1
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Zhu TY, Zhao YC, Sha C, Nawab S, Liu JY, Yong YC. Enhanced hydrogen production by robust covalent biohybrid based on cell membrane specific click chemistry. BIORESOURCE TECHNOLOGY 2025; 427:132410. [PMID: 40120987 DOI: 10.1016/j.biortech.2025.132410] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2025] [Revised: 03/16/2025] [Accepted: 03/17/2025] [Indexed: 03/25/2025]
Abstract
The light-driven semiconductor-bacteria hybrid holds great potential for synthesis of diverse solar chemicals and fuels. However, the efficiency of electron transfer between biotic-abiotic interface often suffers from the insufficient robustness of biohybrid, which significantly imped its performance and applications. Here, a highly robust biohybrid was established by specifically and covalently grafting carbon quantum dots (CDs) onto bacterial cell membrane via the copper-catalyzed azide-Alkyne click (CuAAC) reaction. The formation of covalent bonds dramatically enhanced the robustness of hybrid and further shorten the distance of biotic-abiotic interface, endowing long-term stability under different conditions. Consequently, the cell membrane-specific covalent-biohybrid exhibited a 7.3-fold higher hydrogen production due to enhanced system stability, higher load of CDs on the cell surface and direct electron transfer efficiency. This work demonstrated a new and promising approach to improve the robustness and performance of photocatalytic semiconductor-bacteria hybrid system, which would further diversify the toolbox for solar chemicals/fuels production.
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Affiliation(s)
- Tian-Yu Zhu
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China
| | - Yi-Cheng Zhao
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China
| | - Chong Sha
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China.
| | - Said Nawab
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China
| | - Jun-Ying Liu
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China
| | - Yang-Chun Yong
- Institute for Energy Research, School of the Environment and Safety Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China; School of Emergency Management, Jiangsu University, 301 Xuefu Road, Zhenjiang 212013, PR China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China.
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2
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Zhou J, Cheng J, Xu H. Recent Progress in Developing Conjugated Polymer-Microorganism Biohybrids for Semi-Artificial Photosynthetic Energy Conversion. Macromol Rapid Commun 2025:e2500234. [PMID: 40375629 DOI: 10.1002/marc.202500234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2025] [Revised: 04/27/2025] [Indexed: 05/18/2025]
Abstract
Semi-artificial photosynthesis, which merges the precision of synthetic materials with the catalytic versatility of biological systems, offers a transformative route to solar-driven chemical fuel production and sustainable energy conversion. Conjugated polymers, with their high molar absorption coefficients, broad spectral responsiveness, and tunable semiconducting properties, have emerged as key components in advancing semi-artificial photosynthetic biohybrids. Their capacity for targeted surface modification not only facilitates enhanced interfacing with biological catalysts but also optimizes charge transfer across the bio-synthetic interface. This review traces the evolution of conjugated polymer-based biohybrids, highlighting recent advancements that extend microbial light harvesting, support cellular resilience against environmental stress, and optimize charge transfer via precise structure-activity relationships. Furthermore, this review explores the challenges and opportunities in this field, offering a roadmap for the design of durable and high-performance biohybrid systems. Through the integration of conjugated polymers and microorganisms, this review outlines a strategic approach for solar-driven chemical energy conversion, paving the way for eco-friendly energy solutions.
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Affiliation(s)
- Jie Zhou
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), State Key Laboratory of Precision and Intelligent Chemistry, Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, China
| | - Jun Cheng
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), State Key Laboratory of Precision and Intelligent Chemistry, Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, China
| | - Hangxun Xu
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), State Key Laboratory of Precision and Intelligent Chemistry, Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, China
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3
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Jeevanandham S, Ramasundaram S, Vijay N, Oh TH, Selvan ST. Recent Progress in Designing Nanomaterial Biohybrids for Artificial Photosynthesis. NANOMATERIALS (BASEL, SWITZERLAND) 2025; 15:730. [PMID: 40423120 DOI: 10.3390/nano15100730] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2025] [Revised: 05/06/2025] [Accepted: 05/10/2025] [Indexed: 05/28/2025]
Abstract
In natural photosynthesis, solar energy is utilized to convert water and CO2 into energy-rich compounds. However, in practice, the maximum quantum efficiency of natural photosynthesis is limited to 6.0%. Conversely, artificial photosynthesis (AP) systems utilize solar energy to convert CO2 into biosynthetic solar fuels and value-added chemicals. To mimic natural photosystems, AP integrates light-harvesting chemical catalysts with the enzyme-mediated biological catalysis occurring in microorganisms. Similar to solar energy-based optoelectronic power sources, AP has also been recognized as a promising option for reducing carbon emissions generated by the fossil fuel-based power sector. Typical quantum efficiency of AP is 5-10%; in some cases, it exceeds 20%. Recent advancements have focused on nanomaterial biohybrids (NBHs), combining nanomaterial-based photocatalysts/photosensitizers with microorganisms/enzymes for enhanced oxidation/reduction reactions. The synergistic interaction between nanomaterials and microorganisms, facilitated by their comparable size and tunable surface properties, enables improved solar energy absorption, charge separation, and conversion. NBHs offer a versatile platform for sustainable solar energy harvesting and conversion, overcoming the limitations of natural and fully abiotic photosynthesis systems. This review highlights recent breakthroughs in diverse platforms of sunlight and visible light-driven NBH-based AP systems for CO2 fixation, H2 production, water splitting, and value-added chemical synthesis. The synthesis strategies, operating mechanisms, and challenges are highlighted.
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Affiliation(s)
- Sampathkumar Jeevanandham
- Molecular Science and Engineering Laboratory, Amity Institute of Click Chemistry Research and Studies, Amity University, Noida 201313, India
| | | | - Natarajan Vijay
- School of Chemical Engineering, Yeungnam University, Gyeongsan 38541, Republic of Korea
- Department of Interdisciplinary Sciences, National Institute of Food Technology and Entrepreneurship Management, Sonipat 131028, India
| | - Tae Hwan Oh
- School of Chemical Engineering, Yeungnam University, Gyeongsan 38541, Republic of Korea
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4
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Zhang Z, Liu X, Gao L, Qi J, Xing C. Biological Hybrid Systems Based on Photocatalysts to Drive the Conversion of CO 2 into High-Value Compounds. ACS APPLIED BIO MATERIALS 2025; 8:2735-2750. [PMID: 40165745 DOI: 10.1021/acsabm.5c00165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Artificial photosynthetic biohybrid systems possess the remarkable ability not only to convert solar energy into chemical energy but also to store this energy in the form of organic matter. By leveraging this system, we hold the promise of achieving sustainable energy utilization and chemical production. This review comprehensively summarizes artificial photosynthetic biohybrid systems consisting of metal sulfides, noble metals, quantum dots, composite photocatalysts, and conjugated polymers of organic semiconductor materials with microorganisms and provides a comprehensive overview of examples of artificial photosynthetic biohybrid systems converting CO2 into high-value compounds and a summary of the relevant devices that are currently available. Additionally, the review discusses the challenges and future development trends related to artificial photosynthetic biohybrid systems.
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Affiliation(s)
- Ziyi Zhang
- National-Local Joint Engineering Laboratory for Energy Conservation in Chemical Process Integration and Resources Utilization, School of Chemical Engineering and Technology, Hebei University of Technology, Tianjin 300131, P. R. China
| | - Xinyue Liu
- National-Local Joint Engineering Laboratory for Energy Conservation in Chemical Process Integration and Resources Utilization, School of Chemical Engineering and Technology, Hebei University of Technology, Tianjin 300131, P. R. China
| | - Longxuan Gao
- National-Local Joint Engineering Laboratory for Energy Conservation in Chemical Process Integration and Resources Utilization, School of Chemical Engineering and Technology, Hebei University of Technology, Tianjin 300131, P. R. China
| | - Junjie Qi
- National-Local Joint Engineering Laboratory for Energy Conservation in Chemical Process Integration and Resources Utilization, School of Chemical Engineering and Technology, Hebei University of Technology, Tianjin 300131, P. R. China
| | - Chengfen Xing
- School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300401, P. R. China
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Böer T, Rosenbaum FP, Eysell L, Müller V, Daniel R, Poehlein A. Isolation and characterization of Sporomusa carbonis sp. nov.: a carboxydotrophic hydrogenogen in the genus of Sporomusa isolated from a charcoal-burning pile. Int J Syst Evol Microbiol 2025; 75:006677. [PMID: 40237743 PMCID: PMC12003927 DOI: 10.1099/ijsem.0.006677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Accepted: 01/31/2025] [Indexed: 04/18/2025] Open
Abstract
A Gram-negative bacterial strain, designated ACPtT, was isolated from the top of the covering soil of an active charcoal-burning pile. The cells of ACPtT were strictly anaerobic, rod-shaped and grew optimally at 40 °C and pH 7. The substrates ribose, glucose, sucrose, raffinose, melezitose, pyruvate, vanillate, syringate, methanol and CO were utilized for growth. Phylogenomic analysis of the 4.1 Mb genome showed that strain ACPtT represented a novel species of the genus Sporomusa. The most closely related species to ACPtT was Sporomusa malonica, with an average amino acid identity of 80.1%. The genome of ACPtT encoded cytochromes, ubiquinones, the Wood-Ljungdahl gene cluster and an Rnf complex, which were identified as common features of all Sporomusa type strains. However, strain ACPtT did not ferment H2+CO2 via acetogenesis as other Sporomusa species but employed the metabolism of a carboxydotrophic hydrogenogen, converting CO to H2+CO2. Based on the genomic, morphological and physiological features presented in this study, strain ACPtT is proposed as a novel species in the genus Sporomusa, with the name Sporomusa carbonis sp. nov. (DSM 116159T and CCOS 2105T).
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Affiliation(s)
- Tim Böer
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University, Göttingen, Germany
| | - Florian P. Rosenbaum
- Department of Molecular Microbiology & Bioenergetics, Institute of Molecular Biosciences, Johann Wolfgang Goethe University, Frankfurt, Germany
| | - Lena Eysell
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University, Göttingen, Germany
| | - Volker Müller
- Department of Molecular Microbiology & Bioenergetics, Institute of Molecular Biosciences, Johann Wolfgang Goethe University, Frankfurt, Germany
| | - Rolf Daniel
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University, Göttingen, Germany
| | - Anja Poehlein
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University, Göttingen, Germany
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6
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Burns C, Gibson EA, Fuller L, Kalathil S. Powering the Future: Unveiling the Secrets of Semiconductor Biointerfaces in Biohybrids for Semiartificial Photosynthesis. ARTIFICIAL PHOTOSYNTHESIS (WASHINGTON, D.C.) 2025; 1:27-49. [PMID: 40200990 PMCID: PMC11783821 DOI: 10.1021/aps.4c00008] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Revised: 08/09/2024] [Accepted: 08/13/2024] [Indexed: 04/10/2025]
Abstract
Developing technology for sustainable chemical and fuel production is a key focus of scientific research. Semiartificial photosynthesis is a promising approach, pairing "electric microbes" with artificial light absorbers (semiconductors) to convert N2, CO2, and water into value-added products using sunlight. Mimicking natural photosynthesis is done with semiconductors acting as electron donors or sinks for microbes. This method enables the production of multicarbon (C2+) chemicals (e.g., ethanol and caproic acid) and ammonia with high efficiency and selectivity. Despite significant progress, commercial-scale applications remain elusive due to fundamental challenges. This Review covers advances in semiartificial photosynthesis and highlights that there is no clear mechanistic understanding underpinning the production of chemicals using the combination of light, semiconductors, and microbes. Does the mechanism rely on H2 uptake, do the microbes eat electrons directly from the light absorbers, or is it a combination of both? It focuses on overcoming bottlenecks using advanced spectroscopy, microscopy, and synthetic biology tools to study charge transfer kinetics between microbial cell membranes and semiconductors. Understanding this interaction is crucial for increasing solar-to-chemical (STC) efficiencies, necessary for industrial use. This Review also outlines future research directions and techniques to advance this field, aiming to achieve net-zero climate goals through multidisciplinary efforts.
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Affiliation(s)
- Cathal Burns
- Hub
for Biotechnology in the Built Environment, Faculty of Health and
Life Sciences, Department of Applied Sciences, Northumbria University, Newcastle NE1 8ST, United
Kingdom
- Energy
Materials Laboratory, Chemistry, School of Natural and Environmental
Science, Newcastle University, Newcastle upon Tyne NE1
7RU, United Kingdom
| | - Elizabeth A Gibson
- Energy
Materials Laboratory, Chemistry, School of Natural and Environmental
Science, Newcastle University, Newcastle upon Tyne NE1
7RU, United Kingdom
| | - Linsey Fuller
- Procter
and Gamble Company, Procter and Gamble Innovation Centre, Newcastle upon Tyne NE12
9TS, United Kingdom
| | - Shafeer Kalathil
- Hub
for Biotechnology in the Built Environment, Faculty of Health and
Life Sciences, Department of Applied Sciences, Northumbria University, Newcastle NE1 8ST, United
Kingdom
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7
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Hou N, Tong Y, Zhou M, Li X, Sun X, Li D. New Strategies for constructing and analyzing semiconductor photosynthetic biohybrid systems based on ensemble Machine learning Models: Visualizing complex mechanisms and yield prediction. BIORESOURCE TECHNOLOGY 2024; 412:131404. [PMID: 39222858 DOI: 10.1016/j.biortech.2024.131404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 08/28/2024] [Accepted: 08/30/2024] [Indexed: 09/04/2024]
Abstract
Photosynthetic biohybrid systems (PBSs) composed of semiconductor-microbial hybrids provide a novel approach for converting light into chemical energy. However, comprehending the intricate interactions between materials and microbes that lead to PBSs with high apparent quantum yields (AQY) is challenging. Machine learning holds promise in predicting these interactions. To address this issue, this study employs ensemble learning (ESL) based on Random Forest, Gradient Boosting Decision Tree, and eXtreme Gradient Boosting to predict AQY of PBSs utilizing a dataset comprising 15 influential factors. The ESL model demonstrates exceptional accuracy and interpretability (R2 value of 0.927), offering insights into the impact of these factors on AQY while facilitating the selection of efficient semiconductors. Furthermore, this research propose that efficient charge carrier separation and transfer at the bio-abiotic interface are crucial for achieving high AQY levels. This research provides guidance for selecting semiconductors suitable for productive PBSs while elucidating mechanisms underlying their enhanced efficiency.
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Affiliation(s)
- Ning Hou
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Yi Tong
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Mingwei Zhou
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Xianyue Li
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China
| | - Xiping Sun
- Grainger College of Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61820, USA
| | - Dapeng Li
- College of Resources and Environment, Northeast Agricultural University, Harbin 150030, Heilongjiang, PR China.
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8
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Hu J, Zeng C, Liu G, Luo H. Nitrogen-doped carbon dots boost microbial electrosynthesis via efficient extracellular electron uptake of acetogens. BIORESOURCE TECHNOLOGY 2024; 412:131390. [PMID: 39222860 DOI: 10.1016/j.biortech.2024.131390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2024] [Revised: 08/23/2024] [Accepted: 08/28/2024] [Indexed: 09/04/2024]
Abstract
This study investigated the molecular mechanism behind the highly efficient performance of nitrogen-doped carbon dots (NCDs)-assisted microbial electrosynthesis systems (MESs). The impact of NCDs (C:N precursor = 1:0.5-1:3) on acetogens was examined in the biocathode. The highest electrocatalytic performance was observed with NCDs1:1. The maximum acetate production rate of 1.9 ± 0.1 mM d-1 was achieved in NCDs1:1-modified MESs, which was 26.7-216.7 % higher than other MESs (0.6-1.5 mM d-1). With NCDs1:1 modified, the biocathode exhibited a 129.3-186.8 % increase in the abundance of Sporomusa, and 38.5-104.6 % increase in cytochrome expression (cydAB, cybH). Transcriptome confirmed that cytochromes played a crucial role in the extracellular electron uptake (EEU) of NCDs1:1-modified Sporomusa. NCDs1:1 enhanced EEU efficiency, thereby increasing the two H+-pumping steps and accelerating microbial CO2 fixation. These results provide valuable insights into increasing CO2 fixation by maximizing EEU efficiency in acetogens.
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Affiliation(s)
- Jiaping Hu
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China
| | - Cuiping Zeng
- CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Guangli Liu
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China
| | - Haiping Luo
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China.
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9
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Bai R, He Y, Li J, Zhou X, Zhao F. Assembly strategies for microbe-material hybrid systems in solar energy conversion. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 216:109091. [PMID: 39244886 DOI: 10.1016/j.plaphy.2024.109091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 07/27/2024] [Accepted: 09/02/2024] [Indexed: 09/10/2024]
Abstract
Microbe-material hybrid systems which facilitate the solar-driven synthesis of high-value chemicals, harness the unique capabilities of microbes, maintaining the high-selectivity catalytic abilities, while concurrently incorporating exogenous materials to confer novel functionalities. The effective assembly of both components is essential for the overall functionality of microbe-material hybrid systems. Herein, we conducted a critical review of microbe-material hybrid systems for solar energy conversion focusing on the perspective of interface assembly strategies between microbes and materials, which are categorized into five types: cell uptake, intracellular synthesis, extracellular mineralization, electrostatic adsorption, and cell encapsulation. Moreover, this review elucidates the mechanisms by which microbe-material hybrid systems convert elementary substrates, such as carbon dioxide, nitrogen, and water, into high-value chemicals or materials for energy generation.
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Affiliation(s)
- Rui Bai
- CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yi He
- CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Junpeng Li
- CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
| | - Xudong Zhou
- CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China
| | - Feng Zhao
- CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
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10
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Shen J, Qiao L. Proteomic and metabolic analysis of Moorella thermoacetica-g-C 3N 4 nanocomposite system for artificial photosynthesis. Talanta 2024; 278:126479. [PMID: 38941811 DOI: 10.1016/j.talanta.2024.126479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Revised: 06/18/2024] [Accepted: 06/24/2024] [Indexed: 06/30/2024]
Abstract
Artificial photosynthesis by microbe-semiconductor biohybrid systems has been demonstrated as a valuable strategy in providing sustainable energy and in carbon fixation. However, most of the developed biohybrid systems for light harvesting employ heavy metal materials, especially cadmium sulfide (CdS), which normally cause environmental pollution and restrict the widespread of the systems. Herein, we constructed an environmentally friendly biohybirid system based on a typical acetogenic bacteria, Moorella thermoacetica, coupling with a carbon-based semiconductor, graphitic carbon nitride (g-C3N4), to realize light-driven carbon fixation. The proposed biohybrid system displayed outstanding acetate productivity with a quantum yield of 2.66 ± 0.43 %. Non-targeted proteomic analysis indicated that the physiological activity of the bacteria was improved, coupling with the non-toxic material. We further proposed the mechanisms of energy generation, electron transfer and CO2 fixation of the irradiated biohybrid system by proteomic and metabolomic characterization. With the photoelectron generated in g-C3N4 under illumination, CO2 is finally converted to acetate via the Wood-Ljungdahl pathway (WLP). Other associated pathways were also proved to be activated, providing extra energy or substrates for acetate production. The study reveals that the future focus of the development of biohybrid systems for light harvesting can be on the metal-free biocompatible material, which can activate the expression of the key enzymes involved in the electron transfer and carbon metabolism under light irradiation.
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Affiliation(s)
- Jiayuan Shen
- Department of Chemistry, and Minhang Hospital, Fudan University, Shanghai, 200000, China
| | - Liang Qiao
- Department of Chemistry, and Minhang Hospital, Fudan University, Shanghai, 200000, China.
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11
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Yang K, Zhao G, Li H, Tian X, Xu L, Yan J, Xie X, Yan Y, Yang M. Modification of Yarrowia lipolytica via metabolic engineering for effective remediation of heavy metals from wastewater. JOURNAL OF HAZARDOUS MATERIALS 2024; 476:134954. [PMID: 38936184 DOI: 10.1016/j.jhazmat.2024.134954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 06/11/2024] [Accepted: 06/16/2024] [Indexed: 06/29/2024]
Abstract
With the increasing demand for heavy metals due to the advancement of industrial activities, large proportions of heavy metals have been discharged into aquatic ecosystems, causing serious harm to human health and the environment. Existing physical and chemical methods for recovering heavy metals from wastewater encounter challenges, such as low efficiency, high processing costs, and potential secondary pollution. In this study, we developed a novel approach by engineering the endogenous sulphur metabolic pathway of Yarrowia lipolytica, providing it with the ability to produce approximately 550 ppm of sulphide. Subsequently, sulphide-producing Y. lipolytica was used for the first time in heavy metal remediation. The engineered strain exhibited a high capacity to remove various heavy metals, especially achieving over 90 % for cadmium (Cd), copper (Cu) and lead (Pb). This capacity was consistent when applied to both synthetic and actual wastewater samples. Microscopic analyses revealed that sulphide-mediated biological precipitation of metal sulphides on the cell surface is responsible for their removal. Our findings demonstrate that sulphide-producing yeasts are a robust and effective bioremediation strategy for heavy metals, showing great potential for future heavy metal pollution remediation practices.
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Affiliation(s)
- Kaixin Yang
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Guowei Zhao
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Huanhuan Li
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Xiaoke Tian
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Li Xu
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Jinyong Yan
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Xiaoman Xie
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China.
| | - Yunjun Yan
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China.
| | - Min Yang
- Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China.
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12
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Bae J, Park C, Jung H, Jin S, Cho BK. Harnessing acetogenic bacteria for one-carbon valorization toward sustainable chemical production. RSC Chem Biol 2024; 5:812-832. [PMID: 39211478 PMCID: PMC11353040 DOI: 10.1039/d4cb00099d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Accepted: 07/06/2024] [Indexed: 09/04/2024] Open
Abstract
The pressing climate change issues have intensified the need for a rapid transition towards a bio-based circular carbon economy. Harnessing acetogenic bacteria as biocatalysts to convert C1 compounds such as CO2, CO, formate, or methanol into value-added multicarbon chemicals is a promising solution for both carbon capture and utilization, enabling sustainable and green chemical production. Recent advances in the metabolic engineering of acetogens have expanded the range of commodity chemicals and biofuels produced from C1 compounds. However, producing energy-demanding high-value chemicals on an industrial scale from C1 substrates remains challenging because of the inherent energetic limitations of acetogenic bacteria. Therefore, overcoming this hurdle is necessary to scale up the acetogenic C1 conversion process and realize a circular carbon economy. This review overviews the acetogenic bacteria and their potential as sustainable and green chemical production platforms. Recent efforts to address these challenges have focused on enhancing the ATP and redox availability of acetogens to improve their energetics and conversion performances. Furthermore, promising technologies that leverage low-cost, sustainable energy sources such as electricity and light are discussed to improve the sustainability of the overall process. Finally, we review emerging technologies that accelerate the development of high-performance acetogenic bacteria suitable for industrial-scale production and address the economic sustainability of acetogenic C1 conversion. Overall, harnessing acetogenic bacteria for C1 valorization offers a promising route toward sustainable and green chemical production, aligning with the circular economy concept.
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Affiliation(s)
- Jiyun Bae
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
| | - Chanho Park
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
| | - Hyunwoo Jung
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
| | - Sangrak Jin
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
| | - Byung-Kwan Cho
- Department of Biological Sciences, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
- KAIST Institute for the BioCentury, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
- Graduate School of Engineering Biology, Korea Advanced Institute of Science and Technology Daejeon 34141 Republic of Korea
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13
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Liang J, Xiao K, Wang X, Hou T, Zeng C, Gao X, Wang B, Zhong C. Revisiting Solar Energy Flow in Nanomaterial-Microorganism Hybrid Systems. Chem Rev 2024; 124:9081-9112. [PMID: 38900019 DOI: 10.1021/acs.chemrev.3c00831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Nanomaterial-microorganism hybrid systems (NMHSs), integrating semiconductor nanomaterials with microorganisms, present a promising platform for broadband solar energy harvesting, high-efficiency carbon reduction, and sustainable chemical production. While studies underscore its potential in diverse solar-to-chemical energy conversions, prevailing NMHSs grapple with suboptimal energy conversion efficiency. Such limitations stem predominantly from an insufficient systematic exploration of the mechanisms dictating solar energy flow. This review provides a systematic overview of the notable advancements in this nascent field, with a particular focus on the discussion of three pivotal steps of energy flow: solar energy capture, cross-membrane energy transport, and energy conversion into chemicals. While key challenges faced in each stage are independently identified and discussed, viable solutions are correspondingly postulated. In view of the interplay of the three steps in affecting the overall efficiency of solar-to-chemical energy conversion, subsequent discussions thus take an integrative and systematic viewpoint to comprehend, analyze and improve the solar energy flow in the current NMHSs of different configurations, and highlighting the contemporary techniques that can be employed to investigate various aspects of energy flow within NMHSs. Finally, a concluding section summarizes opportunities for future research, providing a roadmap for the continued development and optimization of NMHSs.
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Affiliation(s)
- Jun Liang
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Kemeng Xiao
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xinyu Wang
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Tianfeng Hou
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Cuiping Zeng
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xiang Gao
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Bo Wang
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Chao Zhong
- Key Laboratory of Quantitative Synthetic Biology, Center for Materials Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
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14
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Bishara Robertson IL, Zhang H, Reisner E, Butt JN, Jeuken LJC. Engineering of bespoke photosensitiser-microbe interfaces for enhanced semi-artificial photosynthesis. Chem Sci 2024; 15:9893-9914. [PMID: 38966358 PMCID: PMC11220614 DOI: 10.1039/d4sc00864b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Accepted: 05/20/2024] [Indexed: 07/06/2024] Open
Abstract
Biohybrid systems for solar fuel production integrate artificial light-harvesting materials with biological catalysts such as microbes. In this perspective, we discuss the rational design of the abiotic-biotic interface in biohybrid systems by reviewing microbes and synthetic light-harvesting materials, as well as presenting various approaches to coupling these two components together. To maximise performance and scalability of such semi-artificial systems, we emphasise that the interfacial design requires consideration of two important aspects: attachment and electron transfer. It is our perspective that rational design of this photosensitiser-microbe interface is required for scalable solar fuel production. The design and assembly of a biohybrid with a well-defined electron transfer pathway allows mechanistic characterisation and optimisation for maximum efficiency. Introduction of additional catalysts to the system can close the redox cycle, omitting the need for sacrificial electron donors. Studies that electronically couple light-harvesters to well-defined biological entities, such as emerging photosensitiser-enzyme hybrids, provide valuable knowledge for the strategic design of whole-cell biohybrids. Exploring the interactions between light-harvesters and redox proteins can guide coupling strategies when translated into larger, more complex microbial systems.
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Affiliation(s)
| | - Huijie Zhang
- Leiden Institute of Chemistry, Leiden University PO Box 9502 Leiden 2300 RA the Netherlands
| | - Erwin Reisner
- Yusuf Hamied Department of Chemistry, University of Cambridge Cambridge CB2 1EW UK
| | - Julea N Butt
- School of Chemistry and School of Biological Sciences, University of East Anglia Norwich Research Park Norwich NR4 7TJ UK
| | - Lars J C Jeuken
- Leiden Institute of Chemistry, Leiden University PO Box 9502 Leiden 2300 RA the Netherlands
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15
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Li J, Shen J, Hou T, Tang H, Zeng C, Xiao K, Hou Y, Wang B. A Self-Assembled MOF-Escherichia Coli Hybrid System for Light-Driven Fuels and Valuable Chemicals Synthesis. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2308597. [PMID: 38664984 PMCID: PMC11220693 DOI: 10.1002/advs.202308597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 02/25/2024] [Indexed: 07/04/2024]
Abstract
The development of semi-artificial photosynthetic systems, which integrate metal-organic frameworks (MOFs) with industrial microbial cell factories for light-driven synthesis of fuels and valuable chemicals, represents a highly promising avenue for both research advancements and practical applications. In this study, an MOF (PCN-222) utilizing racemic-(4-carboxyphenyl) porphyrin and zirconium chloride (ZrCl4) as primary constituents is synthesized. Employing a self-assembly process, a hybrid system is constructed, integrating engineered Escherichia coli (E. coli) to investigate light-driven hydrogen and lysine production. These results demonstrate that the light-irradiated biohybrid system efficiently produce H2 with a quantum efficiency of 0.75% under full spectrum illumination, the elevated intracellular reducing power NADPH is also observed. By optimizing the conditions, the biohybrid system achieves a maximum lysine production of 18.25 mg L-1, surpassing that of pure bacteria by 332%. Further investigations into interfacial electron transfer mechanisms reveals that PCN-222 efficiently captures light and facilitates the transfer of photo-generated electrons into E. coli cells. It is proposed that the interfacial energy transfer process is mediated by riboflavin, with facilitation by secreted small organic acids acting as hole scavengers for PCN-222. This study establishes a crucial foundation for future research into the light-driven biomanufacturing using E. coli-based hybrid systems.
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Affiliation(s)
- Jialu Li
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
- School of ResourcesEnvironment and MaterialsGuangxi UniversityNanning530004China
| | - Junfeng Shen
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Tianfeng Hou
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Hongting Tang
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Cuiping Zeng
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
| | - Kemeng Xiao
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
- Department of Chemistry and Center for Cell and Developmental BiologyThe Chinese University of Hong KongShatinHong Kong999077China
| | - Yanping Hou
- School of ResourcesEnvironment and MaterialsGuangxi UniversityNanning530004China
| | - Bo Wang
- CAS Key Laboratory of Quantitative Engineering BiologyShenzhen Institute of Synthetic BiologyShenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen518055China
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16
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Zhang J, Li F, Liu D, Liu Q, Song H. Engineering extracellular electron transfer pathways of electroactive microorganisms by synthetic biology for energy and chemicals production. Chem Soc Rev 2024; 53:1375-1446. [PMID: 38117181 DOI: 10.1039/d3cs00537b] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2023]
Abstract
The excessive consumption of fossil fuels causes massive emission of CO2, leading to climate deterioration and environmental pollution. The development of substitutes and sustainable energy sources to replace fossil fuels has become a worldwide priority. Bio-electrochemical systems (BESs), employing redox reactions of electroactive microorganisms (EAMs) on electrodes to achieve a meritorious combination of biocatalysis and electrocatalysis, provide a green and sustainable alternative approach for bioremediation, CO2 fixation, and energy and chemicals production. EAMs, including exoelectrogens and electrotrophs, perform extracellular electron transfer (EET) (i.e., outward and inward EET), respectively, to exchange energy with the environment, whose rate determines the efficiency and performance of BESs. Therefore, we review the synthetic biology strategies developed in the last decade for engineering EAMs to enhance the EET rate in cell-electrode interfaces for facilitating the production of electricity energy and value-added chemicals, which include (1) progress in genetic manipulation and editing tools to achieve the efficient regulation of gene expression, knockout, and knockdown of EAMs; (2) synthetic biological engineering strategies to enhance the outward EET of exoelectrogens to anodes for electricity power production and anodic electro-fermentation (AEF) for chemicals production, including (i) broadening and strengthening substrate utilization, (ii) increasing the intracellular releasable reducing equivalents, (iii) optimizing c-type cytochrome (c-Cyts) expression and maturation, (iv) enhancing conductive nanowire biosynthesis and modification, (v) promoting electron shuttle biosynthesis, secretion, and immobilization, (vi) engineering global regulators to promote EET rate, (vii) facilitating biofilm formation, and (viii) constructing cell-material hybrids; (3) the mechanisms of inward EET, CO2 fixation pathway, and engineering strategies for improving the inward EET of electrotrophic cells for CO2 reduction and chemical production, including (i) programming metabolic pathways of electrotrophs, (ii) rewiring bioelectrical circuits for enhancing inward EET, and (iii) constructing microbial (photo)electrosynthesis by cell-material hybridization; (4) perspectives on future challenges and opportunities for engineering EET to develop highly efficient BESs for sustainable energy and chemical production. We expect that this review will provide a theoretical basis for the future development of BESs in energy harvesting, CO2 fixation, and chemical synthesis.
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Affiliation(s)
- Junqi Zhang
- Frontier Science Center for Synthetic Biology (Ministry of Education), Key Laboratory of Systems Bioengineering, and School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
| | - Feng Li
- Frontier Science Center for Synthetic Biology (Ministry of Education), Key Laboratory of Systems Bioengineering, and School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
| | - Dingyuan Liu
- Frontier Science Center for Synthetic Biology (Ministry of Education), Key Laboratory of Systems Bioengineering, and School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
| | - Qijing Liu
- Frontier Science Center for Synthetic Biology (Ministry of Education), Key Laboratory of Systems Bioengineering, and School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
| | - Hao Song
- Frontier Science Center for Synthetic Biology (Ministry of Education), Key Laboratory of Systems Bioengineering, and School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
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17
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Tremblay PL, Zhang T. Genetic tools for the electrotroph Sporomusa ovata and autotrophic biosynthesis. Appl Environ Microbiol 2024; 90:e0175723. [PMID: 38117058 PMCID: PMC10807461 DOI: 10.1128/aem.01757-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 11/13/2023] [Indexed: 12/21/2023] Open
Abstract
Sporomusa ovata is a Gram-negative acetogen of the Sporomusaceae family with a unique physiology. This anerobic bacterium is a core microbial catalyst for advanced CO2-based biotechnologies including gas fermentation, microbial electrosynthesis, and hybrid photosystem. Until now, no genetic tools exist for S. ovata, which is a critical obstacle to its optimization as an autotrophic chassis and the acquisition of knowledge about its metabolic capacities. Here, we developed an electroporation protocol for S. ovata. With this procedure, it became possible to introduce replicative plasmids such as pJIR751 and its derivatives into the acetogen. This system was then employed to demonstrate the feasibility of heterologous expression by introducing a functional β-glucuronidase enzyme under the promoters of different strengths in S. ovata. Next, a recombinant S. ovata strain producing the non-native product acetone both from an organic carbon substrate and from CO2 was constructed. Finally, a replicative plasmid capable of integrating itself on the chromosome of the acetogen was developed as a tool for genome editing, and gene deletion was demonstrated. These results indicate that S. ovata can be engineered and provides a first-generation genetic toolbox for the optimization of this biotechnological workhorse.IMPORTANCES. ovata harbors unique features that make it outperform most microbes for autotrophic biotechnologies such as a capacity to acquire electrons from different solid donors, a low H2 threshold, and efficient energy conservation mechanisms. The development of the first-generation genetic instruments described in this study is a key step toward understanding the molecular mechanisms involved in these outstanding metabolic and physiological characteristics. In addition, these tools enable the construction of recombinant S. ovata strains that can synthesize a wider range of products in an efficient manner.
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Affiliation(s)
- Pier-Luc Tremblay
- School of Chemistry, Chemical Engineering, and Life Science, Wuhan University of Technology, Wuhan, China
- Institut WUT-AMU, Wuhan University of Technology, Wuhan, China
- Shaoxing Institute for Advanced Research, Wuhan University of Technology, Shaoxing, China
- Sanya Science and Education Innovation Park, Wuhan University of Technology, Sanya, China
| | - Tian Zhang
- School of Chemistry, Chemical Engineering, and Life Science, Wuhan University of Technology, Wuhan, China
- Institut WUT-AMU, Wuhan University of Technology, Wuhan, China
- Shaoxing Institute for Advanced Research, Wuhan University of Technology, Shaoxing, China
- Sanya Science and Education Innovation Park, Wuhan University of Technology, Sanya, China
- Advanced Engineering Technology Research Institute of Zhongshan City, Wuhan University of Technology, Zhongshan, China
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18
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Xie Y, Erşan S, Guan X, Wang J, Sha J, Xu S, Wohlschlegel JA, Park JO, Liu C. Unexpected metabolic rewiring of CO 2 fixation in H 2-mediated materials-biology hybrids. Proc Natl Acad Sci U S A 2023; 120:e2308373120. [PMID: 37816063 PMCID: PMC10589654 DOI: 10.1073/pnas.2308373120] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 08/31/2023] [Indexed: 10/12/2023] Open
Abstract
A hybrid approach combining water-splitting electrochemistry and H2-oxidizing, CO2-fixing microorganisms offers a viable solution for producing value-added chemicals from sunlight, water, and air. The classic wisdom without thorough examination to date assumes that the electrochemistry in such a H2-mediated process is innocent of altering microbial behavior. Here, we report unexpected metabolic rewiring induced by water-splitting electrochemistry in H2-oxidizing acetogenic bacterium Sporomusa ovata that challenges such a classic view. We found that the planktonic S. ovata is more efficient in utilizing reducing equivalent for ATP generation in the materials-biology hybrids than cells grown with H2 supply, supported by our metabolomic and proteomic studies. The efficiency of utilizing reducing equivalents and fixing CO2 into acetate has increased from less than 80% of chemoautotrophy to more than 95% under electroautotrophic conditions. These observations unravel previously underappreciated materials' impact on microbial metabolism in seemingly simply H2-mediated charge transfer between biotic and abiotic components. Such a deeper understanding of the materials-biology interface will foster advanced design of hybrid systems for sustainable chemical transformation.
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Affiliation(s)
- Yongchao Xie
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA90095
| | - Sevcan Erşan
- Department of Chemical and Biomolecular Engineering, University of California, Los Angeles, CA90095
| | - Xun Guan
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA90095
| | - Jingyu Wang
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA90095
| | - Jihui Sha
- Department of Biological Chemistry, University of California, Los Angeles, CA90095
| | - Shuangning Xu
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA90095
| | | | - Junyoung O. Park
- Department of Chemical and Biomolecular Engineering, University of California, Los Angeles, CA90095
- California NanoSystems Institute, University of California, Los Angeles, CA90095
| | - Chong Liu
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA90095
- California NanoSystems Institute, University of California, Los Angeles, CA90095
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19
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Shen J, Liu Y, Qiao L. Photodriven Chemical Synthesis by Whole-Cell-Based Biohybrid Systems: From System Construction to Mechanism Study. ACS APPLIED MATERIALS & INTERFACES 2023; 15:6235-6259. [PMID: 36702806 DOI: 10.1021/acsami.2c19528] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
By simulating natural photosynthesis, the desirable high-value chemical products and clean fuels can be sustainably generated with solar energy. Whole-cell-based photosensitized biohybrid system, which innovatively couples the excellent light-harvesting capacity of semiconductor materials with the efficient catalytic ability of intracellular biocatalysts, is an appealing interdisciplinary creature to realize photodriven chemical synthesis. In this review, we summarize the constructed whole-cell-based biohybrid systems in different application fields, including carbon dioxide fixation, nitrogen fixation, hydrogen production, and other chemical synthesis. Moreover, we elaborate the charge transfer mechanism studies of representative biohybrids, which can help to deepen the current understanding of the synergistic process between photosensitizers and microorganisms, and provide schemes for building novel biohybrids with less electron transfer resistance, advanced productive efficiency, and functional diversity. Further exploration in this field has the prospect of making a breakthrough on the biotic-abiotic interface that will provide opportunities for multidisciplinary research.
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Affiliation(s)
- Jiayuan Shen
- Department of Chemistry, and Shanghai Stomatological Hospital, Fudan University, Shanghai 200000, China
| | - Yun Liu
- Department of Chemistry, and Shanghai Stomatological Hospital, Fudan University, Shanghai 200000, China
| | - Liang Qiao
- Department of Chemistry, and Shanghai Stomatological Hospital, Fudan University, Shanghai 200000, China
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20
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Yu W, Pavliuk MV, Liu A, Zeng Y, Xia S, Huang Y, Bai H, Lv F, Tian H, Wang S. Photosynthetic Polymer Dots-Bacteria Biohybrid System Based on Transmembrane Electron Transport for Fixing CO 2 into Poly-3-hydroxybutyrate. ACS APPLIED MATERIALS & INTERFACES 2023; 15:2183-2191. [PMID: 36563111 DOI: 10.1021/acsami.2c18831] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Organic semiconductor-microbial photosynthetic biohybrid systems show great potential in light-driven biosynthesis. In such a system, an organic semiconductor is used to harvest solar energy and generate electrons, which can be further transported to microorganisms with a wide range of metabolic pathways for final biosynthesis. However, the lack of direct electron transport proteins in existing microorganisms hinders the hybrid system of photosynthesis. In this work, we have designed a photosynthetic biohybrid system based on transmembrane electron transport that can effectively deliver the electrons from organic semiconductor across the cell wall to the microbe. Biocompatible organic semiconductor polymer dots (Pdots) are used as photosensitizers to construct a ternary synergistic biochemical factory in collaboration with Ralstonia eutropha H16 (RH16) and electron shuttle neutral red (NR). Photogenerated electrons from Pdots promote the proportion of nicotinamide adenine dinucleotide phosphate (NADPH) through NR, driving the Calvin cycle of RH16 to convert CO2 into poly-3-hydroxybutyrate (PHB), with a yield of 21.3 ± 3.78 mg/L, almost 3 times higher than that of original RH16. This work provides a concept of an integrated photoactive biological factory based on organic semiconductor polymer dots/bacteria for valuable chemical production only using solar energy as the energy input.
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Affiliation(s)
- Wen Yu
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
- College of Chemistry, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Mariia V Pavliuk
- Department of Chemistry - Ångström Laboratory, Physical Chemistry, Uppsala University, Uppsala 75120, Sweden
| | - Aijie Liu
- Department of Chemistry - Ångström Laboratory, Physical Chemistry, Uppsala University, Uppsala 75120, Sweden
| | - Yue Zeng
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Shengpeng Xia
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
- College of Chemistry, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Yiming Huang
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Haotian Bai
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Fengting Lv
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
| | - Haining Tian
- Department of Chemistry - Ångström Laboratory, Physical Chemistry, Uppsala University, Uppsala 75120, Sweden
| | - Shu Wang
- Beijing National Laboratory for Molecular Sciences, Key Laboratory of Organic Solids, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China
- College of Chemistry, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
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21
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Hou X, Hu X. Self-Assembled Nanoscale Manganese Oxides Enhance Carbon Capture by Diatoms. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:17215-17226. [PMID: 36375171 DOI: 10.1021/acs.est.2c04500] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Continuous CO2 emissions from human activities increase atmospheric CO2 concentrations and affect global climate change. The carbon storage capacity of the ocean is 20-fold higher than that of the land, and diatoms contribute to approximately 40% of carbon capture in the ocean. Manganese (Mn) is a major driver of marine phytoplankton growth and the marine carbon pump. Here, we discovered self-assembled manganese oxides (MnOx) for CO2 fixation in a diatom-based biohybrid system. MnOx shared key features (e.g., di-μ-oxo-bridged Mn-Mn) with the Mn4CaO5 cluster of the biological catalyst in photosystem II and promoted photosynthesis and carbon capture by diatoms/MnOx. The CO2 capture capacity of diatoms/MnOx was 1.5-fold higher than that of diatoms alone. Diatoms/MnOx easily allocated carbon into proteins and lipids instead of carbohydrates. Metabolomics showed that the contents of several metabolites (e.g., lysine and inositol) were positively associated with increased CO2 capture. Diatoms/MnOx upregulated six genes encoding photosynthesis core proteins and a key rate-limiting enzyme (Rubisco, ribulose 1,5-bisphosphate carboxylase-oxygenase) in the Calvin-Benson-Bassham carbon assimilation cycle, revealing the link between MnOx and photosynthesis. These findings provide a route for offsetting anthropogenic CO2 emissions and inspiration for self-assembled biohybrid systems for carbon capture by marine phytoplankton.
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Affiliation(s)
- Xuan Hou
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education)/Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin300350, China
| | - Xiangang Hu
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education)/Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering, Nankai University, Tianjin300350, China
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