021. [DOI: 10.1021/acs.oprd.1c00251] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Rohit Duvadie
- Global Discovery Chemistry, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Alexander Pomberger
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Yiming Mo
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Erhan I. Altinoglu
- Chemical and Pharmaceutical Profiling, Novartis Global Drug Development, 700 Main Street South, Cambridge, Massachusetts 02139, United States
| | - Hsiao-Wu Hsieh
- Global Discovery Chemistry, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Kakasaheb Y. Nandiwale
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Victor L. Schultz
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Klavs F. Jensen
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Richard I. Robinson
- Global Discovery Chemistry, Novartis Institutes for Biomedical Research, 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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32
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Candish L, Collins KD, Cook GC, Douglas JJ, Gómez-Suárez A, Jolit A, Keess S. Photocatalysis in the Life Science Industry. Chem Rev 2021; 122:2907-2980. [PMID: 34558888 DOI: 10.1021/acs.chemrev.1c00416] [Citation(s) in RCA: 132] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
In the pursuit of new pharmaceuticals and agrochemicals, chemists in the life science industry require access to mild and robust synthetic methodologies to systematically modify chemical structures, explore novel chemical space, and enable efficient synthesis. In this context, photocatalysis has emerged as a powerful technology for the synthesis of complex and often highly functionalized molecules. This Review aims to summarize the published contributions to the field from the life science industry, including research from industrial-academic partnerships. An overview of the synthetic methodologies developed and strategic applications in chemical synthesis, including peptide functionalization, isotope labeling, and both DNA-encoded and traditional library synthesis, is provided, along with a summary of the state-of-the-art in photoreactor technology and the effective upscaling of photocatalytic reactions.
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Affiliation(s)
- Lisa Candish
- Drug Discovery Sciences, Pharmaceuticals, Bayer AG, 42113 Wuppertal, Germany
| | - Karl D Collins
- Bayer Foundation, Public Affairs, Science and Sustainability, Bayer AG, 51368 Leverkusen, Germany
| | - Gemma C Cook
- Discovery High-Throughput Chemistry, Medicinal Science and Technology, GlaxoSmithKline, Stevenage SG1 2NY, U.K
| | - James J Douglas
- Early Chemical Development, Pharmaceutical Sciences, R&D, AstraZeneca, Macclesfield SK10 2NA, U.K
| | - Adrián Gómez-Suárez
- Organic Chemistry, Bergische Universität Wuppertal, 42119 Wuppertal, Germany
| | - Anais Jolit
- Medicinal Chemistry Department, Neuroscience Discovery Research, AbbVie Deutschland GmbH & Co. KG, 67061 Ludwigshafen, Germany
| | - Sebastian Keess
- Medicinal Chemistry Department, Neuroscience Discovery Research, AbbVie Deutschland GmbH & Co. KG, 67061 Ludwigshafen, Germany
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33
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Christensen M, Yunker LPE, Adedeji F, Häse F, Roch LM, Gensch T, dos Passos Gomes G, Zepel T, Sigman MS, Aspuru-Guzik A, Hein JE. Data-science driven autonomous process optimization. Commun Chem 2021; 4:112. [PMID: 36697524 PMCID: PMC9814253 DOI: 10.1038/s42004-021-00550-x] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 07/14/2021] [Indexed: 01/28/2023] Open
Abstract
Autonomous process optimization involves the human intervention-free exploration of a range process parameters to improve responses such as product yield and selectivity. Utilizing off-the-shelf components, we develop a closed-loop system for carrying out parallel autonomous process optimization experiments in batch. Upon implementation of our system in the optimization of a stereoselective Suzuki-Miyaura coupling, we find that the definition of a set of meaningful, broad, and unbiased process parameters is the most critical aspect of successful optimization. Importantly, we discern that phosphine ligand, a categorical parameter, is vital to determination of the reaction outcome. To date, categorical parameter selection has relied on chemical intuition, potentially introducing bias into the experimental design. In seeking a systematic method for selecting a diverse set of phosphine ligands, we develop a strategy that leverages computed molecular feature clustering. The resulting optimization uncovers conditions to selectively access the desired product isomer in high yield.
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Affiliation(s)
- Melodie Christensen
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, Vancouver, BC Canada ,grid.417993.10000 0001 2260 0793Department of Process Research and Development, Merck & Co., Inc., Rahway, NJ USA
| | - Lars P. E. Yunker
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, Vancouver, BC Canada
| | - Folarin Adedeji
- grid.417993.10000 0001 2260 0793Department of Process Research and Development, Merck & Co., Inc., Rahway, NJ USA
| | - Florian Häse
- grid.38142.3c000000041936754XDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA USA ,grid.17063.330000 0001 2157 2938Department of Chemistry, University of Toronto, Toronto, ON Canada ,grid.17063.330000 0001 2157 2938Department of Computer Science, University of Toronto, Toronto, ON Canada ,grid.494618.6Vector Institute for Artificial Intelligence, Toronto, ON Canada ,ChemOS Sàrl, Lausanne, Vaud Switzerland
| | - Loïc M. Roch
- grid.38142.3c000000041936754XDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA USA ,grid.17063.330000 0001 2157 2938Department of Chemistry, University of Toronto, Toronto, ON Canada ,grid.17063.330000 0001 2157 2938Department of Computer Science, University of Toronto, Toronto, ON Canada ,ChemOS Sàrl, Lausanne, Vaud Switzerland
| | - Tobias Gensch
- grid.223827.e0000 0001 2193 0096Department of Chemistry, University of Utah, Salt Lake City, UT USA
| | - Gabriel dos Passos Gomes
- grid.17063.330000 0001 2157 2938Department of Chemistry, University of Toronto, Toronto, ON Canada ,grid.17063.330000 0001 2157 2938Department of Computer Science, University of Toronto, Toronto, ON Canada ,grid.494618.6Vector Institute for Artificial Intelligence, Toronto, ON Canada
| | - Tara Zepel
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, Vancouver, BC Canada
| | - Matthew S. Sigman
- grid.223827.e0000 0001 2193 0096Department of Chemistry, University of Utah, Salt Lake City, UT USA
| | - Alán Aspuru-Guzik
- grid.38142.3c000000041936754XDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA USA ,grid.17063.330000 0001 2157 2938Department of Chemistry, University of Toronto, Toronto, ON Canada ,grid.17063.330000 0001 2157 2938Department of Computer Science, University of Toronto, Toronto, ON Canada ,grid.494618.6Vector Institute for Artificial Intelligence, Toronto, ON Canada ,grid.440050.50000 0004 0408 2525Canadian Institute for Advanced Research, Toronto, ON Canada
| | - Jason E. Hein
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, Vancouver, BC Canada
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34
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González-Esguevillas M, Fernández DF, Rincón JA, Barberis M, de Frutos O, Mateos C, García-Cerrada S, Agejas J, MacMillan DWC. Rapid Optimization of Photoredox Reactions for Continuous-Flow Systems Using Microscale Batch Technology. ACS CENTRAL SCIENCE 2021; 7:1126-1134. [PMID: 34345665 PMCID: PMC8323116 DOI: 10.1021/acscentsci.1c00303] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Indexed: 05/03/2023]
Abstract
Photoredox catalysis has emerged as a powerful and versatile platform for the synthesis of complex molecules. While photocatalysis is already broadly used in small-scale batch chemistry across the pharmaceutical sector, recent efforts have focused on performing these transformations in process chemistry due to the inherent challenges of batch photocatalysis on scale. However, translating optimized batch conditions to flow setups is challenging, and a general approach that is rapid, convenient, and inexpensive remains largely elusive. Herein, we report the development of a new approach that uses a microscale high-throughput experimentation (HTE) platform to identify optimal reaction conditions that can be directly translated to flow systems. A key design point is to simulate the flow-vessel pathway within a microscale reaction plate, which enables the rapid identification of optimal flow reaction conditions using only a small number of simultaneous experiments. This approach has been validated against a range of widely used photoredox reactions and, importantly, was found to translate accurately to several commercial flow reactors. We expect that the generality and operational efficiency of this new HTE approach to photocatalysis will allow rapid identification of numerous flow protocols for scale.
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Affiliation(s)
| | - David F. Fernández
- Merck
Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
| | - Juan A. Rincón
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - Mario Barberis
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - Oscar de Frutos
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - Carlos Mateos
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - Susana García-Cerrada
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - Javier Agejas
- Centro
de Investigación Eli Lilly, S. A., Avda. de la Industria 30, 28108 Alcobendas, Madrid, Spain
| | - David W. C. MacMillan
- Merck
Center for Catalysis at Princeton University, Princeton, New Jersey 08544, United States
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35
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Lopez-Rodriguez R, Harding MJ, Gibson G, Girard KP, Ferguson S. Design of a Combined Modular and 3D-Printed Falling Film Solution Layer Crystallizer for Intermediate Purification in Continuous Production of Pharmaceuticals. Ind Eng Chem Res 2021; 60:10276-10285. [PMID: 34475633 PMCID: PMC8385708 DOI: 10.1021/acs.iecr.1c00988] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Revised: 06/13/2021] [Accepted: 06/15/2021] [Indexed: 11/29/2022]
Abstract
A highly scalable combined modular and 3D-printed falling film crystallization device is developed and demonstrated herein; the device uses a small, complex, printed overflow-based film distribution part that ensures formation of a well-distributed heated liquid film around a modular, tubular residence time/crystallizer section, enabling extended residence times to be achieved. A model API (ibuprofen) and impurity (ibuprofen ethyl ester) were used as a test system in the evaluation of the novel crystallizer design. The proposed crystallizer was run using three operational configurations: batch, cyclical batch, and continuous feed, all with intermittent removal of product. Results were suitable for intermediate purification requirements, and stable operation was demonstrated over multiple cycles, indicating that this approach should be compatible with parallel semicontinuous operation for intermediate purification and solvent swap applications in the manufacture of drugs.
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Affiliation(s)
- Rafael Lopez-Rodriguez
- School
of Chemical and Bioprocess Engineering, University College Dublin, Belfield, Dublin 4, Ireland
- SSPC,
The SFI Research Centre for Pharmaceuticals, School of Chemical and
Bioprocess Engineering, University College
Dublin, Belfield, Dublin 4, Ireland
| | - Matthew J. Harding
- School
of Chemical and Bioprocess Engineering, University College Dublin, Belfield, Dublin 4, Ireland
- I-Form,
The SFI Research Centre for Advanced Manufacturing, School of Chemical
and Bioprocess Engineering, University College
Dublin, Belfield, Dublin 4, Ireland
| | - Geoff Gibson
- Pfizer
Ireland Pharmaceuticals, Ringaskiddy, Ireland
| | - Kevin P. Girard
- Pfizer
Inc. Chemical R&D, Groton, Connecticut 06340, United States
| | - Steven Ferguson
- School
of Chemical and Bioprocess Engineering, University College Dublin, Belfield, Dublin 4, Ireland
- SSPC,
The SFI Research Centre for Pharmaceuticals, School of Chemical and
Bioprocess Engineering, University College
Dublin, Belfield, Dublin 4, Ireland
- I-Form,
The SFI Research Centre for Advanced Manufacturing, School of Chemical
and Bioprocess Engineering, University College
Dublin, Belfield, Dublin 4, Ireland
- National
Institute for Bioprocess Research and Training, 24 Foster’s Avenue, Belfield, Blackrock, Co. Dublin A94 X099, Ireland
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36
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Breen CP, Nambiar AM, Jamison TF, Jensen KF. Ready, Set, Flow! Automated Continuous Synthesis and Optimization. TRENDS IN CHEMISTRY 2021. [DOI: 10.1016/j.trechm.2021.02.005] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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37
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38
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Cao L, Russo D, Lapkin AA. Automated robotic platforms in design and development of formulations. AIChE J 2021. [DOI: 10.1002/aic.17248] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Liwei Cao
- Department of Chemical Engineering and Biotechnology University of Cambridge Cambridge UK
- Cambridge Centre for Advanced Research and Education in Singapore, CARES Ltd. Singapore
| | - Danilo Russo
- Department of Chemical Engineering and Biotechnology University of Cambridge Cambridge UK
| | - Alexei A. Lapkin
- Department of Chemical Engineering and Biotechnology University of Cambridge Cambridge UK
- Cambridge Centre for Advanced Research and Education in Singapore, CARES Ltd. Singapore
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39
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Shields BJ, Stevens J, Li J, Parasram M, Damani F, Alvarado JIM, Janey JM, Adams RP, Doyle AG. Bayesian reaction optimization as a tool for chemical synthesis. Nature 2021; 590:89-96. [DOI: 10.1038/s41586-021-03213-y] [Citation(s) in RCA: 132] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Accepted: 12/11/2020] [Indexed: 02/04/2023]
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40
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Vasudevan N, Aka EC, Barré E, Wimmer E, Cortés-Borda D, Giraudeau P, Farjon J, Rodriguez-Zubiri M, Felpin FX. Development of a continuous flow synthesis of FGIN-1-27 enabled by in-line 19F NMR analyses and optimization algorithms. REACT CHEM ENG 2021. [DOI: 10.1039/d1re00220a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A continuous flow synthesis of FGIN-1-27 has been developed using enabling technologies such as real-time in-line benchtop 19F NMR analysis and an optimization algorithm.
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Affiliation(s)
- N. Vasudevan
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - Ehu C. Aka
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - Elvina Barré
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - Eric Wimmer
- Institut de Recherches Servier, 125 Chemin de Ronde, 78290 Croissy sur Seine, France
| | - Daniel Cortés-Borda
- Universidad del Atlántico, Facultad de ciencias básicas, Carrera 30 # 8-49, Puerto Colombia, Atlántico, Colombia
| | - Patrick Giraudeau
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | - Jonathan Farjon
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
| | | | - François-Xavier Felpin
- Université de Nantes, CNRS, CEISAM UMR 6230, 2 rue de la Houssinière, 44322 Nantes, France
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41
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Neyt NC, Riley DL. Application of reactor engineering concepts in continuous flow chemistry: a review. REACT CHEM ENG 2021. [DOI: 10.1039/d1re00004g] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The adoption of flow technology for the manufacture of chemical entities, and in particular pharmaceuticals, has seen rapid growth over the past two decades with the technology now blurring the lines between chemistry and chemical engineering.
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Affiliation(s)
- Nicole C. Neyt
- Faculty of Natural and Agricultural Sciences
- Department of Chemistry
- University of Pretoria
- South Africa
| | - Darren L. Riley
- Faculty of Natural and Agricultural Sciences
- Department of Chemistry
- University of Pretoria
- South Africa
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42
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Lu JM, Wang HF, Pan JZ, Fang Q. Research Progress of Microfluidic Technique in Synthesis of Micro/Nano Materials. ACTA CHIMICA SINICA 2021. [DOI: 10.6023/a21030086] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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43
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Bryden MA, Zysman-Colman E. Organic thermally activated delayed fluorescence (TADF) compounds used in photocatalysis. Chem Soc Rev 2021; 50:7587-7680. [PMID: 34002736 DOI: 10.1039/d1cs00198a] [Citation(s) in RCA: 186] [Impact Index Per Article: 46.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Organic compounds that show Thermally Activated Delayed Fluorescence (TADF) have become wildly popular as next-generation emitters in organic light emitting diodes (OLEDs). Since 2016, a subset of these have found increasing use as photocatalysts. This review comprehensively highlights their potential by documenting the diversity of the reactions where an organic TADF photocatalyst can be used in lieu of a noble metal complex photocatalyst. Beyond the small number of TADF photocatalysts that have been used to date, the analysis conducted within this review reveals the wider potential of organic donor-acceptor TADF compounds as photocatalysts. A discussion of the benefits of compounds showing TADF for photocatalysis is presented, which paints a picture of a very promising future for organic photocatalyst development.
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Affiliation(s)
- Megan Amy Bryden
- Organic Semiconductor Centre, EaStCHEM School of Chemistry, University of St Andrews, St Andrews, KY16 9ST, UK.
| | - Eli Zysman-Colman
- Organic Semiconductor Centre, EaStCHEM School of Chemistry, University of St Andrews, St Andrews, KY16 9ST, UK.
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44
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Sun AC, Steyer DJ, Allen AR, Payne EM, Kennedy RT, Stephenson CRJ. A droplet microfluidic platform for high-throughput photochemical reaction discovery. Nat Commun 2020; 11:6202. [PMID: 33273454 PMCID: PMC7712835 DOI: 10.1038/s41467-020-19926-z] [Citation(s) in RCA: 80] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Accepted: 11/04/2020] [Indexed: 02/03/2023] Open
Abstract
The implementation of continuous flow technology is critical towards enhancing the application of photochemical reactions for industrial process development. However, there are significant time and resource constraints associated with translating discovery scale vial-based batch reactions to continuous flow scale-up conditions. Herein we report the development of a droplet microfluidic platform, which enables high-throughput reaction discovery in flow to generate pharmaceutically relevant compound libraries. This platform allows for enhanced material efficiency, as reactions can be performed on picomole scale. Furthermore, high-throughput data collection via on-line ESI mass spectrometry facilitates the rapid analysis of individual, nanoliter-sized reaction droplets at acquisition rates of 0.3 samples/s. We envision this high-throughput screening platform to expand upon the robust capabilities and impact of photochemical reactions in drug discovery and development.
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Affiliation(s)
- Alexandra C Sun
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA
| | - Daniel J Steyer
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA
| | - Anthony R Allen
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA
| | - Emory M Payne
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA
| | - Robert T Kennedy
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA.
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45
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Vasudevan N, Wimmer E, Barré E, Cortés‐Borda D, Rodriguez‐Zubiri M, Felpin F. Direct C−H Arylation of Indole‐3‐Acetic Acid Derivatives Enabled by an Autonomous Self‐Optimizing Flow Reactor. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202001217] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- N. Vasudevan
- Université de Nantes CNRS CEISAM UMR 6230 2 rue de la Houssinière 44322 Nantes France
| | - Eric Wimmer
- Université de Nantes CNRS CEISAM UMR 6230 2 rue de la Houssinière 44322 Nantes France
| | - Elvina Barré
- Université de Nantes CNRS CEISAM UMR 6230 2 rue de la Houssinière 44322 Nantes France
| | - Daniel Cortés‐Borda
- Université de Nantes CNRS CEISAM UMR 6230 2 rue de la Houssinière 44322 Nantes France
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46
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Abstract
AbstractOscillatory flow reactors (OFRs) superimpose an oscillatory flow to the net movement through a flow reactor. OFRs have been engineered to enable improved mixing, excellent heat- and mass transfer and good plug flow character under a broad range of operating conditions. Such features render these reactors appealing, since they are suitable for reactions that require long residence times, improved mass transfer (such as in biphasic liquid-liquid systems) or to homogeneously suspend solid particles. Various OFR configurations, offering specific features, have been developed over the past two decades, with significant progress still being made. This review outlines the principles and recent advances in OFR technology and overviews the synthetic applications of OFRs for liquid-liquid and solid-liquid biphasic systems.
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47
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Zhu DL, Xu R, Wu Q, Li HY, Lang JP, Li HX. Nickel-Catalyzed Sonogashira C(sp)–C(sp2) Coupling through Visible-Light Sensitization. J Org Chem 2020; 85:9201-9212. [DOI: 10.1021/acs.joc.0c01177] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Da-Liang Zhu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Ruijie Xu
- College of Overseas Education, Nanjing Tech University, Nanjing 211816, People’s Republic of China
| | - Qi Wu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Hai-Yan Li
- Analysis and Testing Center, Soochow University, Suzhou 215123, People’s Republic of China
| | - Jian-Ping Lang
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Hong-Xi Li
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
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48
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Debrouwer W, Kimpe W, Dangreau R, Huvaere K, Gemoets HPL, Mottaghi M, Kuhn S, Van Aken K. Ir/Ni Photoredox Dual Catalysis with Heterogeneous Base Enabled by an Oscillatory Plug Flow Photoreactor. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00150] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
| | - Wim Kimpe
- EcoSynth, Industrielaan 12, 9800 Deinze, Belgium
| | | | | | | | - Milad Mottaghi
- Department of Chemical Engineering, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Simon Kuhn
- Department of Chemical Engineering, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Koen Van Aken
- EcoSynth, Industrielaan 12, 9800 Deinze, Belgium
- Creaflow, Industrielaan 12, 9800 Deinze, Belgium
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49
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Grimm I, Hauer ST, Schulte T, Wycich G, Collins KD, Lovis K, Candish L. Upscaling Photoredox Cross-Coupling Reactions in Batch Using Immersion-Well Reactors. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00070] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Isabelle Grimm
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
| | - Simone T. Hauer
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
| | - Tim Schulte
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
| | - Gina Wycich
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
| | - Karl D. Collins
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
| | - Kai Lovis
- Chemical Development, Bayer AG Pharmaceuticals, Friedrich-Ebert Straβe 217, 42117 Wuppertal, Germany
| | - Lisa Candish
- Small Molecule Innovations, Bayer AG Pharmaceuticals, Aprather Weg 18a, 42113 Wuppertal, Germany
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50
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van Vliet KM, van Leeuwen NS, Brouwer AM, de Bruin B. Visible-light-induced addition of carboxymethanide to styrene from monochloroacetic acid. Beilstein J Org Chem 2020; 16:398-408. [PMID: 32273903 PMCID: PMC7113555 DOI: 10.3762/bjoc.16.38] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 03/05/2020] [Indexed: 11/23/2022] Open
Abstract
Where monochloroacetic acid is widely used as a starting material for the synthesis of relevant groups of compounds, many of these synthetic procedures are based on nucleophilic substitution of the carbon chlorine bond. Oxidative or reductive activation of monochloroacetic acid results in radical intermediates, leading to reactivity different from the traditional reactivity of this compound. Here, we investigated the possibility of applying monochloroacetic acid as a substrate for photoredox catalysis with styrene to directly produce γ-phenyl-γ-butyrolactone. Instead of using nucleophilic substitution, we cleaved the carbon chlorine bond by single-electron reduction, creating a radical species. We observed that the reaction works best in nonpolar solvents. The reaction does not go to full conversion, but selectively forms γ-phenyl-γ-butyrolactone and 4-chloro-4-phenylbutanoic acid. Over time the catalyst precipitates from solution (perhaps in a decomposed form in case of fac-[Ir(ppy)3]), which was proven by mass spectrometry and EPR spectroscopy for one of the catalysts (N,N-5,10-di(2-naphthalene)-5,10-dihydrophenazine) used in this work. The generation of HCl resulting from lactone formation could be an additional problem for organometallic photoredox catalysts used in this reaction. In an attempt to trap one of the radical intermediates with TEMPO, we observed a compound indicating the generation of a chloromethyl radical.
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Affiliation(s)
- Kaj M van Vliet
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Nicole S van Leeuwen
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Albert M Brouwer
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
| | - Bas de Bruin
- Van 't Hoff Institute for Molecular Sciences, Faculty of Science, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, Netherlands
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