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For: Ortega-Castro J, Adrover M, Frau J, Salvà A, Donoso J, Muñoz F. DFT Studies on Schiff Base Formation of Vitamin B6 Analogues. Reaction between a Pyridoxamine-Analogue and Carbonyl Compounds. J Phys Chem A 2010;114:4634-40. [DOI: 10.1021/jp909156m] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Number Cited by Other Article(s)
1
Gamov G, Kiselev A, Zavalishin M, Yarullin D. Formation and hydrolysis of pyridoxal-5’-phosphate hydrazones and Schiff bases: Prediction of equilibrium and rate constants. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
2
Yamabe S, Tsuchida N, Yamazaki S. A DFT study of the active role of the phosphate group of an internal aldimine in a transamination reaction. Org Biomol Chem 2022;20:5334-5341. [PMID: 35748359 DOI: 10.1039/d2ob00913g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
3
Omidinia R, Ali Beyramabadi S, Allameh S, Morsali A, Pordel M. Synthesis, characterization, DFT and antibacterial studies of a novel vitamin B6 Schiff base and its Cu(II) and Zn(II) complexes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131452] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
4
Soniya K, Chandra A. Free Energy Landscape and Proton Transfer Pathways of the Transimination Reaction at the Active site of the Serine Hydroxymethyltransferase Enzyme in Aqueous Medium. J Phys Chem B 2021;125:11848-11856. [PMID: 34696588 DOI: 10.1021/acs.jpcb.1c05864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
5
Li Z, Zhang L, Pu M, Lei M. Mechanistic Understanding of Base‐Catalyzed Aldimine/Ketoamine Condensations: An Old Story and A New Model. ASIAN J ORG CHEM 2021. [DOI: 10.1002/ajoc.202000700] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
6
Complexes of Copper and Iron with Pyridoxamine, Ascorbic Acid, and a Model Amadori Compound: Exploring Pyridoxamine's Secondary Antioxidant Activity. Antioxidants (Basel) 2021;10:antiox10020208. [PMID: 33535448 PMCID: PMC7912584 DOI: 10.3390/antiox10020208] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2021] [Revised: 01/23/2021] [Accepted: 01/26/2021] [Indexed: 12/28/2022]  Open
7
Nasrabadi M, Morsali A, Beyramabadi SA. An applied quantum-chemical model for genipin-crosslinked chitosan (GCS) nanocarrier. Int J Biol Macromol 2020;165:1229-1240. [PMID: 33038394 DOI: 10.1016/j.ijbiomac.2020.10.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 09/23/2020] [Accepted: 10/01/2020] [Indexed: 12/17/2022]
8
García-Díez G, Mora-Diez N. Theoretical Study of the Iron Complexes with Aminoguanidine: Investigating Secondary Antioxidant Activity. Antioxidants (Basel) 2020;9:E756. [PMID: 32824195 PMCID: PMC7463863 DOI: 10.3390/antiox9080756] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 08/02/2020] [Accepted: 08/11/2020] [Indexed: 12/27/2022]  Open
9
García-Díez G, Ramis R, Mora-Diez N. Theoretical Study of the Copper Complexes with Aminoguanidine: Investigating Secondary Antioxidant Activity. ACS OMEGA 2020;5:14502-14512. [PMID: 32596588 PMCID: PMC7315568 DOI: 10.1021/acsomega.0c01175] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Accepted: 05/28/2020] [Indexed: 06/11/2023]
10
Vitamin B6 and Diabetes: Relationship and Molecular Mechanisms. Int J Mol Sci 2020;21:ijms21103669. [PMID: 32456137 PMCID: PMC7279184 DOI: 10.3390/ijms21103669] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 05/21/2020] [Accepted: 05/21/2020] [Indexed: 12/14/2022]  Open
11
Quantum chemical studies of chitosan nanoparticles as effective drug delivery systems for 5-fluorouracil anticancer drug. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.112495] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
12
Mueser TC, Drago V, Kovalevsky A, Dajnowicz S. Pyridoxal 5'-phosphate dependent reactions: Analyzing the mechanism of aspartate aminotransferase. Methods Enzymol 2020;634:333-359. [PMID: 32093839 DOI: 10.1016/bs.mie.2020.01.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
13
Ramis R, Ortega-Castro J, Caballero C, Casasnovas R, Cerrillo A, Vilanova B, Adrover M, Frau J. How Does Pyridoxamine Inhibit the Formation of Advanced Glycation End Products? The Role of Its Primary Antioxidant Activity. Antioxidants (Basel) 2019;8:E344. [PMID: 31480509 PMCID: PMC6770850 DOI: 10.3390/antiox8090344] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Revised: 08/16/2019] [Accepted: 08/22/2019] [Indexed: 12/28/2022]  Open
14
Soniya K, Awasthi S, Nair NN, Chandra A. Transimination Reaction at the Active Site of Aspartate Aminotransferase: A Proton Hopping Mechanism through Pyridoxal 5′-Phosphate. ACS Catal 2019. [DOI: 10.1021/acscatal.9b00834] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
15
Reactions of aldehyde with collagen: a DFT study. Struct Chem 2018. [DOI: 10.1007/s11224-018-1131-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
16
Kaya Y. Density Functional Study of the Reaction Mechanism of Two Oxiimine Alcohol Formations and Their Novel Rearrangements. Helv Chim Acta 2016. [DOI: 10.1002/hlca.201500155] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
17
Monitoring utilizations of amino acids and vitamins in culture media and Chinese hamster ovary cells by liquid chromatography tandem mass spectrometry. J Pharm Biomed Anal 2016;117:163-72. [DOI: 10.1016/j.jpba.2015.08.036] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Revised: 08/24/2015] [Accepted: 08/27/2015] [Indexed: 11/21/2022]
18
Ding YQ, Cui YZ, Li TD. New views on the reaction of primary amine and aldehyde from DFT study. J Phys Chem A 2015;119:4252-60. [PMID: 25859816 DOI: 10.1021/acs.jpca.5b02186] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
19
Solís-Calero C, Ortega-Castro J, Frau J, Muñoz F. Nonenzymatic Reactions above Phospholipid Surfaces of Biological Membranes: Reactivity of Phospholipids and Their Oxidation Derivatives. OXIDATIVE MEDICINE AND CELLULAR LONGEVITY 2015;2015:319505. [PMID: 25977746 PMCID: PMC4419266 DOI: 10.1155/2015/319505] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/16/2014] [Revised: 03/24/2015] [Accepted: 03/25/2015] [Indexed: 01/03/2023]
20
Solís-Calero C, Ortega-Castro J, Frau J, Muñoz F. Scavenger mechanism of methylglyoxal by metformin. A DFT study. Theor Chem Acc 2015. [DOI: 10.1007/s00214-015-1649-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
21
Solís-Calero C, Ortega-Castro J, Hernández-Laguna A, Frau J, Muñoz F. A DFT study of the carboxymethyl-phosphatidylethanolamine formation from glyoxal and phosphatidylethanolamine surface. Comparison with the formation of N(ε)-(carboxymethyl)lysine from glyoxal and l-lysine. Phys Chem Chem Phys 2015;17:8210-22. [DOI: 10.1039/c4cp05360e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
22
Pandey S, Garg P, Lee S, Choung HW, Choung YH, Choung PH, Chung JH. Nucleotide biosynthesis arrest by silencing SHMT1 function via vitamin B6-coupled vector and effects on tumor growth inhibition. Biomaterials 2014;35:9332-42. [PMID: 25132602 DOI: 10.1016/j.biomaterials.2014.07.045] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2014] [Accepted: 07/23/2014] [Indexed: 01/15/2023]
23
Gökcan H, Konuklar FAS. Stereoelectronic explanations for the mechanistic details of transimination and HF elimination reactions. J Mol Graph Model 2014;51:173-83. [PMID: 24929816 DOI: 10.1016/j.jmgm.2014.05.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2013] [Revised: 05/21/2014] [Accepted: 05/22/2014] [Indexed: 11/26/2022]
24
Solís-Calero C, Ortega-Castro J, Hernández-Laguna A, Muñoz F. DFT study of the mechanism of the reaction of aminoguanidine with methylglyoxal. J Mol Model 2014;20:2202. [PMID: 24705776 DOI: 10.1007/s00894-014-2202-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2013] [Accepted: 03/04/2014] [Indexed: 11/28/2022]
25
Asadi M, Torabi S, Mohammadi K. Synthesis, characterization, and thermodynamics of some new unsymmetrical Schiff bases of salicylaldehyde with 3,4-diaminopyridine and their cobalt(III) complexes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014;122:676-681. [PMID: 24342295 DOI: 10.1016/j.saa.2013.09.098] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Revised: 09/08/2013] [Accepted: 09/26/2013] [Indexed: 06/03/2023]
26
Xia H, Mathew B, John T, Hegab H, Feng J. Microfluidic based immunosensor for detection and purification of carbonylated proteins. Biomed Microdevices 2014;15:519-30. [PMID: 23471602 DOI: 10.1007/s10544-013-9751-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
27
The efficiency of membrane transport of vitamin B6 coupled to poly(ester amine) gene transporter and transfection in cancer cells. Biomaterials 2013;34:3716-28. [DOI: 10.1016/j.biomaterials.2013.01.098] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2013] [Accepted: 01/30/2013] [Indexed: 11/22/2022]
28
C–H Activation in Pyridoxal-5′-phosphate and Pyridoxamine-5′-phosphate Schiff Bases: Effect of Metal Chelation. A Computational Study. J Phys Chem B 2013;117:2339-47. [DOI: 10.1021/jp311861p] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
29
Casasnovas R, Ortega-Castro J, Donoso J, Frau J, Muñoz F. Theoretical calculations of stability constants and pKa values of metal complexes in solution: application to pyridoxamine–copper(ii) complexes and their biological implications in AGE inhibition. Phys Chem Chem Phys 2013;15:16303-13. [DOI: 10.1039/c3cp50840d] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
30
Xiao X, Liu M, Rong C, Xue F, Li S, Xie Y, Shi Y. An Efficient Asymmetric Biomimetic Transamination of α-Keto Esters to Chiral α-Amino Esters. Org Lett 2012;14:5270-3. [DOI: 10.1021/ol302427d] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
31
Casasnovas R, Adrover M, Ortega-Castro J, Frau J, Donoso J, Muñoz F. C–H Activation in Pyridoxal-5′-phosphate Schiff Bases: The Role of the Imine Nitrogen. A Combined Experimental and Computational Study. J Phys Chem B 2012;116:10665-75. [DOI: 10.1021/jp303678n] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
32
A comparative DFT study of the Schiff base formation from acetaldehyde and butylamine, glycine and phosphatidylethanolamine. Theor Chem Acc 2012. [DOI: 10.1007/s00214-012-1263-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
33
Xue F, Xiao X, Wang H, Shi Y. The effect of benzyl amine on the efficiency of the base-catalyzed transamination of α-keto esters. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.06.023] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
34
Gökcan H, Konuklar FAS. Theoretical study on HF elimination and aromatization mechanisms: a case of pyridoxal 5' phosphate-dependent enzyme. J Org Chem 2012;77:5533-43. [PMID: 22646918 DOI: 10.1021/jo3005815] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
35
Ortega-Castro J, Frau J, Casasnovas R, Fernández D, Donoso J, Muñoz F. High- and low-spin Fe(III) complexes of various AGE inhibitors. J Phys Chem A 2012;116:2961-71. [PMID: 22369344 DOI: 10.1021/jp210188w] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
36
Vilanova B, Gallardo JM, Caldés C, Adrover M, Ortega-Castro J, Muñoz F, Donoso J. Formation of Schiff Bases of O-Phosphorylethanolamine and O-Phospho-d,l-serine with Pyridoxal 5′-Phosphate. Experimental and Theoretical Studies. J Phys Chem A 2012;116:1897-905. [DOI: 10.1021/jp2116033] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
37
Ultra sensitive affinity chromatography on avidin-functionalized PMMA microchip for low abundant post-translational modified protein enrichment. Biomed Microdevices 2011;14:67-81. [DOI: 10.1007/s10544-011-9586-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
38
Studies on molecular structure and tautomerism of a vitamin B6 analog with density functional theory. J Mol Model 2011;18:1993-2001. [PMID: 21877155 DOI: 10.1007/s00894-011-1214-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2011] [Accepted: 08/07/2011] [Indexed: 10/17/2022]
39
Caldés C, Vilanova B, Adrover M, Muñoz F, Donoso J. Understanding non-enzymatic aminophospholipid glycation and its inhibition. Polar head features affect the kinetics of Schiff base formation. Bioorg Med Chem 2011;19:4536-43. [DOI: 10.1016/j.bmc.2011.06.018] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2011] [Revised: 06/01/2011] [Accepted: 06/08/2011] [Indexed: 02/02/2023]
40
Cerqueira NMFSA, Fernandes PA, Ramos MJ. Computational Mechanistic Studies Addressed to the Transimination Reaction Present in All Pyridoxal 5′-Phosphate-Requiring Enzymes. J Chem Theory Comput 2011;7:1356-68. [DOI: 10.1021/ct1002219] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
41
Bruno A, Amori L, Costantino G. Addressing the Conformational Flexibility of Serine Racemase by Combining Targeted Molecular Dynamics, Conformational Sampling and Docking Studies. Mol Inform 2011;30:317-28. [DOI: 10.1002/minf.201000162] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2010] [Accepted: 12/22/2010] [Indexed: 11/06/2022]
42
Durak AT, Gökcan H, Konuklar FAS. Theoretical studies on the inactivation mechanism of γ-aminobutyric acid aminotransferase. Org Biomol Chem 2011;9:5162-71. [DOI: 10.1039/c1ob05146f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
43
Applications and validations of the Minnesota density functionals. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2010.11.060] [Citation(s) in RCA: 593] [Impact Index Per Article: 45.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
44
Solís-Calero C, Ortega-Castro J, Muñoz F. Reactivity of a phospholipid monolayer model under periodic boundary conditions: a density functional theory study of the Schiff base formation between phosphatidylethanolamine and acetaldehyde. J Phys Chem B 2010;114:15879-85. [PMID: 21077587 DOI: 10.1021/jp1088367] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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