1
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Ueno R, Hirano S, Takaya J. Pyrrolidine synthesis via ring contraction of pyridines. Nat Commun 2025; 16:2426. [PMID: 40082412 PMCID: PMC11906765 DOI: 10.1038/s41467-025-57527-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2024] [Accepted: 02/24/2025] [Indexed: 03/16/2025] Open
Abstract
A ring contraction of easily available cyclic compounds to smaller cycles that are valuable but difficult to synthetically access is one of important skeletal editing strategies. Pyrrolidine synthesis via a ring contraction of pyridines, which are abundant, cheap, and readily available bulk chemicals in chemical industry, is highly promising to accelerate drug discovery and development research due to the great demand of pyrrolidine skeletons in medicinal molecules. Herein we report a photo-promoted ring contraction of pyridines with silylborane to afford pyrrolidine derivatives bearing a 2-azabicyclo[3.1.0]hex-3-ene skeleton. The reaction demonstrates broad substrate scope with high functional group compatibility, realizing facile access to 6-silyl-2-azabicyclo[3.1.0]hex-3-ene derivatives that work as powerful synthons for the synthesis of functionalized pyrrolidines and nitrogen-containing compounds. The reaction mechanism is clarified to proceed via 2-silyl-1,2-dihydropyridine and vinylazomethine ylide as intermediates, which are connected via photochemical or thermal silyl migration.
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Affiliation(s)
- Ryoga Ueno
- Department of Chemistry, School of Science, Tokyo Institute of Technology, Tokyo, Japan
| | - Shohei Hirano
- Department of Chemistry, School of Science, Tokyo Institute of Technology, Tokyo, Japan
| | - Jun Takaya
- Division of Chemistry, Department of Material Engineering Science, Graduate School of Engineering Science, Osaka University, Osaka, Japan.
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2
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Trotsko N, Miroslaw B, Jasiński R, Długosz M, Sadczuk M, Demchuk OM. Efficient Method of ( S)-Nicotine Synthesis. Molecules 2024; 29:5731. [PMID: 39683890 DOI: 10.3390/molecules29235731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2024] [Revised: 11/27/2024] [Accepted: 12/02/2024] [Indexed: 12/18/2024] Open
Abstract
Improved methods for the synthesis of nicotine are of great importance due to the wide range of applications of synthetic nicotine, which is free from contamination with nitrosamines. Herein, we present a four-step chemical synthesis of (S)-nicotine, involving the reduction in myosmine, enantiomeric separation of nornicotine, and subsequent methylation of the appropriate enantiomer of nornicotine obtained. The reduction in myosmine was investigated using both electrochemical and chemical approaches, achieving up to 90% yields of pure nornicotine. To achieve the enantioseparation of nornicotine, its diastereomeric salts with chiral acids, specifically, N-lauroyl-(R)-alanine, were obtained in a mixture of methyl tert-butyl ether (MTBE) and chloroform, which led to the isolation of (S)-nornicotine with 92% ee. The structures of the obtained salts were determined by the X-ray diffraction (XRD) technique, which helped to explain the origin of enantiodiscrimination during the crystallization. The described methodology allows efficient regeneration of the reagents and solvents used, leading to cost-effective production of (S)-nicotine suitable for industrial-scale applications.
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Affiliation(s)
- Nazar Trotsko
- Department of Organic Chemistry, Medical University of Lublin, Witolda Chodźki 4A, 20-093 Lublin, Poland
| | - Barbara Miroslaw
- Department of General and Coordination Chemistry and Crystallography, Institute of Chemical Sciences, Faculty of Chemistry, Maria Curie-Sklodowska University in Lublin, Marii Skłodowskiej-Curie, 2, 20-031 Lublin, Poland
| | - Radomir Jasiński
- Department of Organic Chemistry and Technology, University of Technology in Cracow, Warszawska 24, 31-155 Kraków, Poland
| | | | - Małgorzata Sadczuk
- Chair and Department of Synthesis and Chemical Technology of Pharmaceutical Substances, Medical University of Lublin, Witolda Chodźki 4A, 20-093 Lublin, Poland
| | - Oleg M Demchuk
- Faculty of Medicine, The John Paul II Catholic University of Lublin, Konstantynów 1J/4.03, 20-708 Lublin, Poland
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3
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Chen C, Hao HT, Li MQ, Ma YQ, Ding HM. Dissociation of Nicotine from Acetylcholine-Binding Protein under Terahertz Waves Radiation. J Phys Chem B 2024; 128:9669-9679. [PMID: 39327873 DOI: 10.1021/acs.jpcb.4c03755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/28/2024]
Abstract
The binding of nicotine (NCT) to acetylcholine-binding protein (AChBP) plays an important role in synaptic transmission and neurotransmitter regulation. However, effectively regulating their binding or dissociation processes remains a challenging problem. In this study, we employed all-atom molecular dynamics (MD) simulations to systematically investigate the impact of external terahertz (THz) waves on the binding kinetics between AChBP and NCT. We first identified the key residues (i.e., W143) and the key interactions (i.e., hydrogen bonding and cation-π interaction) in AChBP-NCT binding without THz waves. We then investigated the binding and dissociation of charged NCT with AChBP at three different frequencies (i.e., 13.02, 21.44, 42.55 THz). Importantly, the predominant vibrational modes at 13.02 THz can drive the rotation of the pentagonal ring on NCT. This leads to the disruption of hydrogen bonds between NCT and W143 and a reduced likelihood of forming cation-π interactions, resulting in the dissociation of NCT from AChBP. Additionally, we further investigated the influence of electric field intensities on the dissociation kinetics and found that when the electric field intensity exceeds a critical value (∼0.60 V/nm), the probability of ligand dissociation gradually rises as the intensity increases. In general, this study contributes to a better understanding of the effects of THz waves on protein-ligand interactions, which might also shed some light on potential applications in nicotine addiction treatment and therapeutic strategies for neurodegenerative diseases.
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Affiliation(s)
- Chen Chen
- National Laboratory of Solid State Microstructures and Department of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093, China
| | - Hao-Tian Hao
- National Laboratory of Solid State Microstructures and Department of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093, China
| | - Meng-Qiu Li
- Center for Soft Condensed Matter Physics and Interdisciplinary Research, School of Physical Science and Technology, Soochow University, Suzhou 215006, China
| | - Yu-Qiang Ma
- National Laboratory of Solid State Microstructures and Department of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093, China
| | - Hong-Ming Ding
- Center for Soft Condensed Matter Physics and Interdisciplinary Research, School of Physical Science and Technology, Soochow University, Suzhou 215006, China
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4
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Cocolas A, Lane AM, Musiak BS, Chartier EJ, Bedillion DA, Hejnosz SL, Rohde JJ, Lummis PA, Evanseck JD, Montgomery TD. Diastereoselective [3 + 2] Cycloaddition between Tertiary Amine N-Oxides and Substituted Alkenes to Access 7-Azanorbornanes. Org Lett 2024; 26:6546-6550. [PMID: 39038111 PMCID: PMC11320637 DOI: 10.1021/acs.orglett.4c02013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 07/11/2024] [Accepted: 07/16/2024] [Indexed: 07/24/2024]
Abstract
We have developed a diastereoselective synthesis of 43 novel 7-azanorbornanes using tertiary amine N-oxides and substituted alkenes. Our method uses an efficient [3 + 2] cycloaddition, starting from either commercially available or easily accessible precursors to generate yields up to 97% and diastereomeric ratios up to >20:1. Density functional theory (DFT) calculations were performed, suggesting that the observed diastereoselectivity is likely due to steric considerations.
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Affiliation(s)
- Alexander
H. Cocolas
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Aiden M. Lane
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Benjamin S. Musiak
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Eric J. Chartier
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Derek A. Bedillion
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Sarah L. Hejnosz
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Jeffrey J. Rohde
- Department
of Mathematics and Physical Sciences, Franciscan
University of Steubenville, 1235 University Boulevard, Steubenville, Ohio 43952, United States
| | - Paul A. Lummis
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Jeffrey D. Evanseck
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
| | - Thomas D. Montgomery
- Department
of Chemistry and Biochemistry, Duquesne
University, 600 Forbes Avenue, Pittsburgh, Pennsylvania 15282, United States
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5
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Maity A, Studer A. Intramolecular Radical Amidooxygenation of Alkenes for the Construction of Pyrrolidinones. Org Lett 2024. [PMID: 38814142 DOI: 10.1021/acs.orglett.4c01607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2024]
Abstract
An intramolecular 1,2-amidooxygenation of unactivated alkenes for the construction of the pyrrolidinone scaffold containing a masked 5-hydroxymethyl functionality is reported. γ,δ-Unsaturated N-aryloxyamides react with sodium 2,2,6,6-tetramethylpiperidin-1-olate (TEMPONa) to afford alkoxyaminated pyrrolidinones. The cascade proceeds through reductive amidyl radical generation with TEMPONa, 5-exo cyclization, and TEMPO trapping. No transition metal is required to perform these transformations, and complex (fused, bridged) pyrrolidinones are accessible in moderate to good yields. The product alkoxyamines are readily further converted into ketones and alcohols through either oxidation or reduction.
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Affiliation(s)
- Anirban Maity
- Organisch-Chemisches Institut, Universität Münster, 48149 Münster, Germany
| | - Armido Studer
- Organisch-Chemisches Institut, Universität Münster, 48149 Münster, Germany
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6
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Thasweer AM, Renuka Devi P, Thirunavukkarasu V. Molecular docking and dynamic simulation studies of α4β2 and α7 nicotinic acetylcholine receptors with tobacco smoke constituents nicotine, NNK and NNN. J Biomol Struct Dyn 2023; 41:8462-8471. [PMID: 36270967 DOI: 10.1080/07391102.2022.2135022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 10/06/2022] [Indexed: 10/24/2022]
Abstract
Smoking constitutes a major global health problem. As it triggers various health hazards including cancers, cardiac and pulmonary illness, it is imperative to understand the mechanism of action of various smoke constituents on our cellular processes. Various in vitro studies have compiled the affinity of cigarette smoke constituents on various nicotinic acetylcholine receptors (nAChRs). But the nature of the intermolecular interactions contributing to this affinity and the key amino acids in the receptor active sites involved in this are not investigated so far. Here, we are examining the interaction of α7nAChR and α4β2nAChR on nicotine, 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK) and N-nitrosornicotine (NNN), the physiologically significant constituents in smoke, through molecular docking and dynamics simulations study. The docking of α4β2nAChR structure with the ligands nicotine, NNK and NNN yielded docking scores of -41.45 kcal/mol, -59.28 kcal/mol and -54.60 kcal/mol, respectively, and that of α7nAChR receptor molecule with the ligands yielded docking scores of -59.54 kcal/mol, -71.06 kcal/mol and -70.86 kcal/mol, respectively. The study showed that NNK exhibited the highest affinity with the ligands which was confirmed by dynamics simulation. But higher stability of interactions as surmised from Molecular dynamics simulations was found for nicotine with α4β2nAChR and NNN with α7nAChR. The findings validate the in vitro studies comparing the affinities of these compounds. The study will be useful in formulating effective nAChR agonists to treat neurological disorders and antagonists for smoke deaddiction and improve health standards.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- A M Thasweer
- Department of Biotechnology, Anna University Regional Campus, Coimbatore, Tamil Nadu, India
| | - P Renuka Devi
- Department of Biotechnology, Anna University Regional Campus, Coimbatore, Tamil Nadu, India
| | - Velusamy Thirunavukkarasu
- Department of Biotechnology, School of Biotechnology and Genetic Engineering, Bharathiar University, Coimbatore, Tamil Nadu, India
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7
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Seo N, Jo HY, Lee SG, Kim HJ, Oh MJ, Kim YS, Ro S, Jeon YJ, An HJ. An enhanced LC-MRM-MS platform for sensitive and simultaneous quantification of cyclic imines in shellfish. J Chromatogr B Analyt Technol Biomed Life Sci 2023; 1229:123883. [PMID: 37716343 DOI: 10.1016/j.jchromb.2023.123883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 07/23/2023] [Accepted: 09/05/2023] [Indexed: 09/18/2023]
Abstract
Cyclic imines (CIs) produced by microalgae species and accumulating in the food chain of marine organisms are novel biotoxins that do not belong to the classical group of marine biotoxins. In the past, CIs were found only in limited areas, but in recent years, rapid changes in marine ecosystems have led to widespread CIs, increasing exposure to toxic risks. Monitoring of CIs is therefore required, but still analytically challenging due to the presence of high levels of analogues and interference from other lipophilic substances. Herein, we developed the LC/MRM-MS-based quantitative platform that can selectively enrich for marine-derived CIs and monitor seven CIs simultaneously: pinnatoxin (PnTX E, PnTX F, PnTX G), gymnodimine (GYM A), and spirolide (13-desMe SPX C, 13,19-didesMe SPX C, 20-Me SPX G). In particular, the combination of chromatographic separation by the hydrophobic nature of intrinsic residues of CIs with monitoring of CI structure-specific product ions generated by CID-MS/MS significantly improves the selectivity and sensitivity for quantitative analysis. Indeed, three CIs corresponding to PnTX G, GYM A, and 13-desMe SPX C could be successfully determined at the level of part-per-trillion (ppt) in three species of shellfish collected around the Korean Peninsula. Our analysis revealed that the expression of CIs in the Korean Peninsula was more influenced by the season rather than the species. This analytical platform with high sensitivity can be applied not only to marine biology but also to various other fields requiring CI analysis. Key Contribution: A highly sensitive analytical method for the simultaneous quantitation of cyclic imines based on LC/MRM-MS has been developed.
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Affiliation(s)
- Nari Seo
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea
| | - Hee Young Jo
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea
| | - Sang Gil Lee
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea
| | - Hong Ju Kim
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea
| | - Myung Jin Oh
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea
| | - Young Sang Kim
- Department of Marine Life Sciences, Jeju National University, Jeju Special Self-Governing Province, 63243, Republic of Korea; Marine Science Institute, Jeju National University, Jeju Special Self-Governing Province, 63333, Republic of Korea
| | - Sunil Ro
- Department of Life Science, Merck Ltd. Korea, Seoul, 06178, Republic of Korea
| | - You Jin Jeon
- Department of Marine Life Sciences, Jeju National University, Jeju Special Self-Governing Province, 63243, Republic of Korea.
| | - Hyun Joo An
- Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon, 34134, Republic of Korea; Asia Glycomics Reference Site, Daejeon, 34134, Republic of Korea.
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8
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Hua X, Feng X, Liang G, Chao J, Wang D. Exposure to 6-PPD Quinone at Environmentally Relevant Concentrations Causes Abnormal Locomotion Behaviors and Neurodegeneration in Caenorhabditis elegans. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:4940-4950. [PMID: 36913653 DOI: 10.1021/acs.est.2c08644] [Citation(s) in RCA: 64] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
6-PPD quinone (6-PPDQ) can be transformed from 6-PPD through ozonation. Nevertheless, the potential neurotoxicity of 6-PPDQ after long-term exposure and the underlying mechanism are largely unclear. In Caenorhabditis elegans, we here observed that 0.1-10 μg/L of 6-PPDQ caused several forms of abnormal locomotion behaviors. Meanwhile, the neurodegeneration of D-type motor neurons was observed in 10 μg/L of 6-PPDQ-exposed nematodes. The observed neurodegeneration was associated with the activation of the Ca2+ channel DEG-3-mediated signaling cascade. In this signaling cascade, expressions of deg-3, unc-68, itr-1, crt-1, clp-1, and tra-3 were increased by 10 μg/L of 6-PPDQ. Moreover, among genes encoding neuronal signals required for the control of stress response, expressions of jnk-1 and dbl-1 were decreased by 0.1-10 μg/L of 6-PPDQ, and expressions of daf-7 and glb-10 were decreased by 10 μg/L of 6-PPDQ. RNAi of jnk-1, dbl-1, daf-7, and glb-10 resulted in the susceptibility to 6-PPDQ toxicity in decreasing locomotory ability and in inducing neurodegeneration, suggesting that JNK-1, DBL-1, DAF-7, and GLB-10 were also required for the induction of 6-PPDQ neurotoxicity. Molecular docking analysis further demonstrated the binding potential of 6-PPDQ to DEG-3, JNK-1, DBL-1, DAF-7, and GLB-10. Together, our data suggested the exposure risk of 6-PPDQ at environmentally relevant concentrations in causing neurotoxicity in organisms.
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Affiliation(s)
- Xin Hua
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Xiao Feng
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Geyu Liang
- School of Public Health, Southeast University, Nanjing 210009, China
| | - Jie Chao
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Dayong Wang
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
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9
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Akinola LS, Bagdas D, Alkhlaif Y, Jackson A, Gurdap CO, Rahimpour E, Carroll FI, Papke RL, Damaj MI. Pharmacological characterization of 5-iodo-A-85380, a β2-selective nicotinic receptor agonist, in mice. J Psychopharmacol 2022; 36:1280-1293. [PMID: 36321267 PMCID: PMC9817006 DOI: 10.1177/02698811221132214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
BACKGROUND Because of their implications in several pathological conditions, α4β2* nicotinic acetylcholine receptors (nAChRs) are potential targets for the treatment of nicotine dependence, pain, and many psychiatric and neurodegenerative diseases. However, they exist in various subtypes, and finding selective tools to investigate them has proved challenging. The nicotinic receptor agonist, 5-iodo-A-85380 (5IA), has helped in delineating the function of β2-containing subtypes in vitro; however, much is still unknown about its behavioral effects. Furthermore, its effectiveness on α6-containing subtypes is limited. AIMS To investigate the effects of 5IA on nociception (formalin, hot-plate, and tail-flick tests), locomotion, hypothermia, and conditioned reward after acute and repeated administration, and to examine the potential role of β2 and α6 nAChR subunits in these effects. Lastly, its selectivity for expressed low sensitivity (LS) and high sensitivity (HS) α4β2 receptors is investigated. RESULTS 5IA dose-dependently induced hypothermia, locomotion suppression, conditioned place preference, and antinociception (only in the formalin test but not in the hot-plate or tail-flick tests). Furthermore, these effects were mediated by β2 but not α6 nicotinic subunits. Finally, we show that 5-iodo-A-85380 potently activates both stoichiometries of α4β2 nAChRs with differential efficacies, being a full agonist on HS α4(2)β2(3) nAChRs, and a partial agonist on LS α4(3)β2(2) nAChRs and α6-containing subtypes as well.
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Affiliation(s)
- Lois S Akinola
- Department of Pharmacology and Toxicology, Medical College of Virginia, Virginia Commonwealth University, USA
| | - Deniz Bagdas
- Department of Psychiatry, School of Medicine, Yale University, USA
- Yale Tobacco Center of Regulatory Science, Yale University, USA
| | - Yasmin Alkhlaif
- Department of Pharmacology and Toxicology, Medical College of Virginia, Virginia Commonwealth University, USA
| | - Asti Jackson
- Department of Psychiatry, School of Medicine, Yale University, USA
- Yale Tobacco Center of Regulatory Science, Yale University, USA
| | - Cenk O Gurdap
- Science for Life Laboratory, Department of Women’s and Children’s Health, Karolinska Institutet, Sweden
| | - Elnaz Rahimpour
- Yale Tobacco Center of Regulatory Science, Yale University, USA
| | - F Ivy Carroll
- Center for Organic and Medicinal Chemistry, Research Triangle Institute, Research Triangle Park, USA
| | - Roger L Papke
- Department of Pharmacology and Therapeutics, University of Florida, USA
| | - M Imad Damaj
- Department of Pharmacology and Toxicology, Medical College of Virginia, Virginia Commonwealth University, USA
- Translational Research Initiative for Pain and Neuropathy, Medical College of Virginia Campus, Virginia Commonwealth University, USA
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10
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Tangmanussukum P, Kawichai T, Suratanee A, Plaimas K. Heterogeneous network propagation with forward similarity integration to enhance drug-target association prediction. PeerJ Comput Sci 2022; 8:e1124. [PMID: 36262151 PMCID: PMC9575853 DOI: 10.7717/peerj-cs.1124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 09/14/2022] [Indexed: 06/16/2023]
Abstract
Identification of drug-target interaction (DTI) is a crucial step to reduce time and cost in the drug discovery and development process. Since various biological data are publicly available, DTIs have been identified computationally. To predict DTIs, most existing methods focus on a single similarity measure of drugs and target proteins, whereas some recent methods integrate a particular set of drug and target similarity measures by a single integration function. Therefore, many DTIs are still missing. In this study, we propose heterogeneous network propagation with the forward similarity integration (FSI) algorithm, which systematically selects the optimal integration of multiple similarity measures of drugs and target proteins. Seven drug-drug and nine target-target similarity measures are applied with four distinct integration methods to finally create an optimal heterogeneous network model. Consequently, the optimal model uses the target similarity based on protein sequences and the fused drug similarity, which combines the similarity measures based on chemical structures, the Jaccard scores of drug-disease associations, and the cosine scores of drug-drug interactions. With an accuracy of 99.8%, this model significantly outperforms others that utilize different similarity measures of drugs and target proteins. In addition, the validation of the DTI predictions of this model demonstrates the ability of our method to discover missing potential DTIs.
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Affiliation(s)
- Piyanut Tangmanussukum
- Advanced Virtual and Intelligent Computing (AVIC) Center, Department of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
| | - Thitipong Kawichai
- Department of Mathematics and Computer Science, Academic Division, Chulachomklao Royal Military Academy, Nakhon Nayok, Thailand
| | - Apichat Suratanee
- Department of Mathematics, Faculty of Applied Science, King Mongkut’s University of Technology North Bangkok, Bangkok, Thailand
- Intelligent and Nonlinear Dynamics Innovations Research Center, Science and Technology Research Institute, King Mongkut’s University of Technology North Bangkok, Bangkok, Thailand
| | - Kitiporn Plaimas
- Advanced Virtual and Intelligent Computing (AVIC) Center, Department of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
- Omics Science and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand
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11
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Li B, Luo B, Yang H, Tang W. Heck Reaction of
N
‐Heteroaryl Halides for the Concise Synthesis of Chiral α‐Heteroaryl‐substituted Heterocycles. Angew Chem Int Ed Engl 2022; 61:e202209087. [DOI: 10.1002/anie.202209087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Indexed: 11/08/2022]
Affiliation(s)
- Bowen Li
- School of Chemistry and Materials Science Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences 1 Sub-lane Xiangshan Hangzhou 310024 China
| | - Bangke Luo
- State Key Laboratory of Bio-Organic and Natural Products Chemistry Center for Excellence in Molecular Synthesis Shanghai Institute of Organic Chemistry University of Chinese Academy of Sciences 345 Lingling Road Shanghai 200032 China
| | - He Yang
- State Key Laboratory of Bio-Organic and Natural Products Chemistry Center for Excellence in Molecular Synthesis Shanghai Institute of Organic Chemistry University of Chinese Academy of Sciences 345 Lingling Road Shanghai 200032 China
| | - Wenjun Tang
- School of Chemistry and Materials Science Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences 1 Sub-lane Xiangshan Hangzhou 310024 China
- State Key Laboratory of Bio-Organic and Natural Products Chemistry Center for Excellence in Molecular Synthesis Shanghai Institute of Organic Chemistry University of Chinese Academy of Sciences 345 Lingling Road Shanghai 200032 China
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12
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Mhaldar SN, Kotkar GD, Tilve SG. Synthetic access to Syn-functionalised chiral hydroxy pyrrolidines and pyrrolidones: Evaluation of α-glucosidase inhibition activity, docking studies and pharmacokinetics prediction. Bioorg Chem 2022; 129:106115. [DOI: 10.1016/j.bioorg.2022.106115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 08/17/2022] [Accepted: 08/24/2022] [Indexed: 11/02/2022]
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13
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Li B, Luo B, Yang H, Tang W. Heck Reaction of N‐Heteroaryl Halides for the Concise Synthesis of Chiral α‐Heteroaryl‐substituted Heterocycles. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202209087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Bowen Li
- Shanghai Institute Of Organic Chemistry State Key Laboratory of Bioorganic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Bangke Luo
- Shanghai Institute Of Organic Chemistry State Key Laboratory of Bioorganic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - He Yang
- Shanghai Institute Of Organic Chemistry State Key Laboratory of Bioorganic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Wenjun Tang
- Shanghai Institute of Organic Chemistry State Key Laboratory of Bio-Organic and Natural Products Chemistry 345 Ling Ling Road 200032 Shanghai CHINA
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14
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Ye X, Zhang Y, Song X, Liu Q. Research Progress in the Pharmacological Effects and Synthesis of Nicotine. ChemistrySelect 2022. [DOI: 10.1002/slct.202104425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Xiaoping Ye
- Department of Pharmaceutical Engineering College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
| | - Yanxin Zhang
- Department of Pharmaceutical Engineering College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
- Glycobiology and Glycotechnology Research center College of Food Science and Technology Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
- College of Life Sciences Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
| | - Xiaoping Song
- Department of Pharmaceutical Engineering College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
- Shaanxi Key Laboratory of Degradable Biomedical Materials College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
- Shaanxi R&D Center of Biomaterials and Fermentation Engineering College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
| | - Qingchao Liu
- Department of Pharmaceutical Engineering College of Chemical Engineering Northwest University Taibai North Road 229 Xi'an 710069 Shaanxi P.R. China
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15
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Takeda N, Hirata K, Tsuruta K, Santis GD, Xantheas SS, Ishiuchi SI, Fujii M. Gas phase protonated nicotine is a mixture of pyridine- and pyrrolidine-protonated conformers: implications for its native structure in the nicotinic acetylcholine receptor. Phys Chem Chem Phys 2021; 24:5786-5793. [PMID: 34939632 DOI: 10.1039/d1cp05175j] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The infrared (IR) spectra of gas phase protonated nicotine has been measured in the never-before probed N-H "fingerprint region" (3200-3500 cm-1). The protonated molecules generated by an electrospray source are thermalized in the first ion trap with water vapor and He gas at a pre-determined temperature prior to being probed by IR spectroscopy in the second ion trap at 4 K. The IR spectra exhibit two N-H stretching bands which are assigned to the pyridine and pyrrolidine protomers with the aid of high-level electronic structure calculations. This finding is in sharp contrast to previous spectroscopic studies that suggested a single population of the pyridine protomer. The relative populations of the two protomers vary by changing the temperature of the thermalizing trap from 180-300 K. The relative conformer populations at 240 K and 300 K are well reproduced by the theoretical calculations, unequivocally determining that gas phase nicotine is a 3 : 2 mixture of both pyridine and pyrrolidine protomers at room temperature. The thermalizing anhydrous vapor does not result in any population change. It rather demonstrates the catalytic role of water in achieving equilibrium between the two protomers. The combination of IR spectroscopy and electronic structure calculations establish the small energy difference between the pyridine and pyrrolidine protomers in nicotine. One of the gas phase nicotine pyrrolidine protomers has the closest conformational resemblance among all low-lying energy isomers with the X-ray structure of nicotine in the nicotinic acetylcholine receptor (nAChR).
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Affiliation(s)
- Naoya Takeda
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa, 226-8503, Japan
| | - Keisuke Hirata
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Department of Chemistry, School of Science, Tokyo Institute of Technology, 2-12-1 4259 Ookayama, Meguro-ku, Tokyo, 152-8550, Japan. .,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan.
| | - Kazuya Tsuruta
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa, 226-8503, Japan
| | - Garrett D Santis
- Department of Chemistry, University of Washington, Seattle, WA 98195, USA
| | - Sotiris S Xantheas
- Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Department of Chemistry, University of Washington, Seattle, WA 98195, USA.,Advanced Computing, Mathematics and Data Division, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, MS K1-83, Richland, WA 99352, USA
| | - Shun-Ichi Ishiuchi
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,Department of Chemistry, School of Science, Tokyo Institute of Technology, 2-12-1 4259 Ookayama, Meguro-ku, Tokyo, 152-8550, Japan. .,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan.
| | - Masaaki Fujii
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan. .,School of Life Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama, Kanagawa, 226-8503, Japan.,Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovation Research, Tokyo Institute of Technology, 4259, Nagatsuta-cho, Midori-ku, Yokohama, 226-8503, Japan.
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16
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Panda B, Albano G. Synthetic Methods for the Preparation of Conformationally Restricted Analogues of Nicotine. Molecules 2021; 26:7544. [PMID: 34946630 PMCID: PMC8706964 DOI: 10.3390/molecules26247544] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 12/09/2021] [Accepted: 12/10/2021] [Indexed: 11/22/2022] Open
Abstract
In the context of naturally occurring nitrogen heterocycles, nicotine is a chiral alkaloid present in tobacco plants, which can target and stimulate nicotinic acetylcholine receptors (nAChRs), a class of ligand-gated ion channels commonly located throughout the human brain. Due to its well-known toxicity for humans, there is considerable interest in the development of synthetic analogues; in particular, conformationally restricted analogues of nicotine have emerged as promising drug molecules for selective nAChR-targeting ligands. In the present mini-review, we will describe the synthesis of the conformationally restricted analogues of nicotine involving one or more catalytic processes. In particular, we will follow a systematic approach as a function of the heteroarene structure, considering: (a) 2,3-annulated tricyclic derivatives; (b) 3,4-annulated tricyclic derivatives; (c) tetracyclic derivatives; and (d) other polycyclic derivatives. For each of them we will also consider, when carried out, biological studies on their activity for specific nAChR subunits.
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Affiliation(s)
- Biswajit Panda
- Department of Chemistry, City College, 102/1 Raja Rammohan Sarani, Kolkata 700009, India
| | - Gianluigi Albano
- Dipartimento di Chimica, Università degli Studi di Bari "Aldo Moro", Via Edoardo Orabona 4, 70126 Bari, Italy
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17
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Bilonda MK, Mammino L. Computational studies of biologically active alkaloids of plant origin: an overview. PHYSICAL SCIENCES REVIEWS 2020. [DOI: 10.1515/psr-2019-0132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Computational studies nowadays constitute a crucial source of information for drug development, because they provide information on many molecular properties and also enable predictions of the properties of not-yet-synthesized compounds. Alkaloids are a vast group of natural products exhibiting a variety of biological activities, many of which are interesting for drug development. On the other hand, computational studies of biologically active alkaloids have so far mostly focused on few particularly relevant or “popular” molecules, such as quinine, caffeine, or cocaine, with only few works on the other molecules. The present work offers an overview of existing computational studies on alkaloid molecules, from the earliest ones to the most recent, and considering all the theoretical approaches with which studies have been performed (both quantum mechanics and molecular dynamics). The considered studies are grouped according to their objectives and outcomes, such as conformational analysis of alkaloid molecules, effects of selected solvents on their properties, docking studies aimed at better understanding of the interactions between alkaloid molecules and biological targets, studies focusing on structure activity relationships, and computational studies performed to confirm experimental results. It is concluded that it would be important that computational studies on many other alkaloid molecules are performed and their results made available, covering their different classes as well as the variety of their biological activities, to attain better understanding of the properties not only of individual molecules, but also of groups of related molecules and of the overall alkaloids family.
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Affiliation(s)
- Mireille K. Bilonda
- School of Mathematical and Natural Sciences, University of Venda , Thohoyandou , South Africa
- Faculty of Science, University of Kinshasa , Kinshasa , Democratic Republic of Congo
| | - Liliana Mammino
- School of Mathematical and Natural Sciences, University of Venda , Thohoyandou , South Africa
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18
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Mohammadkhani L, Heravi MM. Applications of Transition-Metal-Catalyzed Asymmetric Allylic Substitution in Total Synthesis of Natural Products: An Update. CHEM REC 2020; 21:29-68. [PMID: 33206466 DOI: 10.1002/tcr.202000086] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 10/21/2020] [Accepted: 10/22/2020] [Indexed: 01/14/2023]
Abstract
Metal-catalyzed asymmetric allylic substitution (AAS) reaction is one of the most synthetically useful reactions catalyzed by metal complexes for the formation of carbon-carbon and carbon-heteroatom bonds. It comprises the substitution of allylic substrates with a wide range of nucleophiles or SN 2'-type allylic substitution, which results in the formation of the above-mentioned bonds with high levels of enantioselective induction. AAS reaction tolerates a broad range of functional groups, thus has been successfully applied in the asymmetric synthesis of a wide range of optically pure compounds. This reaction has been extensively used in the total synthesis of several complex molecules, especially natural products. In this review, we try to highlight the applications of metal (Pd, Ir, Mo, or Cu)-catalyzed AAS reaction in the total synthesis of the biologically active natural products, as a key step, updating the subject from 2003 till date.
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Affiliation(s)
- Leyla Mohammadkhani
- Department of Chemistry, School of Sciences, Alzahra University Vanak, Tehran, Iran
| | - Majid M Heravi
- Department of Chemistry, School of Sciences, Alzahra University Vanak, Tehran, Iran
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19
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Heinrich CF, Durand D, Starck J, Michelet V. Ruthenium Metathesis: A Key Step To Access a New Cyclic Tetrasubstituted Olefin Platform. Org Lett 2020; 22:7064-7067. [PMID: 32806204 DOI: 10.1021/acs.orglett.0c01344] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
An rapid and mild synthetic route for the preparation of cyclic tetrasubstituted platforms via ruthenium-catalyzed ring-closing metathesis (RCM) has been developed. This process tolerates a wide range of functionalities such as nitrogen, oxygen, sulfur, silicon, and carbon tethered groups, as well as very challenging fluorine and boron atoms (36 derivatives, up to 96%). This diversity-oriented method was further demonstrated by the postfunctionalization reactions, such as Pd-couplings, N-substitution, and reductive amination introducing a morpholine moiety.
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Affiliation(s)
- Clément F Heinrich
- PSL Research University, Chimie ParisTech-CNRS, Institut de Recherche de Chimie Paris, 11 rue P. et M. Curie, 75005 Paris, France
| | - Didier Durand
- Institut de Recherches Servier, 125 Chemin de Ronde, 78290 Croissy-Seine, France
| | - Jérôme Starck
- Institut de Recherches Servier, 125 Chemin de Ronde, 78290 Croissy-Seine, France
| | - Véronique Michelet
- PSL Research University, Chimie ParisTech-CNRS, Institut de Recherche de Chimie Paris, 11 rue P. et M. Curie, 75005 Paris, France.,University Côte d'Azur, Institut de Chimie de Nice, Parc Valrose, Faculté des Sciences, 06100 Nice, France
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20
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Cho Y, Pham Ba VA, Jeong JY, Choi Y, Hong S. Ion-Selective Carbon Nanotube Field-Effect Transistors for Monitoring Drug Effects on Nicotinic Acetylcholine Receptor Activation in Live Cells. SENSORS 2020; 20:s20133680. [PMID: 32630098 PMCID: PMC7374424 DOI: 10.3390/s20133680] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 06/27/2020] [Accepted: 06/29/2020] [Indexed: 12/23/2022]
Abstract
We developed ion-selective field-effect transistor (FET) sensors with floating electrodes for the monitoring of the potassium ion release by the stimulation of nicotinic acetylcholine receptors (nAChRs) on PC12 cells. Here, ion-selective valinomycin-polyvinyl chloride (PVC) membranes were coated on the floating electrode-based carbon nanotube (CNT) FETs to build the sensors. The sensors could selectively measure potassium ions with a minimum detection limit of 1 nM. We utilized the sensor for the real-time monitoring of the potassium ion released from a live cell stimulated by nicotine. Notably, this method also allowed us to quantitatively monitor the cell responses by agonists and antagonists of nAChRs. These results suggest that our ion-selective CNT-FET sensor has potential uses in biological and medical researches such as the monitoring of ion-channel activity and the screening of drugs.
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Affiliation(s)
- Youngtak Cho
- Department of Physics and Astronomy and Institute of Applied Physics, Seoul National University, Seoul 08826, Korea; (Y.C.); (V.A.P.B.); (J.-Y.J.); (Y.C.)
| | - Viet Anh Pham Ba
- Department of Physics and Astronomy and Institute of Applied Physics, Seoul National University, Seoul 08826, Korea; (Y.C.); (V.A.P.B.); (J.-Y.J.); (Y.C.)
- Department of Environmental Toxicology and Monitoring, Hanoi University of Natural Resources and Environment, Hanoi 11916, Vietnam
| | - Jin-Young Jeong
- Department of Physics and Astronomy and Institute of Applied Physics, Seoul National University, Seoul 08826, Korea; (Y.C.); (V.A.P.B.); (J.-Y.J.); (Y.C.)
| | - Yoonji Choi
- Department of Physics and Astronomy and Institute of Applied Physics, Seoul National University, Seoul 08826, Korea; (Y.C.); (V.A.P.B.); (J.-Y.J.); (Y.C.)
| | - Seunghun Hong
- Department of Physics and Astronomy and Institute of Applied Physics, Seoul National University, Seoul 08826, Korea; (Y.C.); (V.A.P.B.); (J.-Y.J.); (Y.C.)
- Correspondence: ; Tel.: +82-2-880-1343
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21
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Synthesis of new alkynyl containing 9-azabicyclo[4.2.1]nonatrienes from diynes and azepines. MENDELEEV COMMUNICATIONS 2020. [DOI: 10.1016/j.mencom.2020.05.019] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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22
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Gouthami P, Karteek Goud G, Mainkar PS, Chandrasekhar S. Rapid and one-pot synthesis of tri- to tetradeca-deutero nicotines. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.151680] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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23
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Rao WH, Jiang LL, Chen FY, Zhang M, Guo YY, Chen JJ, Cui Y, Zou GD, Tang L. Access to functionalized pyrrolidones via copper-catalyzed aminooxygenation of unactivated alkenes. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2019.151540] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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24
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Sun B, Wang Z. Syntheses and Biological Properties of Pyrido[3,4‐
b
]homotropane (PHT) and its Analogues with Bridged Aza‐[
n
.2.1] Skeletons. ASIAN J ORG CHEM 2019. [DOI: 10.1002/ajoc.201900348] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Bingxia Sun
- School of Life SciencesShandong University of Technology 266# West Xincun Road Zibo, Shandong China
| | - Zhongwen Wang
- State Key Laboratory and Institute of Elemento-Organic ChemistryCollege of ChemistryNankai University Weijin Road 94# Tianjin 300071 China
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25
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Minimal Structural Changes Determine Full and Partial Nicotinic Receptor Agonist Activity for Nicotine Analogues. Molecules 2019; 24:molecules24152684. [PMID: 31344816 PMCID: PMC6695845 DOI: 10.3390/molecules24152684] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2019] [Revised: 07/16/2019] [Accepted: 07/22/2019] [Indexed: 11/17/2022] Open
Abstract
Neuronal α4β2 nicotinic acetylcholine receptors (nAChRs) are ligand-gated ion channels (LGIC) that have been implicated in nicotine addiction, reward, cognition, pain disorders, anxiety, and depression. Nicotine has been widely used as a template for the synthesis of ligands that prefer α4β2 nAChRs subtypes. The most important therapeutic use for α4β2 nAChRs is as replacement therapy for smoking cessation and withdrawal and the most successful therapeutic ligands are partial agonists. In this case, we use the N-methylpyrrolidine moiety of nicotine to design and synthesize new α4β2 nicotinic derivatives, coupling the pyrrolidine moiety to an aromatic group by introducing an ether-bonded functionality. Meta-substituted phenolic derivatives were used for these goals. Radioligand binding assays were performed on clonal cell lines of hα4β2 nAChR and two electrode voltage-clamp experiments were used for functional assays. Molecular docking was performed in the open state of the nAChR in order to rationalize the agonist activity shown by our compounds.
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26
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Hardouin C, Poixblanc A, Barière F, Tamion R, Dubuffet T, Hervouet Y, Mouchet P. Development of an Efficient Synthesis of an Agonist of Acetylcholine Nicotinic Receptor. Org Process Res Dev 2018. [DOI: 10.1021/acs.oprd.8b00220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Christophe Hardouin
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - Aurélie Poixblanc
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - François Barière
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - Rodolphe Tamion
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - Thierry Dubuffet
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - Yvon Hervouet
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
| | - Patrick Mouchet
- Industrial Research Centre, Oril Industrie, 13 rue Desgenétais, 76210 Bolbec, France
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27
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Liu W, Li MD. Insights Into Nicotinic Receptor Signaling in Nicotine Addiction: Implications for Prevention and Treatment. Curr Neuropharmacol 2018; 16:350-370. [PMID: 28762314 PMCID: PMC6018190 DOI: 10.2174/1570159x15666170801103009] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Revised: 06/18/2017] [Accepted: 07/28/2017] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND Nicotinic acetylcholine receptors (nAChRs) belong to the Cys-loop ligandgated ion-channel (LGIC) superfamily, which also includes the GABA, glycine, and serotonin receptors. Many nAChR subunits have been identified and shown to be involved in signal transduction on binding to them of either the neurotransmitter acetylcholine or exogenous ligands such as nicotine. The nAChRs are pentameric assemblies of homologous subunits surrounding a central pore that gates cation flux, and they are expressed at neuromuscular junctions throughout the nervous system. METHODS AND RESULTS Because different nAChR subunits assemble into a variety of pharmacologically distinct receptor subtypes, and different nAChRs are implicated in various physiological functions and pathophysiological conditions, nAChRs represent potential molecular targets for drug addiction and medical therapeutic research. This review intends to provide insights into recent advances in nAChR signaling, considering the subtypes and subunits of nAChRs and their roles in nicotinic cholinergic systems, including structure, diversity, functional allosteric modulation, targeted knockout mutations, and rare variations of specific subunits, and the potency and functional effects of mutations by focusing on their effects on nicotine addiction (NA) and smoking cessation (SC). Furthermore, we review the possible mechanisms of action of nAChRs in NA and SC based on our current knowledge. CONCLUSION Understanding these cellular and molecular mechanisms will lead to better translational and therapeutic operations and outcomes for the prevention and treatment of NA and other drug addictions, as well as chronic diseases, such as Alzheimer's and Parkinson's. Finally, we put forward some suggestions and recommendations for therapy and treatment of NA and other chronic diseases.
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Affiliation(s)
- Wuyi Liu
- State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Zhejiang University School of Medicine, Hangzhou, China.,School of Biological Sciences and Food Engineering, Fuyang Normal University, Fuyang, Anuhi 236041, China
| | - Ming D Li
- State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Zhejiang University School of Medicine, Hangzhou, China.,Research Center for Air Pollution and Health, Zhejiang University, Hangzhou, China.,Institute of NeuroImmune Pharmacology, Seton Hall University, South Orange, NJ, United States
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28
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Kumar RS, Almansour AI, Arumugam N, Periyasami G, Athimoolam S, Kumar RR, Asad M, Asiri AM. Dipolar cycloaddition based multi-component reaction: Synthesis of spiro tethered acenaphthylene–indolizine–pyridinone hybrids. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.07.051] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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29
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Zarezin DP, Kabylda AM, Vinogradova VI, Dorovatovskii PV, Khrustalev VN, Nenajdenko VG. Efficient synthesis of tetrazole derivatives of cytisine using the azido-Ugi reaction. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.06.045] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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30
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Roy TK, Parhi B, Ghorai P. Cinchonamine Squaramide Catalyzed Asymmetric aza-Michael Reaction: Dihydroisoquinolines and Tetrahydropyridines. Angew Chem Int Ed Engl 2018; 57:9397-9401. [DOI: 10.1002/anie.201805020] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Indexed: 12/26/2022]
Affiliation(s)
- Tarun Kumar Roy
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
| | - Biswajit Parhi
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
| | - Prasanta Ghorai
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
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31
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Roy TK, Parhi B, Ghorai P. Cinchonamine Squaramide Catalyzed Asymmetric aza-Michael Reaction: Dihydroisoquinolines and Tetrahydropyridines. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201805020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Tarun Kumar Roy
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
| | - Biswajit Parhi
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
| | - Prasanta Ghorai
- Department of Chemistry; Indian Institute of Science Education and Research (IISER) Bhopal; Bhopal By-pass Road Bhauri Bhopal- 462066 India
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32
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Smolobochkin AV, Rizbaeva TS, Gazizov AS, Burilov AR, Pudovik MA. Acid-Catalyzed Reaction of N-(4,4-Diethoxybutyl)ureas with Pyrazol-5-ones. Synthesis of 2-Pyrazolylpyrrolidines. RUSSIAN JOURNAL OF ORGANIC CHEMISTRY 2018. [DOI: 10.1134/s1070428018030211] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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33
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Cabrera PJ, Lee M, Sanford MS. Second-Generation Palladium Catalyst System for Transannular C-H Functionalization of Azabicycloalkanes. J Am Chem Soc 2018; 140:5599-5606. [PMID: 29652497 PMCID: PMC5956530 DOI: 10.1021/jacs.8b02142] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
This article describes the development of a second-generation catalyst system for the transannular C-H functionalization of alicyclic amines. Pyridine- and quinoline-carboxylate ligands are shown to be highly effective for increasing the reaction rate, yield, and scope of Pd-catalyzed transannular C-H arylation reactions of azabicyclo[3.1.0]hexane, azabicyclo[3.1.1]heptane, azabicyclo[3.2.1]octane, and piperidine derivatives. Mechanistic studies reveal that the pyridine/quinoline-carboxylates play a role in impeding both reversible and irreversible catalyst decomposition pathways. These ligands enable the first reported examples of the transannular C-H arylation of the ubiquitous tropane, 7-azanorbornane, and homotropane cores. Finally, the pyridine/quinoline-carboxylates are shown to promote both transannular C-H arylation and transannular C-H dehydrogenation on a homotropane substrate.
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Deligia F, Murineddu G, Gotti C, Ragusa G, Fasoli F, Sciaccaluga M, Plutino S, Fucile S, Loriga G, Asproni B, Pinna GA. Pyridinyl- and pyridazinyl-3,6-diazabicyclo[3.1.1]heptane-anilines: Novel selective ligands with subnanomolar affinity for α 4β 2 nACh receptors. Eur J Med Chem 2018; 152:401-416. [PMID: 29751234 DOI: 10.1016/j.ejmech.2018.04.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Revised: 03/27/2018] [Accepted: 04/11/2018] [Indexed: 11/29/2022]
Abstract
The cholinergic pathways in the central nervous system (CNS) of animals and humans are important for cognitive and behavioural functions. Until a few years ago, it was thought that the key molecules transducing the cholinergic message were the metabotropic muscarinic receptors, but it is now known that ionotropic neuronal nicotinic receptors (nAChRs) are also involved. Based on recent studies, we prepared a small library of novel 3-substituted-3,6-diazabicyclo [3.1.1]heptanes, whose binding activity and functionality have been assayed. Among the synthesized compounds, the 3-(anilino)pyridine series resulted in the most interesting compounds with α4β2Ki values ranging from 0.0225 nM (12g) to 2.06 nM (12o).
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Affiliation(s)
- Francesco Deligia
- Istituto di Chimica Biomolecolare, Consiglio Nazionale delle Ricerche, Trav. La Crucca 3, 07100, Sassari, Italy
| | - Gabriele Murineddu
- Department of Chemistry and Pharmacy, University of Sassari, Via F. Muroni 23/A, 07100, Sassari, Italy.
| | - Cecilia Gotti
- CNR, Institute of Neuroscience, Via Vanvitelli 32, 20129, Milano, Italy
| | - Giulio Ragusa
- Department of Chemistry and Pharmacy, University of Sassari, Via F. Muroni 23/A, 07100, Sassari, Italy
| | - Francesca Fasoli
- CNR, Institute of Neuroscience, Via Vanvitelli 32, 20129, Milano, Italy
| | | | - Simona Plutino
- Dipartimento di Fisiologia e Farmacologia "V. Erspamer, Sapienza Università di Roma, P.le Aldo Moro 5, 00185, Roma, Italy
| | - Sergio Fucile
- IRCCS Neuromed, Via Atinese 18, 86077, Pozzilli, IS, Italy; Dipartimento di Fisiologia e Farmacologia "V. Erspamer, Sapienza Università di Roma, P.le Aldo Moro 5, 00185, Roma, Italy
| | - Giovanni Loriga
- Institute of Translational Pharmacology, National Research Council, 09010, Pula, Cagliari, Italy
| | - Battistina Asproni
- Department of Chemistry and Pharmacy, University of Sassari, Via F. Muroni 23/A, 07100, Sassari, Italy
| | - Gerard A Pinna
- Department of Chemistry and Pharmacy, University of Sassari, Via F. Muroni 23/A, 07100, Sassari, Italy
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Sun B, Ren J, Xing S, Wang Z. Synthesis of (−)-Pyrido[3,4-b]homotropane (PHT) and (±)-PHT via an Intramolecular Cross [3+2] Cycloaddition Strategy. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201701438] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Bingxia Sun
- State Key Laboratory and Institute of Elemento-Organic Chemistry, College of Chemistry; Nankai University; Tianjin 300071 People's Republic of China
| | - Jun Ren
- State Key Laboratory and Institute of Elemento-Organic Chemistry, College of Chemistry; Nankai University; Tianjin 300071 People's Republic of China
| | - Siyang Xing
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules, Key Laboratory of Inorganic-Organic Hybrid Functional Material Chemistry, Ministry of Education (Tianjin Normal University), College of Chemistry; Tianjin Normal University; Tianjin 300387 People's Republic of China
| | - Zhongwen Wang
- State Key Laboratory and Institute of Elemento-Organic Chemistry, College of Chemistry; Nankai University; Tianjin 300071 People's Republic of China
- Collaborative Innovation Center of Chemical Science and Engineering(Tianjin); Nankai University; Tianjin 300071 People's Republic of China
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Huang LC, Lin CL, Qiu JZ, Lin CY, Hsu KW, Tam KW, Lee JY, Yang JM, Lee CH. Nicotinic Acetylcholine Receptor Subtype Alpha-9 Mediates Triple-Negative Breast Cancers Based on a Spontaneous Pulmonary Metastasis Mouse Model. Front Cell Neurosci 2017; 11:336. [PMID: 29163048 PMCID: PMC5675882 DOI: 10.3389/fncel.2017.00336] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 10/12/2017] [Indexed: 01/03/2023] Open
Abstract
Triple-negative breast cancer (TNBC) subtype is associated with poor prognosis and a high risk of recurrence-related death in women. Despite the aggressiveness of TNBCs, targeted TNBC therapy is not yet available in the clinic. To overcome this challenge, we generated highly metastatic TNBC cells (LM) derived from metastasized lung cells via a serial spontaneous pulmonary metastasis animal model to identify targetable molecules for attenuating the progression of TNBC metastasis. Gene analysis of primary tumor (P), first-round (1LM) and second-round (2LM) metastasized lung cells revealed that mesenchymal-related genes were significantly expressed in LM cells, especially in 2LM cells. Interestingly, α9-nAChR gene expression was also dramatically induced in LM cells, confirming our previous finding that α9-nAChR plays important roles in receptor-mediated carcinogenic signals in human breast cancer development. Using α9-nAChR as a biomarker, we transfected 2LM cells with CRISPR/Cas9 lentivirus targeting the α9-nAChR genomic region (2LM-α9-nAChR-null), showing that mesenchymal markers and the migration and invasion abilities of 2LM cells were significantly attenuated in 2LM-α9-nAChR-null cells both in vitro and in vivo. In addition, the high efficiency of editing the α9-nAChR gene using a CRISPR/Cas9 lentivirus was demonstrated by gene sequencing, genomic indel frequency and protein expression analyses. Collectively, these results confirmed those of our previous study that advanced-stage breast tumors are associated with substantially higher levels of α9-nAChR gene expression, indicating that α9-nAChR expression is essential for mediating TNBC metastasis during cancer development and may potentially act as a biomarker for targeted therapy in clinical investigations.
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Affiliation(s)
- Li-Chi Huang
- Department of Endocrinology, Cathay General Hospital, Taipei, Taiwan
| | - Ching-Ling Lin
- Department of Endocrinology, Cathay General Hospital, Taipei, Taiwan
| | - Jia-Zheng Qiu
- School of Medical Laboratory Science and Biotechnology, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan
| | - Chun-Yu Lin
- Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu, Taiwan
| | - Kai-Wen Hsu
- Research Center for Tumor Medical Science, China Medical University, Taichung, Taiwan
| | - Ka-Wai Tam
- Graduate Institute of Clinical Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.,Division of General Surgery, Department of Surgery, Shuang Ho Hospital, Taipei Medical University, Taipei, Taiwan.,Department of Surgery, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
| | - Jung-Yu Lee
- Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu, Taiwan
| | - Jinn-Moon Yang
- Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu, Taiwan.,Department of Biological Science and Technology, National Chiao Tung University, Hsinchu, Taiwan
| | - Chia-Hwa Lee
- School of Medical Laboratory Science and Biotechnology, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan.,Department of Laboratory Medicine, Shuang Ho Hospital, Taipei Medical University, Taipei, Taiwan.,Comprehensive Cancer Center of Taipei Medical University, Taipei, Taiwan
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Chemical Composition and Hypotensive Effect of Campomanesia xanthocarpa. EVIDENCE-BASED COMPLEMENTARY AND ALTERNATIVE MEDICINE 2017; 2017:1591762. [PMID: 28584558 PMCID: PMC5443999 DOI: 10.1155/2017/1591762] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2017] [Revised: 04/12/2017] [Accepted: 04/26/2017] [Indexed: 11/18/2022]
Abstract
Campomanesia xanthocarpa is known in Brazil as Guabiroba and is popularly used for various diseases, such as inflammatory, renal, and digestive diseases and dyslipidemia. The aim of the study was to analyze the chemical composition and investigate the effects of aqueous extract of C. xanthocarpa on the blood pressure of normotensive rats, analyzing the possible action mechanism using experimental and in silico procedures. The extract was evaluated for total phenolic compounds and total flavonoid content. The chemical components were determined by HPLC analyses. Systolic and diastolic blood pressure and heart rate were measured with extract and drugs administration. The leaves of C. xanthocarpa presented the relevant content of phenolics and flavonoids, and we suggested the presence of chlorogenic acid, gallic acid, quercetin, and theobromine. The acute administration of aqueous extract of C. xanthocarpa has a dose-dependent hypotensive effect in normotensive rats, suggesting that the action mechanism may be mediated through the renin-angiotensin system by AT1 receptor blockade and sympathetic autonomic response. Docking studies showed models that indicated an interaction between chlorogenic acid and quercetin with the AT1 receptor (AT1R) active site. The findings of these docking studies suggest the potential of C. xanthocarpa constituents for use as preventive agents for blood pressure.
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Secondary Ammonium Agonists Make Dual Cation-π Interactions in α4β2 Nicotinic Receptors. eNeuro 2017; 4:eN-NWR-0032-17. [PMID: 28589175 PMCID: PMC5458768 DOI: 10.1523/eneuro.0032-17.2017] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Revised: 02/28/2017] [Accepted: 03/02/2017] [Indexed: 11/21/2022] Open
Abstract
A cation-π interaction between the ammonium group of an agonist and a conserved tryptophan termed TrpB is a near universal feature of agonist binding to nicotinic acetylcholine receptors (nAChRs). TrpB is one of five residues that form the aromatic box of the agonist binding site, and for the prototype agonists ACh and nicotine, only TrpB makes a functional cation-π interaction. We report that, in addition to TrpB, a significant cation-π interaction is made to a second aromatic, TyrC2, by the agonists metanicotine, TC299423, varenicline, and nornicotine. A common structural feature of these agonists, and a distinction from ACh and nicotine, is a protonated secondary amine that provides the cation for the cation-π interaction. These results indicate a distinction in binding modes between agonists with subtly different structures that may provide guidance for the development of subtype-selective agonists of nAChRs.
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Post MR, Lester HA, Dougherty DA. Probing for and Quantifying Agonist Hydrogen Bonds in α6β2 Nicotinic Acetylcholine Receptors. Biochemistry 2017; 56:1836-1840. [PMID: 28287260 DOI: 10.1021/acs.biochem.7b00213] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Designing subtype-selective agonists for neuronal nicotinic acetylcholine receptors is a challenging and significant goal aided by intricate knowledge of each subtype's binding patterns. We previously reported that in α6β2 receptors, acetylcholine makes a functional cation-π interaction with Trp149, but nicotine and TC299423 do not, suggesting a distinctive binding site. This work explores hydrogen binding at the backbone carbonyl associated with α6β2 Trp149. Substituting residue i + 1, Thr150, with its α-hydroxy analogue (Tah) attenuates the carbonyl's hydrogen bond accepting ability. At α6(T150Tah)β2, nicotine shows a 24-fold loss of function, TC299423 shows a modest loss, and acetylcholine shows no effect. Nicotine was further analyzed via a double-mutant cycle analysis utilizing N'-methylnicotinium, which indicated a hydrogen bond in α6β2 with a ΔΔG of 2.6 kcal/mol. Thus, even though nicotine does not make the conserved cation-π interaction with Trp149, it still makes a functional hydrogen bond to its associated backbone carbonyl.
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Affiliation(s)
- Michael R Post
- Division of Chemistry and Chemical Engineering and ‡Division of Biology and Biological Engineering, California Institute of Technology , Pasadena, California 91125, United States
| | - Henry A Lester
- Division of Chemistry and Chemical Engineering and ‡Division of Biology and Biological Engineering, California Institute of Technology , Pasadena, California 91125, United States
| | - Dennis A Dougherty
- Division of Chemistry and Chemical Engineering and ‡Division of Biology and Biological Engineering, California Institute of Technology , Pasadena, California 91125, United States
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40
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Zhu J, Enamorado MF, Comins DL. Synthesis of C-4 Substituted Amido Nicotine Derivatives via Copper(I)- and (II)-Catalyzed Cross-Coupling Reactions. J Org Chem 2016; 81:11529-11534. [PMID: 27768301 DOI: 10.1021/acs.joc.6b02319] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The syntheses of seven novel amido nicotine derivatives 12-18 from (S)-nicotine are presented. (S)-Nicotine and (S)-6-chloronicotine derivatives were cross-coupled with the corresponding amides 6-10 at the C-4 position of the pyridine ring via copper(I)-mediated reactions. Derivatives 16-18 were also obtained via copper(II)-mediated reactions from (S)-nicotine containing a C-4 boronic acid pinacol ester group. The optimization of reaction conditions for both routes provided a useful method for preparing C-4 amide-containing nicotine analogs.
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Affiliation(s)
- Jiancheng Zhu
- Department of Chemistry, North Carolina State University , Raleigh, North Carolina 27695-8204, United States
| | - Monica F Enamorado
- Department of Chemistry, North Carolina State University , Raleigh, North Carolina 27695-8204, United States
| | - Daniel L Comins
- Department of Chemistry, North Carolina State University , Raleigh, North Carolina 27695-8204, United States
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41
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Qu B, Mangunuru HPR, Wei X, Fandrick KR, Desrosiers JN, Sieber JD, Kurouski D, Haddad N, Samankumara LP, Lee H, Savoie J, Ma S, Grinberg N, Sarvestani M, Yee NK, Song JJ, Senanayake CH. Synthesis of Enantioenriched 2-Alkyl Piperidine Derivatives through Asymmetric Reduction of Pyridinium Salts. Org Lett 2016; 18:4920-4923. [PMID: 27661252 PMCID: PMC10405300 DOI: 10.1021/acs.orglett.6b02401] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
An Ir-catalyzed enantioselective hydrogenation of 2-alkyl-pyridines has been developed using ligand MeO-BoQPhos. High levels of enantioselectivities up to 93:7 er were obtained. The resulting enantioenriched piperidines can be readily converted into biologically interesting molecules such as the fused tricyclic structures 5, 6, and 7 in 99:1 er, providing a novel, concise synthetic route to this family of chiral piperidine-containing compounds.
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Affiliation(s)
- Bo Qu
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Hari P R Mangunuru
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Xudong Wei
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Keith R Fandrick
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Jean-Nicolas Desrosiers
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Joshua D Sieber
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Dmitry Kurouski
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Nizar Haddad
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Lalith P Samankumara
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Heewon Lee
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Jolaine Savoie
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Shengli Ma
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Nelu Grinberg
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Max Sarvestani
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Nathan K Yee
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Jinhua J Song
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
| | - Chris H Senanayake
- Chemical Development, Boehringer Ingelheim Pharmaceuticals, Inc., Ridgefield, Connecticut 06877, United States
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Izadkhah V, Mortazavi SS, Farmany A. MWCNT modified carbon paste electrode for sensitive determination of nicotine. PARTICULATE SCIENCE AND TECHNOLOGY 2016. [DOI: 10.1080/02726351.2015.1099064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Artyushin OI, Vinogradova NM, Sharova EV, Genkina GK, Brel VK. Novel approach to the design of potential bioactive alkaloid anabasine conjugates using click chemistry methodology. HETEROATOM CHEMISTRY 2016. [DOI: 10.1002/hc.21322] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Oleg I. Artyushin
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Natalya M. Vinogradova
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Elena V. Sharova
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Galina K. Genkina
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Valery K. Brel
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
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Woodruff-Pak DS, Gould TJ. Neuronal Nicotinic Acetylcholine Receptors: Involvement in Alzheimer’s Disease and Schizophrenia. ACTA ACUST UNITED AC 2016; 1:5-20. [PMID: 17715584 DOI: 10.1177/1534582302001001002] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Nicotinic acetylcholine receptors (nAChRs) play a role in a variety of diseases of the central nervous system including Alzheimer's disease (AD) and schizophrenia. There is great interest in evaluating disease-related nAChR changes, and pharmacological treatment of nAChR deficits is a promising therapy. In AD, 7 nAChRs remain relatively stable, contrasting to 4 2 nAChRs that are lost in substantial numbers. -amyloid, a major neuropathology in AD, blocks 4 2 and 7 nAChRs. Agonists selective to 7 nAChRs are neuroprotective against amyloid. Paradoxically, 7 nAChRs may function as receptors for -amyloid. These results indicate 7 nAChR antagonists may be appropriate therapy in AD. In schizophrenia, 7 nAChRs are significantly reduced in hippocampus and neocortex. The exceptionally high rate of smoking in schizophrenics is likely a form of self-medication. Therapy with 7 nAChR agonists relieves some schizophrenic symptoms. Despite disparities in etiology and symptomatology, AD and schizophrenia share a target for therapeutic intervention— 7 nAChRs.
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Central Insulin Action Activates Kupffer Cells by Suppressing Hepatic Vagal Activation via the Nicotinic Alpha 7 Acetylcholine Receptor. Cell Rep 2016; 14:2362-74. [PMID: 26947072 DOI: 10.1016/j.celrep.2016.02.032] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2015] [Revised: 11/23/2015] [Accepted: 02/01/2016] [Indexed: 12/30/2022] Open
Abstract
Central insulin action activates hepatic IL-6/STAT3 signaling, which suppresses the gene expression of hepatic gluconeogenic enzymes. The vagus nerve plays an important role in this centrally mediated hepatic response; however, the precise mechanism underlying this brain-liver interaction is unclear. Here, we present our findings that the vagus nerve suppresses hepatic IL-6/STAT3 signaling via α7-nicotinic acetylcholine receptors (α7-nAchR) on Kupffer cells, and that central insulin action activates hepatic IL-6/STAT3 signaling by suppressing vagal activity. Indeed, central insulin-mediated hepatic IL-6/STAT3 activation and gluconeogenic gene suppression were impeded in mice with hepatic vagotomy, pharmacological cholinergic blockade, or α7-nAchR deficiency. In high-fat diet-induced obese and insulin-resistant mice, control of the vagus nerve by central insulin action was disturbed, inducing a persistent increase of inflammatory cytokines. These findings suggest that dysregulation of the α7-nAchR-mediated control of Kupffer cells by central insulin action may affect the pathogenesis of chronic hepatic inflammation in obesity.
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Zhang Y, Yanagawa Y, Saito Y. Nicotinic acetylcholine receptor-mediated responses in medial vestibular and prepositus hypoglossi nuclei neurons showing distinct neurotransmitter phenotypes. J Neurophysiol 2016; 115:2649-57. [PMID: 26936981 DOI: 10.1152/jn.00852.2015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2015] [Accepted: 02/27/2016] [Indexed: 11/22/2022] Open
Abstract
Cholinergic transmission in both the medial vestibular nucleus (MVN) and prepositus hypoglossi nucleus (PHN) plays an important role in horizontal eye movements. We previously demonstrated that the current responses mediated via nicotinic acetylcholine receptors (nAChRs) were larger than those mediated via muscarinic acetylcholine receptors (mAChRs) in cholinergic MVN and PHN neurons that project to the cerebellum. In this study, to clarify the predominant nAChR responses and the expression patterns of nAChRs in MVN and PHN neurons that exhibit distinct neurotransmitter phenotypes, we identified cholinergic, inhibitory, and glutamatergic neurons using specific transgenic rats and investigated current responses to the application of acetylcholine (ACh) using whole cell recordings in brain stem slices. ACh application induced larger nAChR-mediated currents than mAChR-mediated currents in every neuronal phenotype. In the presence of an mAChR antagonist, we found three types of nAChR-mediated currents that exhibited different rise and decay times and designated these as fast (F)-, slow (S)-, and fast and slow (FS)-type currents. F-type currents were the predominant response in inhibitory MVN neurons, whereas S-type currents were observed in the majority of glutamatergic MVN and PHN neurons. No dominant response type was observed in cholinergic neurons. Pharmacological analyses revealed that the F-, S-, and FS-type currents were mainly mediated by α7, non-α7, and both α7 and non-α7 nAChRs, respectively. These findings suggest that cholinergic responses in the major neuronal populations of the MVN and PHN are predominantly mediated by nAChRs and that the expression of α7 and non-α7 nAChRs differ among the neuronal phenotypes.
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Affiliation(s)
- Yue Zhang
- Department of Genetic and Behavioral Neuroscience, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan; Department of Physiology, Dalian Medical University, Dalian, China
| | - Yuchio Yanagawa
- Department of Genetic and Behavioral Neuroscience, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan; Japan Science and Technology Agency, Core Research for Evolutional Science and Technology (CREST), Chiyoda-ku, Tokyo, Japan; and
| | - Yasuhiko Saito
- Department of Genetic and Behavioral Neuroscience, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan; Department of Neurophysiology, Nara Medical University, Kashihara, Nara, Japan
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Crystal structure, Hirshfeld surface analysis, quantum mechanical study and spectroscopic studies of noncentrosymmetric (S)nicotiniumtrichloridozincate monohydrate complex. INORG CHEM COMMUN 2015. [DOI: 10.1016/j.inoche.2015.09.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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49
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Multiple binding sites in the nicotinic acetylcholine receptors: An opportunity for polypharmacolgy. Pharmacol Res 2015; 101:9-17. [PMID: 26318763 DOI: 10.1016/j.phrs.2015.08.018] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Revised: 08/20/2015] [Accepted: 08/20/2015] [Indexed: 12/21/2022]
Abstract
For decades, the development of selective compounds has been the main goal for chemists and biologists involved in drug discovery. However, diverse lines of evidence indicate that polypharmacological agents, i.e. those that act simultaneously at various protein targets, might show better profiles than selective ligands, regarding both efficacy and side effects. On the other hand, the availability of the crystal structure of different receptors allows a detailed analysis of the main interactions between drugs and receptors in a specific binding site. Neuronal nicotinic acetylcholine receptors (nAChRs) constitute a large and diverse family of ligand-gated ion channels (LGICs) that, as a product of its modulation, regulate neurotransmitter release, which in turns produce a global neuromodulation of the central nervous system. nAChRs are pentameric protein complexes in such a way that expression of compatible subunits can lead to various receptor assemblies or subtypes. The agonist binding site, located at the extracellular region, exhibits different properties depending on the subunits that conform the receptor. In the last years, it has been recognized that nAChRs could also contain one or more allosteric sites which could bind non-classical nicotinic ligands including several therapeutically useful drugs. The presence of multiple binding sites in nAChRs offers an interesting possibility for the development of novel polypharmacological agents with a wide spectrum of actions.
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Post MR, Limapichat W, Lester HA, Dougherty DA. Heterologous expression and nonsense suppression provide insights into agonist behavior at α6β2 nicotinic acetylcholine receptors. Neuropharmacology 2015; 97:376-82. [PMID: 25908401 DOI: 10.1016/j.neuropharm.2015.04.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2015] [Revised: 03/27/2015] [Accepted: 04/10/2015] [Indexed: 10/23/2022]
Abstract
The α6-containing subtypes of the nicotinic acetylcholine receptor (nAChR) are localized to presynaptic terminals of the dopaminergic pathways of the central nervous system. Selective ligands for these nAChRs are potentially useful in both Parkinson's disease and addiction. For these and other goals, it is important to distinguish the binding behavior of agonists at the α6-β2 binding site versus other subtypes. To study this problem, we apply nonsense suppression-based non-canonical amino acid mutagenesis. We report a combination of four mutations in α6β2 that yield high-level heterologous expression in Xenopus oocytes. By varying mRNA injection ratios, two populations were observed with unique characteristics, likely due to differing stoichiometries. Responses to nine known nAChR agonists were analyzed at the receptor, and their corresponding EC50 values and efficacies are reported. The system is compatible with nonsense suppression, allowing structure-function studies between Trp149 - a conserved residue on loop B found to make a cation-π interaction at several nAChR subtypes - and several agonists. These studies reveal that acetylcholine forms a strong cation-π interaction with the conserved tryptophan, while nicotine and TC299423 do not, suggesting a unique pharmacology for the α6β2 nAChR.
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Affiliation(s)
- Michael R Post
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 E California Blvd., Pasadena, CA 91125, USA
| | - Walrati Limapichat
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 E California Blvd., Pasadena, CA 91125, USA
| | - Henry A Lester
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Dennis A Dougherty
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 E California Blvd., Pasadena, CA 91125, USA.
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